Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 21,381 (bp)   Positions: 51
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
SS/JrHsdMcwi (MCW) 
.002
1.0
.943
.968
.019
.004
.001
.0
.321
--
.018
.024
.027
.0
.285
.042
--
.005
.012
.332
.349
--
--
.005
.509
.043
.356
.042
.008
.007
--
--
--
--
--
--
--
--
.105
.1
.167
.739
.38
.984
.065
.068
.009
.025
.015
.135
.028
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Marveld2
Marveld2
Marveld2
Marveld2
Marveld2
Marveld2
G
G
C
G
A
T
G
T
G
A
C
C
G
C
T
C
C
T
T
10
2
A
T
A
A
2
T
4
A
G
A
3
G
G
A
A
G
G
2
A
T
A
C
A
A
G
T
A
A
A
G
  49,772,622
  49,772,826
  49,772,873
  49,772,876
  49,772,885
  49,772,918
  49,772,932
  49,772,933
  49,772,941
  49,775,212
  49,775,238
  49,775,795
  49,775,965
  49,776,790
  49,777,830
  49,778,371
  49,778,878
  49,779,467
  49,780,262
  49,780,609
  49,780,610
  49,781,082
  49,781,423
  49,782,127
  49,782,856
  49,784,409
  49,784,723
  49,785,366
  49,785,728
  49,785,757
  49,786,081
  49,786,083
  49,786,095
  49,786,106
  49,786,123
  49,786,125
  49,786,131
  49,786,147
  49,786,602
  49,786,603
  49,787,189
  49,787,763
  49,788,007
  49,789,586
  49,790,322
  49,790,518
  49,790,610
  49,791,783
  49,792,499
  49,792,691
  49,793,557
A
T
G
A
C
A
A
A
-
5
C/-
T
A
T
A
T
2
3
C
10/-
2/-
4
-
G
G
-
G
-
G
T
A/-
3/-
G/A
G/A
A/G
A/2
G/A
3/A
2/-
A/-
C
A/-
T
2
C
A
C
T
G
G
T