Variant Visualizer (Variants)

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Sequence Annotation

Assembly Rnor_5.0

Conservation

Genes ( + )

Genes ( - )

Rnor 5.0

F344/NRrrc (Illumina) (KNAW)

.989	.776	.166	--	.018	.107	.039	.146	.006	.241	.003	.273	.001	.114	.003	.024	.151	.32	.396	.001	.02	.038	.025	.465	.449	.438	.019	.334	.081	.078	.017	.002	.016	.141	.067	.003	.031	.116	.0	.0	.001	.001	.0	.0	.021	.006	.003	.992	.003	.055	.702	.149	.048	.0	.0	.004	.003	.001	.009	.018	.0	.059	--	--	--	.113	.019	.001	.023	.734	.748	.002	.0	.002	.0	.016	.015	.01	.007	.013	--	--	--	--	.004	.046	.078	.019	.032	.204	.026	.028	.01	.01	.003	.007	.005	.078	.461	--	--	.633	.004	.027	.04	.002	.168	.005	--	--	--	.09	.771	.841	.297	.147	.052	.097	.04	.087	.124	.547	.066	.053	.277	.652	.026	.012	.024	.204	.127	.216	.187	.224	.248	.007	.272	.375	.009	--	.115	.054	.011	.005	.113	.001	.117	.1	.011	.112	.214	.096	.008	.086	.391	.091	.173	.131	.107	.144	.027	.891	.057	.012	.708	.189	.062	.256	.191	.003	.002	.266	.009	.006	.005	.006	.018	.001	.015	.937	.313	.009	--	--	--	--	--	--	--	--	--	--	.943	.994	.106	.008	.005	.19	.027	.027	.134	.032	.009	.116	.134	.0	.011	.0	.12	.443	.105	.037	.011	.012	.001	.009	.997	.004	.0	.001	.011	.318	.995	.018	.211	.027	.005	.015	.006	.935	.005	.019	--	.08	.179	.001	.01	.003	.104	.001	.042	.007	.003	.196	.263	.005	.003	.631	.006	.839	.455	.592	--	.161	.022	.122	.017	.002	.016	.001	.0	.0	.063	.0	.018	.03	.15	.056	.001	.0	.004	.154	.098	.309	.315	.074	.01	.008	.01	--	--	--	--	.016	.012	.004	.079	.284	.294	.37	.376	.064	.017	.028	.061	.072	.034	.04	.035	.233	.091	.005	.063	.0	.002	--	--	--	.009	.001	.005	.001	.0	.0	.001	.118	.132	.026	.02	.002	.645	.001	.004	.0	.0	.049	.001	.001
--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--
Glra1										Glra1										Glra1										Glra1										Glra1										Glra1										Glra1										Glra1										Glra1										Glra1										Glra1										Glra1										Glra1										Glra1										Glra1										Glra1										Glra1										Glra1										Glra1										Glra1										Glra1										Glra1										Glra1										Glra1										Glra1										Glra1										Glra1										Glra1										Glra1										Glra1										Glra1										Glra1										Glra1
T	T	A	4	T	C	A	A	C	A	G	T	5	C	T	7	T	A	A	T	T	T	G	G	2	A	A	G	A	C	T	G	C	A	A	C	A	G	T	C	C	C	C	G	T	C	A	G	C	T	T	C	3	A	T	G	A	12	C	T	T	14	C	C	136	T	T	T	C	4	12	T	G	T	A	A	C	3	C	T	C	T	G	T	C	G	C	T	A	G	C	T	A	T	T	A	A	G	T	C	3	G	T	G	A	A	G	T	T	A	A	G	A	G	A	C	T	C	C	A	C	G	G	C	C	A	G	A	T	G	G	A	T	A	G	A	C	A	G	C	T	T	A	G	A	G	T	C	C	C	T	C	C	G	G	A	A	2	A	T	A	G	G	G	A	A	3	T	C	T	T	G	A	6	4	T	C	G	T	T	T	T	C	T	A	A	A	A	A	G	C	G	6	G	T	T	G	C	2	C	15	G	T	C	T	C	C	T	A	C	3	C	C	A	T	A	G	G	G	C	C	G	2	A	2	C	G	C	A	18	A	G	6	C	A	A	T	G	C	T	T	T	C	G	T	G	T	A	T	G	C	C	A	G	C	G	A	G	A	T	C	C	C	T	G	A	A	G	C	T	A	G	G	2	2	A	T	A	G	G	C	G	G	C	A	C	C	C	A	G	A	A	T	T	T	8	G	C	C	C	A	G	G	C	A	T	T	G	A	T	T	T	T	C	T	2	A	A	T	A	T	C	C	T	T	C	T	C
40,687,406	40,687,415	40,687,857	40,689,724	40,691,216	40,691,250	40,691,541	40,691,624	40,691,852	40,692,298	40,692,652	40,693,557	40,694,066	40,696,660	40,696,992	40,697,029	40,697,214	40,697,792	40,700,235	40,701,017	40,701,112	40,701,204	40,701,391	40,701,485	40,701,487	40,701,488	40,701,522	40,701,720	40,703,152	40,703,319	40,703,727	40,704,242	40,704,317	40,704,612	40,704,676	40,704,694	40,704,751	40,704,780	40,704,852	40,704,961	40,704,963	40,704,972	40,704,982	40,705,020	40,705,178	40,705,390	40,705,553	40,705,660	40,705,957	40,706,473	40,706,673	40,706,737	40,706,770	40,708,005	40,708,099	40,708,202	40,709,503	40,710,604	40,711,343	40,711,667	40,711,928	40,711,965	40,712,004	40,712,006	40,712,089	40,712,711	40,713,206	40,713,380	40,713,456	40,713,504	40,713,526	40,714,255	40,714,727	40,715,132	40,716,026	40,717,054	40,717,227	40,717,234	40,717,253	40,717,313	40,717,479	40,717,553	40,717,618	40,717,630	40,718,031	40,718,128	40,718,233	40,718,348	40,718,353	40,718,584	40,718,661	40,718,707	40,719,687	40,719,688	40,720,500	40,720,518	40,720,591	40,720,782	40,720,917	40,721,811	40,722,461	40,722,965	40,723,158	40,723,161	40,723,162	40,723,212	40,723,779	40,724,359	40,724,587	40,724,590	40,724,598	40,724,709	40,724,872	40,724,892	40,724,999	40,725,067	40,725,087	40,725,175	40,725,254	40,725,380	40,725,688	40,725,736	40,725,912	40,725,948	40,726,145	40,726,196	40,726,272	40,726,461	40,726,521	40,726,555	40,726,709	40,726,735	40,726,972	40,726,975	40,727,088	40,727,383	40,727,552	40,727,716	40,727,971	40,728,033	40,728,104	40,728,215	40,728,474	40,728,515	40,728,595	40,728,626	40,728,864	40,729,112	40,729,208	40,729,491	40,729,499	40,729,893	40,729,923	40,730,263	40,730,294	40,730,351	40,730,599	40,730,660	40,730,665	40,731,125	40,731,459	40,731,612	40,732,012	40,732,084	40,732,275	40,732,473	40,732,587	40,732,760	40,732,847	40,733,225	40,733,226	40,733,602	40,733,952	40,734,728	40,734,730	40,734,834	40,741,453	40,741,706	40,742,081	40,742,152	40,742,558	40,742,871	40,743,478	40,743,684	40,743,755	40,743,760	40,744,507	40,744,623	40,744,698	40,744,702	40,744,705	40,744,720	40,744,763	40,744,768	40,744,864	40,745,002	40,745,281	40,746,076	40,746,143	40,746,558	40,746,568	40,746,933	40,747,109	40,747,229	40,747,238	40,747,649	40,747,728	40,747,970	40,748,089	40,748,308	40,748,325	40,748,343	40,748,375	40,749,004	40,749,076	40,749,224	40,749,449	40,749,693	40,751,427	40,751,756	40,753,001	40,753,545	40,753,707	40,753,962	40,755,723	40,756,560	40,756,641	40,756,737	40,758,574	40,759,225	40,761,940	40,762,141	40,762,592	40,763,888	40,764,273	40,764,308	40,764,471	40,764,474	40,764,917	40,765,012	40,765,091	40,765,125	40,765,151	40,765,281	40,765,534	40,765,610	40,765,943	40,766,291	40,766,498	40,766,699	40,767,371	40,767,388	40,767,454	40,767,879	40,767,893	40,768,075	40,768,082	40,768,098	40,768,139	40,768,180	40,768,414	40,768,725	40,768,761	40,768,910	40,768,969	40,769,070	40,769,101	40,769,119	40,769,492	40,769,531	40,769,969	40,770,034	40,770,137	40,770,157	40,770,160	40,770,206	40,770,463	40,770,465	40,770,789	40,770,804	40,770,818	40,770,822	40,770,932	40,771,137	40,771,143	40,771,151	40,771,163	40,771,176	40,771,178	40,771,192	40,771,193	40,771,260	40,771,266	40,771,268	40,771,270	40,771,727	40,771,752	40,771,984	40,771,985	40,772,371	40,772,914	40,772,972	40,773,229	40,775,500	40,775,666	40,775,742	40,775,914	40,775,991	40,776,328	40,777,844	40,778,086	40,778,128	40,779,474	40,779,475	40,779,924	40,780,009	40,780,011	40,780,144	40,780,766	40,781,200	40,781,429	40,781,562	40,782,215	40,782,500	40,782,814	40,783,083	40,783,880	40,785,092
-	G	G	-	C	T	G	T	A	-	A	-	-	A	C	-	C	G	7/5	C	C	C	A	G/9	2/-	A/G	-	A	C	T	C	A	T	G	G	T	G	A	C	T	A	T	T	A	C	2	G	A	2	C	17/19	3	-	G	2	A	G	-	T	C	C	-	T	T	-	C	C	C	A	-	-	-	A	A	C	G	G	-	7	C	G	C	A	G	10	A	A	C	G	A	T	C	G	A	C	T	T	T	C	T	-	A	10	2	T	T	A	C	C	G	G	A	G	A	G	T	A	T	T	T	A	A	2	A	T	G	T	G	A	A	5	G	C	G	C	T	A	3	A	A	C	C	G	C	G	A	C	3	T	T	C	5	9	A	A	G	G	-	C	C	G	A	C	T	2	G	-	C	A	2	32	A	G	6/-	4/-	C	G	A	C	2	G	C	4	G	-	G	A/17	5	G	A	3	27	-	A	C	C	A	T	-	2	-	17	C	T	G	A	G	G	10	A	3/-	C/16	A	G	C	G	A	A	C	T	-	A	-	G	-	A	5	T	G	18/-	G	2	-	A	2	G	A	A	T	C	A	G	T	A	C	A	C	G	C	17	T	A	C	A	G	A	G	C	G	C	T	T	4	C	A	G	T	A	T	G	G	T	A	-	-	T	2	T	T	5	2	2	7/5	T	G	G	G	A	G	A	G	11	6	16	15	-	A	-	G	T	2	A	GT/3	T	G	33	C	C	G	C	C	C	-	G	C	-	C	C	-	T	C	T	T	G	A	T	C	G