Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 175,046 (bp)   Positions: 428
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
.0
.0
.0
.001
.01
.004
.089
.004
.087
.0
.0
.005
.0
.002
.074
.002
.0
.001
.001
.007
.005
.302
.377
.182
.063
.008
.0
.001
.103
.006
.735
.887
1.0
.003
.015
.002
.002
.0
.033
.002
.0
.127
.998
.656
.078
.068
.086
.02
.079
.072
.005
.303
.01
.206
.006
.283
.035
.072
--
--
--
.001
.025
.147
.017
.008
.558
.007
.124
.036
.005
.004
.179
.181
.191
.138
.0
.021
.003
.002
.001
.002
.011
--
.01
.153
.131
.013
.011
.249
.445
.278
.287
.001
.0
.0
.001
--
.0
.025
.006
.978
.05
.019
.019
.007
--
.013
.005
.061
.815
.594
.001
.001
.005
.011
.0
.009
.023
.197
.091
.042
.066
.533
.161
.026
.009
.002
.005
.0
.028
.001
.294
.017
.047
.015
.003
.002
.001
.011
.004
.032
.01
.335
.0
.032
.0
.237
--
--
--
--
--
.002
.002
.298
.01
.15
.001
.03
.001
.029
.269
.358
.074
.0
.134
.034
.148
.153
.158
.161
.146
.005
.002
.0
.005
.965
--
--
--
--
--
--
--
--
--
--
.902
.013
.032
.001
.025
.223
.007
.0
.001
.004
.005
--
.936
.008
.002
.001
.0
.003
.002
.006
.125
.038
.015
.219
.001
.035
.005
.005
.252
.142
.005
.284
.006
.0
.001
.027
.153
.0
.001
.003
.995
.021
.0
.198
.374
.382
.021
.352
.005
.0
.924
--
.128
.664
.812
.001
.002
.009
.003
.004
.001
.0
.019
.0
.01
.004
.015
.015
.073
.0
.001
.002
.0
.001
.005
--
--
.017
.001
.001
.048
.041
.077
.703
.061
.111
.005
.018
.189
.22
.107
.188
.118
.007
.392
.051
.013
.137
.08
.099
.0
.006
--
--
--
.09
.438
.02
.001
.618
.902
.902
.612
.091
.0
.006
.037
.101
.195
.196
.201
.003
.033
.109
.35
.757
.012
.021
.0
.023
.053
.053
.0
.251
.006
.0
.001
.005
.0
.0
.001
.036
.008
.006
.001
.0
.004
.0
.095
.982
.0
.001
.001
.0
.002
.0
.004
.123
.057
.001
.0
.0
.001
.002
.322
.001
.058
.007
.002
.0
.015
.0
.001
.075
.0
.034
.001
.007
.0
.997
.002
.004
1.0
.0
.035
.0
.007
.003
.968
.012
.046
.597
.006
.004
.0
.001
.001
.0
.0
.002
.999
.224
.001
.132
.004
.0
.879
.872
.003
.0
.017
.534
.005
.026
.771
.75
.056
.08
.082
.006
.018
.011
.001
.23
.034
.007
.038
.045
.158
.249
.001
.003
.0
.005
.288
.002
.001
.01
.0
.001
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
F13a1
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
G
T
T
A
G
T
C
G
A
T
G
T
A
C
A
A
C
A
A
G
T
T
C
C
T
T
3
A
G
C
G
G
A
C
C
G
G
A
T
T
G
G
A
C
A
C
C
A
G
G
T
G
A
A
A
G
C
G
G
G
G
G
T
T
A
C
T
G
T
A
A
G
C
C
10
14
4
C
C
G
C
C
G
C
G
G
T
C
T
G
C
A
T
4
A
T
C
T
C
T
C
G
T
G
C
T
T
A
A
A
G
A
T
A
T
G
G
C
A
5
C
C
A
G
A
C
G
C
C
C
G
G
T
T
T
T
T
C
G
G
A
A
A
T
A
A
G
A
A
A
G
5
G
G
G
A
A
T
G
C
T
T
T
T
A
A
T
G
T
T
T
T
4
C
T
T
C
A
T
C
T
A
A
G
A
A
T
T
12
T
T
4
C
A
G
A
T
A
C
2
G
T
A
T
T
T
10
T
C
A
C
T
C
A
C
A
A
T
G
G
T
G
C
C
T
G
T
T
G
A
A
A
T
G
A
C
T
T
C
8
A
A
C
A
T
G
A
A
2
G
G
A
A
T
4
26
C
50
G
C
A
C
A
2
26
T
G
G
A
C
C
A
G
A
T
C
G
A
T
A
C
G
T
C
C
A
T
G
T
G
A
C
A
T
C
A
C
T
3
2
A
6
G
T
T
C
A
A
A
C
C
A
5
T
C
G
G
4
A
G
G
4
C
A
C
T
C
G
T
C
A
C
C
A
G
A
2
T
C
G
T
T
A
T
G
G
G
G
C
A
C
C
G
12
A
A
A
G
G
T
G
A
T
C
C
T
A
C
C
G
A
C
T
T
C
C
2
2
T
6
C
4
T
A
C
G
C
T
C
12
4
G
C
T
A
G
G
G
A
T
T
C
C
T
C
C
A
G
T
T
G
T
T
T
T
T
10
8
C
G
G
G
C
G
A
A
C
C
  30,406,571
  30,406,608
  30,406,618
  30,406,866
  30,409,132
  30,409,330
  30,409,432
  30,409,641
  30,409,676
  30,409,884
  30,410,017
  30,410,277
  30,410,294
  30,410,305
  30,410,570
  30,410,873
  30,410,912
  30,411,039
  30,411,041
  30,411,424
  30,411,515
  30,411,543
  30,411,582
  30,411,779
  30,411,825
  30,412,142
  30,412,294
  30,413,058
  30,413,140
  30,413,249
  30,413,762
  30,413,974
  30,414,030
  30,414,629
  30,414,954
  30,415,242
  30,415,403
  30,415,563
  30,415,577
  30,415,627
  30,416,029
  30,416,191
  30,416,229
  30,416,257
  30,416,896
  30,416,897
  30,417,060
  30,417,123
  30,417,148
  30,417,149
  30,417,238
  30,417,430
  30,417,614
  30,417,660
  30,417,729
  30,418,028
  30,418,443
  30,418,673
  30,418,843
  30,418,847
  30,418,851
  30,420,718
  30,422,508
  30,424,378
  30,424,401
  30,425,249
  30,425,743
  30,426,082
  30,426,571
  30,426,682
  30,427,002
  30,427,013
  30,427,056
  30,427,057
  30,427,073
  30,427,099
  30,427,125
  30,427,491
  30,430,869
  30,430,878
  30,431,127
  30,431,240
  30,431,618
  30,433,878
  30,434,028
  30,434,830
  30,434,982
  30,435,017
  30,435,045
  30,435,736
  30,436,402
  30,436,405
  30,436,408
  30,436,710
  30,436,715
  30,436,717
  30,437,018
  30,440,460
  30,440,834
  30,440,837
  30,441,925
  30,442,602
  30,443,661
  30,445,694
  30,446,492
  30,446,512
  30,448,242
  30,448,990
  30,449,161
  30,449,362
  30,450,289
  30,450,988
  30,451,070
  30,452,183
  30,452,345
  30,452,513
  30,452,649
  30,452,754
  30,453,457
  30,453,690
  30,453,982
  30,455,901
  30,456,355
  30,456,860
  30,457,136
  30,458,313
  30,458,546
  30,458,565
  30,458,600
  30,458,863
  30,459,246
  30,459,569
  30,459,892
  30,460,089
  30,460,111
  30,460,692
  30,460,856
  30,460,946
  30,460,996
  30,461,228
  30,461,825
  30,462,119
  30,462,232
  30,462,279
  30,462,516
  30,462,661
  30,462,821
  30,462,863
  30,463,200
  30,463,242
  30,463,250
  30,463,256
  30,463,294
  30,463,795
  30,464,152
  30,464,372
  30,464,485
  30,464,616
  30,464,871
  30,465,133
  30,466,062
  30,466,070
  30,466,076
  30,466,080
  30,466,266
  30,466,611
  30,466,931
  30,467,092
  30,467,370
  30,467,372
  30,467,374
  30,467,376
  30,467,406
  30,467,728
  30,468,970
  30,469,156
  30,469,188
  30,469,538
  30,471,269
  30,471,339
  30,471,607
  30,471,621
  30,472,325
  30,472,363
  30,473,082
  30,474,420
  30,474,503
  30,475,474
  30,476,217
  30,478,263
  30,478,268
  30,478,668
  30,478,733
  30,479,886
  30,479,940
  30,480,426
  30,481,901
  30,482,123
  30,482,385
  30,482,416
  30,483,244
  30,483,326
  30,483,832
  30,484,242
  30,485,074
  30,485,414
  30,485,521
  30,485,878
  30,485,957
  30,486,042
  30,486,110
  30,486,498
  30,486,760
  30,486,786
  30,486,795
  30,487,116
  30,487,204
  30,489,513
  30,489,770
  30,489,979
  30,490,350
  30,492,196
  30,492,604
  30,492,630
  30,492,754
  30,493,214
  30,493,353
  30,493,492
  30,494,006
  30,494,514
  30,494,804
  30,496,387
  30,497,825
  30,497,826
  30,497,993
  30,498,383
  30,498,975
  30,499,334
  30,499,661
  30,499,938
  30,502,369
  30,502,583
  30,502,829
  30,506,183
  30,507,049
  30,507,768
  30,507,793
  30,508,394
  30,508,689
  30,509,098
  30,509,315
  30,511,189
  30,511,444
  30,511,719
  30,512,347
  30,512,364
  30,513,671
  30,513,889
  30,514,525
  30,514,850
  30,514,893
  30,514,894
  30,514,956
  30,515,147
  30,515,152
  30,515,265
  30,516,156
  30,516,782
  30,516,894
  30,516,982
  30,516,998
  30,517,256
  30,517,743
  30,518,145
  30,518,661
  30,519,004
  30,519,014
  30,519,113
  30,519,248
  30,519,255
  30,519,312
  30,519,324
  30,519,786
  30,520,450
  30,520,578
  30,521,344
  30,521,441
  30,522,389
  30,522,542
  30,522,565
  30,522,888
  30,522,896
  30,522,900
  30,523,002
  30,523,049
  30,523,270
  30,523,365
  30,523,883
  30,523,993
  30,523,994
  30,526,338
  30,526,502
  30,526,583
  30,526,831
  30,527,448
  30,527,460
  30,527,490
  30,527,491
  30,527,500
  30,527,639
  30,527,903
  30,527,966
  30,528,017
  30,528,649
  30,529,549
  30,531,798
  30,536,618
  30,539,937
  30,539,940
  30,540,181
  30,540,205
  30,540,368
  30,540,702
  30,541,206
  30,542,496
  30,542,852
  30,542,883
  30,542,917
  30,542,983
  30,542,995
  30,544,173
  30,544,191
  30,544,261
  30,544,329
  30,544,351
  30,544,423
  30,544,753
  30,545,681
  30,545,909
  30,546,124
  30,546,295
  30,546,403
  30,546,482
  30,546,525
  30,546,728
  30,547,075
  30,548,492
  30,549,250
  30,549,325
  30,549,500
  30,549,719
  30,551,036
  30,551,047
  30,551,158
  30,552,107
  30,552,430
  30,552,544
  30,553,203
  30,553,922
  30,554,090
  30,554,712
  30,554,924
  30,555,198
  30,555,217
  30,555,286
  30,555,715
  30,556,511
  30,557,525
  30,557,693
  30,558,195
  30,558,788
  30,559,702
  30,561,144
  30,561,881
  30,562,897
  30,565,044
  30,565,607
  30,565,661
  30,566,250
  30,570,296
  30,570,702
  30,571,507
  30,571,718
  30,571,911
  30,572,174
  30,572,360
  30,572,487
  30,572,502
  30,572,597
  30,573,400
  30,573,488
  30,573,600
  30,574,635
  30,574,762
  30,574,922
  30,574,950
  30,575,450
  30,575,514
  30,575,888
  30,576,156
  30,576,382
  30,576,492
  30,576,955
  30,576,962
  30,577,031
  30,577,064
  30,577,066
  30,577,103
  30,577,440
  30,577,636
  30,577,922
  30,578,019
  30,578,151
  30,578,444
  30,578,503
  30,578,710
  30,578,756
  30,578,787
  30,579,277
  30,579,363
  30,579,457
  30,579,956
  30,580,540
  30,581,337
  30,581,341
  30,581,346
  30,581,358
  30,581,389
C
C
C
G
A
-
T
A
C
C
A
C
G
T
G
G
T
2
4
C
C
3
T
2
G
G
-
T
2
T
A
A
C
T
T
A
A
G
-
3
A
T
C
T
G
T
A
G
A
A
C
C
G
G
C
A
T
T
A
A
A
C
C
-
-
C/3
?
T
-
G
C
C
2
4
-
-
-
T
T
A
2
T
T
T
A
A
A
T
C
3
2
T
-
-
C
C
G
-
C/A
A
A
A
C
2
T
-
C
G
C
2
A
T
C
T
C
2
A
G
G
-
T
T
G
A
G
T
A
T
T
A
A
T
A
C
G
C
C
4
A
C
G
-
G
C
T
T
T
C
6
G
A
-
T
A
A
G
G
A
A
T
C
T/15
T/2
T/2
C
G
-
20
C
C
C
C
-
5
C
G
T
G
C
T
C
2
G
2
T
C
-
G
-
C
G
-
T
13
C
T
C
C
3
-
A
C
G
A
C
A
-
C
T
C
G
G
A
C
T
C
G
C
A
A
C
T
T
6
C
C
C
A
T
G
9
G
A
A
AT/3
T
C
C
T
-
G
G
G
-
A
T
G
G
-
A
-
G
3
G
-
26/-
G
50/-
A
T
G
T
T
-
-
13
C
C
G
T
T
G
T
G
2
A
A
G
-
T
-
-
T/5
T
G
G
C
A
G
A
T
A
G
C
5
G
G
A
3/-
2/-
-
-
A
C
C
2
3
9
3
T
G
G
-
G
T
A
2
4/-
-
G/3
C
4/-
A
T
-
C
A
A
C
G
G
T
2
G
C
G
-
C
T
A
C
C
G
11
A
A
A
A
T
G
T
T
C
-
C
G
G
A
C
C
3
G
C
T
T
G
G
T
T
T
T
A
C
C
T
T
2/-
-
C
6/-
A
-
C
G
A
A
T
A
2
-
-
T
T
C
G
2
A
A
G
C
C
T
T
A
A
T
T
A
C
C
A
C
A
C
C
3
10/-
-
A
A
C
A
G
A
14
G
T
T