Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 11,703 (bp)   Positions: 107
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
SHR/NCrlPrin (KNAW) 
--
.0
.001
.009
.006
.003
.006
.0
.002
.003
.0
.097
.01
.003
.001
.0
.004
.158
.029
.0
.0
.183
.01
.009
.0
.002
.025
.083
.047
.212
.003
.012
.156
.193
.356
.029
.007
.011
.005
.241
.388
.339
.16
.006
.006
.013
.005
.089
.063
.124
.112
.004
.003
.004
.007
.006
--
.847
.008
.004
.0
.164
.201
.053
.053
.004
.002
.004
--
.008
.005
.005
.044
.046
.008
.02
.0
.013
.011
.164
.431
.028
.048
.003
.003
.001
.053
.053
.221
--
--
--
--
--
--
--
--
--
--
.035
.036
.001
.0
.0
--
.005
--
Dnase1l3
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
6
C
A
C
A
C
T
T
G
G
C
C
C
C
T
3
G
15
G
A
A
A
A
G
T
T
A
2
G
T
T
C
2
G
G
A
C
A
C
T
C
T
T
G
A
T
A
T
G
A
A
C
C
T
G
G
C
C
G
A
G
T
G
G
A
C
T
T
T
G
G
C
T
C
C
T
A
G
C
A
G
T
A
T
G
C
G
A
G
T
T
A
G
A
G
T
T
T
G
C
G
T
T
T
T
2
A
  21,920,498
  22,676,704
  22,676,712
  22,677,068
  22,677,069
  22,677,087
  22,677,137
  22,677,225
  22,677,257
  22,677,267
  22,677,307
  22,677,382
  22,677,393
  22,677,462
  22,677,551
  22,677,567
  22,677,637
  22,678,051
  22,678,174
  22,678,357
  22,678,425
  22,678,460
  22,678,626
  22,678,627
  22,678,727
  22,678,834
  22,678,944
  22,678,951
  22,678,979
  22,679,043
  22,679,059
  22,679,064
  22,679,070
  22,679,228
  22,679,255
  22,679,285
  22,679,358
  22,679,359
  22,679,397
  22,679,442
  22,679,453
  22,679,666
  22,679,675
  22,679,822
  22,679,852
  22,680,073
  22,680,092
  22,680,138
  22,680,145
  22,680,202
  22,680,302
  22,680,362
  22,680,400
  22,680,461
  22,680,558
  22,680,690
  22,682,461
  22,682,830
  22,682,856
  22,682,889
  22,682,968
  22,683,019
  22,683,029
  22,683,037
  22,683,047
  22,683,118
  22,683,187
  22,683,278
  22,683,517
  22,683,651
  22,683,657
  22,683,716
  22,683,886
  22,683,887
  22,684,025
  22,684,229
  22,684,729
  22,684,952
  22,684,958
  22,685,029
  22,685,065
  22,685,243
  22,685,438
  22,685,522
  22,686,288
  22,686,295
  22,686,891
  22,686,893
  22,686,968
  22,687,084
  22,687,118
  22,687,204
  22,687,207
  22,687,208
  22,687,241
  22,687,337
  22,687,352
  22,687,380
  22,687,413
  22,687,701
  22,687,758
  22,687,918
  22,687,974
  22,688,045
  22,689,122
  22,689,221
  22,700,749
-
A
G
T
G
A
C
C
A
A
T
T
-
T
C
-
A
-
A
G
G
G
C
A
A
C
G
-
A
4
C
4
-
A
A
G
T
G
T
C
G
C
C
A
G
C
G
C
A
G
G
T
T
C
A
C
T
T
T
G
C
3
A
A
-
T
C
4
C
A
A
T
G
T
G
C
G
A
-
T
A
A
3
C
C
G
C
T
C
C
G
3
C
T
-
C
A
G
T
T
T
C
C
C
G
-
T