Variant Visualizer (Variants)

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Sequence Annotation

Assembly Rnor_5.0

Conservation

Genes ( + )

Genes ( - )

Rnor 5.0

F344/NRrrc (Illumina) (KNAW)

.041	.293	.226	.008	.092	.203	.001	.001	.0	.005	.046	.026	.009	.114	.12	.088	.002	--	--	--	.082	.14	.687	.952	.997	.999	.92	.03	.986	.265	.003	.004	.943	.004	.001	.023	.006	.004	.05	--	--	--	--	--	--	--	--	--	--	--	--	--	.002	.563	.75	--	.008	.017	.599	.01	.008	.095	.006	.008	.001	.556	.217	.009	.951	.949	--	--	--	--	--	--	--	--	--	.0	.319	.0	.001	.003	.121	.0	.002	.017	.002	.046	.229	.009	.021	.009	.023	.501	.195	.0	.001	.001	.958	.203	.013	.006	.682	.433	.568	.008	.043	--	.001	.068	.008	.001	.142	.036	.325	.046	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	.186	.002	.496	.001	.001	.008	.995	.801	.002	.001	.041	.182	.003	.001	.035	--	.001	.05	.001	.106	.958	.777	.004	--	--	--	.016	.0	.004	.005	.001	.001	.018	.001	.018	.04	.973	.219	.012	.0	.008	.002	.001	.009	.001	.762	.129	.001	.001	--	--	--	--	--	--	--	--	.048	.023	.167	.127	.019	.007	.041	.211	.001	.414	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	.011	.004	.019	.001	.003	.001	.062	.001	.193	.0	.002	.534	.001	.05	.047	.0	.037	.076	.068	.223	.0	.008	.018	.003	.117	.095	.109	.005	.217	.001	.096	.06	.002	.001	.007	.057	.756	.801	.001	.001	.013	.004	.091	.01	.0	.0	.07	.575	.005	.0	.998	.817	.0	.437	.019	--	--	.009	.024	.067	.071	.015	--	--	.0	.006	.004	.004	.002	.002	--	--	--	--	--	--	--	--	--	.001	.001	.215	.138	.023	.042	.125	.102	.089	.011	.0	.017	.217	.001	.034	.009	.031	.033	.001	.034	.091	.008	.001	.002	.052	.0	--	.001	.21	.018	.654	1.0	.998	.0	.001	.001	.0	.018	.0	.0	.001	.016	.005	.047	.151	.167	.262	.002	.714	.011	.077	.002	.125	.005	.041	.001	.0	.004	.694	.006	.008	.03	.002	--	.008	.676	.678	.026	.062	--	--	.271	.3	.097	.018
--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--
Cwc27										Cwc27										Cwc27										Cwc27										Cwc27										Cwc27										Cwc27										Cwc27										Cwc27										Cwc27										Cwc27										Cwc27										Cwc27										Cwc27										Cwc27										Cwc27										Cwc27										Cwc27										Cwc27										Cwc27										Cwc27										Cwc27										Cwc27										Cwc27										Cwc27										Cwc27										Cwc27										Cwc27										Cwc27										Cwc27										Cwc27										Cwc27										Cwc27										Cwc27										Cwc27										Cwc27										Cwc27										Cwc27										Cwc27										Cwc27										Cwc27
A	G	G	A	C	T	A	T	T	C	4	G	T	T	6	C	T	4	18	16	A	2	T	G	T	A	G	G	T	4	2	A	T	T	A	C	G	C	T	A	A	T	T	C	C	A	T	T	T	G	G	A	C	G	C	C	C	T	C	T	A	T	A	C	T	C	A	T	2	T	G	G	C	G	G	T	G	G	C	T	A	A	T	G	C	A	A	T	G	T	C	A	A	G	4	G	T	A	3	2	T	C	T	C	3	T	A	G	G	T	T	2	T	C	C	G	3	T	C	14	A	G	C	A	A	G	15	C	G	G	T	G	C	4	A	G	A	G	A	A	A	G	C	C	A	A	G	G	G	A	T	C	C	T	A	T	G	C	G	C	3	A	C	C	G	T	G	G	T	T	C	T	C	A	C	C	G	T	C	C	C	G	A	C	A	2	A	A	T	C	T	12	T	2	A	A	G	4	A	A	3	8	T	41	3	C	T	C	C	T	G	A	C	G	T	T	T	T	12	T	T	G	G	T	T	T	C	A	G	T	G	A	T	C	A	A	T	A	G	C	C	C	C	G	C	T	T	C	T	C	T	A	T	T	A	G	G	T	19	T	A	A	T	3	C	4	T	A	A	C	T	C	T	G	C	A	T	6	C	C	C	T	C	T	A	20	18	T	A	2	A	G	A	T	G	C	G	T	C	T	T	G	G	G	T	T	A	T	A	C	T	T	2	T	A	12	10	A	G	2	C	C	T	C	C	G	C	C	G	G	G	C	C	C	T	A	C	T	G	T	G	T	T	G	C	C	A	T	G	T	T	T	A	5	C	A	A	T	C	C	C	G	A	G	28	A	T	G	C	16	C	T	T	A	T	A	G	T	5	C	A	C	A	T	C	2	C	T	C	A	T	G	G	T	A	A	T	T	T	T	G	2	G	16	14	C	A
53,846,622	53,847,085	53,847,932	53,848,678	53,851,953	53,852,126	53,852,172	53,853,113	53,853,337	53,855,089	53,855,560	53,856,122	53,856,857	53,859,599	53,860,291	53,861,280	53,867,376	53,869,552	53,869,566	53,869,568	53,871,465	53,872,389	53,873,866	53,874,484	53,874,510	53,874,519	53,874,525	53,874,545	53,874,690	53,874,895	53,875,552	53,875,554	53,875,740	53,878,392	53,878,681	53,879,026	53,879,231	53,879,750	53,879,810	53,879,938	53,880,596	53,880,616	53,880,928	53,881,480	53,881,897	53,883,147	53,883,437	53,884,017	53,884,019	53,884,132	53,884,234	53,884,600	53,885,218	53,885,572	53,885,696	53,886,595	53,886,660	53,886,973	53,887,319	53,887,453	53,887,655	53,887,726	53,887,750	53,887,755	53,887,908	53,888,664	53,888,802	53,889,617	53,889,949	53,889,950	53,889,991	53,890,101	53,890,187	53,890,376	53,891,619	53,891,781	53,891,949	53,891,953	53,892,350	53,893,916	53,894,327	53,894,389	53,894,807	53,895,108	53,895,155	53,895,452	53,896,796	53,896,800	53,896,830	53,897,410	53,897,508	53,897,906	53,898,488	53,898,582	53,898,668	53,899,552	53,899,896	53,900,005	53,900,685	53,900,686	53,901,428	53,901,635	53,902,343	53,902,381	53,902,582	53,902,902	53,903,235	53,903,276	53,904,351	53,904,838	53,905,375	53,905,493	53,905,572	53,905,655	53,905,720	53,906,330	53,906,590	53,906,701	53,906,776	53,906,823	53,907,115	53,907,221	53,907,249	53,907,554	53,907,564	53,908,293	53,908,358	53,909,184	53,909,300	53,909,491	53,910,096	53,910,116	53,910,240	53,910,252	53,910,274	53,910,354	53,911,223	53,911,264	53,911,288	53,911,292	53,911,866	53,911,944	53,912,681	53,912,862	53,912,955	53,913,056	53,913,441	53,913,467	53,913,812	53,914,142	53,914,482	53,915,487	53,915,627	53,915,995	53,916,985	53,917,445	53,917,685	53,917,930	53,918,051	53,919,044	53,920,723	53,921,443	53,922,739	53,923,006	53,923,455	53,923,785	53,924,259	53,924,381	53,924,923	53,925,785	53,928,914	53,928,931	53,931,181	53,931,319	53,931,603	53,931,611	53,932,215	53,932,297	53,932,309	53,932,464	53,934,961	53,935,725	53,936,958	53,938,739	53,939,486	53,940,625	53,942,756	53,944,216	53,944,405	53,944,863	53,945,417	53,945,874	53,946,161	53,948,661	53,948,662	53,949,936	53,949,983	53,950,068	53,950,123	53,950,142	53,950,144	53,950,151	53,950,284	53,950,646	53,951,100	53,951,541	53,952,167	53,952,582	53,952,589	53,952,893	53,952,898	53,953,080	53,953,353	53,953,693	53,953,700	53,953,758	53,953,762	53,953,766	53,953,770	53,954,595	53,954,597	53,954,800	53,954,806	53,955,031	53,955,042	53,955,441	53,955,752	53,956,234	53,956,258	53,956,722	53,957,192	53,957,203	53,957,429	53,957,680	53,957,732	53,958,251	53,958,282	53,958,291	53,958,356	53,958,359	53,958,515	53,958,639	53,958,646	53,958,677	53,959,003	53,959,008	53,959,222	53,959,540	53,960,167	53,961,142	53,961,316	53,961,492	53,961,527	53,962,096	53,962,556	53,962,610	53,962,686	53,962,955	53,963,115	53,963,208	53,963,295	53,963,952	53,964,077	53,964,203	53,964,242	53,964,862	53,965,227	53,965,434	53,965,499	53,965,678	53,966,694	53,967,085	53,967,701	53,968,322	53,968,645	53,969,424	53,969,970	53,970,033	53,970,066	53,970,104	53,970,135	53,970,438	53,971,778	53,972,441	53,972,482	53,973,380	53,973,382	53,973,568	53,973,735	53,977,468	53,977,469	53,977,937	53,977,938	53,979,064	53,979,851	53,981,227	53,982,525	53,983,417	53,983,430	53,983,838	53,984,874	53,985,392	53,985,747	53,986,982	53,987,441	53,987,589	53,988,108	53,988,255	53,989,748	53,989,758	53,990,060	53,990,063	53,993,067	53,993,068	53,997,877	53,998,578	53,998,580	54,003,489	54,004,144	54,004,146	54,004,155	54,004,157	54,006,132	54,008,721	54,009,405	54,010,663	54,011,231	54,011,232	54,011,837	54,012,438	54,012,530	54,013,714	54,014,730	54,014,731	54,015,650	54,015,824	54,018,205	54,018,211	54,018,326	54,019,207	54,019,441	54,020,281	54,020,603	54,020,833	54,020,913	54,020,939	54,021,279	54,021,512	54,022,449	54,022,452	54,022,489	54,022,757	54,023,236	54,023,328	54,023,449	54,023,778	54,024,053	54,025,289	54,026,413	54,026,537	54,027,253	54,027,643	54,028,027	54,029,062	54,029,072	54,029,601	54,029,692	54,030,327	54,030,818	54,031,503	54,032,069	54,033,080	54,033,452	54,034,413	54,034,541	54,035,252	54,035,285	54,035,580	54,035,583	54,036,109	54,037,221	54,038,118	54,038,972	54,039,869	54,040,177	54,040,370	54,040,837	54,041,287	54,042,192	54,042,508	54,042,708	54,043,202	54,043,433	54,043,516	54,043,724	54,044,148	54,044,826	54,044,929	54,044,943	54,045,068	54,046,069	54,046,388	54,046,525	54,046,864	54,046,866	54,047,762	54,048,589
G	11	A	G	G	C	G	25	C	T	4/-	A	C	C	-	T	C	-	18/-	-	3	-	C	C	-	2	T	-	G	-	-	C	C	C	C	T	A	T	G	G	C	C	A	A	A	G	G	C	G	C	A	G	T	A	T	T	T	C	G	A	G	G	-	T	C	5	T	C	2/-	-	-	T	T	A	A	C	2	T	T	C	C	G	A	A	T	-	G	A	T	A	G	G	C	A	-	A	C	G	3/-	-	4	T	A	T	-	G	-	2	T	C	C	-	G	A	4	T	-	G	T	14/-	T	A	T	T	G	A	15/-	-	A	C	C	A	-	-	C	T	5	A	2	6	G	A	-	T	G	T	A	A	C	A/5	C	G	T	C	G	C	C	A	A	A	-	T	A	A	7	C	A	A	C	-	3/5	3	A	2	T	A	A	C	2	T	T	2	-	T	-	-	2	G	C	T	5/9	12/-	-	2/-	A/-	T	A	-	G	-	-	-	C	-	-	C/2	C	2	A	C	C	G	T	A	C	G	G	G	-	G	C	A	A	G	A	C	T	G	T	C	A	G	-	T	T	G	A	G	T	T	T	-	T	C	T	C	G	T	A	2	C	G	A	-	6	A	A	A	-	C	T	C	G	-	T	-	G	T	G	T	A	T	C	A	T	T	C	6/-	A	T	T	C	T	T/17	A/4	20/-	18/-	A	-	2/-	A/-	G/2	-	C	A	T	A	3	A	C	C	A	A	A	C	C	G	C	T	T	T/-	A	2/-	T/-	16	12/-	10/-	C	-	-	-	-	C	2	T	A	T	T	A	A	T	T	2	5	5	-	3	C	T	C	A	C	G	A	G	2	C	G	A	G	C	C	G	-	T	G	G	A	17	T	C/2	3	C	-	-	G	C	A	T	-	T	C	C	G	T/4	5	5	C	-	T	T	T	G	C	T	-	G	C	G	3	3	T	A	C	G	C	-	C	C	C	A	2/-	G/-	16/-	14/-	T	G