Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 32,247 (bp)   Positions: 120
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
MNS/Gib (KNAW) 
.003
.07
.078
.232
.0
.001
.0
.001
.001
.0
.007
.001
.031
.0
.137
.055
.01
.257
.0
.074
.0
.752
.463
.059
.203
.111
.007
.022
.007
.061
.113
.619
.001
.001
.0
.0
.001
.008
.004
.039
.001
.006
.023
.01
.0
.024
.807
.0
.104
.0
.003
.0
.023
.998
.996
.0
.004
.0
.0
.0
.0
.0
.0
.0
.123
.002
.997
.0
.079
.07
.003
.001
.0
.962
.0
.0
.0
.992
.006
.0
.004
.014
1.0
.002
.0
.0
.001
.996
.003
.0
.001
.001
.0
.0
.004
.002
.003
.001
.0
.01
.011
.001
.008
.0
.058
.279
.0
.128
.0
.035
.0
.219
.007
.001
.144
.002
.005
.031
.0
.0
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Aldh1a3
Aldh1a3
Aldh1a3
Aldh1a3
Aldh1a3
Aldh1a3
Aldh1a3
Aldh1a3
Aldh1a3
Aldh1a3
Aldh1a3
Aldh1a3
2
G
G
C
C
A
T
A
C
A
A
A
3
G
C
C
G
A
G
C
G
T
A
G
A
A
C
C
G
G
G
C
A
C
T
G
T
A
T
G
A
C
T
C
G
T
A
T
T
A
A
C
T
C
A
T
G
C
A
A
A
C
T
C
A
A
C
2
2
2
6
G
T
G
A
C
T
A
9
T
G
C
C
G
G
G
G
C
A
G
T
C
T
G
A
2
C
T
A
T
G
C
G
A
T
3
A
G
T
T
T
9
C
C
T
C
C
A
A
C
  128,383,084
  128,383,184
  128,383,185
  128,383,192
  128,383,323
  128,383,432
  128,383,565
  128,383,686
  128,383,799
  128,384,042
  128,384,051
  128,384,058
  128,384,077
  128,384,183
  128,384,699
  128,384,833
  128,385,080
  128,385,362
  128,385,911
  128,386,161
  128,386,228
  128,386,288
  128,386,647
  128,386,735
  128,386,798
  128,386,839
  128,386,899
  128,386,921
  128,386,981
  128,387,294
  128,387,393
  128,388,217
  128,388,595
  128,388,671
  128,389,056
  128,389,116
  128,389,377
  128,389,631
  128,389,743
  128,390,258
  128,390,470
  128,390,818
  128,390,864
  128,392,275
  128,392,907
  128,393,024
  128,394,418
  128,395,325
  128,395,357
  128,395,409
  128,395,615
  128,395,669
  128,395,690
  128,395,915
  128,395,918
  128,396,202
  128,396,812
  128,396,859
  128,396,860
  128,396,901
  128,396,909
  128,396,948
  128,397,037
  128,397,716
  128,397,831
  128,398,217
  128,398,909
  128,399,189
  128,399,319
  128,399,369
  128,399,390
  128,399,876
  128,400,374
  128,400,704
  128,401,193
  128,401,207
  128,401,224
  128,401,522
  128,401,726
  128,401,903
  128,401,933
  128,402,008
  128,402,138
  128,402,382
  128,402,413
  128,402,708
  128,402,766
  128,402,817
  128,403,216
  128,403,316
  128,403,457
  128,403,558
  128,403,707
  128,403,708
  128,403,833
  128,404,190
  128,405,887
  128,406,878
  128,407,579
  128,407,992
  128,407,993
  128,408,219
  128,408,222
  128,408,294
  128,408,577
  128,408,709
  128,410,055
  128,410,855
  128,411,126
  128,411,284
  128,411,517
  128,412,325
  128,412,335
  128,412,338
  128,412,358
  128,412,698
  128,413,173
  128,413,903
  128,414,398
  128,414,732
-
T
T
T
T
G
C
-
T
7
G
G
-
5
21
T
A
G
A
T
A
13
G
A
-
8
T
T
A
17
A
T
G
A
G
T
C
G
A
A
G
T
C
T
C
G
G
C
C
G
G
T
C
T
G
C
A
T
G
G
G
T
C
T
G
G
A
-
2/-
-
-
A
C
C
C
T
C
G
-
C
A
A
T
A
A
A
A
T
G
A
C
T
C
A
G
-
T
C
2
C
A
T
A
G
G
-
G
C
C
19
C
9/-
T
-
2
T
T
6
G
T