Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 135,177 (bp)   Positions: 126
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
ACI/EurMcwi (RGD) 
.003
.005
.998
.006
.001
.0
.044
.001
.002
.074
.005
.31
.004
.004
.494
.002
.977
.03
.093
.034
1.0
.017
.0
.0
.02
.0
.003
.925
.0
.007
.001
.001
.006
.0
.001
.03
.0
.001
.009
.007
.067
.001
.0
.032
.0
.012
.038
.0
.0
.001
.032
.0
.0
.001
.077
.209
.008
.126
.003
.333
.0
.003
.226
.002
.0
.0
.0
.004
.023
.0
.465
.536
.002
.003
.019
.001
.006
.002
.134
.871
.0
.056
.324
.002
.006
.007
.304
.0
.0
.0
.039
.037
.008
.014
.005
.027
.001
.108
.006
.425
1.0
--
.978
.428
.018
.454
.681
.026
.518
.001
.0
.008
.046
.004
.003
.037
.005
.001
.004
.026
.999
.0
.0
.001
.001
.0
Gpatch2l
Gpatch2l
Gpatch2l
Gpatch2l
Gpatch2l
Gpatch2l
Gpatch2l
Gpatch2l
Gpatch2l
Gpatch2l
Gpatch2l
Gpatch2l
Gpatch2l
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
T
A
C
C
T
A
T
A
T
G
C
G
T
A
A
A
G
G
T
C
T
T
C
G
C
T
G
A
T
G
A
G
A
A
A
A
T
C
G
T
G
T
G
A
G
G
A
T
T
C
A
A
T
G
A
T
A
G
A
G
C
C
G
C
G
G
C
G
G
T
A
G
G
G
C
C
G
T
C
G
A
T
G
G
T
T
A
T
T
T
C
C
G
C
T
G
A
T
C
T
C
C
T
G
C
A
G
G
C
T
A
T
A
C
G
C
T
T
A
C
G
G
A
A
A
T
  110,094,304
  110,095,600
  110,096,591
  110,096,611
  110,096,860
  110,097,022
  110,097,782
  110,097,819
  110,097,844
  110,098,328
  110,098,735
  110,099,083
  110,099,662
  110,100,234
  110,100,333
  110,100,358
  110,101,258
  110,101,585
  110,103,074
  110,103,217
  110,103,719
  110,103,969
  110,104,552
  110,104,792
  110,104,851
  110,105,258
  110,106,426
  110,106,566
  110,106,697
  110,107,037
  110,108,650
  110,109,001
  110,109,024
  110,109,151
  110,109,193
  110,109,415
  110,109,589
  110,109,663
  110,110,198
  110,110,199
  110,110,834
  110,111,057
  110,111,653
  110,112,203
  110,112,626
  110,113,148
  110,113,287
  110,114,425
  110,114,500
  110,114,581
  110,114,903
  110,115,073
  110,115,139
  110,115,140
  110,115,229
  110,115,659
  110,116,220
  110,116,375
  110,116,851
  110,117,374
  110,117,520
  110,117,987
  110,118,068
  110,119,025
  110,120,115
  110,120,138
  110,121,452
  110,121,541
  110,121,947
  110,122,260
  110,124,602
  110,124,847
  110,124,961
  110,125,235
  110,125,412
  110,125,497
  110,125,619
  110,125,879
  110,126,395
  110,127,713
  110,127,836
  110,128,587
  110,128,742
  110,128,831
  110,128,845
  110,128,846
  110,129,394
  110,129,566
  110,129,596
  110,131,386
  110,131,459
  110,133,798
  110,133,916
  110,133,943
  110,134,019
  110,134,063
  110,134,214
  110,134,325
  110,134,617
  110,134,650
  110,182,243
  110,190,372
  110,206,860
  110,217,454
  110,217,514
  110,218,038
  110,218,417
  110,220,528
  110,220,975
  110,222,181
  110,222,441
  110,223,076
  110,223,309
  110,224,133
  110,224,230
  110,224,236
  110,224,280
  110,224,761
  110,224,811
  110,225,552
  110,225,963
  110,227,129
  110,227,333
  110,227,336
  110,227,525
  110,228,040
C
G
T
T
C
G
A
G
C
A
T
A
C
G
G
G
C
A
C
T
C
A
T
A
T
C
A
G
C
A
G
A
G
G
G
G
A
T
G/A
T/C
T
C
T
G
C
C
G
C
C
T
G
G
C
A
G
C
T
A
G
A
T
T
A
T
A
A
T
A
A
C
G
T
A
A
T
T
A
A
T
A
T
C
T
A
C
C
G
C
C
C
T
T
A
T
C
T
G
A
A
C
G
A
G
T
T
G
A
A
T
C
G
C
G
T
A
T
G
C
G
T
A
A
G
G
G
C