SAP30P1 (SAP30 pseudogene 1) - Rat Genome Database
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Summary
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Genomics
QTLs in Region (GRCh38)
Expression
RNA-SEQ Expression
Sequence
Nucleotide Sequences
Additional Information
External Database Links
Nomenclature History
Gene: SAP30P1 (SAP30 pseudogene 1) Homo sapiens
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Analyze
General
Array IDs
Symbol:
SAP30P1
Name:
SAP30 pseudogene 1
RGD ID:
38666612
HGNC Page
HGNC:56560
Description:
Type:
pseudo
RefSeq Status:
INFERRED
Previously known as:
LOC677762; Sin3A associated protein 30kDa pseudogene
Related Functional Gene:
SAP30
Latest Assembly:
GRCh38 - Human Genome Assembly GRCh38
Position:
Human Assembly
Chr
Position (strand)
Source
Genome Browsers
JBrowse
NCBI
UCSC
Ensembl
GRCh38
3
150,611,058 - 150,612,079 (-)
NCBI
GRCh38
GRCh38
hg38
GRCh38
GRCh37
3
150,328,845 - 150,329,866 (-)
NCBI
GRCh37
GRCh37
hg19
GRCh37
Cytogenetic Map
3
q25.1
NCBI
HuRef
3
147,702,494 - 147,703,526 (-)
NCBI
HuRef
CHM1_1
3
150,291,895 - 150,292,932 (-)
NCBI
CHM1_1
T2T-CHM13v2.0
3
153,362,295 - 153,363,311 (-)
NCBI
T2T-CHM13v2.0
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Annotation
Click to see Annotation Summary View
References
Genomics
.
QTLs in Region (GRCh38)
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The following
QTLs
overlap with this region.
Full Report
CSV
TAB
Printer
Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1300026
BP36_H
Blood pressure QTL 36 (human)
4.04
Blood pressure
hypertension susceptibility
3
135720453
161720453
Human
1298415
BP24_H
Blood pressure QTL 24 (human)
2.9
Blood pressure
hypertension susceptibility
3
135720453
161720453
Human
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Expression
RNA-SEQ Expression
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
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Strain/Cell Line
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Sequence
Nucleotide Sequences
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RefSeq Transcripts
NG_005531
(Get FASTA)
NCBI Sequence Viewer
Search GEO for Microarray Profiles
GenBank Nucleotide
AC069236
(Get FASTA)
NCBI Sequence Viewer
Search GEO for Microarray Profiles
CP068275
(Get FASTA)
NCBI Sequence Viewer
Search GEO for Microarray Profiles
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Additional Information
External Database Links
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Database
Acc Id
Source(s)
COSMIC
SAP30P1
COSMIC
GTEx
SAP30P1
GTEx
HGNC ID
HGNC:56560
ENTREZGENE
Human Proteome Map
SAP30P1
Human Proteome Map
NCBI Gene
LOC677762
ENTREZGENE
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Nomenclature History
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2022-11-08
SAP30P1
SAP30 pseudogene 1
LOC677762
Sin3A associated protein 30kDa pseudogene
Symbol and/or name change
5135510
APPROVED