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Gene: TRL-CAG2-1 (tRNA-Leu (anticodon CAG) 2-1) Homo sapiens

Symbol:

TRL-CAG2-1

Name:

tRNA-Leu (anticodon CAG) 2-1

RGD ID:

2300847

HGNC Page

Description:

Type:

trna

RefSeq Status:

Previously known as:

transfer RNA-Leu (CAG) 2-1; tRNA-Leu (CAG) 2-1; TRNAL13

Allele / Splice:

Latest Assembly:

GRCh38 - Human Genome Assembly GRCh38

Position:

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	16	57,299,951 - 57,300,033 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh37	16	57,333,863 - 57,333,945 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Cytogenetic Map	16	q13-q21	NCBI
HuRef	16	43,201,850 - 43,201,932 (+)	NCBI		HuRef
CHM1_1	16	58,742,086 - 58,742,168 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	16	63,095,923 - 63,096,005 (+)	NCBI		T2T-CHM13v2.0

JBrowse:

References

Additional References at PubMed

PMID:18984615

Genomics

Clinical Variants

Name	Type	Condition(s)	Position(s)	Clinical significance
GRCh38/hg38 16q12.2-21(chr16:55457477-63841622)x1	copy number loss	See cases [RCV000133738]	Chr16:55457477..63841622 [GRCh38] Chr16:55491389..63875526 [GRCh37] Chr16:54048890..62433027 [NCBI36] Chr16:16q12.2-21	pathogenic
GRCh38/hg38 16q12.2-24.3(chr16:52899183-90088654)x3	copy number gain	See cases [RCV000143425]	Chr16:52899183..90088654 [GRCh38] Chr16:52933095..90155062 [GRCh37] Chr16:51490596..88682563 [NCBI36] Chr16:16q12.2-24.3	pathogenic
GRCh38/hg38 16q12.1-22.1(chr16:49685521-68401712)x3	copy number gain	See cases [RCV000143752]	Chr16:49685521..68401712 [GRCh38] Chr16:49719432..68435615 [GRCh37] Chr16:48276933..66993116 [NCBI36] Chr16:16q12.1-22.1	pathogenic
GRCh38/hg38 16q13-22.2(chr16:56883592-71279975)x3	copy number gain	See cases [RCV000052405]	Chr16:56883592..71279975 [GRCh38] Chr16:56917504..71313878 [GRCh37] Chr16:55475005..69871379 [NCBI36] Chr16:16q13-22.2	pathogenic
Single allele	duplication	not provided [RCV001542388]	Chr16:46385317..61223349 [GRCh38] Chr16:16q11.2-21	pathogenic
Single allele	deletion	not provided [RCV002266766]	Chr16:53818483..57631312 [GRCh38] Chr16:16q12.2-21	pathogenic

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


GenBank Nucleotide	AC108081	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CP068262	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HG983896	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Additional Information

External Database Links

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2019-04-09	TRL-CAG2-1	tRNA-Leu (anticodon CAG) 2-1		tRNA-Leu (CAG) 2-1	Symbol and/or name change	5135510	APPROVED
2018-11-29	TRL-CAG2-1	tRNA-Leu (CAG) 2-1		transfer RNA-Leu (CAG) 2-1	Symbol and/or name change	5135510	APPROVED
2014-06-24	TRL-CAG2-1	transfer RNA-Leu (CAG) 2-1	TRNAL13	transfer RNA leucine 13 (anticodon CAG)	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

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MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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