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Gene: Taf9 (TATA-box binding protein associated factor 9) Rattus norvegicus

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Symbol:

Taf9

Name:

TATA-box binding protein associated factor 9

RGD ID:

727861

Description:

Predicted to enable several functions, including ATPase binding activity; C2H2 zinc finger domain binding activity; and p53 binding activity. Predicted to contribute to RNA polymerase II general transcription initiation factor activity and histone acetyltransferase activity. Involved in positive regulation of transcription by RNA polymerase II and response to L-glutamate. Predicted to be located in nucleus. Predicted to be part of SAGA complex; nucleoplasm; and pre-snoRNP complex. Orthologous to human TAF9 (TATA-box binding protein associated factor 9); PARTICIPATES IN de novo purine biosynthetic pathway; RNA polymerase II transcription initiation pathway; ribosome biogenesis pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 2,6-dinitrotoluene.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

CINAP; LOC294694; MGC108535; MGC109428; RNA polymerase II TBP-associated factor subunit G; TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor; TAF9 RNA polymerase II, TATA box binding protein-associated factor; TAFII-31; TAFII-32; TAFII31; TAFII32; transcription initiation factor TFIID 31 kDa subunit; transcription initiation factor TFIID 32 kDa subunit; transcription initiation factor TFIID subunit 9

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Related Pseudogenes:

Taf9-ps

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	33,528,388 - 33,532,395 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	2	33,531,368 - 33,536,078 (+)	Ensembl				GRCr8
mRatBN7.2	2	31,794,316 - 31,798,324 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	31,794,142 - 31,798,769 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	2	38,928,842 - 38,932,844 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	36,969,330 - 36,973,211 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	31,827,274 - 31,831,281 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	30,664,407 - 30,668,414 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	30,664,639 - 30,668,414 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	2	49,824,043 - 49,828,050 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	2	31,454,557 - 31,466,611 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	2	27,807,006 - 27,811,013 (+)	NCBI		Celera
RGSC_v3.1	2	31,374,959 - 31,386,977 (+)	NCBI
Cytogenetic Map	2	q12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

human immunodeficiency virus infectious disease (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (ISO)

17alpha-ethynylestradiol (ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-dinitrotoluene (EXP)

2,6-dinitrotoluene (EXP)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

afimoxifene (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

amitrole (EXP)

antimycin A (ISO)

arsenous acid (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

caffeine (ISO)

carbon nanotube (ISO)

chlorpyrifos (ISO)

chromium(6+) (ISO)

clofibrate (ISO)

cobalt dichloride (ISO)

deguelin (ISO)

diarsenic trioxide (ISO)

dibenzo[a,l]pyrene (ISO)

dibutyl phthalate (EXP)

dicrotophos (ISO)

doxorubicin (ISO)

flutamide (EXP)

FR900359 (ISO)

fulvestrant (ISO)

gentamycin (EXP)

glafenine (EXP)

methimazole (EXP)

methylmercury chloride (ISO)

nefazodone (EXP)

ochratoxin A (EXP)

oxaliplatin (EXP)

ozone (ISO)

paracetamol (EXP,ISO)

paraquat (EXP)

picoxystrobin (ISO)

pirinixic acid (ISO)

progesterone (ISO)

quercetin (ISO)

raloxifene (ISO)

resveratrol (ISO)

rotenone (ISO)

sodium arsenite (ISO)

sodium dichromate (EXP)

sulfadimethoxine (EXP)

tamoxifen (ISO)

tetrachloromethane (EXP)

thifluzamide (ISO)

thimerosal (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

tolcapone (EXP)

topotecan (EXP)

trichloroethene (EXP)

triphenyl phosphate (ISO)

triptonide (ISO)

tungsten (ISO)

valproic acid (ISO)

vinclozolin (EXP)

zinc atom (ISO)

zinc(0) (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

box C/D snoRNP assembly (ISO)

chromatin remodeling (IEA)

coenzyme A biosynthetic process (IEA)

DNA-templated transcription (IEA)

DNA-templated transcription initiation (IEA)

mRNA transcription by RNA polymerase II (ISO)

negative regulation of apoptotic process (ISO)

negative regulation of proteasomal ubiquitin-dependent protein catabolic process (ISO)

nucleoside monophosphate phosphorylation (IEA)

positive regulation of response to cytokine stimulus (ISO)

positive regulation of transcription by RNA polymerase II (IMP,ISO)

positive regulation of transcription initiation by RNA polymerase II (ISO)

protein stabilization (ISO)

regulation of transcription by RNA polymerase II (ISO)

response to interleukin-1 (ISO)

response to L-glutamate (IEP)

ribosome biogenesis (IEA)

RNA polymerase II preinitiation complex assembly (IBA,ISO)

rRNA processing (IEA)

Cellular Component

MLL1 complex (ISO,ISS)

nucleoplasm (ISO)

nucleus (IEA,ISO)

pre-snoRNP complex (ISO)

SAGA complex (IBA,ISO)

transcription factor TFIID complex (IBA,ISO)

transcription factor TFTC complex (IBA,ISO)

Molecular Function

AMP kinase activity (IEA)

ATP binding (IEA)

ATP hydrolysis activity (IEA)

ATPase binding (ISO)

C2H2 zinc finger domain binding (ISO)

dephospho-CoA kinase activity (IEA)

DNA binding (ISO)

DNA-binding transcription factor binding (ISO)

histone acetyltransferase activity (ISO)

kinase activity (IEA)

nucleotide binding (IEA)

p53 binding (ISO)

protein binding (IPI,ISO)

protein heterodimerization activity (IEA)

RNA polymerase II general transcription initiation factor activity (IBA)

transcription cis-regulatory region binding (ISO)

transcription coactivator activity (IBA,ISO)

transferase activity (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

de novo purine biosynthetic pathway (ISO)

ribosome biogenesis pathway (IEA)

RNA polymerase II transcription initiation pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Rat TAFII31 gene is induced upon programmed cell death in differentiated PC12 cells deprived of NGF.	Aoki T, etal., Biochem Biophys Res Commun 1997 May 8;234(1):230-4.
2.	In vivo functional analysis of the histone 3-like TAF9 and a TAF9-related factor, TAF9L.	Chen Z and Manley JL, J Biol Chem 2003 Sep 12;278(37):35172-83. Epub 2003 Jul 01.
3.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
4.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
5.	Structural bioinformatics of the general transcription factor TFIID.	Malkowska M, etal., Biochimie. 2013 Apr;95(4):680-91. doi: 10.1016/j.biochi.2012.10.024. Epub 2012 Nov 9.
6.	NCBI rat LocusLink and RefSeq merged data October 15, 2003	NCBI rat LocusLink and RefSeq merged data October 15, 2003
7.	Dynamics of nucleotide metabolism as a supporter of life phenomena.	Noma T J Med Invest. 2005 Aug;52(3-4):127-36.
8.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
9.	GOA pipeline	RGD automated data pipeline
10.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
11.	Comprehensive gene review and curation	RGD comprehensive gene curation
12.	ATAC-king the complexity of SAGA during evolution.	Spedale G, etal., Genes Dev. 2012 Mar 15;26(6):527-41. doi: 10.1101/gad.184705.111.
13.	Transcriptional modification by a CASK-interacting nucleosome assembly protein.	Wang GS, etal., Neuron. 2004 Apr 8;42(1):113-28.

Additional References at PubMed

PMID:8889548	PMID:9171108	PMID:9674425	PMID:11278372	PMID:11564863	PMID:12477932	PMID:14580349	PMID:14766980	PMID:15309719	PMID:15489227	PMID:15489334	PMID:15601843
PMID:15899866	PMID:15960975	PMID:17636026	PMID:18722179	PMID:19251649

Genomics

Comparative Map Data

Taf9
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	33,528,388 - 33,532,395 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	2	33,531,368 - 33,536,078 (+)	Ensembl				GRCr8
mRatBN7.2	2	31,794,316 - 31,798,324 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	31,794,142 - 31,798,769 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	2	38,928,842 - 38,932,844 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	36,969,330 - 36,973,211 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	31,827,274 - 31,831,281 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	30,664,407 - 30,668,414 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	30,664,639 - 30,668,414 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	2	49,824,043 - 49,828,050 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	2	31,454,557 - 31,466,611 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	2	27,807,006 - 27,811,013 (+)	NCBI		Celera
RGSC_v3.1	2	31,374,959 - 31,386,977 (+)	NCBI
Cytogenetic Map	2	q12	NCBI

TAF9
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	69,364,743 - 69,369,824 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	69,362,026 - 69,370,026 (-)	Ensembl			hg38	GRCh38
GRCh37	5	68,660,570 - 68,665,651 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	68,683,309 - 68,701,596 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	5	68,683,310 - 68,701,122	NCBI
Celera	5	65,650,213 - 65,668,504 (-)	NCBI		Celera
Cytogenetic Map	5	q13.2	NCBI
HuRef	5	65,603,597 - 65,621,883 (-)	NCBI		HuRef
CHM1_1	5	68,647,401 - 68,665,684 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	5	70,190,530 - 70,195,609 (-)	NCBI		T2T-CHM13v2.0

Taf9
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	100,787,851 - 100,792,568 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	100,788,087 - 100,792,568 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm39 Ensembl	13	100,787,487 - 100,802,867 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	13	100,651,343 - 100,656,060 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	100,651,579 - 100,656,060 (+)	Ensembl			mm10	GRCm38
GRCm38.p6 Ensembl	13	100,650,979 - 100,666,359 (+)	Ensembl			mm10	GRCm38
MGSCv37	13	101,421,298 - 101,436,368 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	13	101,751,631 - 101,766,616 (+)	NCBI		MGSCv36	mm8
Celera	13	104,261,518 - 104,276,056 (+)	NCBI		Celera
Cytogenetic Map	13	D1	NCBI
cM Map	13	53.23	NCBI

Taf9
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955575	74,506 - 76,272 (-)	Ensembl
ChiLan1.0	NW_004955575	74,506 - 76,272 (-)	NCBI	ChiLan1.0	ChiLan1.0

TAF9
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	44,550,152 - 44,554,888 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	42,703,749 - 42,708,513 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	44,630,503 - 44,635,760 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	46,201,985 - 46,207,254 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2

TAF9
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	2	54,403,908 - 54,406,857 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	2	54,390,411 - 54,406,872 (-)	Ensembl			canFam3	CanFam3.1
ROS_Cfam_1.0	36	19,339,518 - 19,340,582 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	2	54,914,940 - 54,917,901 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	4	47,834,795 - 47,835,859 (+)	NCBI		UMICH_Zoey_3.1
UU_Cfam_GSD_1.0	36	19,524,389 - 19,525,453 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Taf9
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	191,315,967 - 191,320,141 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936480	252,435 - 256,609 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936480	252,435 - 256,609 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TAF9
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	16	47,490,027 - 47,495,880 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	16	47,494,841 - 47,499,568 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	16	51,338,769 - 51,343,462 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TAF9
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	4	65,451,038 - 65,455,896 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666049	14,187,417 - 14,192,526 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Taf9
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624905	240,760 - 244,656 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624905	240,760 - 244,656 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Taf9
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	3	158,034,972 - 158,038,824 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Taf9
17 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	36
Count of miRNA genes:	34
Interacting mature miRNAs:	35
Transcripts:	ENSRNOT00000061166
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
10755430	Coatc6	Coat color QTL 6		0.02576	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	2	13325041	58325041	Rat
7387318	Stl32	Serum triglyceride level QTL 32	3.2	0.0003	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	2	24117813	69117813	Rat
10755499	Bp389	Blood pressure QTL 389	2.61		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	20695736	231474293	Rat
738010	Lnnr3	Liver neoplastic nodule remodeling QTL 3	2.94		liver integrity trait (VT:0010547)	liver remodeling tumorous lesion number (CMO:0001461)	2	1	42977529	Rat
1358917	Cm42	Cardiac mass QTL 42	2.82		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	27148328	206613235	Rat
9590080	Insglur4	Insulin/glucose ratio QTL 4	28.7	0.001	blood insulin amount (VT:0001560)	calculated plasma insulin level (CMO:0002170)	2	6152767	51152767	Rat
1579916	Bp270	Blood pressure QTL 270		0.003	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	16051883	61051883	Rat
731167	Glom4	Glomerulus QTL 4	2.4	0.0082	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)	2	22038044	67038044	Rat
731166	Mamtr2	Mammary tumor resistance QTL 2		0.0001	mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	2	9623581	54623581	Rat
1358913	Cm41	Cardiac mass QTL 41	2.73		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	27148328	206613235	Rat
1302794	Stl27	Serum triglyceride level QTL 27	4.4	0.0001	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	2	27148328	145807373	Rat
9590095	Sffal3	Serum free fatty acids level QTL 3	6.78	0.001	blood free fatty acid amount (VT:0001553)	plasma free fatty acids level (CMO:0000546)	2	28889991	73889991	Rat
1331764	Bp205	Blood pressure QTL 205	3.476		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	14368707	59368707	Rat
1358901	Cm38	Cardiac mass QTL 38	2		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	27148328	159440891	Rat
1600379	Mcs18	Mammary carcinoma susceptibility QTL 18	2.6		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	2	9623581	44538110	Rat
1331760	Bp206	Blood pressure QTL 206	3.62454		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	4265106	205135428	Rat
1358899	Kidm23	Kidney mass QTL 23	3.88		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	27148328	159440891	Rat
1358908	Bw49	Body weight QTL 49	3.36		body mass (VT:0001259)	body weight (CMO:0000012)	2	27148557	159440760	Rat
1358910	Kidm27	Kidney mass QTL 27	5.77		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	27148328	159440891	Rat
61355	Bp36	Blood pressure QTL 36	2.9		blood pressure trait (VT:0000183)	systolic blood pressure (CMO:0000004)	2	7605533	104774005	Rat
1358911	Kidm28	Kidney mass QTL 28	5.42		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	27148328	159440891	Rat
1358904	Cm39	Cardiac mass QTL 39	2.26		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	27148328	159440891	Rat
1354617	Bp240	Blood pressure QTL 240	4		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	28652666	83465677	Rat
1578664	Bmd9	Bone mineral QTL density 9	5		femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	2	5736325	50736325	Rat
1358887	Bw50	Body weight QTL 50	2.39		body mass (VT:0001259)	body weight (CMO:0000012)	2	27148557	159440760	Rat
2290453	Scl55	Serum cholesterol level QTL 55	2.83		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	2	28652666	139067443	Rat
152025206	Hrtrt23	Heart rate QTL 23	5.98		heart pumping trait (VT:2000009)		2	30219200	171802126	Rat
1358894	Kidm24	Kidney mass QTL 24	4.03		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	27148328	159440891	Rat
731184	Mamtr4	Mammary tumor resistance QTL 4		0.0003	mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	2	18227137	63227137	Rat
152025204	Hrtrt22	Heart rate QTL 22	5.6		heart pumping trait (VT:2000009)		2	30219200	171802126	Rat
1582246	Cm60	Cardiac mass QTL 60	5.8		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	33269996	78269996	Rat
1354603	Bp243	Blood pressure QTL 243	3.9		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	28652666	73652666	Rat

Markers in Region

RH128995

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	31,797,926 - 31,798,125 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	30,668,017 - 30,668,215	NCBI	Rnor6.0
Rnor_5.0	2	49,827,653 - 49,827,851	UniSTS	Rnor5.0
RGSC_v3.4	2	31,458,167 - 31,458,365	UniSTS	RGSC3.4
Celera	2	27,810,616 - 27,810,814	UniSTS
RH 3.4 Map	2	63.88	UniSTS
Cytogenetic Map	2	q12	UniSTS

RH142847

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	31,794,893 - 31,795,007 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	30,664,985 - 30,665,098	NCBI	Rnor6.0
Rnor_5.0	2	49,824,621 - 49,824,734	UniSTS	Rnor5.0
RGSC_v3.4	2	31,455,135 - 31,455,248	UniSTS	RGSC3.4
Celera	2	27,807,584 - 27,807,697	UniSTS
RH 3.4 Map	2	78.3	UniSTS
Cytogenetic Map	2	q12	UniSTS

RH136869

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	31,806,049 - 31,806,200 (+)	MAPPER	mRatBN7.2
mRatBN7.2	20	25,577,081 - 25,577,232 (+)	MAPPER	mRatBN7.2
Rnor_6.0	20	27,129,890 - 27,130,040	NCBI	Rnor6.0
Rnor_6.0	2	30,676,139 - 30,676,289	NCBI	Rnor6.0
Rnor_5.0	20	28,970,428 - 28,970,578	UniSTS	Rnor5.0
Rnor_5.0	2	49,835,775 - 49,835,925	UniSTS	Rnor5.0
RGSC_v3.4	2	31,466,289 - 31,466,439	UniSTS	RGSC3.4
RGSC_v3.4	20	25,401,745 - 25,401,895	UniSTS	RGSC3.4
Celera	20	26,872,950 - 26,873,100	UniSTS
Celera	2	27,818,538 - 27,818,688	UniSTS
Cytogenetic Map	2	q12	UniSTS
Cytogenetic Map	20	p11	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001037310	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_184048	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC094341	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY325235	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY359819	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC091109	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CB724309	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CB743840	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473955	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CV127122	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ213120	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ215462	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ221138	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ229736	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000076061 ⟹ ENSRNOP00000068116

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	2	30,666,475 - 30,668,185 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000076294 ⟹ ENSRNOP00000068206

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	2	30,664,642 - 30,667,868 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000076372 ⟹ ENSRNOP00000068315

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	2	30,664,639 - 30,667,456 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000076434 ⟹ ENSRNOP00000067916

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	2	30,664,690 - 30,667,873 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000076484 ⟹ ENSRNOP00000068397

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	2	30,664,695 - 30,668,414 (+)	Ensembl

RefSeq Acc Id:

NM_001037310 ⟹ NP_001032387

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	33,528,643 - 33,532,395 (+)	NCBI
mRatBN7.2	2	31,794,571 - 31,798,324 (+)	NCBI
Rnor_6.0	2	30,664,662 - 30,668,414 (+)	NCBI
Rnor_5.0	2	49,824,043 - 49,828,050 (+)	NCBI
RGSC_v3.4	2	31,454,557 - 31,466,611 (+)	RGD
Celera	2	27,807,261 - 27,811,013 (+)	NCBI

Sequence:

show sequence

GGGAGGCGGAGGTTCGGTTAGCCAGACGCGCCGCGGCGACGAGAAGGAGAGCGGCTGCCGGCTC
CTGCTCCGTTGCCCCGCCGCCCCGGGAGACACTTAGCCTTTGTCAATCTGGTATCTTTGCCTGG
AGGACCGGCTGCTGATTCTTTGTCGCGGTCGGGCTAGGGGTTTTTTTAAATCGGGGTGCTGTGA
GGCAGTTTTTAGCCGTTAGGTGATGTGGTAATGGTGGGTGCCCCAGCCCTTGGGCCTTCCTGAT
CGCCACCCATTTTCTTTTCTTTTTTAATGCCCCGTTTGCTTCCCAAGAGGTTTCGGTAGATGAT
TTTGGGATGCTTGTGGAGAGAAGTGACTAGTTAACTGTTTCTTAGTTCCGTTCGCGCCACAGGC
TTTGTTGTTGTTTTAGTGTTGGGGTTTCTGAGCGTTTGTGGACGTTTGTGGTGATCTGGAGCTG
ATCGTGGGGGCCGGGGGAAGGTTTCGGAGCTTTAATTAGAAATATTAAGTTGTAGCATCTAGTA
GCATCAAAGGCCAGTCGTACAAAAATGGGATGGATGTAGATGTCAGGTACACCAGGGGTTGGAA
AAACCACACTAGGCAAAGAACTTGCATCAAGATCAGGCCTGAAGTACGTTAATGTGGGAGATCT
AGCTCGGGAAGTCTGATCACCGGATATCATGGAGTCTGGCAAGATGGCGTCTCCCAAGAGCATG
CCGAAAGACGCACAGATGATGGCACAAATCCTGAAGGATATGGGGATTACAGAGTATGAGCCAA
GAGTTATAAATCAGATGCTGGAGTTTGCCTTCCGATATGTGACCACAATTCTAGATGATGCTAA
AATTTATTCAAGCCATGCTAAGAAACCTACTGTTGATGCAGATGATGTCCGATTGGCAATCCAG
TGCCGTGCTGACCAGTCTTTCACTTCTCCTCCCCCGAGAGATTTTTTATTAGATATTGCAAGGC
AAAGAAATCAAACCCCTTTGCCATTGATCAAGCCATATTCAGGTCCTAGATTGCCACCTGATAG
ATACTGCTTAACTGCTCCAAACTATAGGCTTAAGTCTTTACAAAAAAAGGCACCTACTCCTGCA
GGAAGAATAACGGTTCCAAGGTTAAGTGTTGGTTCAGTTTCTAGTAGACCTAGTACTCCCACAC
TAGGCACACCAACTCCACAAGCCATGTCTGTGTCAACTAAAGTAGGCACTCCAATGTCCCTCAC
AGGGCAGAGGTTTACAGTACAGATGCCTGCTTCTCAGTCCCCTGCTGTAAAAGCTTCCATTCCT
GCAACACCAGCAGTTCAGAATGTTCTTATTAATCCATCATTAATTGGGTCCAAAAACATTCTTA
TTACTACTAATATGGTGTCACAAAATACAGCCAATGAGTCGGCAAACGCACTCAAAAGAAAACG
TGAAGAAGAAGATGATGACGATGATGATGATGATGATGACTATGATAATTTGTAATCTAGCCTT
GTCGCCTGTAACTATTCTTGGTCTTGGATCCATTGTACTGAAATTGAAAAAGCATGTTAGCTGT
TTTAAAGCTGTACTTTAGAAAGTGGTATTTAATACGTACACTTACTATACTTTTGGATTGAAAT
GTTCAGTTTTACTAGAACTAGTAATGGTTTTTCATCGACCTTTATGCATAAAAAATAAAATTGT
CATTTATCAGTTTGAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NM_184048 ⟹ NP_908937

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	33,528,388 - 33,532,395 (+)	NCBI
mRatBN7.2	2	31,794,316 - 31,798,324 (+)	NCBI
Rnor_6.0	2	30,664,407 - 30,668,414 (+)	NCBI
Rnor_5.0	2	49,824,043 - 49,828,050 (+)	NCBI
RGSC_v3.4	2	31,454,557 - 31,466,611 (+)	RGD
Celera	2	27,807,006 - 27,811,013 (+)	NCBI

Sequence:

show sequence

CTCCCTGGAGAGCGCGTGAGCCGAAGCGCTGGCTGCGTGTGAAGGAGTACTATGAAGCTTCCGA
ACATCCTGCTCACCGGTACACCAGGGGTTGGAAAAACCACACTAGGCAAAGAACTTGCATCAAG
ATCAGGCCTGAAGTACGTTAATGTGGGAGATCTAGCTCGGGAAGTCTGATCACCGGATATCATG
GAGTCTGGCAAGATGGCGTCTCCCAAGAGCATGCCGAAAGACGCACAGATGATGGCACAAATCC
TGAAGGATATGGGGATTACAGAGTATGAGCCAAGAGTTATAAATCAGATGCTGGAGTTTGCCTT
CCGATATGTGACCACAATTCTAGATGATGCTAAAATTTATTCAAGCCATGCTAAGAAACCTACT
GTTGATGCAGATGATGTCCGATTGGCAATCCAGTGCCGTGCTGACCAGTCTTTCACTTCTCCTC
CCCCGAGAGATTTTTTATTAGATATTGCAAGGCAAAGAAATCAAACCCCTTTGCCATTGATCAA
GCCATATTCAGGTCCTAGATTGCCACCTGATAGATACTGCTTAACTGCTCCAAACTATAGGCTT
AAGTCTTTACAAAAAAAGGCACCTACTCCTGCAGGAAGAATAACGGTTCCAAGGTTAAGTGTTG
GTTCAGTTTCTAGTAGACCTAGTACTCCCACACTAGGCACACCAACTCCACAAGCCATGTCTGT
GTCAACTAAAGTAGGCACTCCAATGTCCCTCACAGGGCAGAGGTTTACAGTACAGATGCCTGCT
TCTCAGTCCCCTGCTGTAAAAGCTTCCATTCCTGCAACACCAGCAGTTCAGAATGTTCTTATTA
ATCCATCATTAATTGGGTCCAAAAACATTCTTATTACTACTAATATGGTGTCACAAAATACAGC
CAATGAGTCGGCAAACGCACTCAAAAGAAAACGTGAAGAAGAAGATGATGACGATGATGATGAT
GATGATGACTATGATAATTTGTAATCTAGCCTTGTCGCCTGTAACTATTCTTGGTCTTGGATCC
ATTGTACTGAAATTGAAAAAGCATGTTAGCTGTTTTAAAGCTGTACTTTAGAAAGTGGTATTTA
ATACGTACACTTACTATACTTTTGGATTGAAATGTTCAGTTTTACTAGAACTAGTAATGGTTTT
TCATCGACCTTTATGCATAAAAAATAAAATTGTCATTTATCAGTTTGAAAAAAAAAAAAAAAAA
AAAAAAAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001032387	(Get FASTA)	NCBI Sequence Viewer
	NP_908937	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH91109	(Get FASTA)	NCBI Sequence Viewer
	AAP92636	(Get FASTA)	NCBI Sequence Viewer
	AAQ56726	(Get FASTA)	NCBI Sequence Viewer
	EDM10205	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000068116.2
	ENSRNOP00000068424
	ENSRNOP00000068424.2
GenBank Protein	Q5BKE0	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_908937 ⟸ NM_184048

- UniProtKB:

Q6UV34 (UniProtKB/Swiss-Prot), Q7TP20 (UniProtKB/Swiss-Prot), Q5BKE0 (UniProtKB/Swiss-Prot), A6I598 (UniProtKB/TrEMBL), A0A8L2QZB8 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MESGKMASPKSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKP
TVDADDVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRYCLTAPNYR
LKSLQKKAPTPAGRITVPRLSVGSVSSRPSTPTLGTPTPQAMSVSTKVGTPMSLTGQRFTVQMP
ASQSPAVKASIPATPAVQNVLINPSLIGSKNILITTNMVSQNTANESANALKRKREEEDDDDDD
DDDDYDNL

hide sequence

RefSeq Acc Id:

NP_001032387 ⟸ NM_001037310

- UniProtKB:

Q6UV34 (UniProtKB/Swiss-Prot), Q7TP20 (UniProtKB/Swiss-Prot), Q5BKE0 (UniProtKB/Swiss-Prot), A6I598 (UniProtKB/TrEMBL), A0A8L2QZB8 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MESGKMASPKSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKP
TVDADDVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRYCLTAPNYR
LKSLQKKAPTPAGRITVPRLSVGSVSSRPSTPTLGTPTPQAMSVSTKVGTPMSLTGQRFTVQMP
ASQSPAVKASIPATPAVQNVLINPSLIGSKNILITTNMVSQNTANESANALKRKREEEDDDDDD
DDDDYDNL

hide sequence

Ensembl Acc Id:

ENSRNOP00000068206 ⟸ ENSRNOT00000076294

Ensembl Acc Id:

ENSRNOP00000068315 ⟸ ENSRNOT00000076372

Ensembl Acc Id:

ENSRNOP00000068116 ⟸ ENSRNOT00000076061

Ensembl Acc Id:

ENSRNOP00000068397 ⟸ ENSRNOT00000076484

Ensembl Acc Id:

ENSRNOP00000067916 ⟸ ENSRNOT00000076434

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q5BKE0-F1-model_v2	AlphaFold	Q5BKE0	1-264	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13691112

Promoter ID:

EPDNEW_R1633

Type:

multiple initiation site

Name:

Taf9_1

Description:

TATA-box binding protein associated factor 9

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	2	30,664,685 - 30,664,745	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:727861	AgrOrtholog
BioCyc Gene	G2FUF-54655	BioCyc
Ensembl Genes	ENSRNOG00000039848	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
	ENSRNOG00000051258	Ensembl
Ensembl Transcript	ENSRNOT00000076061.2	UniProtKB/Swiss-Prot
	ENSRNOT00000076786	ENTREZGENE
	ENSRNOT00000076786.3	UniProtKB/Swiss-Prot
Gene3D-CATH	1.10.20.10	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7319327	IMAGE-MGC_LOAD
	IMAGE:7322630	IMAGE-MGC_LOAD
InterPro	Histone-fold	UniProtKB/Swiss-Prot
	TFIID-31	UniProtKB/Swiss-Prot
	TFIID_subunit_9	UniProtKB/Swiss-Prot
KEGG Report	rno:373541	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:108535	IMAGE-MGC_LOAD
	MGC:109428	IMAGE-MGC_LOAD
NCBI Gene	373541	ENTREZGENE
PANTHER	TAF9 RNA POLYMERASE II, TATA BOX-BINDING PROTEIN (TBP)-ASSOCIATED FACTOR	UniProtKB/Swiss-Prot
	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 9	UniProtKB/Swiss-Prot
Pfam	TFIID-31kDa	UniProtKB/Swiss-Prot
PhenoGen	Taf9	PhenoGen
RatGTEx	ENSRNOG00000039848	RatGTEx
	ENSRNOG00000051258	RatGTEx
Superfamily-SCOP	SSF47113	UniProtKB/Swiss-Prot
UniProt	A0A096MK91_RAT	UniProtKB/TrEMBL
	A0A8L2QZB8	ENTREZGENE
	A6I597_RAT	UniProtKB/TrEMBL
	A6I598	ENTREZGENE, UniProtKB/TrEMBL
	Q5BKE0	ENTREZGENE
	Q6UV34	ENTREZGENE
	Q7TP20	ENTREZGENE
	TAF9_RAT	UniProtKB/Swiss-Prot
UniProt Secondary	Q6UV34	UniProtKB/Swiss-Prot
	Q7TP20	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-11-29	Taf9	TATA-box binding protein associated factor 9	Taf9	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-07-11	Taf9	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor	Taf9_predicted	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor (predicted)	Data merged from RGD:1306162	737654	APPROVED
2005-07-08	Taf9	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor			Symbol and Name status set to approved	1299863	APPROVED
2005-01-12	Taf9_predicted	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor (predicted)			Symbol and Name status set to approved	70820	APPROVED

RGD Curation Notes

Note Type	Note	Reference

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - CTD

RGD Manual Annotations

Imported Annotations - KEGG (archival)

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Imported Disease Annotations - CTD

RGD Manual Annotations

Imported Annotations - KEGG (archival)