Pawr (pro-apoptotic WT1 regulator) - Rat Genome Database

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Gene: Pawr (pro-apoptotic WT1 regulator) Rattus norvegicus
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Symbol: Pawr
Name: pro-apoptotic WT1 regulator
RGD ID: 69065
Description: Enables actin binding activity; protein kinase C binding activity; and protein phosphatase 1 binding activity. Involved in several processes, including detection of stimulus involved in sensory perception of pain; positive regulation of apoptotic process; and regulation of cellular extravasation. Located in actin filament; axon; and neuronal cell body. Biomarker of depressive disorder; epilepsy; middle cerebral artery infarction; and transient cerebral ischemia. Orthologous to human PAWR (pro-apoptotic WT1 regulator); PARTICIPATES IN ceramide signaling pathway; INTERACTS WITH (R,R,R)-alpha-tocopherol; (S)-colchicine; 17beta-estradiol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: Par-4; par-4 induced by effectors of apoptosis; Par4; PRKC apoptosis WT1 regulator; PRKC, apoptosis, WT1, regulator; prostate apoptosis response 4 protein; prostate apoptosis response protein 4; transcriptional repressor Par-4-like protein PAWR
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8745,531,480 - 45,611,492 (+)NCBIGRCr8
mRatBN7.2743,645,028 - 43,725,033 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl743,645,084 - 43,725,028 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx745,554,243 - 45,635,692 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0747,757,364 - 47,838,790 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0747,535,105 - 47,616,535 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0751,273,764 - 51,353,700 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl751,273,771 - 51,353,068 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0751,286,663 - 51,366,383 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4747,040,162 - 47,119,613 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1747,060,432 - 47,139,881 (+)NCBI
Celera740,512,247 - 40,591,588 (+)NCBICelera
Cytogenetic Map7q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


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Original Reference(s)
PawrRatAcute Lung Injury  IEP 9835397mRNA more ...RGD 
PawrRatAlzheimer's disease  ISOPAWR (Homo sapiens)9835364mRNA and protein:increased expression:brain:RGD 
PawrRatBrain Injuries  IEP 9835358mRNA and protein:increased expression:brain:RGD 
PawrRatcholangiocarcinoma  ISOPAWR (Homo sapiens)9835357mRNA and protein:decreased expression:cholangiocyte:RGD 
PawrRatdepressive disorder  IEP 6907449mRNA:decreased expression:striatumRGD 
PawrRatepilepsy  IEP 9835366protein:increased expression:hippocampus:RGD 
PawrRatHyperalgesia treatmentIDA 9835416 RGD 
PawrRatmajor depressive disorder  ISOPAWR (Homo sapiens)9835359protein:decreased expression:brain:RGD 
PawrRatmiddle cerebral artery infarction treatmentISOPawr (Mus musculus)9835381 RGD 
PawrRatmiddle cerebral artery infarction  IEP 9850083protein:increased expression:brain:RGD 
PawrRatmiddle cerebral artery infarction  ISORDO:00073749835380protein:increased expression:brain:RGD 
PawrRatMyocardial Reperfusion Injury treatmentIMP 9835369 RGD 
PawrRatOptic Nerve Injuries  IEP 1299297mRNA:increased expression:retina:RGD 
PawrRattransient cerebral ischemia  IEP 1302269mRNA:increased expression:brain:RGD 
PawrRattransient cerebral ischemia  ISOPawr (Mus musculus)9835381protein:increased expression:cortex and striatum:RGD 
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Original Reference(s)
PawrRatadenocarcinoma  ISOPAWR (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:15877079
PawrRatEndometrial Neoplasms  ISOPAWR (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:15877079
PawrRatProstatic Neoplasms  ISOPAWR (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:15877079

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Original Reference(s)
PawrRat(-)-demecolcine decreases expressionISOPAWR (Homo sapiens)6480464Demecolcine results in decreased expression of PAWR mRNACTDPMID:23649840
PawrRat(R,R,R)-alpha-tocopherol multiple interactionsEXP 6480464alpha-Tocopherol inhibits the reaction [Nerve Growth Factors deficiency results in increased expression of PAWR mRNA] and alpha-Tocopherol inhibits the reaction [Nerve Growth Factors deficiency results in increased expression of PAWR protein]CTDPMID:10428045
PawrRat(S)-colchicine increases expressionEXP 6480464Colchicine results in increased expression of PAWR proteinCTDPMID:12941380
PawrRat(S)-colchicine multiple interactionsEXP 6480464alvocidib inhibits the reaction [Colchicine results in increased expression of PAWR protein]CTDPMID:12941380
PawrRat17beta-estradiol decreases expressionEXP 6480464Estradiol results in decreased expression of PAWR proteinCTDPMID:15964511
PawrRat17beta-estradiol multiple interactionsEXP 6480464Estradiol inhibits the reaction [Nerve Growth Factors deficiency results in increased expression of PAWR mRNA] and Estradiol inhibits the reaction [Nerve Growth Factors deficiency results in increased expression of PAWR protein]CTDPMID:10428045
PawrRat17beta-estradiol increases expressionISOPAWR (Homo sapiens)6480464Estradiol results in increased expression of PAWR mRNA and Estradiol results in increased expression of PAWR proteinCTDPMID:20106945 and PMID:20945400
PawrRat17beta-estradiol multiple interactionsISOPAWR (Homo sapiens)6480464EGF protein inhibits the reaction [Estradiol results in decreased expression of PAWR mRNA]CTDPMID:24758408
PawrRat17beta-estradiol decreases expressionISOPAWR (Homo sapiens)6480464Estradiol results in decreased expression of PAWR mRNACTDPMID:24758408
PawrRat1H-pyrazole increases expressionISOPawr (Mus musculus)6480464pyrazole results in increased expression of PAWR mRNACTDPMID:17945193
PawrRat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of PAWR mRNACTDPMID:34747641
PawrRat2-butoxyethanol increases expressionISOPawr (Mus musculus)6480464n-butoxyethanol results in increased expression of PAWR mRNACTDPMID:19812364
PawrRat3H-1,2-dithiole-3-thione decreases expressionEXP 64804641 and 2-dithiol-3-thione results in decreased expression of PAWR mRNACTDPMID:19162173
PawrRat4-hydroxyphenyl retinamide increases expressionISOPawr (Mus musculus)6480464Fenretinide results in increased expression of PAWR mRNACTDPMID:28973697
PawrRat4-phenylbutyric acid decreases expressionISOPAWR (Homo sapiens)64804644-phenylbutyric acid results in decreased expression of PAWR mRNACTDPMID:14583596
PawrRat7,9-dihydro-1H-purine-2,6,8(3H)-trione multiple interactionsEXP 6480464Uric Acid inhibits the reaction [Nerve Growth Factors deficiency results in increased expression of PAWR mRNA] and Uric Acid inhibits the reaction [Nerve Growth Factors deficiency results in increased expression of PAWR protein]CTDPMID:10428045
PawrRatacrolein multiple interactionsISOPAWR (Homo sapiens)6480464[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in increased oxidation of PAWR mRNA and [Air Pollutants results in increased abundance of [Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone]] which results in increased oxidation of PAWR mRNACTDPMID:32699268
PawrRataflatoxin B1 increases expressionISOPAWR (Homo sapiens)6480464Aflatoxin B1 results in increased expression of PAWR mRNACTDPMID:27153756
PawrRatAflatoxin B2 alpha increases methylationISOPAWR (Homo sapiens)6480464aflatoxin B2 results in increased methylation of PAWR intronCTDPMID:30157460
PawrRatall-trans-retinoic acid affects localizationISOPAWR (Homo sapiens)6480464Tretinoin affects the localization of PAWR proteinCTDPMID:12644474

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Biological Process
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Original Reference(s)
PawrRatactin filament bundle assembly involved_inIDA 8554822PMID:16229834UniProt 
PawrRatapoptotic process involved_inIEAUniProtKB-KW:KW-00531600115GO_REF:0000043UniProtGO_REF:0000043
PawrRatapoptotic process involved_inIDA 8554822PMID:16229834UniProt 
PawrRatapoptotic process involved_inIEAInterPro:IPR0261171600115GO_REF:0000002InterProGO_REF:0000002
PawrRatapoptotic signaling pathway acts_upstream_of_or_withinISOPawr (Mus musculus)1624291MGI:1197015 more ...RGDPMID:12917339
PawrRatcalcium ion import across plasma membrane  IDA 9835370 RGD 
PawrRatcellular response to estradiol stimulus  IEP 9835341 RGD 
PawrRatcellular response to follicle-stimulating hormone stimulus  IEP 9835345 RGD 
PawrRatcellular response to interleukin-1  IEP 9835367 RGD 
PawrRatcellular response to vitamin E  IEP 9835341 RGD 
PawrRatdetection of mechanical stimulus involved in sensory perception of pain  IDA 9835398 RGD 
PawrRatdetection of temperature stimulus involved in sensory perception of pain  IDA 9835416 RGD 
PawrRatnegative regulation of B cell proliferation acts_upstream_of_or_withinISOPawr (Mus musculus)1624291MGI:2678021 PMID:12970181RGDPMID:12970181
PawrRatnegative regulation of calcium ion import  IDA 9835416 RGD 
PawrRatnegative regulation of fibroblast proliferation involved_inISOPawr (Mus musculus)1624291 PMID:25472717RGDPMID:25472717
PawrRatnegative regulation of gene expression involved_inISOPawr (Mus musculus)1624291 PMID:25472717RGDPMID:25472717
PawrRatnegative regulation of T cell proliferation acts_upstream_of_or_withinISOPawr (Mus musculus)1624291MGI:2678021 PMID:12970181RGDPMID:12970181
PawrRatnegative regulation of T cell receptor signaling pathway acts_upstream_of_or_withinISOPawr (Mus musculus)1624291MGI:2678021 PMID:12970181RGDPMID:12970181
PawrRatnegative regulation of transcription by RNA polymerase II involved_inISOPawr (Mus musculus)1624291 PMID:25472717RGDPMID:25472717
PawrRatpositive regulation of action potential  IDA 9835398 RGD 
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Cellular Component
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Original Reference(s)
PawrRatactin cytoskeleton located_inISOPAWR (Homo sapiens)1624291 RGDGO_REF:0000052
PawrRatactin filament located_inIDA 9835355 RGD 
PawrRatactin filament is_active_inIBAPANTHER:PTN001031308 and Pawr (Rattus norvegicus)1600115GO_REF:0000033GO_CentralGO_REF:0000033
PawrRatactin filament located_inIDA 8554822PMID:16229834UniProt 
PawrRataxon  IDA 9835383 RGD 
PawrRatchromatin located_inISOPawr (Mus musculus)1624291 PMID:25472717RGDPMID:25472717
PawrRatcytoplasm located_inISOPAWR (Homo sapiens)1624291 PMID:14627703RGDPMID:14627703
PawrRatcytoplasm is_active_inIBAMGI:2149961 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
PawrRatcytoplasm located_inIEAUniProtKB-SubCell:SL-00861600115GO_REF:0000044UniProtGO_REF:0000044
PawrRatcytoplasm located_inISOPawr (Mus musculus)1624291 PMID:14627703RGDPMID:14627703
PawrRatcytoplasm located_inIEAUniProtKB-KW:KW-09631600115GO_REF:0000043UniProtGO_REF:0000043
PawrRatcytosol located_inISOPAWR (Homo sapiens)1624291 RGDGO_REF:0000052
PawrRatneuronal cell body  IDA 9835366 RGD 
PawrRatnucleus located_inISOPAWR (Homo sapiens)1624291 PMID:14627703RGDPMID:14627703
PawrRatnucleus located_inIEAUniProtKB-KW:KW-05391600115GO_REF:0000043UniProtGO_REF:0000043
PawrRatnucleus located_inIEAUniProtKB-SubCell:SL-01911600115GO_REF:0000044UniProtGO_REF:0000044
PawrRatnucleus located_inISOPawr (Mus musculus)1624291 PMID:12917339 and PMID:14627703RGDPMID:12917339 and PMID:14627703
PawrRatplasma membrane located_inISOPAWR (Homo sapiens)1624291 RGDGO_REF:0000052
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Imported Annotations - PID (archival)

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Original Reference(s)
PawrRatceramide signaling pathway  ISOPAWR (Homo sapiens)6484113 PIDPID:200119

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#
Reference Title
Reference Citation
1. Protease-activated receptor-4: a novel mechanism of inflammatory pain modulation. Asfaha S, etal., Br J Pharmacol. 2007 Jan;150(2):176-85. Epub 2006 Dec 18.
2. Immunohistochemical analysis of the proapoptotic protein Par-4 in normal rat tissues. Boghaert ER, etal., Cell Growth Differ. 1997 Aug;8(8):881-90.
3. Par-4-mediated recruitment of Amida to the actin cytoskeleton leads to the induction of apoptosis. Boosen M, etal., Exp Cell Res. 2005 Dec 10;311(2):177-91. Epub 2005 Oct 14.
4. The tumor suppressor Par-4 activates an extrinsic pathway for apoptosis. Burikhanov R, etal., Cell. 2009 Jul 23;138(2):377-88. doi: 10.1016/j.cell.2009.05.022.
5. Prostate apoptosis response-4 mediates trophic factor withdrawal-induced apoptosis of hippocampal neurons: actions prior to mitochondrial dysfunction and caspase activation. Chan SL, etal., J Neurochem. 1999 Aug;73(2):502-12.
6. Evidence for the involvement of Par-4 in ischemic neuron cell death. Culmsee C, etal., J Cereb Blood Flow Metab. 2001 Apr;21(4):334-43.
7. Regulation of the proapoptotic functions of prostate apoptosis response-4 (Par-4) by casein kinase 2 in prostate cancer cells. de Thonel A, etal., Cell Death Dis. 2014 Jan 23;5:e1016. doi: 10.1038/cddis.2013.532.
8. Regional expression of Par-4 mRNA and protein after fluid percussion brain injury in the rat. Dhillon HS, etal., Exp Neurol. 2001 Jul;170(1):140-8.
9. Prostate apoptosis response-4 production in synaptic compartments following apoptotic and excitotoxic insults: evidence for a pivotal role in mitochondrial dysfunction and neuronal degeneration. Duan W, etal., J Neurochem. 1999 Jun;72(6):2312-22.
10. Long-term melatonin or 17beta-estradiol supplementation alleviates oxidative stress in ovariectomized adult rats. Feng Z and Zhang JT, Free Radic Biol Med. 2005 Jul 15;39(2):195-204. Epub 2005 Mar 25.
11. Prostate apoptosis response-4 is expressed in normal cholangiocytes, is down-regulated in human cholangiocarcinoma, and promotes apoptosis of neoplastic cholangiocytes when induced pharmacologically. Franchitto A, etal., Am J Pathol. 2010 Oct;177(4):1779-90. doi: 10.2353/ajpath.2010.091171. Epub 2010 Aug 19.
12. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
13. Pro-apoptotic Par-4 and dopamine D2 receptor in temporal cortex in schizophrenia, bipolar disorder and major depression. Glantz LA, etal., Schizophr Res. 2010 May;118(1-3):292-9. doi: 10.1016/j.schres.2009.12.027. Epub 2010 Jan 13.
14. Regulation of the expression of prostate apoptosis response protein 4 (Par-4) in rat granulosa cells. Gonzalez IH, etal., Apoptosis. 2007 Apr;12(4):769-79.
15. Par-4 is a mediator of neuronal degeneration associated with the pathogenesis of Alzheimer disease. Guo Q, etal., Nat Med. 1998 Aug;4(8):957-62.
16. Focal ischemia induces expression of protease-activated receptor1 (PAR1) and PAR3 on microglia and enhances PAR4 labeling in the penumbra. Henrich-Noack P, etal., Brain Res. 2006 Jan 27;1070(1):232-41. Epub 2006 Jan 3.
17. Cellular expression pattern of the protease-activated receptor 4 in the hippocampus in naive rats and after global ischaemia. Henrich-Noack P, etal., J Neurosci Res. 2010 Mar;88(4):850-7. doi: 10.1002/jnr.22261.
18. Neuroprotective effect of ghrelin is associated with decreased expression of prostate apoptosis response-4. Hwang S, etal., Endocr J. 2009;56(4):609-17. Epub 2009 Apr 7.
19. Differential expression, time course and distribution of four PARs in rats with endotoxin-induced acute lung injury. Jesmin S, etal., Inflammation. 2007 Apr;30(1-2):14-27. Epub 2006 Nov 30.
20. Dual modulation by thrombin of the motility of rat oesophageal muscularis mucosae via two distinct protease-activated receptors (PARs): a novel role for PAR-4 as opposed to PAR-1. Kawabata A, etal., Br J Pharmacol. 2000 Oct;131(3):578-84.
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PMID:8943350   PMID:10580117   PMID:12897127   PMID:12917339   PMID:12970181   PMID:14627703   PMID:15246161   PMID:15657440   PMID:15671026   PMID:15831492   PMID:18505470   PMID:19490121  
PMID:19625447   PMID:20369315   PMID:25472717   PMID:29854833   PMID:33450132  



Pawr
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8745,531,480 - 45,611,492 (+)NCBIGRCr8
mRatBN7.2743,645,028 - 43,725,033 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl743,645,084 - 43,725,028 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx745,554,243 - 45,635,692 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0747,757,364 - 47,838,790 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0747,535,105 - 47,616,535 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0751,273,764 - 51,353,700 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl751,273,771 - 51,353,068 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0751,286,663 - 51,366,383 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4747,040,162 - 47,119,613 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1747,060,432 - 47,139,881 (+)NCBI
Celera740,512,247 - 40,591,588 (+)NCBICelera
Cytogenetic Map7q21NCBI
PAWR
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381279,584,879 - 79,690,964 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1279,574,979 - 79,690,964 (-)EnsemblGRCh38hg38GRCh38
GRCh371279,978,659 - 80,084,744 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361278,509,876 - 78,608,921 (-)NCBINCBI36Build 36hg18NCBI36
Build 341278,488,214 - 78,587,258NCBI
Celera1279,652,459 - 79,751,312 (-)NCBICelera
Cytogenetic Map12q21.2NCBI
HuRef1277,042,009 - 77,141,117 (-)NCBIHuRef
CHM1_11279,952,168 - 80,051,122 (-)NCBICHM1_1
T2T-CHM13v2.01279,563,553 - 79,669,620 (-)NCBIT2T-CHM13v2.0
Pawr
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3910108,168,050 - 108,250,708 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl10108,167,982 - 108,250,101 (+)EnsemblGRCm39 Ensembl
GRCm3810108,332,189 - 108,414,391 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl10108,332,121 - 108,414,240 (+)EnsemblGRCm38mm10GRCm38
MGSCv3710107,769,245 - 107,851,447 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3610107,736,299 - 107,817,863 (+)NCBIMGSCv36mm8
Celera10110,266,638 - 110,348,648 (+)NCBICelera
Cytogenetic Map10D1NCBI
cM Map1056.43NCBI
Pawr
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540518,434,711 - 18,540,710 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540518,434,711 - 18,540,710 (-)NCBIChiLan1.0ChiLan1.0
PAWR
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21087,634,172 - 87,743,476 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11287,630,560 - 87,739,846 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01277,114,282 - 77,224,116 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11279,964,693 - 80,071,088 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1279,969,517 - 80,070,796 (-)Ensemblpanpan1.1panPan2
PAWR
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11522,114,014 - 22,159,287 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1522,543,122 - 22,644,822 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01522,466,453 - 22,568,184 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1522,468,188 - 22,568,833 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11522,054,871 - 22,156,503 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01522,115,634 - 22,217,474 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01522,355,750 - 22,457,672 (-)NCBIUU_Cfam_GSD_1.0
Pawr
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494538,166,185 - 38,266,605 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936698650,953 - 747,057 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936698650,225 - 746,593 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PAWR
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl5101,693,246 - 101,797,838 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.15101,693,145 - 101,797,842 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.25106,705,487 - 106,742,756 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PAWR
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11175,132,547 - 75,219,633 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1175,133,186 - 75,219,072 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666037170,232,946 - 170,321,286 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pawr
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475018,562,221 - 18,705,540 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475018,562,270 - 18,710,397 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Pawr
611 total Variants

Predicted Target Of
Summary Value
Count of predictions:501
Count of miRNA genes:255
Interacting mature miRNAs:313
Transcripts:ENSRNOT00000008222
Prediction methods:Microtar, Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 32 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1354644Spl4Serum phospholipid level QTL 44.9blood phospholipid amount (VT:0006084)blood phospholipid level (CMO:0001169)71965431749753746Rat
7411569Bw137Body weight QTL 1370.001body mass (VT:0001259)body weight gain (CMO:0000420)72192119566921195Rat
10053722Scort27Serum corticosterone level QTL 272.410.0083blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)74322875088228750Rat
1641885Alcrsp9Alcohol response QTL 9alcohol metabolism trait (VT:0015089)blood ethanol level (CMO:0000535)72409960669099606Rat
1578652Bmd15Bone mineral density QTL 155.2femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)7986646760460686Rat
9590102Sffal5Serum free fatty acids level QTL 58.620.001blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)7532901950329019Rat
631503Bp102Blood pressure QTL 1021.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)7144822433Rat
1549840Bss5Bone structure and strength QTL 59.8femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)72475184169751841Rat
10755438Coatc9Coat color QTL 90coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)7352928048529280Rat
1300127Srn1Serum renin concentration QTL 13.87blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)72940968384928080Rat

1 to 10 of 32 rows
RH129154  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2743,724,790 - 43,724,976 (-)MAPPERmRatBN7.2
Rnor_6.0751,273,823 - 51,274,008NCBIRnor6.0
Rnor_5.0751,286,722 - 51,286,907UniSTSRnor5.0
RGSC_v3.4747,119,373 - 47,119,558UniSTSRGSC3.4
Celera740,591,348 - 40,591,533UniSTS
RH 3.4 Map7351.71UniSTS
Cytogenetic Map7q21UniSTS
AU047800  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2743,646,571 - 43,646,802 (-)MAPPERmRatBN7.2
Rnor_6.0751,352,041 - 51,352,271NCBIRnor6.0
Rnor_5.0751,364,748 - 51,364,978UniSTSRnor5.0
RGSC_v3.4747,040,959 - 47,041,189UniSTSRGSC3.4
Celera740,513,044 - 40,513,274UniSTS
Cytogenetic Map7q21UniSTS
AU047769  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2743,646,548 - 43,646,803 (-)MAPPERmRatBN7.2
Rnor_6.0751,352,040 - 51,352,294NCBIRnor6.0
Rnor_5.0751,364,747 - 51,365,001UniSTSRnor5.0
RGSC_v3.4747,040,936 - 47,041,190UniSTSRGSC3.4
Celera740,513,021 - 40,513,275UniSTS
Cytogenetic Map7q21UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000008222   ⟹   ENSRNOP00000008222
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl743,645,775 - 43,725,028 (+)Ensembl
Rnor_6.0 Ensembl751,273,771 - 51,353,068 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000096379   ⟹   ENSRNOP00000093356
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl743,645,841 - 43,725,028 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000113713   ⟹   ENSRNOP00000085170
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl743,645,084 - 43,725,028 (+)Ensembl
RefSeq Acc Id: NM_033485   ⟹   NP_277020
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8745,532,239 - 45,611,492 (+)NCBI
mRatBN7.2743,645,775 - 43,725,031 (+)NCBI
Rnor_6.0751,273,768 - 51,353,068 (-)NCBI
Rnor_5.0751,286,663 - 51,366,383 (-)NCBI
RGSC_v3.4747,040,162 - 47,119,613 (+)RGD
Celera740,512,247 - 40,591,588 (+)RGD
Sequence:
RefSeq Acc Id: XM_006241317   ⟹   XP_006241379
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8745,531,480 - 45,611,492 (+)NCBI
mRatBN7.2743,645,029 - 43,725,033 (+)NCBI
Rnor_6.0751,273,764 - 51,353,700 (-)NCBI
Rnor_5.0751,286,663 - 51,366,383 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039079857   ⟹   XP_038935785
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8745,531,480 - 45,611,492 (+)NCBI
mRatBN7.2743,645,028 - 43,725,033 (+)NCBI
Protein RefSeqs NP_277020 (Get FASTA)   NCBI Sequence Viewer  
  XP_006241379 (Get FASTA)   NCBI Sequence Viewer  
  XP_038935785 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA16492 (Get FASTA)   NCBI Sequence Viewer  
  EDM16758 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000085170
  ENSRNOP00000107478
GenBank Protein Q62627 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_277020   ⟸   NM_033485
- UniProtKB: Q62627 (UniProtKB/Swiss-Prot),   A6IGE0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006241379   ⟸   XM_006241317
- Peptide Label: isoform X1
- UniProtKB: Q62627 (UniProtKB/Swiss-Prot),   A6IGE0 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000008222   ⟸   ENSRNOT00000008222
RefSeq Acc Id: XP_038935785   ⟸   XM_039079857
- Peptide Label: isoform X1
- UniProtKB: Q62627 (UniProtKB/Swiss-Prot),   A6IGE0 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000085170   ⟸   ENSRNOT00000113713

Name Modeler Protein Id AA Range Protein Structure
AF-Q62627-F1-model_v2 AlphaFold Q62627 1-332 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13695182
Promoter ID:EPDNEW_R5707
Type:single initiation site
Name:Pawr_1
Description:pro-apoptotic WT1 regulator
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0751,353,084 - 51,353,144EPDNEW


1 to 17 of 17 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-34166 BioCyc
Ensembl Genes ENSRNOG00000005917 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000113713 ENTREZGENE
  ENSRNOT00000167387 ENTREZGENE
InterPro Par-4 UniProtKB/Swiss-Prot
KEGG Report rno:64513 UniProtKB/Swiss-Prot
NCBI Gene 64513 ENTREZGENE
PANTHER PRKC APOPTOSIS WT1 REGULATOR PROTEIN UniProtKB/Swiss-Prot
  PTHR15093 UniProtKB/Swiss-Prot
PhenoGen Pawr PhenoGen
RatGTEx ENSRNOG00000005917 RatGTEx
TIGR TC206563
UniProt A0A8I6A135_RAT UniProtKB/TrEMBL
  A0A8I6GK93_RAT UniProtKB/TrEMBL
  A6IGE0 ENTREZGENE, UniProtKB/TrEMBL
  G3V6S1_RAT UniProtKB/TrEMBL
  PAWR_RAT UniProtKB/Swiss-Prot, ENTREZGENE
1 to 17 of 17 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-03-16 Pawr  pro-apoptotic WT1 regulator  Pawr  PRKC, apoptosis, WT1, regulator  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2002-06-10 Pawr  PRKC, apoptosis, WT1, regulator      Name updated 70584 APPROVED

Note Type Note Reference
gene_expression expressed in prostate 68876