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Gene: Slc24a2 (solute carrier family 24 member 2) Rattus norvegicus

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Symbol:

Slc24a2

Name:

solute carrier family 24 member 2

RGD ID:

628650

Description:

Enables calcium, potassium:sodium antiporter activity. Involved in calcium ion transmembrane transport and protein-containing complex assembly. Predicted to be located in membrane. Predicted to be active in plasma membrane; postsynapse; and presynapse. Orthologous to human SLC24A2 (solute carrier family 24 member 2); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; visual phototransduction pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; acetamide.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

na(+)/K(+)/Ca(2+)-exchange protein 2; Nckx2; potassium-dependent sodium-calcium exchanger; retinal cone Na-Ca+K exchanger; sodium/potassium/calcium exchanger 2; solute carrier family 24 (sodium/potassium/calcium exchanger), member 2; solute carrier family 24, member 2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SLC24A2 (solute carrier family 24 member 2)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OrthoDB, Panther, PhylomeDB
Mus musculus (house mouse):	Slc24a2 (solute carrier family 24 (sodium/potassium/calcium exchanger), member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Slc24a2 (solute carrier family 24 member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SLC24A2 (solute carrier family 24 member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SLC24A2 (solute carrier family 24 member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Slc24a2 (solute carrier family 24 member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SLC24A2 (solute carrier family 24 member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SLC24A2 (solute carrier family 24 member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Slc24a2 (solute carrier family 24 member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Slc24a2 (solute carrier family 24 member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	RPS19 (ribosomal protein S19)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	SLC24A2 (solute carrier family 24 member 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Slc24a2 (solute carrier family 24 (sodium/potassium/calcium exchanger), member 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Slc24a2 (solute carrier family 24 (sodium/potassium/calcium exchanger), member 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Danio rerio (zebrafish):	slc24a2 (solute carrier family 24 member 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	slc24a2 (solute carrier family 24 member 2)	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	ncx-4	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	ncx-4	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Nckx30C	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Nckx30C	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	ncx-5	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	ncx-5	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	slc24a2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	slc24a2	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	106,543,867 - 106,787,810 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	5	106,543,874 - 106,787,780 (-)	Ensembl				GRCr8
mRatBN7.2	5	101,497,916 - 101,741,840 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	101,502,278 - 101,739,337 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	5	103,875,413 - 104,113,006 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	105,665,961 - 105,903,464 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	105,699,555 - 105,944,125 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	105,336,287 - 105,579,959 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	105,336,262 - 105,582,375 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	5	109,323,070 - 109,564,102 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	5	106,295,254 - 106,537,714 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	5	101,349,538 - 101,587,410 (+)	NCBI		Celera
RGSC_v3.1	5	106,300,479 - 106,542,940 (-)	NCBI
Cytogenetic Map	5	q32	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(2,4,5-trichlorophenoxy)acetic acid (ISO)

1,2-dichloroethane (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

acetamide (EXP)

aflatoxin B1 (ISO)

amitrole (EXP)

ammonium chloride (EXP)

atrazine (EXP)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

Butylbenzyl phthalate (ISO)

calcitriol (ISO)

calcium atom (EXP)

calcium(0) (EXP)

CGP 52608 (ISO)

chlorpyrifos (EXP)

ciglitazone (EXP)

cocaine (EXP)

copper atom (EXP)

copper(0) (EXP)

Cuprizon (EXP)

dimethyl sulfoxide (EXP)

flavonoids (EXP)

folic acid (ISO)

fulvestrant (ISO)

genistein (ISO)

gentamycin (EXP)

indole-3-methanol (EXP)

iron dichloride (ISO)

methimazole (EXP)

methoxychlor (EXP)

Muraglitazar (EXP)

N,N-diethyl-m-toluamide (EXP)

N-acetyl-L-cysteine (EXP)

N-nitrosodiethylamine (EXP)

okadaic acid (ISO)

ozone (ISO)

pentanal (ISO)

permethrin (EXP)

potassium dichromate (ISO)

pregnenolone 16alpha-carbonitrile (EXP)

sodium arsenite (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

trichloroethene (EXP)

troglitazone (EXP)

valproic acid (EXP,ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

calcium ion import (IEA,ISO)

calcium ion import across plasma membrane (IEA,ISO)

calcium ion transmembrane transport (IBA,IDA,IEA,IMP,ISO)

calcium ion transport (IEA,ISO)

cellular response to high light intensity (IEA,ISO)

cone photoresponse recovery (IEA,ISO)

intracellular calcium ion homeostasis (IBA,ISO)

learning (ISO)

long-term synaptic depression (IBA,ISO)

long-term synaptic potentiation (IBA,ISO)

memory (ISO)

monoatomic ion transmembrane transport (ISO)

monoatomic ion transport (IEA)

phototransduction (ISO)

potassium ion transmembrane transport (IEA,ISO)

potassium ion transport (IEA)

protein-containing complex assembly (IMP)

sodium ion transmembrane transport (IEA,ISO)

sodium ion transport (IEA)

transmembrane transport (IEA)

Cellular Component

membrane (IEA,ISO)

plasma membrane (IBA,IEA,ISO)

postsynapse (IEA,ISO)

presynapse (IEA,ISO)

Molecular Function

antiporter activity (IEA)

calcium channel activity (IBA,IEA,ISO)

calcium, potassium:sodium antiporter activity (IBA,IDA,IEA,IMP,ISO)

symporter activity (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

calcium transport pathway (ISO)

calcium/calcium-mediated signaling pathway (ISO)

visual phototransduction pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Na+/Ca2+-K+ exchangers (NCKX): functional properties and physiological roles.	Altimimi HF and Schnetkamp PP, Channels (Austin). 2007 Mar-Apr;1(2):62-9. Epub 2007 Apr 30.
2.	Topological studies of the rat brain K+-dependent Na+/Ca2+ exchanger NCKX2.	Cai X, etal., Ann N Y Acad Sci 2002 Nov;976:90-3.
3.	A novel topology and redox regulation of the rat brain K+-dependent Na+/Ca2+ exchanger, NCKX2.	Cai X, etal., J Biol Chem 2002 Dec 13;277(50):48923-30.
4.	Electrophysiological characterization and ionic stoichiometry of the rat brain K(+)-dependent NA(+)/CA(2+) exchanger, NCKX2.	Dong H, etal., J Biol Chem. 2001 Jul 13;276(28):25919-28. Epub 2001 May 7.
5.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
6.	Preferential expression of plasmalemmal K-dependent Na+/Ca2+ exchangers in neurons versus astrocytes.	Kiedrowski L, etal., Neuroreport 2002 Aug 27;13(12):1529-32.
7.	K+-dependent Na+/Ca2+ exchange is a major Ca2+ clearance mechanism in axon terminals of rat neurohypophysis.	Lee SH, etal., J Neurosci 2002 Aug 15;22(16):6891-9.
8.	Na+/Ca2+ exchangers: three mammalian gene families control Ca2+ transport.	Lytton J Biochem J. 2007 Sep 15;406(3):365-82.
9.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
10.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
11.	Molecular cloning of a novel potassium-dependent sodium-calcium exchanger from rat brain.	Tsoi M, etal., J Biol Chem 1998 Feb 13;273(7):4155-62.
12.	Different cation sensitivities and binding site domains of Na+-Ca2+-K+ and Na+-Ca2+ exchangers.	Uehara A, etal., J Cell Physiol. 2005 May;203(2):420-8.

Additional References at PubMed

PMID:10662833	PMID:16407245	PMID:17038313	PMID:18166528	PMID:22871113	PMID:26631410	PMID:32582988

Genomics

Comparative Map Data

Slc24a2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	106,543,867 - 106,787,810 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	5	106,543,874 - 106,787,780 (-)	Ensembl				GRCr8
mRatBN7.2	5	101,497,916 - 101,741,840 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	101,502,278 - 101,739,337 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	5	103,875,413 - 104,113,006 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	105,665,961 - 105,903,464 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	105,699,555 - 105,944,125 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	105,336,287 - 105,579,959 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	105,336,262 - 105,582,375 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	5	109,323,070 - 109,564,102 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	5	106,295,254 - 106,537,714 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	5	101,349,538 - 101,587,410 (+)	NCBI		Celera
RGSC_v3.1	5	106,300,479 - 106,542,940 (-)	NCBI
Cytogenetic Map	5	q32	NCBI

SLC24A2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	19,507,455 - 20,307,892 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	19,507,452 - 19,789,119 (-)	Ensembl			hg38	GRCh38
GRCh37	9	19,507,453 - 19,789,035 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	19,505,978 - 19,776,926 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	9	19,505,977 - 19,776,926	NCBI
Celera	9	19,433,508 - 19,714,554 (-)	NCBI		Celera
Cytogenetic Map	9	p22.1-p21.3	NCBI
HuRef	9	19,468,902 - 19,749,276 (-)	NCBI		HuRef
CHM1_1	9	19,507,294 - 19,786,814 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	9	19,520,160 - 20,321,675 (-)	NCBI		T2T-CHM13v2.0

Slc24a2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	86,901,361 - 87,148,780 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	86,901,361 - 87,148,714 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	4	86,983,124 - 87,230,652 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	86,983,124 - 87,230,477 (-)	Ensembl			mm10	GRCm38
MGSCv37	4	86,629,028 - 86,876,444 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	4	86,461,003 - 86,701,654 (-)	NCBI		MGSCv36	mm8
Celera	4	85,505,583 - 85,755,220 (-)	NCBI		Celera
Cytogenetic Map	4	C4	NCBI
cM Map	4	40.69	NCBI

Slc24a2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955434	21,873,091 - 22,091,177 (-)	Ensembl
ChiLan1.0	NW_004955434	21,871,319 - 22,091,125 (-)	NCBI	ChiLan1.0	ChiLan1.0

SLC24A2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	104,762,654 - 105,039,010 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	104,768,598 - 105,044,955 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	19,317,132 - 19,593,503 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	19,808,591 - 20,251,387 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	19,814,244 - 20,249,225 (-)	Ensembl			panPan2	panpan1.1

SLC24A2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	11	39,273,285 - 39,521,223 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	11	39,278,370 - 39,519,222 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	11	37,927,494 - 38,178,882 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	11	40,203,164 - 40,454,628 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	11	40,209,212 - 40,454,579 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	11	38,895,568 - 39,147,258 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	11	38,693,264 - 38,938,019 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	11	39,327,164 - 39,578,919 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Slc24a2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	153,700,301 - 153,916,436 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936652	1,378,045 - 1,583,403 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936652	1,375,292 - 1,585,718 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLC24A2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	203,059,588 - 203,333,781 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	1	203,059,563 - 203,336,442 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	226,912,944 - 226,979,819 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3
Sscrofa10.2	1	226,645,477 - 226,845,623 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SLC24A2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	59,962,744 - 60,229,539 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	59,964,749 - 60,224,816 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666038	48,071,391 - 48,345,344 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Slc24a2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624736	23,496,268 - 23,733,259 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624736	23,488,228 - 23,735,657 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Slc24a2
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	1	66,791,134 - 67,016,689 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Slc24a2
2299 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	935
Count of miRNA genes:	308
Interacting mature miRNAs:	434
Transcripts:	ENSRNOT00000010827
Prediction methods:	Microtar, Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1357396	Bw44	Body weight QTL 44	4.19		body mass (VT:0001259)	body weight (CMO:0000012)	5	73779642	118779642	Rat
1331796	Thshl2	Thyroid stimulating hormone level QTL 2	2.3		blood thyroid-stimulating hormone amount (VT:0005119)	serum thyroid stimulating hormone level (CMO:0001248)	5	102105698	152749382	Rat
2303586	Gluco52	Glucose level QTL 52	2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	100826632	145826632	Rat
1549845	Scl44	Serum cholesterol level QTL 44	6		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	44924861	153890773	Rat
70212	Niddm25	Non-insulin dependent diabetes mellitus QTL 25	3.54		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	38207390	136631402	Rat
1298070	Scl18	Serum cholesterol level QTL 18	3.7		blood LDL cholesterol amount (VT:0000181)	calculated plasma low density lipoprotein cholesterol level (CMO:0001245)	5	84630798	129630798	Rat
61452	Ciaa5	CIA Autoantibody QTL 5	3.5		blood autoantibody amount (VT:0003725)	calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)	5	99905133	172190305	Rat
1331801	Rf33	Renal function QTL 33	4.149		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	5	48523123	134369373	Rat
2302381	Bw84	Body weight QTL 84	4.47		body mass (VT:0001259)	body mass index (BMI) (CMO:0000105)	5	73779642	118779642	Rat
1357402	Bw46	Body weight QTL 46	4.47		body mass (VT:0001259)	body mass index (BMI) (CMO:0000105)	5	73779642	118779642	Rat
7411582	Foco3	Food consumption QTL 3	7.5	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	5	92583776	137583776	Rat
61393	Bp7	Blood pressure QTL 7	4.5	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	65089051	166764498	Rat
1598859	Cm66	Cardiac mass QTL 66	2		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	5	84630798	129630798	Rat
1578766	Tcas11	Tongue tumor susceptibility QTL 11	4.12		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	5	51657967	166600247	Rat
1582212	Livw2	Liver weight QTL 2	3.5	0.0004	liver mass (VT:0003402)	liver weight to body weight ratio (CMO:0000633)	5	104018576	124314782	Rat
7411564	Bw135	Body weight QTL 135		0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	5	92583776	137583776	Rat
8657050	Bw146	Body weight QTL 146	19.84	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	5	98972960	143972960	Rat
1576312	Emca8	Estrogen-induced mammary cancer QTL 8	4.1		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	55124766	172190305	Rat
7411601	Foco12	Food consumption QTL 12	19.7	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	5	92583776	137583776	Rat
2303618	Vencon1	Ventilatory control QTL 1	3.8		respiration trait (VT:0001943)	oxygen consumption (CMO:0002169)	5	100826632	145826632	Rat
7394708	Emca11	Estrogen-induced mammary cancer QTL 11			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	73176602	118176602	Rat
1598846	Bp293	Blood pressure QTL 293	3.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	84630798	129630798	Rat
7394710	Emca12	Estrogen-induced mammary cancer QTL 12			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	94034903	139034903	Rat
1578673	Bmd13	Bone mineral density QTL 13	4.9		femur mineral mass (VT:0010011)	trabecular volumetric bone mineral density (CMO:0001729)	5	69474415	114474415	Rat
1358909	Kidm25	Kidney mass QTL 25	1.87		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	5	95062526	133270832	Rat
70189	Mcs5	Mammary carcinoma susceptibility QTL 5	10.51		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	60601597	137492949	Rat
2290448	Scl54	Serum cholesterol level QTL 54	2.93		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	36460764	136631402	Rat
61426	Scl2	Serum cholesterol level QTL 2	7.3	0.001	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	64589016	109589016	Rat
1354598	Srn6	Serum renin concentration QTL 6	3.8		blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	5	74335621	156302135	Rat
1600362	Mcs19	Mammary carcinoma susceptibility QTL 19	2.5		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	82032155	127032155	Rat
1298086	Bp156	Blood pressure QTL 156			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	89369373	134369373	Rat
2290005	Mcs24	Mammary carcinoma susceptibility QTL 24			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	69835120	114835120	Rat
2306971	Anxrr21	Anxiety related response QTL 21	9.47		fear/anxiety-related behavior trait (VT:1000241)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	5	70969494	136328156	Rat
1358895	Bp254	Blood pressure QTL 254	3.6	0.0003	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	5	97492524	133270832	Rat
2312671	Scl64	Serum cholesterol level QTL 64		0.001	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	73779642	118779642	Rat
6903316	Bw113	Body weight QTL 113	2	0.0103	body mass (VT:0001259)	body weight (CMO:0000012)	5	92881678	137881678	Rat
1358889	Bp261	Blood pressure QTL 261	2.86		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	5	95062526	133270832	Rat
1358187	Emca1	Estrogen-induced mammary cancer QTL 1	4.4		mammary gland integrity trait (VT:0010552)	post-insult time to mammary tumor formation (CMO:0000345)	5	104262817	153890625	Rat

Markers in Region

D5Got28

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	101,660,429 - 101,660,568 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	105,500,674 - 105,500,812	NCBI	Rnor6.0
Rnor_5.0	5	109,485,162 - 109,485,300	UniSTS	Rnor5.0
RGSC_v3.4	5	106,457,416 - 106,457,554	UniSTS	RGSC3.4
RGSC_v3.4	5	106,457,415 - 106,457,554	RGD	RGSC3.4
Celera	5	101,428,245 - 101,428,383	UniSTS
RGSC_v3.1	5	106,462,642 - 106,462,780	RGD
RH 3.4 Map	5	738.9	UniSTS
RH 3.4 Map	5	738.9	RGD
RH 2.0 Map	5	657.6	RGD
Cytogenetic Map	5	q32	UniSTS

D5Got31

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	101,703,657 - 101,703,889 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	105,544,278 - 105,544,509	NCBI	Rnor6.0
Rnor_5.0	5	109,528,421 - 109,528,652	UniSTS	Rnor5.0
RGSC_v3.4	5	106,502,033 - 106,502,264	UniSTS	RGSC3.4
RGSC_v3.4	5	106,502,032 - 106,502,264	RGD	RGSC3.4
Celera	5	101,384,977 - 101,385,208	UniSTS
RH 3.4 Map	5	745.4	RGD
RH 3.4 Map	5	745.4	UniSTS
Cytogenetic Map	5	q32	UniSTS

D5Uwm23

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	5	106,653,429 - 106,653,613 (+)	Marker Load Pipeline
mRatBN7.2	5	101,607,489 - 101,607,673 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	105,444,977 - 105,445,160	NCBI	Rnor6.0
Rnor_5.0	5	109,431,760 - 109,431,943	UniSTS	Rnor5.0
RGSC_v3.4	5	106,403,190 - 106,403,373	UniSTS	RGSC3.4
Celera	5	101,479,696 - 101,479,879	UniSTS
Cytogenetic Map	5	q32	UniSTS

D5Wox41

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	5	106,548,152 - 106,548,326 (+)	Marker Load Pipeline
mRatBN7.2	5	101,502,201 - 101,502,377 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	105,338,953 - 105,339,126	NCBI	Rnor6.0
Rnor_5.0	5	109,325,736 - 109,325,909	UniSTS	Rnor5.0
RGSC_v3.4	5	106,297,920 - 106,298,093	UniSTS	RGSC3.4
Celera	5	101,584,497 - 101,584,744	UniSTS
Cytogenetic Map	5	q32	UniSTS

AU047371

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	101,621,882 - 101,621,985 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	105,461,768 - 105,461,870	NCBI	Rnor6.0
Rnor_5.0	5	109,446,256 - 109,446,358	UniSTS	Rnor5.0
RGSC_v3.4	5	106,418,860 - 106,418,962	UniSTS	RGSC3.4
Celera	5	101,466,670 - 101,466,742	UniSTS
Cytogenetic Map	5	q32	UniSTS

AI007603

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	101,505,317 - 101,505,509 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	105,342,067 - 105,342,258	NCBI	Rnor6.0
Rnor_5.0	5	109,328,850 - 109,329,041	UniSTS	Rnor5.0
RGSC_v3.4	5	106,301,034 - 106,301,225	UniSTS	RGSC3.4
Celera	5	101,581,365 - 101,581,556	UniSTS
RH 3.4 Map	5	741.6	UniSTS
Cytogenetic Map	5	q32	UniSTS

AU048745

Rat Assembly	Chr	Position (strand)	Source
Cytogenetic Map	5	q32	UniSTS
Cytogenetic Map	13	q24	UniSTS
Cytogenetic Map	6	q32	UniSTS
Cytogenetic Map	17	p12	UniSTS
Cytogenetic Map	16	p14	UniSTS
Cytogenetic Map	13	q26	UniSTS
Cytogenetic Map	10	q22	UniSTS
Cytogenetic Map	7	q11	UniSTS
Cytogenetic Map	8	q24	UniSTS
Cytogenetic Map	5	q21	UniSTS
Cytogenetic Map	4	q24	UniSTS
Cytogenetic Map	2	q11	UniSTS
Cytogenetic Map	1	q54	UniSTS
Cytogenetic Map	1	q36	UniSTS
Cytogenetic Map	18	p11	UniSTS
Cytogenetic Map	13	q13	UniSTS
Cytogenetic Map	10	q24	UniSTS
Cytogenetic Map	8	q31	UniSTS
Cytogenetic Map	3	q21	UniSTS
Cytogenetic Map	13	p13	UniSTS
Cytogenetic Map	1	q21	UniSTS
Cytogenetic Map	11	q23	UniSTS
Cytogenetic Map	10	q31	UniSTS
Cytogenetic Map	16	q12.2	UniSTS
Cytogenetic Map	3	q24	UniSTS
Cytogenetic Map	5	q36	UniSTS
Cytogenetic Map	3	p13	UniSTS

BE113849

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	101,543,131 - 101,543,342 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	105,380,626 - 105,380,836	NCBI	Rnor6.0
Rnor_5.0	5	109,367,409 - 109,367,619	UniSTS	Rnor5.0
RGSC_v3.4	5	106,338,841 - 106,339,051	UniSTS	RGSC3.4
Celera	5	101,543,885 - 101,544,095	UniSTS
RH 3.4 Map	5	742.0	UniSTS
Cytogenetic Map	5	q32	UniSTS

BF415948

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	101,704,072 - 101,704,264 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	105,544,693 - 105,544,884	NCBI	Rnor6.0
Rnor_5.0	5	109,528,836 - 109,529,027	UniSTS	Rnor5.0
RGSC_v3.4	5	106,502,448 - 106,502,639	UniSTS	RGSC3.4
Celera	5	101,384,602 - 101,384,793	UniSTS
RH 3.4 Map	5	739.4	UniSTS
Cytogenetic Map	5	q32	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
9	11	52	158	67	66	35	42	35	6	226	122	7	139	52	70	31	16	16

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_031743	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288501	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288502	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288503	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288504	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288505	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288506	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288507	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288508	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288509	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288510	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AF021923	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF027506	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474094	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000010827 ⟹ ENSRNOP00000010827

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	106,543,874 - 106,787,780 (-)	Ensembl
mRatBN7.2 Ensembl	5	101,502,278 - 101,739,337 (-)	Ensembl
Rnor_6.0 Ensembl	5	105,336,262 - 105,579,959 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000083373 ⟹ ENSRNOP00000074180

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	106,543,874 - 106,787,780 (-)	Ensembl
mRatBN7.2 Ensembl	5	101,502,278 - 101,739,337 (-)	Ensembl
Rnor_6.0 Ensembl	5	105,342,727 - 105,582,375 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000114418 ⟹ ENSRNOP00000092960

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	106,543,874 - 106,787,780 (-)	Ensembl
mRatBN7.2 Ensembl	5	101,502,278 - 101,739,337 (-)	Ensembl

RefSeq Acc Id:

NM_031743 ⟹ NP_113931

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	106,543,867 - 106,787,780 (-)	NCBI
mRatBN7.2	5	101,497,916 - 101,741,840 (-)	NCBI
Rnor_6.0	5	105,336,287 - 105,579,959 (-)	NCBI
Rnor_5.0	5	109,323,070 - 109,564,102 (-)	NCBI
RGSC_v3.4	5	106,295,254 - 106,537,714 (-)	RGD
Celera	5	101,349,538 - 101,587,410 (+)	RGD

Sequence:

show sequence

GTGGTGATAGTTTCCTGTGAAGAGTAAAGATTCCCAATTGTAGAAGAGCCCCATAAGCACCATC
CACTGGGAAGCAAGGAGCAGCATGACAGAGCCGTCTGTGTGAGTCTGAAGTGTGAAGACCACCA
TATCCACCAGAAGATCCAAGATGGATCTCCATCAAAGCGCCACAGTCAGGCTCCTGCAGGAATG
GTGTTCCCATGAGTCACCATCTGGCTGCAGGAGACATTATAATACCAGGAAAAAACTGAAGCTA
ATTCGAGTCATTGGCCTTGTCATGGGCCTGGTAGCCGTGAGCACTGTCCCGTTTTCAATCAGTG
CCTTTACTGAGACATACTCTCAGAACAACAGAGGAGAAGCCAGTGATGTGACGGGCCCTAGGGC
AGCACCCGGTCACCGTCAAAGAACTCTCTTAGACTTAAATGACAAGATTCGAGATTACACCCCA
CAGCCACCTGCTTCTCAGGAAGACCGATCTGAGAACGGTACTGATCACGCCCAGGGAGACTACC
CAAAGGATGTCTTTTCCCTGGAGGAGCGAAGGAAAGGTGCCATCATTCTCCATGTCATCGGAAT
GATCTATATGTTCATAGCCTTAGCCATCGTCTGTGATGAGTTCTTTGTTCCTTCTCTAACTGTC
ATCACTGAAAAACTGGGAATCTCTGATGATGTGGCCGGAGCCACCTTCATGGCCGCAGGCGGGT
CAGCCCCAGAACTTTTCACATCTCTCATAGGGGTTTTCATTGCGCACAGCAACGTGGGCATTGG
CACCATCGTAGGTTCCGCCGTGTTCAATATCCTCTTTGTTATTGGCATGTGTGCTCTGTTTTCT
AGAGAAATCTTAAACCTGACCTGGTGGCCGCTCTTTCGGGATGTGTCCTTCTACATCGTTGATT
TGATCATGTTGATCATATTTTTCCTGGATAACGTTATCATGTGGTGGGAAAGCTTACTCCTCTT
AACAGCTTATTTCGCCTATGTGGTTTTCATGAAGTTCAACGTCCAAGTAGAGAGATGGGTGAAG
CAAATGATAAATCGCAATAAAGTTGTCAAGGTGACAGTGTCAGAAGCCCAAGCCAAGGCATCTA
CAGCTGGGGACAAGGAAGAGCCGACGTTACCGAATAAGCCGCGCCTCCAGCGAGGTGGAAGCTC
TGCTTCCCTCCACAACAGTCTCATGAGGAACAGCATCTTCCAGCTCATGATACACACCCTTGAC
CCACTCGCTGAAGAACTTGGATCATATGGAAAACTAAAATATTATGACACAATGACTGAAGAAG
GGAGGTTCAGAGAAAAAGCTTCAATTCTCCACAAGATTGCCAAGAAGAAATGCCAAGTGGATGA
GAATGAGAGGCAAAATGGAGCTGCCAATCATGTGGATTATGCCGCAGAAAAAATTGAGCTCCCC
AACAGCACGAGCACAGAGGTGGAAATGACTCCATCAAGCGAAGCTTCAGAACCTGTGCAGAATG
GAAACCTCTCTCACAGCATCGAAGCTGCAGACGCCCCGCAGGCCACAGAGACCGCCGAGGAAGA
TGATGACCAGCCCCTCAGCCTGTCCTGGCCGTCCAACACCCGCAAGCAGATCACCTTCCTAATC
GTTCTTCCCATCGTGTTCCCTCTCTGGATCACCTTACCCGACGTCCGCAAACCTGCTTCCAAGA
AGTTCTTCCCTATCACGTTCTTCGGCTCCATCACCTGGATCGCAGTTTTCTCGTACCTGATGGT
GTGGTGGGCACACCAGGTTGGAGAGACAATCGGCATTAGTGAGGAGATCATGGGCCTCACCATC
TTGGCAGCTGGAACCTCTATCCCCGATCTCATCACCAGTGTCATAGTGGCCCGAAAGGGCCTGG
GGGACATGGCTGTGTCCAGCTCCGTTGGAAGCAACATCTTTGACATCACTGTGGGGCTCCCACT
GCCCTGGCTCCTCTACACCATCATCCACAGATTCAAGCCAGTGACTGTCAGCAGCAATGGCCTC
TTCTGTGCCATCGTCCTCCTCTTCATCATGTTGATTTTTGTCATCCTCTCCATCGCCCTCTGCA
AGTGGCGGATGAACAAAATCCTCGGCTTCATCATGTTTGGCCTCTACTTCGCGTTCCTGGTGGT
CAGCGTCCTCCTGGAAGACAAAGTTCTCGAGTGCCCTGTCTCCATCTAGTGGAAAAGCCATATC
TTAAACCAACAGCATGGATGGTCCCTCCCGGCTCTGGGCTCCAGGCTCCTTGCAGTCTTGAGAA
GAGGCAACTTGTGCACAGCCCTGGGAGGCAAGTGTCCCTCCTTGAAAGGTTGGAGGAAGGATGG
ATTCCCACGGGGCCACTCACTTCACAGGCCCCTCACCCTTGCCTGCTGAAATGACTCCGTGTTA
GAGACAAAGAGGACCGTCTCTCCATCCCCACTGACAGGTACTCCTCGCTGGTCAGAGGTACGTT
CATTGTGATGACGCGAAAGAGGACAGAGGCCATACATACATATAAATATTATAAATATATACAC
ATGAGCATACAGATCTTGCCTGTTTCTGTACTATACCTCTCCTCCTATACCTATAGATTAATAC
ATAACTGTACACAAACAGAAAGAAAAATTATATATATATATAAAAACATATATATTTAAGTGCA
AATGCATCTTTTCAGGGATAGCTCTAGTATATTTATAGTACCTATTTGAAGAGGGGCATCAACC
TTCAACCTTCAGTTTGTGCTTTGCCCCTCGAGTGCAAAAGCTGAGTTAACAGAATCAGTAGGCA
AAGCGCTCCTTGCTGTGATCTCTAGCCTGCTTTGGATGGAATAAGTTTAGTGAAATACTTTGCA
GAAAGGAGAGCTTAATAGAGGGAGTCCGTAGGAGCCCCAGTTAGAACCTCTAAAATACTCTCAC
AAGCCAAAAAGAATCACCCTGCTCATCCCCACTGGGGCGCTCTGACACCCCCAGGATTCCGTAA
GACAGAGGTAAAACTCAGACTGACTGACAACCAGGGGGCGGGGAGGGTGCGGCATCTGTTGAGG
GTTAGGCTGTCTTGTTTTGTTTTGTTTTGTTGTAATACCCCAGCATGCAAGTAGATGATATGAA
TGAAAAACCAAATTAGTGATTTTCTAGGACAGCAAAATTATATAAACCGAGCCTATCATGTTCC
AGTGCATGGCCCATTATCATCAAACGAACAAGGGCAATCTTAGCCGTGATTGTCATTTGACAAG
CTTTAATGCCAAGGGCTCCCACACAGTCCAAAGTCCTGCCAAGAGTGCTGAGATGTGTGCTGAG
AAACACCATCCAGCAGAGGTGCTCAGTGGGGGTGGCCACCCGATGGGAACATAGGGCATAGCTC
CTTAGAGCACTTCTCAGTGTGGTCACAAAGGGCTGCAATGTCTAAGGATCATTCCCAATAGAGC
TGAACTAAGGAATGACAGTGCTTGATTGAGGCAGTTCAGGTTTGTTTGCAGAGACATTTAGCCG
GTTTGTGTGTACCTCACCCCACCCCCAGAACAGTTTCCAAGTCCTGTGTCACGGATTTGGTCTG
TAGACTCATGCAACATCTGTATCCCGCCTCTATCATAGCCCCGCCTGGACCTGTAGCATCCCAA
GCACAGTGGAGACTATATATCTTCCATCATTTCTTTACATTACTTTGAAGCAGTCACTCATATC
TTGATCAGCTTCACATGGGGGTAATCTCACTCATGGAGTGTCCCTAAGCTCTGAATGACTTCAA
AGCTCTTGTCTGACTCCCTAAGCCCTTGTGTGATTTCTCGGGTTCATTTCAGTAGAAAATGGGA
CTGGTTGGCAGCAAGTTAAATTGGAGAAAAAAAATGTGCCGAGTTTTTCTTTTCCCTAAACCAT
GCTTTCTCCTTAAAATCAACTGAAAAAGTGAATAAAGGGTGGCCACCTGCATGTAAATCGGCAC
ACGTCATACACAGAGAATGTCACCACGCATTCACATCCTGATCTGGCACTACGCCTTTTCTGAC
TGTCGTGAACACCCCTTAACACAGGGAGGCAGGACACAGAGCTCAGAGCTGAATAAAAAGGTTG
GGTAACCCAATACCCCAGCCCAAGTTCAGCATTCCATCTACAAACACCCCATTTACAGAGCATG
GCAACAGGAGGCAGAGCCAAGCCCCATCACCTCTCTTCACTCACAAGCAAAAGGCACTTCAAAG
TGGAGGCCCCCTGAGGACACGAGAAATAAAAAGGTCCGCCTGGCTTTCAAGTCTCTCCAACAAT
GCAGAGTTGGGTTTTCAATGGTGAAAGAGAAATCCATGCCCCATTTATCAAGGGTTGAACTTTG
TATGGGGCAAGCGTTTGTGTTGCTTCCTTACAGAGAAAGACAAAGGGAAAGTGAGTTTTCAGTT
TTCAAATCTCAGATTCTTGTCCCGGCTGCTCGGGCAAGAGCCCAATGATTGTTGGATAAATTCT
TTTTCCTGATTGGTTTATTGCTTAAAACGGATTTTTTTTAAACCAACTACAAACAGACTGTAAA
GTAAAAAAGATCACAGAATGTATGCTCCTACCGTTACTATCCCCTCCTCACCAAAAAGCCAGGA
AGCACTCCAGATGCCTAAGAGCTGAGAGCTCTGCTTCATAGGGAGGGTTGTGGTCTTTAACAAC
ATTCCCAAAGCCAGTCCCCACCTCCACGGTGTTCCCCCTCCCTGAGAGGTGCAGGTCCCAGCCG
CTGCTGGTTCTTGCTGCCTTTGTTGAGGAGTGTGTGGCTATGTGGCCATATGTTGTCCTGGAAT
CATTCACATCATTGTAAAACTGCTTCCTACAGGATAGATTCAGATCATTTCTAATTTCTCTCTT
GCACATCAGTGTGCGCAAGTGTACTAGATCTGCTGGCACACAAATATCAATGCCGCCATCACCT
TATTGGCCCACCCAGTCACATTTGGAATCCCAAAGCACAGAGTATCAAATTTGACAGTCAAGAA
AGAGAAAACTCGTGCACACCAACCAAAGTGAACATCTATGAAAAAAAAGGGGGTTAGTTTTATT
CTGTGCACATATACACACAAACATTCACATTTAAACACTCCAACCCCACAGAATATTGGAAATG
GCAGCTGTATCCCTAATGCTTTCAGAGAAGCAAAAGTATGCAACAAGAGGCAGGGGAGACAAAT
TTTAGATTGCTGTCTCCTTGTTTCTCTGGAGCAGGGTACAAAATAATATCAAAAGTTCAAGCCA
AAATTTTACCACTCCTAAAATAAAGGAATTGGGCCCAAATTTGCTCACAGAAAACCAAGCCAGT
CTTGCTTGCTGTCACCTCTCCTATAGCCTCAGGAAACCCTGAAACAGGAGAGAAACTTGGTTCA
GATTGAGGATTCTAAAGCAGAAACTCGTAGATTTGCATTTGAGAGTGTCCATGACACATCCACC
TGCCCTCTGGACCCAGTCAGTTCCTAGTGGGATTGTTGGTGTTGTTCAAGTTCTCAGGACCGAA
ACATGCCAGACAGAGTCAGCAGGGCAGAGAACATGTGCAGGCGCTCGGGGATGGGGCTGTTCCT
CAGCTCAGCAGATGATGCAGAATGTCTGAAGCCTCACTTTAGTGTCATGAAAAGAGGCAAGGAC
CGTCTCATGATCAAGGAAACCGCTTTGCAGGGCCTCTGACAGAGGCCATTGGAATTTATTTTGT
AGGGAAGACATGAGTCAGGTGGCTTGGAGGCCTTTCAGCAAAACACAGCTGTCTCCATGACAAG
ATTTTTGGTAACCTTAACATACATCTGCTCCTGGCCAGAGAGAGTTGATCCACTTCCCTTCACC
ACCACTTCCCACATCTTTTAAATGCCTCTGTGACTTGAGATGAAGTGAGATGTGGCCTGTAAAA
GAAGGTTGTCCACACCCAGTCCACCTTAACAGAAAGATGATCACAAAAGAGACAACTATCAGAG
CTGCTGGCCAGTCAGGGGGGACGATGGAACTTGAAGTGTTCTCTTGAGAGAATTGCACTGAAGA
TTTGATAGGGTTTGATGCCTGCCTGAATGAAGCCTGTCAGAGAATTTCAGTGAGCTTTCATACA
AGCACACACACACACACACACACACACACACACACCACACACACACACATACACACACACACAC
ACACACACACACCACACACACACACATACACACACACACACACACACACACACACCACACACAC
ACACATACACACACACACACACACACACACACACACACACACCTCTGCATGGACAGGCATACGC
ACAAATTATATCCTTCCTTGCACCCAGAAAGATTGGGGCTCCATCAAGTAGCATGTTAGAGACA
GCAGGTCTGTCGCAGGAAAAGCATGCTATAGAAACTTTCAATTAGCAGACAAGGCCTTCCCATT
AAGAGGGAGTTGGAAGAAAAATATAAAAATCAAAGGGGGGAGGGAGGAGAGAAAATAACTTATT
AGTAATGGGATTCCTAAGAAAGCAACCAAAATATATCATGATGTTTTAAAGTGGTTACAAATAG
CAGACATTTTTAAACAATTACTGGAGTCTATACATAGCCTACATTTGAAAAGCACGTGTCAAGA
AGGACTCAGGAAAGAAAGGTACCTGTGCCTTGCCCCAGTGTCTGTCTGAGCTTAGTTTACTGCC
TTTGGATCTTTGTGGTCCTTTTTAATCTCACAGCTTTGTATTCCTTGACATGTATAAGCTAAGA
AAAGCAATAAAGGAAATACAGCCAGCTCAGATCCAATACCGATTATTGTACCTTCCAGCTATTT
CCCTCACGTCACTGGGCACTTTAGGTCCACAGAGGCTATGGTGCCACAGCAAGGGGACATTGGC
TTCTGTGCAGTCACAGATGTGCTCATGTTCGCTACATCTGGAAGTAGCTTGCTTCCCACATAGA
CCGCCTAGACAGCATGCATCCACATGCCTTTCTCACACGTAGACAATCAACCTCGCTTTAAACT
ACCTAAACGGCACCAAAGTCTTTAATCTTGCTCATGAGTCTGTTCTTAGGAAAGGGTGGGAGAG
AGGGCCACACAGACAAATGCATGACCTGGCCAGGCTTTGAGAGACCAACCTAGTCCTGAAAGTC
TAAGCACCCAGACTCGAATTATTGTACAGAGAGGGGGACTGAATGGAGAAGTATGGTGCTTAAG
CCAAAGCACTTTTCCTAAATGACCGATGGGCTGACTGGAAAATTAGTAAATACCTAAGGGTGAA
GGAATGCCGTGGACTTGCATGGACTCCCACCAGAGACTGATTCCACTGGGGGAATCTGTCTGCT
GGTTACCATAGTACAAAGGACCACAGATAGTAAGTCATCTTGGAATATCAGCAAAGAGTTCCTA
GTGTTACCAAGGTCAATGTTTAACACTGACAGAAGAGTCCCCATCCAGCTTAACCCCCCAAGAC
CCTACAGCTGATGACTTCACCCTTTTTTTGTTTGGTTGATTTGGTTTGGTTTGGTTTCGAACAC
TTTTTGATCTTACGCATGACAAGGTTGAAAGTTGCCACTCTGGGACCCTACACCTATTTTCTTC
AGAAGCATCCCTGAAGTTTTTGTTTGTTTAGGTGTTTTCTTCAGCTTTCTCCTCTTCCTCCTCC
TCCTCGTTTTTCTCCTCTTCCTTTTCTTCCTTCTGATGCCATTATTCCCACACAGTGTAAAGAT
TCAAAAGTTCTAGACCTTTACCCCCAACAGCACTTTTCTGTGCATGACTAATCCCCAGAGGAGT
CCTTTCTAGTTGCTACTGAATGGCAGGCAGAATCCATAACCACAGAGGTACATACCTTCCAAGG
ACCAGTAGACTTGAAGGCGGTACCAATGGGAGTTGGTTGTCTGGTGTCAAGATGAGCACTGGAC
ACAGTGTTATCATAGAGTTATGGTTAGGTCAAGGTTGTAGCCTTTTTTGTATCCTGCATCTTCG
TTCCACATAGTCAAAAAGGAAACAGGAAAGGAGCCACATTGAATCATTCCAAGACTCTGGGTTT
GTGCTTGCCTGCATTGATTATTGGGAGGAAGTCATTTCAAATGGGAGGTCAGAGAAAGGCTTGG
GCTCCTCTTGCTATGAGTCCCACAGTGCGATTACTTTCGTATGCAGTAGGTTGATAGAAACAGT
GAGGTCACTTCCTGACCTGGGAATCTGGTCACCAAAAGATGGGGATTTTCCCTTCGGTTGCAGT
TTCTTCATAATAGATATGTAAATAACGGAGCCTTGGACACTGACGGGTCTCTAGAACTCTCTGC
TAGCCAAAAAGATACTAATTTTCTCAAATCAAGTTACATACACACAAACAAGAAAAAAGCAAAA
TGTCAGAATCCCAGAATAAAATCATTTCCAGAATGAAACTGCATGTGTGAATTAAGGGCAGAGA
ATTCCTCGCCAGTTAACCCAATGACTCTCCGATTCTTACCATCAGGATAAAACTGAAGGACAAA
GGATGCCTTTTGGGTTTTTTAATTTTTTTAATATTGCACTTTATAGTATTTCATAAGAGACGAT
TGTCTTAATTAAAGCCATAAAATACCAATAATGCATATATTCAGGGCTTCTGGATATAGTCAAT
AAACAGTCCACGGGTCATTCTGTGTGTTGTTCGTTGTAAAATGAAGTTTATCTGTTCTGTTTTT
TATTACTTAAACTACTGTTCTAGACAATCCTAAAAAATTGTAGGTGTGTATTTTAAGCAAACTT
TGAAAATCAAAGAAATTATTCCTTTCATGGAAGAATTCTTCATTTTCAAAGCAACTCATTGCAT
GGTTTCTTTAAGTAGCAAGTTCCACTATTGCACTGAAAATATTTCCTTTTACAGACCCTAAGAT
TATTTTTCAGGAATCCATTTGCTATGTTAAGCAAGATTCGCCCACGTGGAGATTGAAATAGATG
ATTAGCAAACATGCCTGGAAAAATTAGGATGTGCTTATGTTCTTA

hide sequence

RefSeq Acc Id:

XM_063288501 ⟹ XP_063144571

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	106,543,869 - 106,787,809 (-)	NCBI

RefSeq Acc Id:

XM_063288502 ⟹ XP_063144572

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	106,543,869 - 106,787,403 (-)	NCBI

RefSeq Acc Id:

XM_063288503 ⟹ XP_063144573

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	106,543,869 - 106,787,426 (-)	NCBI

RefSeq Acc Id:

XM_063288504 ⟹ XP_063144574

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	106,543,869 - 106,787,040 (-)	NCBI

RefSeq Acc Id:

XM_063288505 ⟹ XP_063144575

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	106,543,869 - 106,787,810 (-)	NCBI

RefSeq Acc Id:

XM_063288506 ⟹ XP_063144576

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	106,543,869 - 106,787,810 (-)	NCBI

RefSeq Acc Id:

XM_063288507 ⟹ XP_063144577

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	106,543,869 - 106,787,809 (-)	NCBI

RefSeq Acc Id:

XM_063288508 ⟹ XP_063144578

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	106,543,869 - 106,787,809 (-)	NCBI

RefSeq Acc Id:

XM_063288509 ⟹ XP_063144579

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	106,543,869 - 106,787,426 (-)	NCBI

RefSeq Acc Id:

XM_063288510 ⟹ XP_063144580

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	106,543,869 - 106,650,382 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_113931	(Get FASTA)	NCBI Sequence Viewer
	XP_063144571	(Get FASTA)	NCBI Sequence Viewer
	XP_063144572	(Get FASTA)	NCBI Sequence Viewer
	XP_063144573	(Get FASTA)	NCBI Sequence Viewer
	XP_063144574	(Get FASTA)	NCBI Sequence Viewer
	XP_063144575	(Get FASTA)	NCBI Sequence Viewer
	XP_063144576	(Get FASTA)	NCBI Sequence Viewer
	XP_063144577	(Get FASTA)	NCBI Sequence Viewer
	XP_063144578	(Get FASTA)	NCBI Sequence Viewer
	XP_063144579	(Get FASTA)	NCBI Sequence Viewer
	XP_063144580	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAC19404	(Get FASTA)	NCBI Sequence Viewer
	AAC19405	(Get FASTA)	NCBI Sequence Viewer
	EDL76005	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000010827
	ENSRNOP00000010827.6
	ENSRNOP00000074180
	ENSRNOP00000074180.2
GenBank Protein	O54701	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_113931 ⟸ NM_031743

- UniProtKB:

O54706 (UniProtKB/Swiss-Prot), O54701 (UniProtKB/Swiss-Prot), A6KRB1 (UniProtKB/TrEMBL), A0A8I6GKF7 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MDLHQSATVRLLQEWCSHESPSGCRRHYNTRKKLKLIRVIGLVMGLVAVSTVPFSISAFTETYS
QNNRGEASDVTGPRAAPGHRQRTLLDLNDKIRDYTPQPPASQEDRSENGTDHAQGDYPKDVFSL
EERRKGAIILHVIGMIYMFIALAIVCDEFFVPSLTVITEKLGISDDVAGATFMAAGGSAPELFT
SLIGVFIAHSNVGIGTIVGSAVFNILFVIGMCALFSREILNLTWWPLFRDVSFYIVDLIMLIIF
FLDNVIMWWESLLLLTAYFAYVVFMKFNVQVERWVKQMINRNKVVKVTVSEAQAKASTAGDKEE
PTLPNKPRLQRGGSSASLHNSLMRNSIFQLMIHTLDPLAEELGSYGKLKYYDTMTEEGRFREKA
SILHKIAKKKCQVDENERQNGAANHVDYAAEKIELPNSTSTEVEMTPSSEASEPVQNGNLSHSI
EAADAPQATETAEEDDDQPLSLSWPSNTRKQITFLIVLPIVFPLWITLPDVRKPASKKFFPITF
FGSITWIAVFSYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSS
SVGSNIFDITVGLPLPWLLYTIIHRFKPVTVSSNGLFCAIVLLFIMLIFVILSIALCKWRMNKI
LGFIMFGLYFAFLVVSVLLEDKVLECPVSI

hide sequence

Ensembl Acc Id:

ENSRNOP00000074180 ⟸ ENSRNOT00000083373

Ensembl Acc Id:

ENSRNOP00000010827 ⟸ ENSRNOT00000010827

Ensembl Acc Id:

ENSRNOP00000092960 ⟸ ENSRNOT00000114418

RefSeq Acc Id:	XP_063144576 ⟸ XM_063288506
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6GKF7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063144575 ⟸ XM_063288505
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6GKF7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063144578 ⟸ XM_063288508
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6GKF7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063144577 ⟸ XM_063288507
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6GKF7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063144571 ⟸ XM_063288501
- Peptide Label:	isoform X1
- UniProtKB:	O54706 (UniProtKB/Swiss-Prot), O54701 (UniProtKB/Swiss-Prot), A0A8I6GKF7 (UniProtKB/TrEMBL), A6KRB1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063144579 ⟸ XM_063288509
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6GKF7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063144573 ⟸ XM_063288503
- Peptide Label:	isoform X1
- UniProtKB:	O54706 (UniProtKB/Swiss-Prot), O54701 (UniProtKB/Swiss-Prot), A0A8I6GKF7 (UniProtKB/TrEMBL), A6KRB1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063144572 ⟸ XM_063288502
- Peptide Label:	isoform X1
- UniProtKB:	O54706 (UniProtKB/Swiss-Prot), O54701 (UniProtKB/Swiss-Prot), A0A8I6GKF7 (UniProtKB/TrEMBL), A6KRB1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063144574 ⟸ XM_063288504
- Peptide Label:	isoform X1
- UniProtKB:	O54706 (UniProtKB/Swiss-Prot), O54701 (UniProtKB/Swiss-Prot), A0A8I6GKF7 (UniProtKB/TrEMBL), A6KRB1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063144580 ⟸ XM_063288510
- Peptide Label:	isoform X4

Protein Domains

Sodium/calcium exchanger membrane region

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-O54701-F1-model_v2	AlphaFold	O54701	1-670	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13693831

Promoter ID:

EPDNEW_R4352

Type:

single initiation site

Name:

Slc24a2_1

Description:

solute carrier family 24 member 2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	5	105,582,428 - 105,582,488	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:628650	AgrOrtholog
BioCyc Gene	G2FUF-40835	BioCyc
Ensembl Genes	ENSRNOG00000008169	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000010827	ENTREZGENE
	ENSRNOT00000010827.7	UniProtKB/Swiss-Prot
	ENSRNOT00000083373	ENTREZGENE
	ENSRNOT00000083373.2	UniProtKB/Swiss-Prot
Gene3D-CATH	1.20.1420.30	UniProtKB/Swiss-Prot
InterPro	K/Na/Ca-exchanger	UniProtKB/Swiss-Prot
	NaCa_Exmemb	UniProtKB/Swiss-Prot
	NCX_ion-bd_dom_sf	UniProtKB/Swiss-Prot
KEGG Report	rno:84550	UniProtKB/Swiss-Prot
NCBI Gene	84550	ENTREZGENE
PANTHER	PTHR10846	UniProtKB/Swiss-Prot
	PTHR10846:SF41	UniProtKB/Swiss-Prot
Pfam	Na_Ca_ex	UniProtKB/Swiss-Prot
PhenoGen	Slc24a2	PhenoGen
RatGTEx	ENSRNOG00000008169	RatGTEx
UniProt	A0A8I6GKF7	ENTREZGENE, UniProtKB/TrEMBL
	A6KRB1	ENTREZGENE, UniProtKB/TrEMBL
	NCKX2_RAT	UniProtKB/Swiss-Prot, ENTREZGENE
	O54706	ENTREZGENE
UniProt Secondary	O54706	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-03-09	Slc24a2	solute carrier family 24 member 2	Slc24a2	solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2004-02-26	Slc24a2	solute carrier family 24 (sodium/potassium/calcium exchanger), member 2			Symbol and Name status set to approved	625702	APPROVED
2003-02-27	Slc24a2	solute carrier family 24 (sodium/potassium/calcium exchanger), member 2			Symbol and Name status set to provisional	70820	PROVISIONAL

RGD Curation Notes

Note Type	Note	Reference
gene_expression	expressed in the brain	625729
gene_process	mediates K+-dependent Ca2+ clearance; may mediate 90% of Na+/Ca2+ exchanger activity in axon terminals of neurohypophysis	625729

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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RGD Manual Annotations