Mfap3l (microfibril associated protein 3 like) - Rat Genome Database

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Gene: Mfap3l (microfibril associated protein 3 like) Rattus norvegicus
Analyze
Symbol: Mfap3l
Name: microfibril associated protein 3 like
RGD ID: 1311274
Description: Predicted to be located in several cellular components, including cell junction; nucleoplasm; and plasma membrane. Orthologous to human MFAP3L (microfibril associated protein 3 like); INTERACTS WITH 17alpha-ethynylestradiol; 2,5-hexanedione; 3,7-dihydropurine-6-thione.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC306424; microfibrillar-associated protein 3-like
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81634,422,490 - 34,465,544 (-)NCBIGRCr8
mRatBN7.21629,411,643 - 29,454,665 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1629,415,849 - 29,430,863 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1633,010,729 - 33,025,743 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01636,444,460 - 36,459,478 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01632,645,272 - 32,660,305 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01632,734,059 - 32,777,091 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1632,738,265 - 32,753,278 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01632,571,990 - 32,587,004 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41632,751,464 - 32,766,478 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11632,751,539 - 32,766,553 (-)NCBI
Celera1629,409,761 - 29,424,775 (-)NCBICelera
Cytogenetic Map16p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,1-dichloroethene  (ISO)
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,2',5,5'-tetrachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
2,5-hexanedione  (EXP)
2-amino-2-deoxy-D-glucopyranose  (ISO)
2-hydroxypropanoic acid  (ISO)
3,7-dihydropurine-6-thione  (EXP)
3-methylcholanthrene  (ISO)
4-hydroxyphenyl retinamide  (ISO)
6-propyl-2-thiouracil  (EXP)
acetamide  (EXP)
acrylamide  (ISO)
aldehydo-D-glucosamine  (ISO)
all-trans-retinoic acid  (ISO)
alpha-Zearalanol  (EXP)
avobenzone  (ISO)
benzo[a]pyrene  (ISO)
beta-D-glucosamine  (ISO)
bisphenol A  (EXP,ISO)
carbendazim  (EXP)
chlordecone  (ISO)
Cuprizon  (EXP)
cyclosporin A  (ISO)
DDT  (EXP)
dexamethasone  (ISO)
dibutyl phthalate  (ISO)
dioxygen  (ISO)
dorsomorphin  (ISO)
entinostat  (ISO)
ethanol  (ISO)
fenvalerate  (EXP)
FR900359  (ISO)
gentamycin  (EXP)
isotretinoin  (ISO)
lipopolysaccharide  (ISO)
mercaptopurine  (EXP)
mercury dibromide  (ISO)
methylmercury chloride  (ISO)
nickel atom  (ISO)
p-chloromercuribenzoic acid  (ISO)
panobinostat  (ISO)
paracetamol  (EXP)
paraquat  (EXP)
PCB138  (ISO)
perfluorooctanoic acid  (EXP)
phenylmercury acetate  (ISO)
potassium chromate  (ISO)
potassium dichromate  (ISO)
purine-6-thiol  (EXP)
rac-lactic acid  (ISO)
SB 431542  (ISO)
succimer  (ISO)
sunitinib  (ISO)
thioacetamide  (EXP)
trichloroethene  (EXP)
trichostatin A  (ISO)
valproic acid  (EXP,ISO)
vinclozolin  (EXP)
vorinostat  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cell junction  (IEA,ISO)
cytoplasm  (ISO,ISS)
nucleoplasm  (IEA,ISO)
nucleus  (ISO,ISS)
plasma membrane  (ISO,ISS)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. GOA pipeline RGD automated data pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:15489334   PMID:24735981  


Genomics

Comparative Map Data
Mfap3l
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81634,422,490 - 34,465,544 (-)NCBIGRCr8
mRatBN7.21629,411,643 - 29,454,665 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1629,415,849 - 29,430,863 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1633,010,729 - 33,025,743 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01636,444,460 - 36,459,478 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01632,645,272 - 32,660,305 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01632,734,059 - 32,777,091 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1632,738,265 - 32,753,278 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01632,571,990 - 32,587,004 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41632,751,464 - 32,766,478 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11632,751,539 - 32,766,553 (-)NCBI
Celera1629,409,761 - 29,424,775 (-)NCBICelera
Cytogenetic Map16p12NCBI
MFAP3L
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384169,986,602 - 170,027,277 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl4169,986,597 - 170,033,031 (-)EnsemblGRCh38hg38GRCh38
GRCh374170,907,753 - 170,947,546 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 364171,144,323 - 171,184,004 (-)NCBINCBI36Build 36hg18NCBI36
Build 344171,287,254 - 171,301,869NCBI
Celera4168,240,037 - 168,279,718 (-)NCBICelera
Cytogenetic Map4q33NCBI
HuRef4166,662,586 - 166,702,266 (-)NCBIHuRef
CHM1_14170,884,199 - 170,923,880 (-)NCBICHM1_1
T2T-CHM13v2.04173,346,787 - 173,390,228 (-)NCBIT2T-CHM13v2.0
Mfap3l
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39861,085,859 - 61,129,765 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl861,085,861 - 61,129,763 (+)EnsemblGRCm39 Ensembl
GRCm38860,632,825 - 60,676,731 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl860,632,827 - 60,676,729 (+)EnsemblGRCm38mm10GRCm38
MGSCv37863,111,657 - 63,155,528 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36863,525,021 - 63,564,891 (+)NCBIMGSCv36mm8
Celera863,211,655 - 63,257,450 (+)NCBICelera
Cytogenetic Map8B3.1NCBI
cM Map830.86NCBI
Mfap3l
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540336,401,565 - 36,439,768 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540336,402,339 - 36,439,768 (+)NCBIChiLan1.0ChiLan1.0
MFAP3L
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v23167,768,687 - 167,809,601 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan14168,124,561 - 168,166,016 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v04162,211,860 - 162,253,294 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.14174,282,190 - 174,322,706 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4174,282,190 - 174,302,529 (-)Ensemblpanpan1.1panPan2
MFAP3L
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12520,844,840 - 20,863,317 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2520,805,369 - 20,862,285 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2521,477,304 - 21,515,302 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02521,020,957 - 21,058,966 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2520,981,462 - 21,058,969 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12520,904,804 - 20,942,785 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02520,841,236 - 20,879,238 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02520,938,849 - 20,976,844 (-)NCBIUU_Cfam_GSD_1.0
Mfap3l
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494321,556,109 - 21,594,453 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365161,971,904 - 2,008,817 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365161,971,114 - 2,008,734 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MFAP3L
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1419,825,244 - 19,856,897 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11419,825,135 - 19,864,254 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21421,124,159 - 21,184,964 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MFAP3L
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.17116,193,751 - 116,239,954 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl7116,193,729 - 116,233,704 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603796,133,843 - 96,173,936 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mfap3l
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247691,500,301 - 1,543,484 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247691,496,615 - 1,543,489 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Mfap3l
139 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:168
Count of miRNA genes:131
Interacting mature miRNAs:139
Transcripts:ENSRNOT00000015759
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2307172Activ4Activity QTL 43.710.00023locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)16133418960Rat
2312660Bw95Body weight QTL 950.05inguinal fat pad mass (VT:0010424)inguinal fat pad weight to body weight ratio (CMO:0001253)1683223659492508Rat
2312663Slep9Serum leptin concentration QTL 90.001blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)1683223659492508Rat
2312666Insul16Insulin level QTL 160.01blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1683223659492508Rat
2312669Stl23Serum triglyceride level QTL 230.01blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)1683223659492508Rat
737819Hcas4Hepatocarcinoma susceptibility QTL 44.43liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)16422760946975965Rat
737826Alc11Alcohol consumption QTL 113.2consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16422760960252231Rat
631561Hcuc2Hepatic copper content QTL 22.8liver copper amount (VT:0003065)liver total copper weight (CMO:0001507)16139533949Rat
6903294Stl30Serum triglyceride level QTL 302.60.0013blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)162515279370152793Rat
6903319Bw114Body weight QTL 1142.70.0037body mass (VT:0001259)body weight (CMO:0000012)16143534949Rat
9590151Scort8Serum corticosterone level QTL 88.450.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)16130836262Rat
7411664Foco30Food consumption QTL 30110.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)16144588133Rat
8694453Bw172Body weight QTL 1728.330.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)162432551369325513Rat
1354584Despr6Despair related QTL 63.10.0067locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16139533930Rat
1354625Despr7Despair related QTL 73.160.016locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16144977551Rat
1600378Arunc4Aerobic running capacity QTL 40.03exercise endurance trait (VT:0002332)maximum distance run on treadmill (CMO:0001406)1638024580345693Rat
61338Bp23Blood pressure QTL 234.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16422760949227609Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor depth of invasion (CMO:0001888)161769679182635055Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor diameter (CMO:0001889)161769679182635055Rat
70215Niddm29Non-insulin dependent diabetes mellitus QTL 293.54blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)161900443575226532Rat
2293343Glom16Glomerulus QTL 167.4kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)1683223646053497Rat
2302057Pia29Pristane induced arthritis QTL 293.60.001blood autoantibody amount (VT:0003725)serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002111)162173597566735975Rat
2302380Slep6Serum leptin concentration QTL 63.36blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)16132139025Rat
2306902Bp339Blood pressure QTL 3390.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16338015043025077Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor depth of invasion (CMO:0001888)161769679182635055Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor diameter (CMO:0001889)161769679182635055Rat
61405Niddm6Non-insulin dependent diabetes mellitus QTL 63.660.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)16422760948972724Rat
2303566Bw90Body weight QTL 902body mass (VT:0001259)body weight (CMO:0000012)16139533930Rat
70183BpQTLcluster13Blood pressure QTL cluster 133.654arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)16422760943025077Rat
70183BpQTLcluster13Blood pressure QTL cluster 133.654arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16422760943025077Rat
70183BpQTLcluster13Blood pressure QTL cluster 133.654arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)16422760943025077Rat

Markers in Region
BF404052  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21629,430,455 - 29,430,651 (+)MAPPERmRatBN7.2
Rnor_6.01632,752,871 - 32,753,066NCBIRnor6.0
Rnor_5.01632,586,597 - 32,586,792UniSTSRnor5.0
RGSC_v3.41632,766,071 - 32,766,266UniSTSRGSC3.4
Celera1629,424,368 - 29,424,563UniSTS
Cytogenetic Map16p12UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 1 2 1 42 29 19 11
Low 2 41 56 41 18 41 8 11 32 6 22 8
Below cutoff 1

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000015759   ⟹   ENSRNOP00000015759
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1629,415,849 - 29,430,863 (-)Ensembl
Rnor_6.0 Ensembl1632,738,265 - 32,753,278 (-)Ensembl
RefSeq Acc Id: NM_001012049   ⟹   NP_001012049
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81634,426,695 - 34,441,709 (-)NCBI
mRatBN7.21629,415,848 - 29,430,863 (-)NCBI
Rnor_6.01632,738,264 - 32,753,278 (-)NCBI
Rnor_5.01632,571,990 - 32,587,004 (-)NCBI
RGSC_v3.41632,751,464 - 32,766,478 (-)RGD
Celera1629,409,761 - 29,424,775 (-)RGD
Sequence:
RefSeq Acc Id: XM_017600107   ⟹   XP_017455596
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81634,422,490 - 34,465,544 (-)NCBI
mRatBN7.21629,411,643 - 29,454,665 (-)NCBI
Rnor_6.01632,734,059 - 32,777,091 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039094498   ⟹   XP_038950426
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81634,422,490 - 34,440,554 (-)NCBI
mRatBN7.21629,411,643 - 29,417,922 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: NP_001012049   ⟸   NM_001012049
- Peptide Label: precursor
- UniProtKB: Q6AYP2 (UniProtKB/Swiss-Prot),   A6KIT3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017455596   ⟸   XM_017600107
- Peptide Label: isoform X1
- UniProtKB: Q6AYP2 (UniProtKB/Swiss-Prot),   A6KIT3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000015759   ⟸   ENSRNOT00000015759
RefSeq Acc Id: XP_038950426   ⟸   XM_039094498
- Peptide Label: isoform X2
- UniProtKB: A6KIT4 (UniProtKB/TrEMBL)
Protein Domains
Ig-like   Ig-like C2-type   Immunoglobulin I-set

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6AYP2-F1-model_v2 AlphaFold Q6AYP2 1-409 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13700073
Promoter ID:EPDNEW_R10596
Type:initiation region
Name:Mfap3l_1
Description:microfibril associated protein 3 like
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01632,753,236 - 32,753,296EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1311274 AgrOrtholog
BioCyc Gene G2FUF-11570 BioCyc
Ensembl Genes ENSRNOG00000011775 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
  ENSRNOG00055012244 UniProtKB/Swiss-Prot
  ENSRNOG00060007004 UniProtKB/Swiss-Prot
  ENSRNOG00065004421 UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000015759 ENTREZGENE
  ENSRNOT00000015759.5 UniProtKB/Swiss-Prot
  ENSRNOT00055020828 UniProtKB/Swiss-Prot
  ENSRNOT00060011494 UniProtKB/Swiss-Prot
  ENSRNOT00065006429 UniProtKB/Swiss-Prot
Gene3D-CATH 2.60.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7111774 IMAGE-MGC_LOAD
InterPro Ig-like_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_I-set UniProtKB/TrEMBL
  Ig_sub UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_sub2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:306424 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGC_CLONE MGC:93849 IMAGE-MGC_LOAD
NCBI Gene 306424 ENTREZGENE
PANTHER MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3 UniProtKB/TrEMBL
  MICROFIBRILLAR-ASSOCIATED PROTEIN 3-LIKE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR14340 UniProtKB/Swiss-Prot
Pfam I-set UniProtKB/TrEMBL
  Ig_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Mfap3l PhenoGen
PROSITE IG_LIKE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx ENSRNOG00000011775 RatGTEx
  ENSRNOG00055012244 RatGTEx
  ENSRNOG00060007004 RatGTEx
  ENSRNOG00065004421 RatGTEx
SMART IGc2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00409 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Immunoglobulin UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
UniProt A6KIT3 ENTREZGENE, UniProtKB/TrEMBL
  A6KIT4 ENTREZGENE, UniProtKB/TrEMBL
  MFA3L_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-06-13 Mfap3l  microfibril associated protein 3 like  Mfap3l  microfibrillar-associated protein 3-like  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-12-06 Mfap3l  microfibrillar-associated protein 3-like  Mfap3l_predicted  microfibrillar-associated protein 3-like (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Mfap3l_predicted  microfibrillar-associated protein 3-like (predicted)      Symbol and Name status set to approved 70820 APPROVED