Shkbp1 (Sh3kbp1 binding protein 1) - Rat Genome Database

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Gene: Shkbp1 (Sh3kbp1 binding protein 1) Rattus norvegicus
Analyze
Symbol: Shkbp1
Name: Sh3kbp1 binding protein 1
RGD ID: 1309281
Description: Predicted to enable identical protein binding activity. Predicted to be involved in positive regulation of epidermal growth factor receptor signaling pathway. Predicted to be located in lysosome. Orthologous to human SHKBP1 (SH3KBP1 binding protein 1); INTERACTS WITH 17beta-estradiol; 2,4-dinitrotoluene; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC292735; RGD1309281; Sb1; SETA-binding protein 1; SH3KBP1-binding protein 1; similar to SETA binding protein 1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8191,764,426 - 91,777,959 (-)NCBIGRCr8
mRatBN7.2182,636,797 - 82,650,330 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl182,636,797 - 82,650,375 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx188,039,474 - 88,052,984 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0196,526,308 - 96,539,792 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0189,795,329 - 89,808,840 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0184,154,703 - 84,168,074 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl184,154,703 - 84,168,074 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0185,365,817 - 85,379,188 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4182,422,792 - 82,436,208 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1182,500,913 - 82,514,376 (-)NCBI
Celera177,048,385 - 77,061,819 (-)NCBICelera
Cytogenetic Map1q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
lysosome  (IEA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:11152963   PMID:15057822   PMID:21830225  


Genomics

Comparative Map Data
Shkbp1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8191,764,426 - 91,777,959 (-)NCBIGRCr8
mRatBN7.2182,636,797 - 82,650,330 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl182,636,797 - 82,650,375 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx188,039,474 - 88,052,984 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0196,526,308 - 96,539,792 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0189,795,329 - 89,808,840 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0184,154,703 - 84,168,074 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl184,154,703 - 84,168,074 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0185,365,817 - 85,379,188 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4182,422,792 - 82,436,208 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1182,500,913 - 82,514,376 (-)NCBI
Celera177,048,385 - 77,061,819 (-)NCBICelera
Cytogenetic Map1q21NCBI
SHKBP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381940,576,873 - 40,591,397 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1940,576,853 - 40,591,399 (+)EnsemblGRCh38hg38GRCh38
GRCh371941,082,779 - 41,097,303 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361945,774,630 - 45,789,141 (+)NCBINCBI36Build 36hg18NCBI36
Build 341945,774,629 - 45,789,141NCBI
Celera1937,881,810 - 37,896,356 (+)NCBICelera
Cytogenetic Map19q13.2NCBI
HuRef1937,517,305 - 37,531,390 (+)NCBIHuRef
CHM1_11941,082,689 - 41,097,190 (+)NCBICHM1_1
T2T-CHM13v2.01943,397,488 - 43,411,988 (+)NCBIT2T-CHM13v2.0
Shkbp1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39727,041,553 - 27,055,440 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl727,041,558 - 27,055,444 (-)EnsemblGRCm39 Ensembl
GRCm38727,342,128 - 27,356,015 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl727,342,133 - 27,356,019 (-)EnsemblGRCm38mm10GRCm38
MGSCv37728,127,152 - 28,141,027 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36727,050,897 - 27,064,779 (-)NCBIMGSCv36mm8
Celera721,921,926 - 21,935,907 (-)NCBICelera
Cytogenetic Map7A3NCBI
cM Map715.88NCBI
Shkbp1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955578716,632 - 730,593 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955578716,818 - 730,593 (-)NCBIChiLan1.0ChiLan1.0
SHKBP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22046,836,135 - 46,850,721 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11948,707,060 - 48,721,631 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01937,621,867 - 37,636,431 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11946,128,717 - 46,143,423 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1946,128,717 - 46,143,423 (+)Ensemblpanpan1.1panPan2
SHKBP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11113,154,285 - 113,165,988 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1113,154,460 - 113,165,992 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1112,556,527 - 112,568,204 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01113,752,860 - 113,764,552 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1113,752,862 - 113,764,574 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11113,312,464 - 113,324,148 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01112,944,344 - 112,956,029 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01113,938,677 - 113,950,366 (-)NCBIUU_Cfam_GSD_1.0
Shkbp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934914,475,905 - 14,487,839 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366612,903,938 - 2,915,910 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366612,903,986 - 2,915,908 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SHKBP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl648,813,168 - 48,826,457 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1648,813,163 - 48,826,461 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
SHKBP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1635,036,834 - 35,050,953 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366607313,160,024 - 13,173,997 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Shkbp1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624925529,182 - 542,436 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624925529,333 - 542,230 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Shkbp1
104 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:109
Count of miRNA genes:92
Interacting mature miRNAs:100
Transcripts:ENSRNOT00000028348
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1554320Bmd1Bone mineral density QTL 112.20.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)150910886060548Rat
631688Hcas2Hepatocarcinoma susceptibility QTL 230.0001liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)15925874115540829Rat
631495Bp96Blood pressure QTL 964.52arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)122340647102268831Rat
1358359Sradr1Stress Responsive Adrenal Weight QTL 14.74adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)130882023123479925Rat
70225Bp58Blood pressure QTL 583.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)132356093162846471Rat
1300172Bp172Blood pressure QTL 1723.56arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)13273727390665040Rat
10059597Bp377Blood pressure QTL 3773.420.025arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)132737458199368955Rat
2313051Bss57Bone structure and strength QTL 573.70.0001tibia strength trait (VT:1000284)bone polar moment of inertia (CMO:0001558)143284731118944897Rat
2313059Bss55Bone structure and strength QTL 553.20.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)143284731118944897Rat
2313072Bss53Bone structure and strength QTL 534.30.0001tibia length (VT:0004357)tibia length (CMO:0000450)143284731118944897Rat
2313078Bss54Bone structure and strength QTL 543.50.0001tibia area (VT:1000281)tibia midshaft cross-sectional area (CMO:0001717)143284731118944897Rat
2313094Bss58Bone structure and strength QTL 583.70.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)143284731118944897Rat
2313098Bmd70Bone mineral density QTL 703.60.0001tibia mineral mass (VT:1000283)compact volumetric bone mineral density (CMO:0001730)143284731118944897Rat
2313099Bss56Bone structure and strength QTL 562.40.0001tibia size trait (VT:0100001)tibia midshaft endosteal cross-sectional area (CMO:0001716)143284731118944897Rat
2302059Pia36Pristane induced arthritis QTL 363.80.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)14333300288333002Rat
2313402Anxrr24Anxiety related response QTL 24aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)148963584144267916Rat
1578649Bmd8Bone mineral density QTL 84.9femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)14939317294393172Rat
1578654Bss10Bone structure and strength QTL 104femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)149393172159356837Rat
634314Niddm44Non-insulin dependent diabetes mellitus QTL 44blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)149393289199050459Rat
6903308Scl36Serum cholesterol QTL 3620.0125blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)15386304190532583Rat
61342Bp27Blood pressure QTL 273.40.0006arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)15673266898773277Rat
2300164Bmd44Bone mineral density QTL 445.40.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)156949932101949932Rat
2298545Neuinf8Neuroinflammation QTL 84.6nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)157336763151090257Rat
1300121Hrtrt1Heart rate QTL 13.7heart pumping trait (VT:2000009)heart rate (CMO:0000002)165789093115540829Rat
7421628Bp361Blood pressure QTL 3610.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)166023617118608521Rat
631512Scl6Serum cholesterol level QTL 69.6blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)17219768090508767Rat
1358192Ept13Estrogen-induced pituitary tumorigenesis QTL 133.4pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)177494165122494165Rat
10054135Gmadr2Adrenal mass QTL 21.970.0129adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)177857876122857876Rat
1549903Bp267Blood pressure QTL 267arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)177876254106047988Rat
61344Bp29Blood pressure QTL 297.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)178350581123350581Rat
7411712Strs4Sensitivity to stroke QTL 48.7cerebrum integrity trait (VT:0010549)percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)178430536123430536Rat
61433Cia2Collagen induced arthritis QTL 25joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)17843075491209302Rat
1582234Gluco18Glucose level QTL 183.40.0003blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)178479925123479925Rat
4889494Scort2Serum corticosterone level QTL 24.2blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)180592172125592172Rat
1578780Cm52Cardiac mass QTL 523.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)181591954219808434Rat
2313083Bmd74Bone mineral density QTL 7440.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)182174743118944897Rat

Markers in Region
RH134312  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2182,636,938 - 82,637,121 (+)MAPPERmRatBN7.2
Rnor_6.0184,154,845 - 84,155,027NCBIRnor6.0
Rnor_5.0185,365,959 - 85,366,141UniSTSRnor5.0
RGSC_v3.4182,422,938 - 82,423,120UniSTSRGSC3.4
Celera177,048,527 - 77,048,709UniSTS
RH 3.4 Map1828.2UniSTS
Cytogenetic Map1q21UniSTS
MARC_14429-14430:1010078261:1  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2182,650,780 - 82,651,235 (+)MAPPERmRatBN7.2
Rnor_6.0184,168,525 - 84,168,979NCBIRnor6.0
Rnor_5.0185,379,639 - 85,380,093UniSTSRnor5.0
RGSC_v3.4182,436,659 - 82,437,113UniSTSRGSC3.4
Celera177,062,270 - 77,062,724UniSTS
Cytogenetic Map1q21UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 2 18 16 10 12 10 53 20 29 3
Low 1 25 41 31 7 31 8 11 21 15 12 8 8
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000028348   ⟹   ENSRNOP00000028348
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl182,636,797 - 82,650,375 (-)Ensembl
Rnor_6.0 Ensembl184,154,703 - 84,168,074 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000084586   ⟹   ENSRNOP00000075019
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl182,636,802 - 82,650,122 (-)Ensembl
Rnor_6.0 Ensembl184,154,705 - 84,168,044 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000102147   ⟹   ENSRNOP00000087059
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl182,636,797 - 82,650,375 (-)Ensembl
RefSeq Acc Id: NM_001271080   ⟹   NP_001258009
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8191,764,426 - 91,777,959 (-)NCBI
mRatBN7.2182,636,797 - 82,650,330 (-)NCBI
Rnor_6.0184,154,703 - 84,168,074 (-)NCBI
Rnor_5.0185,365,817 - 85,379,188 (-)NCBI
Celera177,048,385 - 77,061,819 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001258009 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000028348
  ENSRNOP00000028348.4
  ENSRNOP00000075019.2
  ENSRNOP00000087059.1
GenBank Protein P0C5J9 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: NP_001258009   ⟸   NM_001271080
- UniProtKB: P0C5J9 (UniProtKB/Swiss-Prot),   A0A8I6GER6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000075019   ⟸   ENSRNOT00000084586
RefSeq Acc Id: ENSRNOP00000028348   ⟸   ENSRNOT00000028348
RefSeq Acc Id: ENSRNOP00000087059   ⟸   ENSRNOT00000102147
Protein Domains
BTB

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P0C5J9-F1-model_v2 AlphaFold P0C5J9 1-704 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13689849
Promoter ID:EPDNEW_R374
Type:multiple initiation site
Name:Shkbp1_1
Description:Sh3kbp1 binding protein 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0184,168,117 - 84,168,177EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1309281 AgrOrtholog
BioCyc Gene G2FUF-60312 BioCyc
Ensembl Genes ENSRNOG00000020882 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000028348 ENTREZGENE
  ENSRNOT00000028348.8 UniProtKB/Swiss-Prot
  ENSRNOT00000084586.2 UniProtKB/TrEMBL
  ENSRNOT00000102147.1 UniProtKB/TrEMBL
Gene3D-CATH 2.130.10.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro BTB/POZ_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SHKBP1/KCTD3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SHKBP1_KCTD3_BTB_POZ UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SKP1/BTB/POZ_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  T1-type_BTB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40/YVTN_repeat-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40_repeat_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:292735 UniProtKB/Swiss-Prot
NCBI Gene 292735 ENTREZGENE
PANTHER SETA BINDING PROTEIN 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3KBP1-BINDING PROTEIN 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam BTB_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Shkbp1 PhenoGen
PROSITE BTB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD_REPEATS_1 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000020882 RatGTEx
SMART BTB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF50978 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF54695 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0G2K9J5_RAT UniProtKB/TrEMBL
  A0A8I6GER6 ENTREZGENE, UniProtKB/TrEMBL
  P0C5J9 ENTREZGENE, UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-30 Shkbp1  Sh3kbp1 binding protein 1   Shkbp1_predicted  Sh3kbp1 binding protein 1 (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-30 Shkbp1_predicted  Sh3kbp1 binding protein 1 (predicted)  RGD1309281_predicted  similar to SETA binding protein 1; SB1 (predicted)  Symbol and Name updated 1299863 APPROVED
2005-01-20 RGD1309281_predicted  similar to SETA binding protein 1; SB1 (predicted)  LOC292735_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC292735_predicted  similar to SETA binding protein 1; SB1 (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL