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Gene: Zkscan3 (zinc finger with KRAB and SCAN domains 3) Rattus norvegicus

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Symbol:

Zkscan3

Name:

zinc finger with KRAB and SCAN domains 3

RGD ID:

1305753

Description:

Predicted to enable DNA-binding transcription repressor activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and chromatin binding activity. Predicted to be involved in several processes, including negative regulation of autophagy; negative regulation of cellular senescence; and regulation of DNA-templated transcription. Predicted to be located in cytoplasm and nucleus. Orthologous to several human genes including ZKSCAN3 (zinc finger with KRAB and SCAN domains 3); INTERACTS WITH 2,4-dinitrotoluene; 2,6-dinitrotoluene; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC306977; MGC108865; Zfp307; zinc finger protein 307; zinc finger protein with KRAB and SCAN domains 3

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	47,912,816 - 47,928,553 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	17	47,912,912 - 47,928,551 (+)	Ensembl				GRCr8
mRatBN7.2	17	43,217,168 - 43,232,828 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	43,217,222 - 43,232,827 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	17	45,274,623 - 45,290,236 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	17	50,033,731 - 50,049,344 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	17	44,524,146 - 44,539,759 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	17	45,247,724 - 45,263,422 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	45,247,776 - 45,263,418 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	17	58,204,677 - 58,220,555 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	17	50,862,534 - 50,901,252 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	17	53,235,157 - 53,250,769 (-)	NCBI		Celera
RGSC_v3.1	17	50,865,374 - 50,880,759 (+)	NCBI
Cytogenetic Map	17	p11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Colorectal Neoplasms (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2,4-dinitrotoluene (EXP)

2,6-dinitrotoluene (EXP)

4-hydroxyphenyl retinamide (ISO)

5-fluorouracil (ISO)

6-propyl-2-thiouracil (EXP)

acrylamide (ISO)

aflatoxin B1 (ISO)

alpha,alpha-trehalose (ISO)

amitrole (EXP)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

carbon nanotube (ISO)

clobetasol (ISO)

copper(II) sulfate (ISO)

crocidolite asbestos (ISO)

cyclosporin A (ISO)

Dibutyl phosphate (ISO)

dorsomorphin (ISO)

epoxiconazole (ISO)

fulvestrant (ISO)

GSK-J4 (ISO)

lactulose (ISO)

lipopolysaccharide (ISO)

melibiose (ISO)

methimazole (EXP)

methotrexate (ISO)

nefazodone (EXP)

nickel atom (ISO)

nimesulide (EXP)

paracetamol (ISO)

phenobarbital (ISO)

propiconazole (EXP)

resveratrol (EXP)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

SB 431542 (ISO)

sodium arsenate (ISO)

styrene (ISO)

sulfadimethoxine (EXP)

temozolomide (ISO)

tetraphene (ISO)

titanium dioxide (ISO)

trichostatin A (ISO)

triphenyl phosphate (ISO)

valproic acid (ISO)

vanadyl sulfate (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

DNA-templated transcription (IEA)

lysosome organization (ISO)

negative regulation of autophagy (ISO)

negative regulation of cellular senescence (ISO)

negative regulation of DNA-templated transcription (ISO)

negative regulation of transcription by RNA polymerase II (ISO)

positive regulation of DNA-templated transcription (ISO)

regulation of DNA-templated transcription (IEA)

regulation of transcription by RNA polymerase II (IBA)

Cellular Component

cytoplasm (ISO)

nucleoplasm (ISO)

nucleus (IEA,ISO)

Molecular Function

chromatin binding (ISO)

DNA binding (IEA,ISO)

DNA-binding transcription factor activity (ISO)

DNA-binding transcription factor activity, RNA polymerase II-specific (IBA)

DNA-binding transcription repressor activity, RNA polymerase II-specific (ISO)

metal ion binding (IEA)

protein binding (ISO)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (IBA,ISO)

sequence-specific DNA binding (ISO)

zinc ion binding (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:18940803	PMID:23434374

Genomics

Comparative Map Data

Zkscan3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	47,912,816 - 47,928,553 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	17	47,912,912 - 47,928,551 (+)	Ensembl				GRCr8
mRatBN7.2	17	43,217,168 - 43,232,828 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	43,217,222 - 43,232,827 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	17	45,274,623 - 45,290,236 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	17	50,033,731 - 50,049,344 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	17	44,524,146 - 44,539,759 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	17	45,247,724 - 45,263,422 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	45,247,776 - 45,263,418 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	17	58,204,677 - 58,220,555 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	17	50,862,534 - 50,901,252 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	17	53,235,157 - 53,250,769 (-)	NCBI		Celera
RGSC_v3.1	17	50,865,374 - 50,880,759 (+)	NCBI
Cytogenetic Map	17	p11	NCBI

ZKSCAN3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	28,349,878 - 28,369,172 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	28,349,911 - 28,369,172 (+)	Ensembl			hg38	GRCh38
GRCh37	6	28,317,724 - 28,336,949 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	28,425,738 - 28,442,503 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	6	28,425,737 - 28,442,502	NCBI
Celera	6	29,924,132 - 29,940,962 (+)	NCBI		Celera
Cytogenetic Map	6	p22.1	NCBI
HuRef	6	28,124,766 - 28,144,005 (+)	NCBI		HuRef
CHM1_1	6	28,320,076 - 28,339,339 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	6	28,221,444 - 28,240,735 (+)	NCBI		T2T-CHM13v2.0

Zkscan3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	21,571,174 - 21,586,942 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	21,571,173 - 21,586,925 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	13	21,387,004 - 21,402,755 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	21,387,003 - 21,402,755 (-)	Ensembl			mm10	GRCm38
MGSCv37	13	21,478,873 - 21,494,624 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	13	21,394,546 - 21,412,211 (-)	NCBI		MGSCv36	mm8
Celera	13	21,652,946 - 21,668,698 (-)	NCBI		Celera
Cytogenetic Map	13	A3.1	NCBI
cM Map	13	7.78	NCBI

ZKSCAN3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	42,971,264 - 42,990,882 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	38,972,274 - 38,995,206 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	28,157,736 - 28,174,906 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	28,828,297 - 28,847,596 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	28,828,298 - 28,847,596 (+)	Ensembl			panPan2	panpan1.1

Zkscan3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	28,778,053 - 28,795,403 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936772	43 - 7,099 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ZKSCAN3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	17	44,199,513 - 44,216,456 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	17	44,200,164 - 44,216,706 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666044	28,042,781 - 28,062,276 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Variants

Variants in Zkscan3
68 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	647
Count of miRNA genes:	270
Interacting mature miRNAs:	347
Transcripts:	ENSRNOT00000024783, ENSRNOT00000066981
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
8552966	Pigfal18	Plasma insulin-like growth factor 1 level QTL 18	8.7		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	17	12860942	57860942	Rat
2302377	Scl61	Serum cholesterol level QTL 61	4.36		blood HDL cholesterol amount (VT:0000184)	serum high density lipoprotein cholesterol level (CMO:0000361)	17	6221998	58177198	Rat
1354654	Spl7	Serum phospholipid level QTL 7	5.5		blood phospholipid amount (VT:0006084)	blood phospholipid level (CMO:0001169)	17	38031354	83031354	Rat
70157	Niddm32	Non-insulin dependent diabetes mellitus QTL 32	4.34		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	17	22660799	55604694	Rat
9589151	Insul30	Insulin level QTL 30	8.82	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	17	12860942	57860942	Rat
1598871	Memor5	Memory QTL 5	5.3		exploratory behavior trait (VT:0010471)	total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)	17	40968017	89341781	Rat
1354628	Stl13	Serum triglyceride level QTL 13	3.8		blood triglyceride amount (VT:0002644)	blood triglyceride level (CMO:0000118)	17	21498994	50592236	Rat
1354629	Scl31	Serum cholesterol level QTL 31	4.1		blood cholesterol amount (VT:0000180)	blood total cholesterol level (CMO:0000051)	17	38031354	83031354	Rat
1600398	Edcs5	Endometrial carcinoma susceptibility QTL 5	2.2		uterus morphology trait (VT:0001120)	percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)	17	35446949	75762341	Rat
1559055	Bp278	Blood pressure QTL 278		0.04	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	17	23858926	68858926	Rat
9590154	Scort9	Serum corticosterone level QTL 9	23.57	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	17	12860942	57860942	Rat
152025238	Slep14	Serum leptin concentration QTL 14	4.62		blood leptin amount (VT:0005667)		17	24390595	84432719	Rat
1354638	Insul1	Insulin level QTL 1	4.8		blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	17	38031354	83031354	Rat
1354635	Bp245	Blood pressure QTL 245	6		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	17	38031354	83031354	Rat
1331765	Hrtrt15	Heart rate QTL 15	4.094		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	17	15537025	60531414	Rat
7411666	Foco31	Food consumption QTL 31	11.4	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	17	12860942	57860942	Rat
1300148	Bp192	Blood pressure QTL 192	3.47		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	17	46050126	91050126	Rat
2303627	Vencon8	Ventilatory control QTL 8		0.001	respiration trait (VT:0001943)	tidal volume (CMO:0000222)	17	4733534	49733534	Rat
4889955	Bss93	Bone structure and strength QTL 93	4.4		tibia size trait (VT:0100001)	tibia cortical bone volume to tibia total bone volume ratio (CMO:0001727)	17	27233445	65155015	Rat
2324621	Coatc5	Coat color QTL 5			coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	17	42654895	87654895	Rat
1300129	Rf25	Renal function QTL 25	3.03		blood creatinine amount (VT:0005328)	creatinine clearance (CMO:0000765)	17	41062352	86062352	Rat
1354663	Bvd5	Brain ventricular dilatation QTL 5	3.51	0.001	brain ventricle morphology trait (VT:0000822)	hydrocephalus severity score (CMO:0001881)	17	32199534	86201342	Rat
152023740	Bp406	Blood pressure QTL 406	6.06		arterial blood pressure trait (VT:2000000)		17	24136127	84432719	Rat
7488966	Bp370	Blood pressure QTL 370		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	17	23858926	68858926	Rat
152023737	Bp405	Blood pressure QTL 405	5.06		arterial blood pressure trait (VT:2000000)			24136127	84432719	Rat
152023736	Bp404	Blood pressure QTL 404	3.78		arterial blood pressure trait (VT:2000000)		17	24136127	84432719	Rat
724528	Uae4	Urinary albumin excretion QTL 4	4.9	0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	17	36045537	81045537	Rat
70210	Cm15	Cardiac mass QTL 15	6.5		heart right ventricle mass (VT:0007033)	heart right ventricle wet weight (CMO:0000072)	17	30066472	75066472	Rat
152023626	Bp403	Blood pressure QTL 403	3.86		arterial blood pressure trait (VT:2000000)		17	24136127	84432719	Rat
2301412	Kidm40	Kidney mass QTL 40		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	17	42388164	87388164	Rat
9590107	Sffal7	Serum free fatty acids level QTL 7	4.81	0.001	blood free fatty acid amount (VT:0001553)	plasma free fatty acids level (CMO:0000546)	17	33104645	78104645	Rat
724549	Niddm56	Non-insulin dependent diabetes mellitus QTL 56		0.03	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	17	32199534	49497050	Rat
1581512	Cm55	Cardiac mass QTL 55	2.8	0.05	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	17	27233445	83975845	Rat
10054088	Scort28	Serum corticosterone level QTL 28	2.04	0.0102	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	17	4733534	49733534	Rat
61394	Bp8	Blood pressure QTL 8	2.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	17	23286322	64246472	Rat
9589057	Scfw6	Subcutaneous fat weight QTL 6	8.62	0.001	subcutaneous adipose mass (VT:1000472)	abdominal subcutaneous fat pad weight (CMO:0002069)	17	12860942	57860942	Rat
2317045	Aia11	Adjuvant induced arthritis QTL 11	4.06		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	17	26522051	71522051	Rat
10450503	Bp386	Blood pressure QTL 386		0.28	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	17	22019705	67019705	Rat
9590088	Insglur7	Insulin/glucose ratio QTL 7	20.38	0.001	blood insulin amount (VT:0001560)	calculated plasma insulin level (CMO:0002170)	17	12860942	57860942	Rat
2313854	Bp343	Blood pressure QTL 343	3.9		life span trait (VT:0005372)	age at time of death (CMO:0001193)	17	32199534	55604694	Rat
2317053	Aia25	Adjuvant induced arthritis QTL 25	2.69		joint integrity trait (VT:0010548)	right rear ankle joint diameter (CMO:0002150)	17	10604694	55604694	Rat
8552928	Pigfal9	Plasma insulin-like growth factor 1 level QTL 9	9		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	17	33104645	78104645	Rat
12904736	Cm121	Cardiac mass QTL 121		0.043	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	17	42388164	87388164	Rat
12903980	Cm120	Cardiac mass QTL 120		0.002	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	17	23858926	68858926	Rat
4889891	Eae32	Experimental allergic encephalomyelitis QTL 32	4.8	0.0002	nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis severity score (CMO:0001419)	17	27233445	72233445	Rat
12903981	Am17	Aortic mass QTL 17		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	17	23858926	68858926	Rat
12903982	Kidm70	Kidney mass QTL 70		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	17	23858926	68858926	Rat
12903978	Cm118	Cardiac mass QTL 118		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	17	23858926	68858926	Rat
1354619	Bp242	Blood pressure QTL 242	6.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	17	37687877	82687877	Rat
12903979	Cm119	Cardiac mass QTL 119		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	17	23858926	68858926	Rat

Markers in Region

AI132359

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	17	43,232,360 - 43,232,587 (+)	MAPPER	mRatBN7.2
Rnor_6.0	17	45,262,950 - 45,263,180	NCBI	Rnor6.0
Rnor_5.0	17	58,204,917 - 58,205,147	UniSTS	Rnor5.0
Celera	17	53,235,397 - 53,235,623	UniSTS
Cytogenetic Map	17	q11	UniSTS

RH143072

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	17	43,226,055 - 43,226,156 (+)	MAPPER	mRatBN7.2
Rnor_6.0	17	45,256,635 - 45,256,735	NCBI	Rnor6.0
Rnor_5.0	17	58,211,556 - 58,211,656	UniSTS	Rnor5.0
RGSC_v3.4	17	50,871,374 - 50,871,474	UniSTS	RGSC3.4
Celera	17	53,241,828 - 53,241,928	UniSTS
Cytogenetic Map	17	q11	UniSTS

RH124729

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	17	43,232,557 - 43,232,654 (+)	MAPPER	mRatBN7.2
Rnor_6.0	17	45,263,151 - 45,263,247	NCBI	Rnor6.0
Rnor_5.0	17	58,204,850 - 58,204,946	UniSTS	Rnor5.0
Celera	17	53,235,330 - 53,235,426	UniSTS
Cytogenetic Map	17	q11	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001012053	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001440266	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001440267	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001440268	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001440269	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001440270	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006254096	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006254099	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006254101	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008771726	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600550	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600551	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600552	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039095714	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039095715	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039095717	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039095718	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276448	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276449	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276450	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276451	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276452	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276453	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276454	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276455	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276456	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276457	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC089847	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474072	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CK602433	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000080655 ⟹ ENSRNOP00000072953

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	17	47,919,176 - 47,922,356 (+)	Ensembl
mRatBN7.2 Ensembl	17	43,223,450 - 43,226,630 (+)	Ensembl
Rnor_6.0 Ensembl	17	45,247,794 - 45,263,418 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000081063 ⟹ ENSRNOP00000069061

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	17	47,912,912 - 47,928,551 (+)	Ensembl
mRatBN7.2 Ensembl	17	43,217,222 - 43,232,827 (+)	Ensembl
Rnor_6.0 Ensembl	17	45,247,776 - 45,262,858 (+)	Ensembl

RefSeq Acc Id:

NM_001012053 ⟹ NP_001012053

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	47,912,941 - 47,928,553 (+)	NCBI
mRatBN7.2	17	43,217,215 - 43,232,827 (+)	NCBI
Rnor_6.0	17	45,247,794 - 45,263,420 (+)	NCBI
Rnor_5.0	17	58,204,677 - 58,220,555 (-)	NCBI
RGSC_v3.4	17	50,862,534 - 50,901,252 (+)	RGD
Celera	17	53,235,157 - 53,250,769 (-)	RGD

Sequence:

show sequence

GCGGGGTGCTACGAGGTGCTGCGTTCGCGGTATTTTGCAGAAATACAACTCACAACTACATTGA
AACAGGAGAACTGCTTGGTTCGGGATGGCTAGAGAATCAAGGGAAAGCACAACCCTGGACTCAC
ACTCTGCAGAGGACCAGATGGAGCTACTGGTCATAAAGGTGGAACAAGAAGAGGTCTCCCCATT
GGCAGAGGAGACCAGTTGGCTGGGCAGTCCTGGGCCTGACCGCTCCCGCCAGCGCTTCCGTGCT
TTCCGCTACCCAGACGCAGCAGGGCCCCGGCAGGCGCTGAGCCGGCTCCGCGAGCTATGCAGAC
AGTGGCTGCGGCCAGACATGCACAGCAAGGAGCAGATCCTGGAGCTGCTGGTGCTGGAGCAGTT
CCTGACCATCCTGCCAGGGGAGCTGCAGGCCTGGGTGCGCGAGCAGCACCCCGACAGCGGAGAG
GAGGTGGTGGCACTGCTGGAGTACTTGGACAGGCAGCTGGATGAGACCCCTCCACAGGTTCCAG
ATGATGACGATGGGCAGGAACTCCTTTGTTCCAAGGCAGTACTGTTGACATCAGCTCAAGGCTC
AGAAAGTAGCCAGATGGAGTCCATGGAGCCTTTGCTTAAACAGGAATCTTTGGGATCCCTGCCC
TCAGAAGTTAGAGTCACCCAGGCAGGGCATTGTGGAGAAGATGGAGTGACAGCTACCAGGCTCA
CATCAGAGCTGCAGGGGCTGCTGAAAATGGAAGATGTAGCCCCAGGCCTTTCCCCGAGATGGAC
AGAGCAGGATTCATCTCAGATGAACCTCTACAAAGATGAAATGCAGGAGAACTCTGGCAGCCTG
GTTTCCCTGGATGAGAACATGCAAACTAAGGTTAGGGACTTGCCTCCAGCTGAAGAAAACACAG
AACAAAAGCCTGAGCAGACAGTGTGCTTCCTGGGTGAAGACACTGTCCAGATTCCTACAGGTAC
AGAAGCCAGTGAGCAGGAAGGCAAGTTACAGACAACACAGAAGAATGCCACGGGAAACAGGCGG
TTCTACTGCCGTGAATGTGGGAAGAGCTTTGCTCAGAGTTCAGGCCTAAGTAAACACAAAAGAA
TCCACACTGGATTGAAACCCTATGAATGTGAGGAGTGTGGCAAAGCCTTCATTGGGAGCTCAGC
TCTCATTATTCATCAGAGAGTTCACACTGGTGAGAAGCCATATGAGTGTGAAGAATGTGGTAAG
GCCTTCAGTCACAGCTCAGATCTCATCAAGCACCAGAGAACCCACACTGGAGAAAAGCCCTACG
AGTGTGATGACTGTGGGAAAACCTTCACTCAGAGCTGCAGCCTCCTTGAACATCACAGAATTCA
CACTGGGGAGAAGCCATACCAGTGCAACATGTGTCCCAAAGCCTTTAGGCGTAGCTCACATCTC
CTGAGACATCAGAGGACCCACACTGGGGATAAAGATTTTTTTGTTCCAGAACCTTACTGGGAAA
GTCAGAGTAGGGTGGAAAGCCATTGGGAAAATATTGAGACTCCTGTGTCTTATCAATGCAATGA
TTGTGAGAGAAGTTTTAGTAGGATTACAAGCCTTATTGAACACCAAAAAGTACACACTGGTGAG
AAGCCCTTTGAATGCCAGACCTGTGGAAAAGGCTTTACCCGACCTTCATACCTTATTCAACATC
AGAGAAGACACACGGGGAAGAAAACTTCTGTCACAGTGACCCCTGCTGTACATTCCGAAGTTGG
TGTTCAACTGTCATTGAACTGAAGCCGCTCTGGAGCTCTTAATGACTGCAGAAGTCATAGGCTA
GGGCTCTATTTAATAATGTACATCCTCAGATATTAGGAATCTGACTAAGACTTATTATCTTCTA
CATTCTAGAAGGTGACTATAAAAAAAAACTTATTTCATAGGAGAGTTGTCTGCAAGAGTTCTAA
CCTATTGGAATTAAATGGGCTTCCTGACTGTCAAATTGCCTTCCCTTGGCCTGCACTTCCTGTC
TCTTGAGGGAAAGGTTATGCTTTTTTTGGGAGGGGTGGGGGTGGGGGAAGTTACTCTGACCCTT
CTTTAGGCTAATGAGCCCTTCACGTGTGGTCAGACTTGGAACTCTTATGTCCTGCTTTGTGCCT
TGTATACAGGTGCTAACAAACATTTATTAAATATACTGGTGAGATTTCCTACATAGCTCTGAAA
ACCCATTATCTGGAAATTCTCACCAAGGCCATTTGTATATCTTTGAAAAAAAAAGATAATGTTT
TAGATTGAATCAATGTAGTACTGCTTTGTTTTTGTTTTTTGCCAAGTACCCCAACTTGGCAGGG
AAGAGGTGAAGGTGAGGTTATTGTGCTAGAATTCTTTAACTCTTTACCTAATTTAGGAATTCTG
TGAGAGTGCCTTAAATAGCTTTCTTAGCATTAAGTCATTGTGAATGTGCCACCCATGGAATTCC
ACTAATATTTTTTTCCTGTTAATTTTGTTACTCTTGAGAGAACAGAAAAGAAAAGAAAAAGTTA
AAAAAAAAAAACTTTCCTACTCATGTAGTGTGAAAATCAGTTTCAGAATAAAGTGATCAATGTC
TAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006254099 ⟹ XP_006254161

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	47,912,904 - 47,928,553 (+)	NCBI
mRatBN7.2	17	43,217,196 - 43,232,828 (+)	NCBI
Rnor_6.0	17	45,247,749 - 45,263,422 (+)	NCBI
Rnor_5.0	17	58,204,677 - 58,220,555 (-)	NCBI

Sequence:

show sequence

CTGTGCCCCGCCCCCCGGGGTCGGACTTTCGACACTTTTGTGACTGCGGGGTGCTACGAGGTGC
TGCGTTCGCGGGTGGGTTCGGGTTCCCTCCTGTTACGGTCCTCCCGCGGGGGCCGGCTGCTTGC
GGGTGGTGGGGATGGGACAAAACCTCTTCCTCCGCGGCCTAATGGCTCCGGGAAAATAAAATCG
GTGGCTACTTGGGCCGAGCGCCGGACAGGGCCTCGGGCGCCTCGCCTCAGGCCGGTTCCGGGTG
TCTGGTCAGTCTCAGGGCGTTTGGCGATGGGATTCTCGGGTCTTGTACTTAAGCTTTGAAAATG
GGAGACGTCACAGTTTTGCTTTTCCTGGAGACAAGTATTTTGCAGAAATACAACTCACAACTAC
ATTGAAACAGGAGAACTGCTTGGTTCGGGATGGCTAGAGAATCAAGGGAAAGCACAACCCTGGA
CTCACACTCTGCAGAGGACCAGATGGAGCTACTGGTCATAAAGGTGGAACAAGAAGAGGTCTCC
CCATTGGCAGAGGAGACCAGTTGGCTGGGCAGTCCTGGGCCTGACCGCTCCCGCCAGCGCTTCC
GTGCTTTCCGCTACCCAGACGCAGCAGGGCCCCGGCAGGCGCTGAGCCGGCTCCGCGAGCTATG
CAGACAGTGGCTGCGGCCAGACATGCACAGCAAGGAGCAGATCCTGGAGCTGCTGGTGCTGGAG
CAGTTCCTGACCATCCTGCCAGGGGAGCTGCAGGCCTGGGTGCGCGAGCAGCACCCCGACAGCG
GAGAGGAGGTGGTGGCACTGCTGGAGTACTTGGACAGGCAGCTGGATGAGACCCCTCCACAGGT
TCCAGATGATGACGATGGGCAGGAACTCCTTTGTTCCAAGGCAGTACTGTTGACATCAGCTCAA
GGCTCAGAAAGTAGCCAGATGGAGTCCATGGAGCCTTTGCTTAAACAGGAATCTTTGGGATCCC
TGCCCTCAGAAGTTAGAGTCACCCAGGCAGGGCATTGTGGAGAAGATGGAGTGACAGCTACCAG
GCTCACATCAGAGCTGCAGGGGCTGCTGAAAATGGAAGATGTAGCCCCAGGCCTTTCCCCGAGA
TGGACAGAGCAGGATTCATCTCAGATGAACCTCTACAAAGATGAAATGCAGGAGAACTCTGGCA
GCCTGGTTTCCCTGGATGAGAACATGCAAACTAAGGTTAGGGACTTGCCTCCAGCTGAAGAAAA
CACAGAACAAAAGCCTGAGCAGACAGTGTGCTTCCTGGGTGAAGACACTGTCCAGATTCCTACA
GGTACAGAAGCCAGTGAGCAGGAAGGCAAGTTACAGACAACACAGAAGAATGCCACGGGAAACA
GGCGGTTCTACTGCCGTGAATGTGGGAAGAGCTTTGCTCAGAGTTCAGGCCTAAGTAAACACAA
AAGAATCCACACTGGATTGAAACCCTATGAATGTGAGGAGTGTGGCAAAGCCTTCATTGGGAGC
TCAGCTCTCATTATTCATCAGAGAGTTCACACTGGTGAGAAGCCATATGAGTGTGAAGAATGTG
GTAAGGCCTTCAGTCACAGCTCAGATCTCATCAAGCACCAGAGAACCCACACTGGAGAAAAGCC
CTACGAGTGTGATGACTGTGGGAAAACCTTCACTCAGAGCTGCAGCCTCCTTGAACATCACAGA
ATTCACACTGGGGAGAAGCCATACCAGTGCAACATGTGTCCCAAAGCCTTTAGGCGTAGCTCAC
ATCTCCTGAGACATCAGAGGACCCACACTGGGGATAAAGATTTTTTTGTTCCAGAACCTTACTG
GGAAAGTCAGAGTAGGGTGGAAAGCCATTGGGAAAATATTGAGACTCCTGTGTCTTATCAATGC
AATGATTGTGAGAGAAGTTTCAGTAGGATTACAAGCCTTATTGAACACCAAAAAGTACACACTG
GTGAGAAGCCCTTTGAATGCCAGACCTGTGGAAAAGGCTTCACCCGACCTTCATACCTTATTCA
ACATCAGAGAAGACACACGGGGAAGAAAACTTCTGTCACAGTGACCCCTGCTGTACATTCCGAA
GTTGGTGTTCAACTGTCATTGAACTGAAGCCGCTCTGGAGCTCTTAATGACTGCAGAAGTCATA
GGCTAGGGCTCTATTTAATAATGTACATCCTCAGATATTAGGAATCTGACTAAGACTTATTATC
TTCTACATTCTAGAAGGTGACTATAAAAAAAAACTTATTTCATAGGAGAGTTGTCTGCAAGAGT
TCTAACCTATTGGAATTAAATGGGCTTCCTGACTGTCAAATTGCCTTCCCTTGGCCTGCACTTC
CTGTCTCTTGAGGGAAAGGTTATGCTTTTTTTGGGAGGGGTGGGGGTGGGGGAAGTTACTCTGA
CCCTTCTTTAGGCTAATGAGCCCTTCACGTGTGGTCAGACTTGGAACTCTTATGTCCTGCTTTG
TGCCTTGTATACAGGTGCTAANAAACAAACATTTATTAAATATACTGGTGAGATTTCCTACATA
GCTCTGAAAACCCATTATCTGGAAATTCTCACCAAGGCCATTTGTATATCTTTGAAAAAAAAAG
ATAATGTTTTAGATTGAATCAATGTAGTACTGCTTTGTTTTTGTTTTTTGCCAAGTACCCCAAC
TTGGCAGGGAAGAGGTGAAGGTGAGGTTATTGTGCTAGAATTCTTTAACTCTTTACCTAATTTA
GGAATTCTGTGAGAGTGCCTTAAATAGCTTTCTTAGCATTAAGTCATTGTGAATGTGCCACCCA
TGGAATTCCACTAATATTTTTTTCCTGTTAATTTTGTTACTCTTGAGAGAACAGAAAAGAAAAG
AAAAAGTTAAAAAAAAAAAACTTTCCTACTCATGTAGTGTGAAAATCAGTTTCAGAATAAAGTG
ATCAATGTCTAAGG

hide sequence

RefSeq Acc Id:

XM_006254101 ⟹ XP_006254163

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	47,912,899 - 47,928,553 (+)	NCBI
mRatBN7.2	17	43,217,168 - 43,232,828 (+)	NCBI
Rnor_6.0	17	45,247,724 - 45,263,422 (+)	NCBI
Rnor_5.0	17	58,204,677 - 58,220,555 (-)	NCBI

Sequence:

show sequence

GGTGCCTAGAGAAGCCGGAAGTGCTCTGTGCCCCGCCCCCCGGGGTCGGACTTTCGACACTTTT
GTGACTGCGGGGTGCTACGAGGTGCTGCGTTCGCGGTGGGAGGAAGAGCTTGAGAAACAGGAGG
AGCATCTAACAGTGAAGAAGGATAAGGACCCTGGTTATTTTGCAGAAATACAACTCACAACTAC
ATTGAAACAGGAGAACTGCTTGGTTCGGGATGGCTAGAGAATCAAGGGAAAGCACAACCCTGGA
CTCACACTCTGCAGAGGACCAGATGGAGCTACTGGTCATAAAGGTGGAACAAGAAGAGGTCTCC
CCATTGGCAGAGGAGACCAGTTGGCTGGGCAGTCCTGGGCCTGACCGCTCCCGCCAGCGCTTCC
GTGCTTTCCGCTACCCAGACGCAGCAGGGCCCCGGCAGGCGCTGAGCCGGCTCCGCGAGCTATG
CAGACAGTGGCTGCGGCCAGACATGCACAGCAAGGAGCAGATCCTGGAGCTGCTGGTGCTGGAG
CAGTTCCTGACCATCCTGCCAGGGGAGCTGCAGGCCTGGGTGCGCGAGCAGCACCCCGACAGCG
GAGAGGAGGTGGTGGCACTGCTGGAGTACTTGGACAGGCAGCTGGATGAGACCCCTCCACAGGT
TCCAGATGATGACGATGGGCAGGAACTCCTTTGTTCCAAGGCAGTACTGTTGACATCAGCTCAA
GGCTCAGAAAGTAGCCAGATGGAGTCCATGGAGCCTTTGCTTAAACAGGAATCTTTGGGATCCC
TGCCCTCAGAAGTTAGAGTCACCCAGGCAGGGCATTGTGGAGAAGATGGAGTGACAGCTACCAG
GCTCACATCAGAGCTGCAGGGGCTGCTGAAAATGGAAGATGTAGCCCCAGGCCTTTCCCCGAGA
TGGACAGAGCAGGATTCATCTCAGATGAACCTCTACAAAGATGAAATGCAGGAGAACTCTGGCA
GCCTGGTTTCCCTGGATGAGAACATGCAAACTAAGGTTAGGGACTTGCCTCCAGCTGAAGAAAA
CACAGAACAAAAGCCTGAGCAGACAGTGTGCTTCCTGGGTGAAGACACTGTCCAGATTCCTACA
GGTACAGAAGCCAGTGAGCAGGAAGGCAAGTTACAGACAACACAGAAGAATGCCACGGGAAACA
GGCGGTTCTACTGCCGTGAATGTGGGAAGAGCTTTGCTCAGAGTTCAGGCCTAAGTAAACACAA
AAGAATCCACACTGGATTGAAACCCTATGAATGTGAGGAGTGTGGCAAAGCCTTCATTGGGAGC
TCAGCTCTCATTATTCATCAGAGAGTTCACACTGGTGAGAAGCCATATGAGTGTGAAGAATGTG
GTAAGGCCTTCAGTCACAGCTCAGATCTCATCAAGCACCAGAGAACCCACACTGGAGAAAAGCC
CTACGAGTGTGATGACTGTGGGAAAACCTTCACTCAGAGCTGCAGCCTCCTTGAACATCACAGA
ATTCACACTGGGGAGAAGCCATACCAGTGCAACATGTGTCCCAAAGCCTTTAGGCGTAGCTCAC
ATCTCCTGAGACATCAGAGGACCCACACTGGGGATAAAGATTTTTTTGTTCCAGAACCTTACTG
GGAAAGTCAGAGTAGGGTGGAAAGCCATTGGGAAAATATTGAGACTCCTGTGTCTTATCAATGC
AATGATTGTGAGAGAAGTTTCAGTAGGATTACAAGCCTTATTGAACACCAAAAAGTACACACTG
GTGAGAAGCCCTTTGAATGCCAGACCTGTGGAAAAGGCTTCACCCGACCTTCATACCTTATTCA
ACATCAGAGAAGACACACGGGGAAGAAAACTTCTGTCACAGTGACCCCTGCTGTACATTCCGAA
GTTGGTGTTCAACTGTCATTGAACTGAAGCCGCTCTGGAGCTCTTAATGACTGCAGAAGTCATA
GGCTAGGGCTCTATTTAATAATGTACATCCTCAGATATTAGGAATCTGACTAAGACTTATTATC
TTCTACATTCTAGAAGGTGACTATAAAAAAAAACTTATTTCATAGGAGAGTTGTCTGCAAGAGT
TCTAACCTATTGGAATTAAATGGGCTTCCTGACTGTCAAATTGCCTTCCCTTGGCCTGCACTTC
CTGTCTCTTGAGGGAAAGGTTATGCTTTTTTTGGGAGGGGTGGGGGTGGGGGAAGTTACTCTGA
CCCTTCTTTAGGCTAATGAGCCCTTCACGTGTGGTCAGACTTGGAACTCTTATGTCCTGCTTTG
TGCCTTGTATACAGGTGCTAANAAACAAACATTTATTAAATATACTGGTGAGATTTCCTACATA
GCTCTGAAAACCCATTATCTGGAAATTCTCACCAAGGCCATTTGTATATCTTTGAAAAAAAAAG
ATAATGTTTTAGATTGAATCAATGTAGTACTGCTTTGTTTTTGTTTTTTGCCAAGTACCCCAAC
TTGGCAGGGAAGAGGTGAAGGTGAGGTTATTGTGCTAGAATTCTTTAACTCTTTACCTAATTTA
GGAATTCTGTGAGAGTGCCTTAAATAGCTTTCTTAGCATTAAGTCATTGTGAATGTGCCACCCA
TGGAATTCCACTAATATTTTTTTCCTGTTAATTTTGTTACTCTTGAGAGAACAGAAAAGAAAAG
AAAAAGTTAAAAAAAAAAAACTTTCCTACTCATGTAGTGTGAAAATCAGTTTCAGAATAAAGTG
ATCAATGTCTAAGG

hide sequence

RefSeq Acc Id:

XM_008771726 ⟹ XP_008769948

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	47,912,917 - 47,928,553 (+)	NCBI
mRatBN7.2	17	43,217,196 - 43,232,828 (+)	NCBI
Rnor_6.0	17	45,247,830 - 45,263,422 (+)	NCBI

Sequence:

show sequence

TCGGGTTCCCTCCTGTTACGGTCCTCCCGCGGGGGCCGGCTGCTTGCGGGTGGTGGGGATGGGA
CAAAACCTCTTCCTCCGCGGCCTAATGGCTCCGGGAAAATAAAATCGGTGGCTACTTGGGCCGA
GCGCCGGACAGGGCCTCGGGCGCCTCGCCTCAGGCCGGTTCCGGGTGTCTGGTCAGTCTCAGGG
CGTTTGGCGATGGGATTCTCGGGTCTTGTACTTAAGCTTTGAAAATGGGAGACGTCACAGTTTT
GCTTTTCCTGGAGACAAGTGGGAGGAAGAGCTTGAGAAACAGGAGGAGCATCTAACAGTGAAGA
AGGATAAGGACCCTGGTTATTTTGCAGAAATACAACTCACAACTACATTGAAACAGGAGAACTG
CTTGGTTCGGGATGGCTAGAGAATCAAGGGAAAGCACAACCCTGGACTCACACTCTGCAGAGGA
CCAGATGGAGCTACTGGTCATAAAGGTGGAACAAGAAGAGGTCTCCCCATTGGCAGAGGAGACC
AGTTGGCTGGGCAGTCCTGGGCCTGACCGCTCCCGCCAGCGCTTCCGTGCTTTCCGCTACCCAG
ACGCAGCAGGGCCCCGGCAGGCGCTGAGCCGGCTCCGCGAGCTATGCAGACAGTGGCTGCGGCC
AGACATGCACAGCAAGGAGCAGATCCTGGAGCTGCTGGTGCTGGAGCAGTTCCTGACCATCCTG
CCAGGGGAGCTGCAGGCCTGGGTGCGCGAGCAGCACCCCGACAGCGGAGAGGAGGTGGTGGCAC
TGCTGGAGTACTTGGACAGGCAGCTGGATGAGACCCCTCCACAGGTTCCAGATGATGACGATGG
GCAGGAACTCCTTTGTTCCAAGGCAGTACTGTTGACATCAGCTCAAGGCTCAGAAAGTAGCCAG
ATGGAGTCCATGGAGCCTTTGCTTAAACAGGAATCTTTGGGATCCCTGCCCTCAGAAGTTAGAG
TCACCCAGGCAGGGCATTGTGGAGAAGATGGAGTGACAGCTACCAGGCTCACATCAGAGCTGCA
GGGGCTGCTGAAAATGGAAGATGTAGCCCCAGGCCTTTCCCCGAGATGGACAGAGCAGGATTCA
TCTCAGATGAACCTCTACAAAGATGAAATGCAGGAGAACTCTGGCAGCCTGGTTTCCCTGGATG
AGAACATGCAAACTAAGGTTAGGGACTTGCCTCCAGCTGAAGAAAACACAGAACAAAAGCCTGA
GCAGACAGTGTGCTTCCTGGGTGAAGACACTGTCCAGATTCCTACAGGTACAGAAGCCAGTGAG
CAGGAAGGCAAGTTACAGACAACACAGAAGAATGCCACGGGAAACAGGCGGTTCTACTGCCGTG
AATGTGGGAAGAGCTTTGCTCAGAGTTCAGGCCTAAGTAAACACAAAAGAATCCACACTGGATT
GAAACCCTATGAATGTGAGGAGTGTGGCAAAGCCTTCATTGGGAGCTCAGCTCTCATTATTCAT
CAGAGAGTTCACACTGGTGAGAAGCCATATGAGTGTGAAGAATGTGGTAAGGCCTTCAGTCACA
GCTCAGATCTCATCAAGCACCAGAGAACCCACACTGGAGAAAAGCCCTACGAGTGTGATGACTG
TGGGAAAACCTTCACTCAGAGCTGCAGCCTCCTTGAACATCACAGAATTCACACTGGGGAGAAG
CCATACCAGTGCAACATGTGTCCCAAAGCCTTTAGGCGTAGCTCACATCTCCTGAGACATCAGA
GGACCCACACTGGGGATAAAGATTTTTTTGTTCCAGAACCTTACTGGGAAAGTCAGAGTAGGGT
GGAAAGCCATTGGGAAAATATTGAGACTCCTGTGTCTTATCAATGCAATGATTGTGAGAGAAGT
TTCAGTAGGATTACAAGCCTTATTGAACACCAAAAAGTACACACTGGTGAGAAGCCCTTTGAAT
GCCAGACCTGTGGAAAAGGCTTCACCCGACCTTCATACCTTATTCAACATCAGAGAAGACACAC
GGGGAAGAAAACTTCTGTCACAGTGACCCCTGCTGTACATTCCGAAGTTGGTGTTCAACTGTCA
TTGAACTGAAGCCGCTCTGGAGCTCTTAATGACTGCAGAAGTCATAGGCTAGGGCTCTATTTAA
TAATGTACATCCTCAGATATTAGGAATCTGACTAAGACTTATTATCTTCTACATTCTAGAAGGT
GACTATAAAAAAAAACTTATTTCATAGGAGAGTTGTCTGCAAGAGTTCTAACCTATTGGAATTA
AATGGGCTTCCTGACTGTCAAATTGCCTTCCCTTGGCCTGCACTTCCTGTCTCTTGAGGGAAAG
GTTATGCTTTTTTTGGGAGGGGTGGGGGTGGGGGAAGTTACTCTGACCCTTCTTTAGGCTAATG
AGCCCTTCACGTGTGGTCAGACTTGGAACTCTTATGTCCTGCTTTGTGCCTTGTATACAGGTGC
TAANAAACAAACATTTATTAAATATACTGGTGAGATTTCCTACATAGCTCTGAAAACCCATTAT
CTGGAAATTCTCACCAAGGCCATTTGTATATCTTTGAAAAAAAAAGATAATGTTTTAGATTGAA
TCAATGTAGTACTGCTTTGTTTTTGTTTTTTGCCAAGTACCCCAACTTGGCAGGGAAGAGGTGA
AGGTGAGGTTATTGTGCTAGAATTCTTTAACTCTTTACCTAATTTAGGAATTCTGTGAGAGTGC
CTTAAATAGCTTTCTTAGCATTAAGTCATTGTGAATGTGCCACCCATGGAATTCCACTAATATT
TTTTTCCTGTTAATTTTGTTACTCTTGAGAGAACAGAAAAGAAAAGAAAAAGTTAAAAAAAAAA
AACTTTCCTACTCATGTAGTGTGAAAATCAGTTTCAGAATAAAGTGATCAATGTCTAAGG

hide sequence

RefSeq Acc Id:

XM_039095714 ⟹ XP_038951642

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	47,912,917 - 47,928,553 (+)	NCBI
mRatBN7.2	17	43,217,196 - 43,232,828 (+)	NCBI

RefSeq Acc Id:

XM_039095715 ⟹ XP_038951643

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	47,912,934 - 47,928,553 (+)	NCBI
mRatBN7.2	17	43,217,175 - 43,232,828 (+)	NCBI

RefSeq Acc Id:

XM_039095717 ⟹ XP_038951645

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	47,920,826 - 47,928,553 (+)	NCBI
mRatBN7.2	17	43,225,105 - 43,232,828 (+)	NCBI

RefSeq Acc Id:

XM_039095718 ⟹ XP_038951646

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	47,912,931 - 47,928,553 (+)	NCBI
mRatBN7.2	17	43,217,195 - 43,231,986 (+)	NCBI

RefSeq Acc Id:

XM_063276448 ⟹ XP_063132518

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	47,912,917 - 47,928,553 (+)	NCBI

RefSeq Acc Id:

XM_063276449 ⟹ XP_063132519

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	47,912,917 - 47,928,553 (+)	NCBI

RefSeq Acc Id:

XM_063276450 ⟹ XP_063132520

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	47,912,947 - 47,928,553 (+)	NCBI

RefSeq Acc Id:

XM_063276451 ⟹ XP_063132521

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	47,912,884 - 47,928,553 (+)	NCBI

RefSeq Acc Id:

XM_063276452 ⟹ XP_063132522

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	47,912,917 - 47,928,553 (+)	NCBI

RefSeq Acc Id:

XM_063276453 ⟹ XP_063132523

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	47,912,884 - 47,928,553 (+)	NCBI

RefSeq Acc Id:

XM_063276454 ⟹ XP_063132524

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	47,912,917 - 47,928,553 (+)	NCBI

RefSeq Acc Id:

XM_063276455 ⟹ XP_063132525

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	47,912,903 - 47,928,553 (+)	NCBI

RefSeq Acc Id:

XM_063276456 ⟹ XP_063132526

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	47,912,900 - 47,928,553 (+)	NCBI

RefSeq Acc Id:

XM_063276457 ⟹ XP_063132527

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	47,912,816 - 47,928,553 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001012053	(Get FASTA)	NCBI Sequence Viewer
	NP_001427195	(Get FASTA)	NCBI Sequence Viewer
	NP_001427196	(Get FASTA)	NCBI Sequence Viewer
	NP_001427197	(Get FASTA)	NCBI Sequence Viewer
	NP_001427198	(Get FASTA)	NCBI Sequence Viewer
	NP_001427199	(Get FASTA)	NCBI Sequence Viewer
	XP_006254161	(Get FASTA)	NCBI Sequence Viewer
	XP_006254163	(Get FASTA)	NCBI Sequence Viewer
	XP_008769948	(Get FASTA)	NCBI Sequence Viewer
	XP_038951642	(Get FASTA)	NCBI Sequence Viewer
	XP_038951643	(Get FASTA)	NCBI Sequence Viewer
	XP_038951645	(Get FASTA)	NCBI Sequence Viewer
	XP_038951646	(Get FASTA)	NCBI Sequence Viewer
	XP_063132518	(Get FASTA)	NCBI Sequence Viewer
	XP_063132519	(Get FASTA)	NCBI Sequence Viewer
	XP_063132520	(Get FASTA)	NCBI Sequence Viewer
	XP_063132521	(Get FASTA)	NCBI Sequence Viewer
	XP_063132522	(Get FASTA)	NCBI Sequence Viewer
	XP_063132523	(Get FASTA)	NCBI Sequence Viewer
	XP_063132524	(Get FASTA)	NCBI Sequence Viewer
	XP_063132525	(Get FASTA)	NCBI Sequence Viewer
	XP_063132526	(Get FASTA)	NCBI Sequence Viewer
	XP_063132527	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH89847	(Get FASTA)	NCBI Sequence Viewer
	EDL84542	(Get FASTA)	NCBI Sequence Viewer
	EDL84543	(Get FASTA)	NCBI Sequence Viewer
	EDL84544	(Get FASTA)	NCBI Sequence Viewer
	EDL84545	(Get FASTA)	NCBI Sequence Viewer
	EDL84546	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000069061
	ENSRNOP00000069061.1
	ENSRNOP00000072953.2

RefSeq Acc Id:

NP_001012053 ⟸ NM_001012053

- UniProtKB:

F7DP88 (UniProtKB/TrEMBL), Q5FVP7 (UniProtKB/TrEMBL), A6KN76 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MARESRESTTLDSHSAEDQMELLVIKVEQEEVSPLAEETSWLGSPGPDRSRQRFRAFRYPDAAG
PRQALSRLRELCRQWLRPDMHSKEQILELLVLEQFLTILPGELQAWVREQHPDSGEEVVALLEY
LDRQLDETPPQVPDDDDGQELLCSKAVLLTSAQGSESSQMESMEPLLKQESLGSLPSEVRVTQA
GHCGEDGVTATRLTSELQGLLKMEDVAPGLSPRWTEQDSSQMNLYKDEMQENSGSLVSLDENMQ
TKVRDLPPAEENTEQKPEQTVCFLGEDTVQIPTGTEASEQEGKLQTTQKNATGNRRFYCRECGK
SFAQSSGLSKHKRIHTGLKPYECEECGKAFIGSSALIIHQRVHTGEKPYECEECGKAFSHSSDL
IKHQRTHTGEKPYECDDCGKTFTQSCSLLEHHRIHTGEKPYQCNMCPKAFRRSSHLLRHQRTHT
GDKDFFVPEPYWESQSRVESHWENIETPVSYQCNDCERSFSRITSLIEHQKVHTGEKPFECQTC
GKGFTRPSYLIQHQRRHTGKKTSVTVTPAVHSEVGVQLSLN

hide sequence

RefSeq Acc Id:

XP_006254161 ⟸ XM_006254099

- Peptide Label:

isoform X1

- Sequence:

show sequence

MARESRESTTLDSHSAEDQMELLVIKVEQEEVSPLAEETSWLGSPGPDRSRQRFRAFRYPDAAG
PRQALSRLRELCRQWLRPDMHSKEQILELLVLEQFLTILPGELQAWVREQHPDSGEEVVALLEY
LDRQLDETPPQVPDDDDGQELLCSKAVLLTSAQGSESSQMESMEPLLKQESLGSLPSEVRVTQA
GHCGEDGVTATRLTSELQGLLKMEDVAPGLSPRWTEQDSSQMNLYKDEMQENSGSLVSLDENMQ
TKVRDLPPAEENTEQKPEQTVCFLGEDTVQIPTGTEASEQEGKLQTTQKNATGNRRFYCRECGK
SFAQSSGLSKHKRIHTGLKPYECEECGKAFIGSSALIIHQRVHTGEKPYECEECGKAFSHSSDL
IKHQRTHTGEKPYECDDCGKTFTQSCSLLEHHRIHTGEKPYQCNMCPKAFRRSSHLLRHQRTHT
GDKDFFVPEPYWESQSRVESHWENIETPVSYQCNDCERSFSRITSLIEHQKVHTGEKPFECQTC
GKGFTRPSYLIQHQRRHTGKKTSVTVTPAVHSEVGVQLSLN

hide sequence

RefSeq Acc Id:

XP_006254163 ⟸ XM_006254101

- Peptide Label:

isoform X1

- Sequence:

show sequence

MARESRESTTLDSHSAEDQMELLVIKVEQEEVSPLAEETSWLGSPGPDRSRQRFRAFRYPDAAG
PRQALSRLRELCRQWLRPDMHSKEQILELLVLEQFLTILPGELQAWVREQHPDSGEEVVALLEY
LDRQLDETPPQVPDDDDGQELLCSKAVLLTSAQGSESSQMESMEPLLKQESLGSLPSEVRVTQA
GHCGEDGVTATRLTSELQGLLKMEDVAPGLSPRWTEQDSSQMNLYKDEMQENSGSLVSLDENMQ
TKVRDLPPAEENTEQKPEQTVCFLGEDTVQIPTGTEASEQEGKLQTTQKNATGNRRFYCRECGK
SFAQSSGLSKHKRIHTGLKPYECEECGKAFIGSSALIIHQRVHTGEKPYECEECGKAFSHSSDL
IKHQRTHTGEKPYECDDCGKTFTQSCSLLEHHRIHTGEKPYQCNMCPKAFRRSSHLLRHQRTHT
GDKDFFVPEPYWESQSRVESHWENIETPVSYQCNDCERSFSRITSLIEHQKVHTGEKPFECQTC
GKGFTRPSYLIQHQRRHTGKKTSVTVTPAVHSEVGVQLSLN

hide sequence

RefSeq Acc Id:

XP_008769948 ⟸ XM_008771726

- Peptide Label:

isoform X1

- Sequence:

show sequence

MARESRESTTLDSHSAEDQMELLVIKVEQEEVSPLAEETSWLGSPGPDRSRQRFRAFRYPDAAG
PRQALSRLRELCRQWLRPDMHSKEQILELLVLEQFLTILPGELQAWVREQHPDSGEEVVALLEY
LDRQLDETPPQVPDDDDGQELLCSKAVLLTSAQGSESSQMESMEPLLKQESLGSLPSEVRVTQA
GHCGEDGVTATRLTSELQGLLKMEDVAPGLSPRWTEQDSSQMNLYKDEMQENSGSLVSLDENMQ
TKVRDLPPAEENTEQKPEQTVCFLGEDTVQIPTGTEASEQEGKLQTTQKNATGNRRFYCRECGK
SFAQSSGLSKHKRIHTGLKPYECEECGKAFIGSSALIIHQRVHTGEKPYECEECGKAFSHSSDL
IKHQRTHTGEKPYECDDCGKTFTQSCSLLEHHRIHTGEKPYQCNMCPKAFRRSSHLLRHQRTHT
GDKDFFVPEPYWESQSRVESHWENIETPVSYQCNDCERSFSRITSLIEHQKVHTGEKPFECQTC
GKGFTRPSYLIQHQRRHTGKKTSVTVTPAVHSEVGVQLSLN

hide sequence

Ensembl Acc Id:

ENSRNOP00000072953 ⟸ ENSRNOT00000080655

Ensembl Acc Id:

ENSRNOP00000069061 ⟸ ENSRNOT00000081063

RefSeq Acc Id:	XP_038951643 ⟸ XM_039095715
- Peptide Label:	isoform X1
- UniProtKB:	F7DP88 (UniProtKB/TrEMBL), A6KN76 (UniProtKB/TrEMBL), Q5FVP7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038951646 ⟸ XM_039095718
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038951642 ⟸ XM_039095714
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038951645 ⟸ XM_039095717
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063132527 ⟸ XM_063276457
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063132521 ⟸ XM_063276451
- Peptide Label:	isoform X1
- UniProtKB:	A6KN76 (UniProtKB/TrEMBL), F7DP88 (UniProtKB/TrEMBL), Q5FVP7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063132523 ⟸ XM_063276453
- Peptide Label:	isoform X1
- UniProtKB:	A6KN76 (UniProtKB/TrEMBL), F7DP88 (UniProtKB/TrEMBL), Q5FVP7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063132526 ⟸ XM_063276456
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063132525 ⟸ XM_063276455
- Peptide Label:	isoform X1
- UniProtKB:	A6KN76 (UniProtKB/TrEMBL), F7DP88 (UniProtKB/TrEMBL), Q5FVP7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063132519 ⟸ XM_063276449
- Peptide Label:	isoform X1
- UniProtKB:	A6KN76 (UniProtKB/TrEMBL), F7DP88 (UniProtKB/TrEMBL), Q5FVP7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063132518 ⟸ XM_063276448
- Peptide Label:	isoform X1
- UniProtKB:	A6KN76 (UniProtKB/TrEMBL), F7DP88 (UniProtKB/TrEMBL), Q5FVP7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063132522 ⟸ XM_063276452
- Peptide Label:	isoform X1
- UniProtKB:	A6KN76 (UniProtKB/TrEMBL), F7DP88 (UniProtKB/TrEMBL), Q5FVP7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063132524 ⟸ XM_063276454
- Peptide Label:	isoform X1
- UniProtKB:	A6KN76 (UniProtKB/TrEMBL), F7DP88 (UniProtKB/TrEMBL), Q5FVP7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063132520 ⟸ XM_063276450
- Peptide Label:	isoform X1
- UniProtKB:	A6KN76 (UniProtKB/TrEMBL), F7DP88 (UniProtKB/TrEMBL), Q5FVP7 (UniProtKB/TrEMBL)

Protein Domains

C2H2-type SCAN box

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q5FVP7-F1-model_v2	AlphaFold	Q5FVP7	1-554	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13700495

Promoter ID:

EPDNEW_R11018

Type:

multiple initiation site

Name:

Zkscan3_1

Description:

zinc finger with KRAB and SCAN domains 3

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	17	45,247,782 - 45,247,842	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1305753	AgrOrtholog
BioCyc Gene	G2FUF-9211	BioCyc
Ensembl Genes	ENSRNOG00000055000	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000080655.3	UniProtKB/TrEMBL
	ENSRNOT00000081063	ENTREZGENE
	ENSRNOT00000081063.3	UniProtKB/TrEMBL
Gene3D-CATH	1.10.4020.10	UniProtKB/TrEMBL
	6.10.140.140	UniProtKB/TrEMBL
	Classic Zinc Finger	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7373658	IMAGE-MGC_LOAD
InterPro	Ikaros_C2H2-ZF	UniProtKB/TrEMBL
	KRAB_dom_sf	UniProtKB/TrEMBL
	Krueppel-associated_box	UniProtKB/TrEMBL
	SCAN-C2H2_zinc_finger	UniProtKB/TrEMBL
	SCAN_sf	UniProtKB/TrEMBL
	Tscrpt_reg_SCAN	UniProtKB/TrEMBL
	Znf_C2H2/integrase_DNA-bd	UniProtKB/TrEMBL
	Znf_C2H2_sf	UniProtKB/TrEMBL
KEGG Report	rno:306977	UniProtKB/TrEMBL
MGC_CLONE	MGC:108865	IMAGE-MGC_LOAD
NCBI Gene	306977	ENTREZGENE
PANTHER	PROTEIN ZBED8-RELATED	UniProtKB/TrEMBL
	SCAN BOX DOMAIN-CONTAINING PROTEIN	UniProtKB/TrEMBL
	ZINC FINGER PROTEIN	UniProtKB/TrEMBL
	ZINC FINGER PROTEIN	UniProtKB/TrEMBL
	ZINC FINGER PROTEIN 501	UniProtKB/TrEMBL
	ZINC FINGER PROTEIN-RELATED	UniProtKB/TrEMBL
Pfam	KRAB	UniProtKB/TrEMBL
	SCAN	UniProtKB/TrEMBL
	zf-C2H2	UniProtKB/TrEMBL
PhenoGen	Zkscan3	PhenoGen
PROSITE	SCAN_BOX	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_1	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_2	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000055000	RatGTEx
SMART	KRAB	UniProtKB/TrEMBL
	SCAN	UniProtKB/TrEMBL
	ZnF_C2H2	UniProtKB/TrEMBL
Superfamily-SCOP	Krueppel-associated_box	UniProtKB/TrEMBL
	Retrovirus capsid dimerization domain-like	UniProtKB/TrEMBL
	SSF57667	UniProtKB/TrEMBL
UniProt	A0A0G2K493_RAT	UniProtKB/TrEMBL
	A6KN76	ENTREZGENE, UniProtKB/TrEMBL
	F7DP88	ENTREZGENE, UniProtKB/TrEMBL
	Q5FVP7	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-03-04	Zkscan3	zinc finger with KRAB and SCAN domains 3	Zfp307	zinc finger protein 307	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-12-06	Zfp307	zinc finger protein 307	Zfp307_predicted	zinc finger protein 307 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-12	Zfp307_predicted	zinc finger protein 307 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD