| 1560525 | Fzd8 | frizzled family receptor 8 | 17 | 65968739 | 65971724 | Rat |
| 628621 | Gjd4 | gap junction protein, delta 4 | 17 | 66004119 | 66006688 | Rat |
| 1585255 | LOC688753 | similar to G-protein coupled receptor 114 | 17 | 66008704 | 66009396 | Rat |
| 1565969 | Ccny | cyclin Y | 17 | 66039497 | 66168042 | Rat |
| 1306218 | LOC291249 | testis-specific transcript | 17 | 66253964 | 66383839 | Rat |
| 621837 | Lyst | lysosomal trafficking regulator | 17 | 66569478 | 66735402 | Rat |
| 3178 | Nid1 | nidogen 1 | 17 | 66857529 | 66930273 | Rat |
| 1307342 | Gpr137b | G protein-coupled receptor 137B | 17 | 66993915 | 67004339 | Rat |
| 1563548 | Ero1lb | ERO1-like beta (S. cerevisiae) | 17 | 67014925 | 67056056 | Rat |
| 1564010 | Edaradd | EDAR-associated death domain | 17 | 67056373 | 67143933 | Rat |
| 1582937 | LOC688970 | similar to serine/threonine kinase | 17 | 67167911 | 67169275 | Rat |
| 2323972 | LOC100362806 | serine/threonine-protein kinase MARK2-like | 17 | 67192724 | 67231770 | Rat |
| 1597479 | LOC689007 | similar to MAP/microtubule affinity-regulating kinase 3 | 17 | 67240175 | 67292090 | Rat |
| 1562989 | RGD1562989 | similar to serine/threonine kinase | 17 | 67477228 | 67480263 | Rat |
| 1562205 | RGD1562205 | similar to serine/threonine kinase | 17 | 67494566 | 67530122 | Rat |
| 1597388 | LOC689098 | similar to KP78a CG6715-PA | 17 | 67591036 | 67632085 | Rat |
| 1596196 | LOC689107 | similar to MAP/microtubule affinity-regulating kinase 3 | 17 | 67644851 | 67647782 | Rat |
| 1562435 | RGD1562435 | similar to MAP/microtubule affinity-regulating kinase 4 (MAP/microtubule affinity-regulating kinase like 1) | 17 | 67660173 | 67697115 | Rat |
| 1566040 | RGD1566040 | similar to MAP/microtubule affinity-regulating kinase 4 (MAP/microtubule affinity-regulating kinase like 1) | 17 | 67719008 | 67720852 | Rat |
| 1596159 | Smim13 | small integral membrane protein 13 | 17 | 67728989 | 67729445 | Rat |
| 1596111 | LOC689193 | similar to MAP/microtubule affinity-regulating kinase 4 (MAP/microtubule affinity-regulating kinase-like 1) | 17 | 67765423 | 67768357 | Rat |
| 1594846 | LOC689206 | similar to serine/threonine kinase | 17 | 67809910 | 67815114 | Rat |
| 1566047 | RGD1566047 | similar to MAP/microtubule affinity-regulating kinase 4 (MAP/microtubule affinity-regulating kinase like 1) | 17 | 67848857 | 67858122 | Rat |
| 1562742 | RGD1562742 | similar to MAP/microtubule affinity-regulating kinase 4 (MAP/microtubule affinity-regulating kinase like 1) | 17 | 67881834 | 67925392 | Rat |
| 1594794 | LOC689258 | similar to Serine/threonine-protein kinase MARK1 (MAP/microtubule affinity-regulating kinase 1) | 17 | 67934880 | 67977680 | Rat |
| 1594766 | LOC689287 | similar to MAP/microtubule affinity-regulating kinase 3 | 17 | 67970675 | 67979696 | Rat |
| 1561493 | RGD1561493 | similar to MAP/microtubule affinity-regulating kinase 4 (MAP/microtubule affinity-regulating kinase like 1) | 17 | 68034932 | 68053489 | Rat |
| 1561546 | RGD1561546 | similar to serine/threonine kinase | 17 | 68091251 | 68094180 | Rat |
| 1560221 | RGD1560221 | similar to serine/threonine kinase | 17 | 68203000 | 68230353 | Rat |
| 1593522 | LOC689342 | similar to serine/threonine kinase | 17 | 68240942 | 68253978 | Rat |
| 1593510 | LOC689354 | similar to MAP/microtubule affinity-regulating kinase 4 (MAP/microtubule affinity-regulating kinase-like 1) | 17 | 68250727 | 68253978 | Rat |
| 1593496 | LOC689368 | similar to MAP/microtubule affinity-regulating kinase 4 (MAP/microtubule affinity-regulating kinase-like 1) | 17 | 68255044 | 68299031 | Rat |
| 1593485 | LOC689379 | hypothetical protein LOC689379 | 17 | 68299169 | 68300185 | Rat |
| 2323339 | LOC100359802 | RIKEN cDNA 4921537P18-like | 17 | 68498751 | 68508861 | Rat |
| 1566097 | Anlnl1 | anillin, actin binding protein-like 1 | 17 | 68547371 | 68559629 | Rat |
| 621272 | Lgals8 | lectin, galactoside-binding, soluble, 8 | 17 | 68589595 | 68614014 | Rat |
| 1564769 | Heatr1 | HEAT repeat containing 1 | 17 | 68613162 | 68654896 | Rat |
| 1308097 | Actn2 | actinin alpha 2 | 17 | 68705160 | 68773261 | Rat |
| 621283 | Mtr | 5-methyltetrahydrofolate-homocysteine methyltransferase | 17 | 68782708 | 68867101 | Rat |
| 2323132 | LOC100359912 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5-like | 17 | 68782925 | 68851435 | Rat |
| 620314 | Ryr2 | ryanodine receptor 2, cardiac | 17 | 68959042 | 69544816 | Rat |
| 1591092 | LOC689535 | hypothetical protein LOC689535 | 17 | 69071862 | 69072182 | Rat |
| 628708 | Zp4 | zona pellucida glycoprotein 4 | 17 | 69576957 | 69583510 | Rat |
| 1589973 | LOC689605 | similar to TGF beta-inducible nuclear protein 1 (CDK105 protein) | 17 | 70364763 | 70365557 | Rat |
| 2323091 | LOC100359954 | hypothetical protein LOC100359954 | 17 | 70385467 | 70465004 | Rat |
| 2343 | Chrm3 | cholinergic receptor, muscarinic 3 | 17 | 71214906 | 71218463 | Rat |
| 1589893 | LOC689685 | hypothetical protein LOC689685 | 17 | 71296562 | 71297153 | Rat |
| 1303252 | Zmynd11 | zinc finger, MYND-type containing 11 | 17 | 71296712 | 71418778 | Rat |
| 1560155 | Dip2c | DIP2 disco-interacting protein 2 homolog C (Drosophila) | 17 | 71435930 | 71824903 | Rat |
| 1310713 | Larp4b | La ribonucleoprotein domain family, member 4B | 17 | 71931605 | 72010103 | Rat |
| 1566175 | RGD1566175 | similar to ribosomal protein Rps2 | 17 | 72069569 | 72070061 | Rat |
| 620783 | Gtpbp4 | GTP binding protein 4 | 17 | 72100899 | 72120636 | Rat |
| 1559783 | Idi2 | isopentenyl-diphosphate delta isomerase 2 | 17 | 72124491 | 72127107 | Rat |
| 1560805 | RGD1560805 | similar to isopentenyl diphosphate delta-isomerase type 2 | 17 | 72139854 | 72142398 | Rat |
| 1564347 | RGD1564347 | similar to isopentenyl diphosphate delta-isomerase type 2 | 17 | 72166281 | 72233891 | Rat |
| 1587565 | Idi2l | isopentenyl-diphosphate delta isomerase 2-like | 17 | 72182749 | 72193589 | Rat |
| 1587558 | LOC689822 | similar to Nucleolar GTP-binding protein 1 (Chronic renal failure gene protein) (GTP-binding protein NGB) | 17 | 72195168 | 72215418 | Rat |
| 1587538 | LOC689842 | similar to Nucleolar GTP-binding protein 1 (Chronic renal failure gene protein) (GTP-binding protein NGB) | 17 | 72250388 | 72275245 | Rat |
| 1310647 | RGD1310647 | similar to isopentenyl diphosphate delta-isomerase type 2 | 17 | 72274978 | 72288445 | Rat |
| 1563564 | RGD1563564 | similar to GTP-binding protein NGB | 17 | 72292071 | 72325298 | Rat |
| 2322276 | LOC100360377 | hypothetical LOC100360377 | 17 | 72328948 | 72330006 | Rat |
| 1561620 | RGD1561620 | similar to isopentenyl diphosphate delta-isomerase type 2 | 17 | 72351914 | 72354384 | Rat |
| 1564999 | RGD1564999 | similar to isopentenyl-diphosphate delta isomerase 2 | 17 | 72412210 | 72417701 | Rat |
| 1589708 | LOC364765 | similar to Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma) | 17 | 72430027 | 72431314 | Rat |
| 1586380 | LOC689920 | similar to G protein-binding protein CRFG | 17 | 72451014 | 72479997 | Rat |
| 2322079 | LOC100360477 | hypothetical protein LOC100360477 | 17 | 72498155 | 72504058 | Rat |
| 1560301 | RGD1560301 | similar to isopentenyl-diphosphate delta isomerase 2 | 17 | 72528495 | 72533712 | Rat |
| 621835 | Idi1 | isopentenyl-diphosphate delta isomerase 1 | 17 | 72557196 | 72563149 | Rat |
| 1306189 | Wdr37 | WD repeat domain 37 | 17 | 72563069 | 72628890 | Rat |
| 621519 | Adarb2 | adenosine deaminase, RNA-specific, B2 | 17 | 72680982 | 73238156 | Rat |
| 2325073 | LOC100359655 | elongin B-like | 17 | 73144385 | 73144748 | Rat |
| 1585155 | Moap1-ps1 | modulator of apoptosis 1, pseudogene 1 | 17 | 74378613 | 74378840 | Rat |
| 1594362 | LOC502144 | hypothetical LOC502144 | 17 | 74609918 | 74610401 | Rat |
| 1589707 | LOC364767 | similar to minichromosome maintenance protein 7 | 17 | 74690540 | 74692767 | Rat |
| 2321688 | LOC100360669 | heat shock protein 1 (chaperonin 10) | 17 | 74696173 | 74740257 | Rat |
| 61893 | Pfkp | phosphofructokinase, platelet | 17 | 74760912 | 74823046 | Rat |
| 1310998 | Pitrm1 | pitrilysin metallopeptidase 1 | 17 | 74824700 | 74856784 | Rat |
| 1589706 | LOC364768 | similar to zinc finger, ZZ domain containing 3 | 17 | 74910432 | 74911968 | Rat |
| 1595872 | LOC307079 | similar to 60S ribosomal protein L21 | 17 | 75072335 | 75072825 | Rat |
| 1589705 | LOC364770 | similar to SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 | 17 | 75119280 | 75120535 | Rat |
| 1595871 | LOC307084 | similar to heat shock protein 8 | 17 | 75127402 | 75129301 | Rat |
| 62389 | Klf6 | Kruppel-like factor 6 | 17 | 75578498 | 75585072 | Rat |
| 2321148 | LOC100360911 | phosphoglycerate dehydrogenase | 17 | 76504353 | 76505651 | Rat |
| 1564865 | RGD1564865 | similar to 20-alpha-hydroxysteroid dehydrogenase | 17 | 76868408 | 76903914 | Rat |
| 1559604 | Akr1c12l1 | aldo-keto reductase family 1, member C12-like 1 | 17 | 76969835 | 76980344 | Rat |
| 1589704 | LOC364772 | similar to Voltage-dependent anion-selective channel protein 1 (VDAC-1) (mVDAC1) (mVDAC5) (Outer mitochondrial membrane protein porin 1) (Plasmalemmal porin) | 17 | 76986683 | 76989041 | Rat |
| 1309599 | Akr1e2 | aldo-keto reductase family 1, member E2 | 17 | 77011336 | 77025824 | Rat |
| 1311841 | Akr1c2 | aldo-keto reductase family 1, member C2 | 17 | 77034737 | 77081406 | Rat |
| 1306847 | Akr1c1 | aldo-keto reductase family 1, member C1 | 17 | 77084306 | 77112994 | Rat |
| 1308232 | Akr1c13 | aldo-keto reductase family 1, member C13 | 17 | 77142941 | 77155823 | Rat |
| 2320945 | LOC100361015 | hypothetical protein LOC100361015 | 17 | 77156717 | 77165731 | Rat |
| 1562954 | Akr1c19 | aldo-keto reductase family 1, member C19 | 17 | 77162221 | 77183258 | Rat |
| 1359406 | Akr1c12 | aldo-keto reductase family 1, member C12 | 17 | 77203587 | 77219705 | Rat |
| 2320903 | LOC100361057 | solute carrier family 23 member 2-like | 17 | 77234848 | 77242985 | Rat |
| 708428 | Akr1c3 | aldo-keto reductase family 1, member C3 | 17 | 77269626 | 77286521 | Rat |
| 708361 | Akr1c14 | aldo-keto reductase family 1, member C14 | 17 | 77316456 | 77332903 | Rat |
| 1307514 | Akr1cl | aldo-keto reductase family 1, member C-like | 17 | 77341133 | 77367689 | Rat |
| 1562213 | Ucn3 | urocortin 3 | 17 | 77482852 | 77488471 | Rat |
| 1305289 | Tubal3 | tubulin, alpha-like 3 | 17 | 77496632 | 77505317 | Rat |
| 1305034 | Net1 | neuroepithelial cell transforming 1 | 17 | 77533225 | 77543337 | Rat |
| 1310047 | Calml5 | calmodulin-like 5 | 17 | 77567314 | 77571711 | Rat |
| 1305499 | Calml3 | calmodulin-like 3 | 17 | 77594514 | 77595889 | Rat |
| 1582824 | LOC690290 | similar to Saccharomyces cerevisiae Nip7p homolog | 17 | 77701086 | 77701627 | Rat |
| 1564088 | Rpl29-ps3 | ribosomal protein L29, pseudogene 3 | 17 | 77746873 | 77747340 | Rat |
| 1310387 | Asb13 | ankyrin repeat and SOCS box-containing 13 | 17 | 77759058 | 77777760 | Rat |
| 1564456 | Fam208b | family with sequence similarity 208, member B | 17 | 77806664 | 77842055 | Rat |
| 61802 | Gdi2 | GDP dissociation inhibitor 2 | 17 | 77843481 | 77870171 | Rat |
| 1311405 | Ankrd16 | ankyrin repeat domain 16 | 17 | 77930658 | 77943867 | Rat |
| 1306298 | Fbxo18 | F-box protein, helicase, 18 | 17 | 77945025 | 77982314 | Rat |
| 1305149 | Il15ra | interleukin 15 receptor, alpha | 17 | 77998621 | 78029657 | Rat |
| 2320519 | LOC100361244 | actin related protein 2/3 complex subunit 5-like | 17 | 78035001 | 78036170 | Rat |
| 2895 | Il2ra | interleukin 2 receptor, alpha | 17 | 78050491 | 78097802 | Rat |
| 2320465 | LOC100361298 | proteasome 26S ATPase subunit 6-like | 17 | 78130595 | 78135235 | Rat |
| 1311208 | Rbm17 | RNA binding motif protein 17 | 17 | 78139912 | 78156805 | Rat |
| 619776 | Pfkfb3 | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 | 17 | 78241182 | 78268272 | Rat |
| 620968 | Prkcq | protein kinase C, theta | 17 | 78486998 | 78566741 | Rat |
| 1564416 | RGD1564416 | similar to Heterogeneous nuclear ribonucleoprotein A1 (Helix-destabilizing protein (Topoisomerase-inhibitor suppressed) | 17 | 78698992 | 78699714 | Rat |
| 1594735 | LOC690519 | similar to ATP synthase gamma chain, mitochondrial precursor | 17 | 78841565 | 78843118 | Rat |
| 2322093 | LOC100360463 | hypothetical LOC100360463 | 17 | 78870019 | 78875455 | Rat |
| 2321948 | LOC100360509 | protein arginine methyltransferase 1-like | 17 | 78879232 | 78880154 | Rat |
| 2321902 | LOC100360555 | Fth1 protein-like | 17 | 79115931 | 79116631 | Rat |
| 1305027 | Sfmbt2 | Scm-like with four mbt domains 2 | 17 | 79200904 | 79378766 | Rat |
| 1565426 | LOC498793 | similar to inter-alpha-inhibitor H2 chain | 17 | 79688702 | 79726869 | Rat |
| 1596107 | Kin | antigenic determinant of rec-A protein homolog (mouse) | 17 | 79728511 | 79738856 | Rat |
| 620011 | Atp5c1 | ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 | 17 | 79738999 | 79761176 | Rat |
| 2324594 | Taf3 | TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa | 17 | 79770612 | 79946159 | Rat |
| 621250 | Gata3 | GATA binding protein 3 | 17 | 79991587 | 80011574 | Rat |
| 1593383 | LOC690692 | hypothetical protein LOC690692 | 17 | 80052212 | 80107478 | Rat |
| 1563247 | RGD1563247 | similar to At1g76010/T4O12_22 | 17 | 80130858 | 80131223 | Rat |
| 631497 | Bp98 | Blood pressure QTL 98 | 3.66 | | Blood pressure | systolic | 17 | 46994933 | 71214857 | Rat |
| 631502 | Cm26 | Cardiac mass QTL 26 | 3.71 | | Cardiac mass | left ventricle | 17 | 76829512 | 92594341 | Rat |
| 1354596 | Bw32 | Body weight QTL 32 | 4.5 | | Body weight | | 17 | 9988620 | 71570057 | Rat |
| 61466 | Niddm12 | Non-insulin dependent diabetes mellitus QTL 12 | 3.2 | .001 | Glucose level | fasting | 17 | 60586065 | 71214851 | Rat |
| 61394 | Bp8 | Blood pressure QTL 8 | 2.2 | | Blood pressure | salt-loaded systolic | 17 | 28967654 | 70289047 | Rat |
| 724528 | Uae4 | Urinary albumin excretion QTL 4 | 4.9 | .0001 | Renal function | urine albumin level | 17 | 42344830 | 81039660 | Rat |
| 724549 | Niddm56 | Non-insulin dependent diabetes mellitus QTL 56 | | .03 | Glucose level | | 17 | 38353858 | 83353858 | Rat |
| 70210 | Cm15 | Cardiac mass QTL 15 | 6.5 | | Cardiac mass | right ventricle | 17 | 65900398 | 81612488 | Rat |
| 1300148 | Bp192 | Blood pressure QTL 192 | 3.47 | | Blood pressure | salt-loaded time series calculation | 17 | 41028379 | 85072478 | Rat |
| 1300131 | Bp193 | Blood pressure QTL 193 | 3.3 | | Blood pressure | salt-loaded mean arterial | 17 | 74663818 | 85072478 | Rat |
| 1354581 | Bp247 | Blood pressure QTL 247 | 4.5 | | Blood pressure | pulse pressure | 17 | 1 | 81039660 | Rat |
| 1354588 | Bvd4 | Brain ventricular dilatation QTL 4 | 5.31 | .001 | Head/brain development | brain ventricular dilatation | 17 | 62026925 | 93930006 | Rat |
| 1354663 | Bvd5 | Brain ventricular dilatation QTL 5 | 3.54 | .001 | Head/brain development | brain ventricular dilatation | 17 | 38353858 | 92741218 | Rat |
| 1354619 | Bp242 | Blood pressure QTL 242 | 6.3 | | Blood pressure | systolic | 17 | 47055924 | 81039660 | Rat |
| 1354662 | Rf49 | Renal function QTL 49 | 2.9 | | Creatinine level | serum | 17 | 1 | 81039660 | Rat |
| 1354630 | Cm34 | Cardiac mass QTL 34 | 8.7 | | Cardiac mass | left ventricle | 17 | 9988620 | 81039660 | Rat |
| 1358295 | Aocep1 | Aortic cell protein QTL 1 | 6.1 | .00000071 | Protein level | aortic cell percentage | 17 | 51995423 | 96995423 | Rat |
| 1354635 | Bp245 | Blood pressure QTL 245 | 6 | | Blood pressure | mean arterial | 17 | 36039660 | 81039660 | Rat |
| 1354651 | Lmblg2 | Limb length QTL 2 | 6 | | Limb morphology | tibia length | 17 | 9988620 | 81039660 | Rat |
| 1354638 | Insul1 | Insulin level QTL 1 | 4.8 | | Insulin level | serum | 17 | 9988620 | 81039660 | Rat |
| 1354640 | Scl32 | Serum cholesterol level QTL 32 | 5.4 | | Lipid level | HDL cholesterol | 17 | 26570057 | 71570057 | Rat |
| 1354654 | Spl7 | Serum phospholipid level QTL 7 | 5.5 | | Lipid level | serum phospholipids | 17 | 26570057 | 71570057 | Rat |
| 1354658 | Spl8 | Serum phospholipid level QTL 8 | 3.8 | | Lipid level | serum phospholipids | 17 | 1 | 71570057 | Rat |
| 1354659 | Spl6 | Serum phospholipid level QTL 6 | 3.9 | | Lipid level | VLDL | 17 | 26570057 | 71570057 | Rat |
| 1354628 | Stl13 | Serum triglyceride level QTL 13 | 3.8 | | Lipid level | total triglycerides | 17 | 27118351 | 71570057 | Rat |
| 1354629 | Scl31 | Serum cholesterol level QTL 31 | 4.1 | | Lipid level | serum cholesterol | 17 | 26570057 | 71570057 | Rat |
| 1559055 | Bp278 | Blood pressure QTL 278 | | .04 | Blood pressure | mean arterial | 17 | 38257371 | 73041111 | Rat |
| 1598871 | Memor5 | Memory QTL 5 | 5.3 | | Memory | navigation-spatial | 17 | 47628673 | 94800809 | Rat |
| 1581509 | Cm57 | Cardiac mass QTL 57 | 4.5 | .05 | Cardiac mass | left ventricle | 17 | 70094251 | 97296363 | Rat |
| 1600398 | Edcs5 | Endometrial carcinoma susceptibility QTL 5 | 2.2 | | Endometrial tumor susceptibility | | 17 | 65900398 | 82125463 | Rat |
| 2302365 | Gluco40 | Glucose level QTL 40 | 4.79 | | Glucose level | | 17 | 65900518 | 93489534 | Rat |
| 2303580 | Gluco49 | Glucose level QTL 49 | 2 | | Glucose level | post-restraint | 17 | 61100283 | 97296363 | Rat |
| 2301412 | Kidm40 | Kidney mass QTL 40 | | .001 | Kidney mass | | 17 | 80181988 | 89018862 | Rat |
| 2317045 | Aia11 | Adjuvant induced arthritis QTL 11 | 4.06 | | Joint/bone inflammation | adjuvant induced | 17 | 71569891 | 77806121 | Rat |
| 2317053 | Aia25 | Adjuvant induced arthritis QTL 25 | 2.69 | | Joint/bone inflammation | adjuvant induced | 17 | 59104944 | 71569891 | Rat |
| 2317060 | Aia26 | Adjuvant induced arthritis QTL 26 | 3.22 | | Joint/bone inflammation | adjuvant induced | 17 | 49069974 | 94069974 | Rat |
| 2317054 | Aia12 | Adjuvant induced arthritis QTL 12 | 4.24 | | Joint/bone inflammation | adjuvant induced | 17 | 49069974 | 94069974 | Rat |
| 2317038 | Ginf3 | Gastrointestinal inflammation QTL 3 | 2.89 | .005 | Gastrointestinal inflammation | | 17 | 60979997 | 97296363 | Rat |
| 2324621 | Coatc5 | Coat color QTL 5 | | | Coat color | hooded | 17 | 37727971 | 85072478 | Rat |
| 4889955 | Bss93 | Bone structure and strength QTL 93 | 4.4 | | Bone structure | | 17 | 33277173 | 71214857 | Rat |
| 4889894 | Eae33 | Experimental allergic encephalomyelitis QTL 33 | 5.2 | .0001 | Brain/spinal cord inflammation | maximum Eae score | 17 | 59104847 | 66993271 | Rat |