Insul30 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Insul30 (Insulin level QTL 30) Rattus norvegicus

Symbol: Insul30
Name: Insulin level QTL 30
RGD ID: 9589151
Trait: blood insulin amount   (VT:0001560)    
Measurement Type: plasma insulin level   (CMO:0000342)    
LOD Score: 8.82
P Value: 0.001
Variance: 8.4
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_5.01716,409,641 - 61,409,641RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41719,150,649 - 64,150,649RGD_MAPPER_PIPELINERGSC3.4
Cross Type: intercross
Strains Crossed: F344/IcoCrlf LOU/NimrOlaHsd 



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
# Reference Title Reference Citation
1. Quantitative Trait Loci Influencing Abdominal Fat Deposition and Functional Variability of the HPA Axis in the Rat. Marissal-Arvy N, etal., Horm Metab Res. 2014 Jul 8.

Region

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
Position Markers

Peak: (D17Rat118)
Rat AssemblyChrPosition (strand)Source
Rnor_5.01738,909,435 - 38,909,847NCBI
RGSC_v3.41741,650,444 - 41,650,855RGD
RGSC_v3.11741,653,285 - 41,653,696RGD
RH 3.4 Map17391.8UniSTS
RH 3.4 Map17391.8RGD
RH 2.0 Map17285.9RGD
SHRSP x BN Map1728.1999RGD


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general confidence interval 53.8-64.2 Mb 8694157
qtl_general number of animals used: 93 F2 males and 94 F2 females 8694157
qtl_general measurement method: at the end of the HPA axis function experiment, animals were fasted overnight, blood samples collected on EDTA, centrifuged at 4000g, plasma extracted and plasma insulin level measured in triplicate with RIA kit (Insik 5, DiaSorin SA, Antony, France) 8694157
qtl_general software package used: MultiQTL software 8694157
qtl_general an additional peak at D17Rat43 with confidence interval 64.5-94 Mb was observed 8694157