Gnb2 (G protein subunit beta 2) - Rat Genome Database

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Pathways
Gene: Gnb2 (G protein subunit beta 2) Rattus norvegicus
Analyze
Symbol: Gnb2
Name: G protein subunit beta 2
RGD ID: 69319
Description: Enables calcium channel regulator activity. Predicted to be involved in G protein-coupled receptor signaling pathway and regulation of potassium ion transmembrane transport. Located in cell body. Part of protein-containing complex. Is active in parallel fiber to Purkinje cell synapse and synaptic vesicle membrane. Orthologous to human GNB2 (G protein subunit beta 2); PARTICIPATES IN chemokine mediated signaling pathway; glutamate signaling pathway; INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-sulfonyldiphenol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: g protein subunit beta-2; guanine nucleotide binding protein (G protein), beta 2; guanine nucleotide binding protein (G protein), beta polypeptide 2; guanine nucleotide binding protein beta 2; guanine nucleotide binding protein beta 2 subunit; guanine nucleotide binding protein, beta 2; guanine nucleotide binding protein, beta polypeptide 2; guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2; guanine nucleotide-binding protein, beta 2; heterotrimeric guanine nucleotide-binding protein 2c1; Hg2c1; transducin beta chain 2
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81224,795,505 - 24,800,796 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1224,795,827 - 24,800,796 (+)EnsemblGRCr8
mRatBN7.21219,159,002 - 19,164,021 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1219,158,973 - 19,164,019 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1220,315,269 - 20,320,289 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01220,928,193 - 20,933,213 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01219,992,543 - 19,997,563 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01222,229,079 - 22,234,096 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1222,229,079 - 22,234,096 (+)Ensemblrn6Rnor6.0
Rnor_5.01224,245,847 - 24,250,864 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41219,597,312 - 19,602,329 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1220,964,068 - 20,969,085 (+)NCBICelera
RGSC_v3.11219,586,873 - 19,591,891 (-)NCBI
Cytogenetic Map12q12NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(R)-adrenaline  (ISO)
1,2-dimethylhydrazine  (ISO)
17beta-estradiol  (EXP)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,6-dimethoxyphenol  (ISO)
3,4-methylenedioxymethamphetamine  (ISO)
4,4'-sulfonyldiphenol  (EXP,ISO)
4-hydroxynon-2-enal  (ISO)
5-fluorouracil  (ISO)
acetylsalicylic acid  (ISO)
acrolein  (ISO)
all-trans-retinoic acid  (ISO)
alpha-pinene  (ISO)
ammonium chloride  (EXP)
arsenite(3-)  (ISO)
atrazine  (ISO)
barium(0)  (ISO)
bis(2-ethylhexyl) phthalate  (EXP,ISO)
bisphenol A  (EXP,ISO)
bisphenol AF  (ISO)
bisphenol F  (EXP,ISO)
C60 fullerene  (EXP)
cadmium dichloride  (ISO)
cannabidiol  (EXP)
chlorpyrifos  (ISO)
choline  (ISO)
clobetasol  (ISO)
clofibrate  (ISO)
cocaine  (EXP)
dibenzo[a,l]pyrene  (ISO)
diethylstilbestrol  (EXP)
dioxygen  (ISO)
elemental selenium  (ISO)
ethanol  (EXP,ISO)
ethyl methanesulfonate  (ISO)
fenvalerate  (EXP)
fluoxetine  (ISO)
folic acid  (ISO)
FR900359  (ISO)
furfural  (ISO)
gefitinib  (ISO)
genistein  (ISO)
hyaluronic acid  (EXP)
hydrogen peroxide  (EXP,ISO)
hypochlorous acid  (ISO)
ivermectin  (ISO)
L-methionine  (ISO)
lidocaine  (EXP)
methamphetamine  (EXP)
nickel atom  (ISO)
nickel sulfate  (ISO)
nitrates  (ISO)
Nor-9-carboxy-delta9-THC  (ISO)
ozone  (ISO)
paracetamol  (ISO)
potassium dichromate  (ISO)
rotenone  (EXP)
SB 431542  (ISO)
selenium atom  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
sodium chloride  (ISO)
sodium fluoride  (ISO)
titanium dioxide  (ISO)
trichloroethene  (EXP)
triphenyl phosphate  (ISO)
triptonide  (ISO)
undecane  (EXP)
valproic acid  (ISO)
vinclozolin  (EXP)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Differential modulation of N-type 1B and P/Q-type 1A calcium channels by different G protein subunit isoforms. Arnot MI, etal., J Physiol 2000 Sep 1;527 Pt 2:203-12.
2. Distribution of heterotrimeric G-protein beta and gamma subunits in the rat brain. Betty M, etal., Neuroscience 1998 Jul;85(2):475-86.
3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
4. KEGG: Kyoto Encyclopedia of Genes and Genomes KEGG
5. Immunohistochemical localization of G protein beta1, beta2, beta3, beta4, beta5, and gamma3 subunits in the adult rat brain. Liang JJ, etal., J Neurochem. 1998 Jul;71(1):345-55.
6. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
7. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
8. Functional G-protein heterotrimers are associated with vesicles of putative glutamatergic terminals: implications for regulation of transmitter uptake. Pahner I, etal., Mol Cell Neurosci. 2003 Jul;23(3):398-413. doi: 10.1016/s1044-7431(03)00059-9.
9. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
10. GOA pipeline RGD automated data pipeline
11. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
12. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
13. Gbetagamma that interacts with adenylyl cyclase in opioid tolerance originates from a Gs protein. Wang HY and Burns LH, J Neurobiol. 2006 Oct;66(12):1302-10.
Additional References at PubMed
PMID:15489334   PMID:16498633   PMID:16502470   PMID:17634366   PMID:17897319   PMID:19190083   PMID:19199708   PMID:19255495   PMID:19946888   PMID:20458337   PMID:21423176   PMID:21633701  
PMID:22120110   PMID:22711958   PMID:22905384   PMID:23209302   PMID:23376485   PMID:23533145   PMID:24513289   PMID:24625528   PMID:28131823   PMID:35352799   PMID:35659652  


Genomics

Comparative Map Data
Gnb2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81224,795,505 - 24,800,796 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1224,795,827 - 24,800,796 (+)EnsemblGRCr8
mRatBN7.21219,159,002 - 19,164,021 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1219,158,973 - 19,164,019 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1220,315,269 - 20,320,289 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01220,928,193 - 20,933,213 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01219,992,543 - 19,997,563 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01222,229,079 - 22,234,096 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1222,229,079 - 22,234,096 (+)Ensemblrn6Rnor6.0
Rnor_5.01224,245,847 - 24,250,864 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41219,597,312 - 19,602,329 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1220,964,068 - 20,969,085 (+)NCBICelera
RGSC_v3.11219,586,873 - 19,591,891 (-)NCBI
Cytogenetic Map12q12NCBI
GNB2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387100,673,740 - 100,679,169 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7100,673,567 - 100,679,174 (+)Ensemblhg38GRCh38
GRCh377100,271,363 - 100,276,792 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 367100,109,311 - 100,114,728 (+)NCBIBuild 36Build 36hg18NCBI36
Build 34799,916,025 - 99,921,442NCBI
Celera795,001,927 - 95,007,353 (+)NCBICelera
Cytogenetic Map7q22.1NCBI
HuRef794,902,070 - 94,907,496 (+)NCBIHuRef
CHM1_17100,201,871 - 100,207,297 (+)NCBICHM1_1
T2T-CHM13v2.07101,913,819 - 101,919,248 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v2799,630,968 - 99,636,397 (+)NCBI
Gnb2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395137,526,389 - 137,533,085 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5137,526,389 - 137,531,772 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm385137,528,127 - 137,533,449 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5137,528,127 - 137,533,510 (-)Ensemblmm10GRCm38
MGSCv375137,969,357 - 137,974,457 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv365137,757,917 - 137,763,017 (-)NCBIMGSCv36mm8
Celera5134,511,768 - 134,516,867 (-)NCBICelera
Cytogenetic Map5G2NCBI
cM Map576.54NCBI
Gnb2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955573241,854 - 247,849 (-)Ensembl
ChiLan1.0NW_004955573242,815 - 247,740 (-)NCBIChiLan1.0ChiLan1.0
GNB2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26118,585,659 - 118,591,092 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan17166,850,298 - 166,855,723 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0792,700,807 - 92,706,211 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17106,104,339 - 106,107,270 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7106,104,339 - 106,107,270 (+)EnsemblpanPan2panpan1.1
GNB2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.169,032,536 - 9,037,734 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl69,032,811 - 9,037,668 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha610,736,967 - 10,742,162 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.068,966,708 - 8,971,903 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl68,966,710 - 8,971,917 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.168,819,250 - 8,824,439 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.068,796,973 - 8,802,181 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.068,979,149 - 8,984,345 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Gnb2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344133,326,473 - 133,329,113 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936543706,505 - 714,462 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936543706,505 - 710,057 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GNB2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl38,579,122 - 8,584,266 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.138,579,037 - 8,585,268 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.237,974,039 - 7,979,398 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GNB2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12812,533,667 - 12,539,060 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2812,533,659 - 12,536,570 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_0236660703,766,511 - 3,772,471 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gnb2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474016,419,165 - 16,424,935 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462474016,421,372 - 16,426,408 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Gnb2
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11616,485,254 - 16,490,298 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Gnb2
44 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:88
Count of miRNA genes:60
Interacting mature miRNAs:77
Transcripts:ENSRNOT00000001911
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2312418Kidm41Kidney mass QTL 413.70.0001kidney mass (VT:0002707)single kidney wet weight to body weight ratio (CMO:0000622)12592191825247790Rat
61443Btemp2Thermal response to stress QTL 23.30.000094body temperature trait (VT:0005535)core body temperature (CMO:0001036)122013902826430640Rat
70213Niddm27Non-insulin dependent diabetes mellitus QTL 273.72blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)121120049452308831Rat
2306789Ean6Experimental allergic neuritis QTL 64.9nervous system integrity trait (VT:0010566)experimental autoimmune neuritis severity score (CMO:0001528)12129775522Rat
8552964Pigfal17Plasma insulin-like growth factor 1 level QTL 173.5blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)121120049452308831Rat
7411641Foco19Food consumption QTL 1927.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)121120049452308831Rat
5684888Pia42Pristane induced arthritis QTL 42joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)12348941648489416Rat
1331739Hrtrt14Heart rate QTL 143.56232heart pumping trait (VT:2000009)heart rate (CMO:0000002)12138687564Rat
1641928Alcrsp5Alcohol response QTL 5response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)121847304152308831Rat
8552912Pigfal6Plasma insulin-like growth factor 1 level QTL 65blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)121120049752308831Rat
1549829Scl48Serum cholesterol level QTL 485blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)121526424852308831Rat
61331Eau2Experimental allergic uveoretinitis QTL 20.0005uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)12133700600Rat
10059594Kidm46Kidney mass QTL 463.790.025kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)121174352852308831Rat
8552918Pigfal7Plasma insulin-like growth factor 1 level QTL 7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)121120049452308831Rat
2293684Bmd26Bone mineral density QTL 264.40.0002femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)12138635130Rat
6893681Bw109Body weight QTL 1092.30.004body mass (VT:0001259)body weight (CMO:0000012)12128133365Rat
1302792Scl21Serum cholesterol level QTL 213.80.0011blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)121223300030490641Rat
61404Bw120Body weight QTL 1205.1body mass (VT:0001259)body mass index (BMI) (CMO:0000105)121746497946784661Rat
1300174Bw15Body weight QTL 152.93body mass (VT:0001259)body weight loss (CMO:0001399)12128606299Rat
1331786Kidm11Kidney mass QTL 113.571kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)121618743852308831Rat
1331787Rf41Renal function QTL 412.998kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)12133700556Rat
2293699Bss49Bone structure and strength QTL 495.610.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)121613502952308831Rat
1331761Bp218Blood pressure QTL 2182.973arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)121618743851213550Rat
1331763Wbc2White blood cell count QTL 23.162leukocyte quantity (VT:0000217)total white blood cell count (CMO:0000365)121120049452308831Rat
61416Pia4Pristane induced arthritis QTL 48.4joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)121874946936488809Rat
7204484Bp358Blood pressure QTL 3580.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)12124849755Rat
7411547Bw129Body weight QTL 1290.001body mass (VT:0001259)body weight gain (CMO:0000420)61120049452308831Rat
7387292Kidm42Kidney mass QTL 423.030.0004kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)12141361854Rat
61421Cia12Collagen induced arthritis QTL 124.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)121874946934312613Rat
1298081Cia25Collagen induced arthritis QTL 254.7joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)12274769447747694Rat
2303569Gluco44Glucose level QTL 442blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)121847304152308831Rat
2303568Bw88Body weight QTL 883body mass (VT:0001259)body weight (CMO:0000012)12128606299Rat
2303575Insul14Insulin level QTL 144blood insulin amount (VT:0001560)blood insulin level (CMO:0000349)12308718048087180Rat
7411588Foco6Food consumption QTL 60.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)121120049452308831Rat
7243862Mcs30Mammary carcinoma susceptibility QTL 308.62mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)12563330650633306Rat
2300186Bmd59Bone mineral density QTL 597.10.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)121613502952308831Rat
2293086Iddm30Insulin dependent diabetes mellitus QTL 303.82blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)12790162533938215Rat
7411597Foco10Food consumption QTL 100.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)121120049452308831Rat
1331755Bp219Blood pressure QTL 2193.041arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)121618743833700556Rat

Markers in Region
Gnb2  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81224,799,759 - 24,800,236 (+)Marker Load Pipeline
mRatBN7.21219,162,982 - 19,163,459 (+)MAPPERmRatBN7.2
Rnor_6.01222,233,060 - 22,233,536NCBIRnor6.0
Rnor_5.01224,249,828 - 24,250,304UniSTSRnor5.0
RGSC_v3.41219,597,872 - 19,598,348UniSTSRGSC3.4
Celera1220,968,049 - 20,968,525UniSTS
Cytogenetic Map12q12UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 163 91 90 59 92 59 6 356 192 11 142 81 92 31 17 17

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_031037 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039089799 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039089800 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039089801 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063271695 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF022084 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF277892 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF397193 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC065579 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473973 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ120485 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ120486 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  OU667101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U34959 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000001911   ⟹   ENSRNOP00000001911
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1224,795,827 - 24,800,795 (+)Ensembl
mRatBN7.2 Ensembl1219,158,973 - 19,164,017 (+)Ensembl
Rnor_6.0 Ensembl1222,229,079 - 22,234,096 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000097367   ⟹   ENSRNOP00000079960
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1224,798,360 - 24,800,796 (+)Ensembl
mRatBN7.2 Ensembl1219,160,627 - 19,164,019 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000099940   ⟹   ENSRNOP00000079986
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1219,159,032 - 19,164,019 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000100577   ⟹   ENSRNOP00000078220
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1224,795,827 - 24,800,795 (+)Ensembl
mRatBN7.2 Ensembl1219,158,973 - 19,164,017 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000116394   ⟹   ENSRNOP00000097429
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1224,795,827 - 24,800,795 (+)Ensembl
mRatBN7.2 Ensembl1219,158,973 - 19,164,017 (+)Ensembl
RefSeq Acc Id: NM_031037   ⟹   NP_112299
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81224,795,779 - 24,800,796 (+)NCBI
mRatBN7.21219,159,002 - 19,164,019 (+)NCBI
Rnor_6.01222,229,079 - 22,234,096 (+)NCBI
Rnor_5.01224,245,847 - 24,250,864 (+)NCBI
RGSC_v3.41219,597,312 - 19,602,329 (-)RGD
Celera1220,964,068 - 20,969,085 (+)RGD
Sequence:
RefSeq Acc Id: XM_039089799   ⟹   XP_038945727
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81224,796,816 - 24,800,796 (+)NCBI
mRatBN7.21219,159,965 - 19,164,021 (+)NCBI
RefSeq Acc Id: XM_039089800   ⟹   XP_038945728
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81224,795,505 - 24,800,796 (+)NCBI
mRatBN7.21219,159,909 - 19,164,021 (+)NCBI
RefSeq Acc Id: XM_039089801   ⟹   XP_038945729
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81224,797,570 - 24,800,796 (+)NCBI
mRatBN7.21219,160,796 - 19,164,021 (+)NCBI
RefSeq Acc Id: XM_063271695   ⟹   XP_063127765
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81224,795,505 - 24,800,796 (+)NCBI
RefSeq Acc Id: NP_112299   ⟸   NM_031037
- UniProtKB: Q71SU9 (UniProtKB/Swiss-Prot),   P54313 (UniProtKB/Swiss-Prot),   A6J023 (UniProtKB/TrEMBL),   Q45QL6 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000001911   ⟸   ENSRNOT00000001911
RefSeq Acc Id: XP_038945728   ⟸   XM_039089800
- Peptide Label: isoform X1
- UniProtKB: P54313 (UniProtKB/Swiss-Prot),   Q71SU9 (UniProtKB/Swiss-Prot),   A6J023 (UniProtKB/TrEMBL),   Q45QL6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038945727   ⟸   XM_039089799
- Peptide Label: isoform X1
- UniProtKB: P54313 (UniProtKB/Swiss-Prot),   Q71SU9 (UniProtKB/Swiss-Prot),   A6J023 (UniProtKB/TrEMBL),   Q45QL6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038945729   ⟸   XM_039089801
- Peptide Label: isoform X1
- UniProtKB: P54313 (UniProtKB/Swiss-Prot),   Q71SU9 (UniProtKB/Swiss-Prot),   A6J023 (UniProtKB/TrEMBL),   Q45QL6 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000079986   ⟸   ENSRNOT00000099940
Ensembl Acc Id: ENSRNOP00000078220   ⟸   ENSRNOT00000100577
Ensembl Acc Id: ENSRNOP00000079960   ⟸   ENSRNOT00000097367
Ensembl Acc Id: ENSRNOP00000097429   ⟸   ENSRNOT00000116394
RefSeq Acc Id: XP_063127765   ⟸   XM_063271695
- Peptide Label: isoform X1
- UniProtKB: Q71SU9 (UniProtKB/Swiss-Prot),   P54313 (UniProtKB/Swiss-Prot),   A6J023 (UniProtKB/TrEMBL),   Q45QL6 (UniProtKB/TrEMBL)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P54313-F1-model_v2 AlphaFold P54313 1-340 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13698518
Promoter ID:EPDNEW_R9043
Type:initiation region
Name:Gnb2_1
Description:G protein subunit beta 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01222,229,129 - 22,229,189EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:69319 AgrOrtholog
BioCyc Gene G2FUF-19705 BioCyc
Ensembl Genes ENSRNOG00000001409 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000001911 ENTREZGENE
  ENSRNOT00000001911.5 UniProtKB/Swiss-Prot
  ENSRNOT00000097367 ENTREZGENE
Gene3D-CATH 2.130.10.10 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:5598923 IMAGE-MGC_LOAD
InterPro G-protein_beta_WD-40_rep UniProtKB/Swiss-Prot
  Gprotein_B UniProtKB/Swiss-Prot
  Guanine_nucleotide-bd_bsu UniProtKB/Swiss-Prot
  WD40/YVTN_repeat-like_dom_sf UniProtKB/Swiss-Prot
  WD40_repeat UniProtKB/Swiss-Prot
  WD40_repeat_CS UniProtKB/Swiss-Prot
  WD40_repeat_dom_sf UniProtKB/Swiss-Prot
KEGG Report rno:81667 UniProtKB/Swiss-Prot
MGC_CLONE MGC:72266 IMAGE-MGC_LOAD
NCBI Gene 81667 ENTREZGENE
PANTHER PTHR19850 UniProtKB/Swiss-Prot
Pfam WD40_Gbeta UniProtKB/Swiss-Prot
PhenoGen Gnb2 PhenoGen
PIRSF GN-bd_beta UniProtKB/Swiss-Prot
PRINTS GPROTEINB UniProtKB/Swiss-Prot
  GPROTEINBRPT UniProtKB/Swiss-Prot
PROSITE WD_REPEATS_1 UniProtKB/Swiss-Prot
  WD_REPEATS_2 UniProtKB/Swiss-Prot
  WD_REPEATS_REGION UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000001409 RatGTEx
SMART WD40 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF50978 UniProtKB/Swiss-Prot
UniProt A0A8I5Y9Z8_RAT UniProtKB/TrEMBL
  A0A8I5ZP07_RAT UniProtKB/TrEMBL
  A0A8I6B5S0_RAT UniProtKB/TrEMBL
  A6J023 ENTREZGENE, UniProtKB/TrEMBL
  GBB2_RAT UniProtKB/Swiss-Prot, ENTREZGENE
  Q45QL6 ENTREZGENE, UniProtKB/TrEMBL
  Q71SU9 ENTREZGENE
UniProt Secondary Q71SU9 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-03-15 Gnb2  G protein subunit beta 2  Gnb2  guanine nucleotide binding protein (G protein), beta polypeptide 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-09-26 Gnb2  guanine nucleotide binding protein (G protein), beta polypeptide 2  Gnb2  guanine nucleotide binding protein (G protein), beta 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-05-20 Gnb2  guanine nucleotide binding protein (G protein), beta 2  Gnb2  guanine nucleotide binding protein, beta 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-02-18 Gnb2  guanine nucleotide binding protein, beta 2  Gnb2  guanine nucleotide binding protein, beta polypeptide 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2002-06-10 Gnb2  guanine nucleotide binding protein, beta polypeptide 2      Name updated 70584 APPROVED

RGD Curation Notes
Note Type Note Reference