Advanced Search (OLGA)

Gene: Agap2 (ArfGAP with GTPase domain, ankyrin repeat and PH domain 2) Rattus norvegicus

Analyze

Symbol:

Agap2

Name:

ArfGAP with GTPase domain, ankyrin repeat and PH domain 2

RGD ID:

628844

Description:

Enables ionotropic glutamate receptor binding activity; protein kinase activator activity; and protein kinase binding activity. Involved in several processes, including cellular response to glycine; negative regulation of apoptotic process; and positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction. Located in dendrite and external side of plasma membrane. Human ortholog(s) of this gene implicated in prostate cancer. Orthologous to human AGAP2 (ArfGAP with GTPase domain, ankyrin repeat and PH domain 2); PARTICIPATES IN endocytosis pathway; INTERACTS WITH 1,2-dimethylhydrazine; 17beta-estradiol; 17beta-estradiol 3-benzoate.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

AGAP-2; arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2; centaurin, gamma 1; centaurin-gamma-1; Centg1; cnt-g1; nuclear GTPase PIKE; phosphatidylinositol 3-kinase enhancer; phosphatidylinositol-3-kinase enhancer; Pike

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	64,782,618 - 64,799,624 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	7	64,782,612 - 64,799,640 (+)	Ensembl				GRCr8
mRatBN7.2	7	62,897,282 - 62,914,295 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	62,897,282 - 62,914,295 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	7	64,791,000 - 64,803,613 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	66,993,398 - 67,006,011 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	66,794,457 - 66,807,071 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	70,360,199 - 70,377,422 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	70,364,813 - 70,377,422 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	7	70,538,136 - 70,555,124 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	7	67,031,300 - 67,043,909 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	7	60,045,054 - 60,057,649 (+)	NCBI		Celera
RGSC_v3.1	7	67,052,029 - 67,059,503 (+)	NCBI
Cytogenetic Map	7	q22	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Experimental Seizures (ISO)

Memory Disorders (ISO)

obesity (ISO)

oral squamous cell carcinoma (ISO)

prostate cancer (ISO)

type 2 diabetes mellitus (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene (ISO)

1,2-dimethylhydrazine (EXP)

17beta-estradiol (EXP)

17beta-estradiol 3-benzoate (EXP)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

2,4,4'-trichlorobiphenyl (ISO)

4,4'-sulfonyldiphenol (ISO)

acetamide (EXP)

acrylamide (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

alpha-Zearalanol (EXP)

ammonium chloride (EXP)

arsane (ISO)

arsenic atom (ISO)

atrazine (ISO)

benzo[a]pyrene (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

buta-1,3-diene (ISO)

butanal (ISO)

caffeine (ISO)

CGP 52608 (ISO)

choline (ISO)

cocaine (EXP)

Cuprizon (EXP)

decabromodiphenyl ether (EXP)

disodium selenite (ISO)

ethanol (ISO)

ethylparaben (ISO)

fipronil (EXP)

folic acid (ISO)

fulvestrant (ISO)

gentamycin (EXP)

GSK-J4 (ISO)

inulin (ISO)

L-methionine (ISO)

lead(0) (ISO)

mono(2-ethylhexyl) phthalate (ISO)

N-nitrosodiethylamine (EXP)

ozone (ISO)

paracetamol (EXP)

PCB138 (ISO)

pentanal (ISO)

perfluorooctane-1-sulfonic acid (ISO)

phenethyl caffeate (EXP)

propanal (ISO)

rifampicin (ISO)

rimonabant (ISO)

silicon dioxide (ISO)

silver atom (ISO)

silver(0) (ISO)

sodium arsenite (ISO)

tamoxifen (ISO)

testosterone (EXP)

titanium dioxide (ISO)

triphenyl phosphate (ISO)

triptonide (ISO)

valproic acid (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

actin cytoskeleton organization (ISO)

cellular response to glycine (IDA)

endosomal transport (ISO)

mammary gland alveolus development (ISO)

negative regulation of apoptotic process (IEA,ISO)

negative regulation of extrinsic apoptotic signaling pathway in absence of ligand (IMP)

negative regulation of neuron apoptotic process (IBA,IMP,ISO)

negative regulation of protein catabolic process (ISO)

phosphatidylinositol metabolic process (IMP)

positive regulation of mammary gland epithelial cell proliferation (ISO)

positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (IMP)

positive regulation of protein kinase activity (ISO)

positive regulation of protein localization to cell surface (IMP)

positive regulation of receptor signaling pathway via JAK-STAT (ISO)

positive regulation of transcription by RNA polymerase II (ISO)

Cellular Component

cytoplasm (IBA,IEA,ISO)

cytosol (ISO,TAS)

dendrite (IDA)

endosome (ISO)

external side of plasma membrane (IDA)

glutamatergic synapse (IEA,ISO)

membrane (IBA)

neuron projection (IEA)

nucleoplasm (ISO)

nucleus (IBA,IEA,ISO)

postsynapse (IEA,ISO)

Molecular Function

ATP binding (ISO)

GTP binding (IEA,ISO)

GTPase activator activity (IBA,IEA,ISO)

GTPase activity (IBA,IEA,ISO)

ionotropic glutamate receptor binding (IPI)

metal ion binding (IEA)

nucleotide binding (IEA)

phosphatidylinositol 3-kinase regulator activity (ISO)

protein binding (IPI,ISO)

protein kinase activator activity (IDA,ISO)

protein kinase binding (IDA,ISO)

protein-containing complex binding (IPI)

zinc ion binding (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

endocytosis pathway (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	GGAP2/PIKE-a directly activates both the Akt and nuclear factor-kappaB pathways and promotes prostate cancer progression.	Cai Y, etal., Cancer Res. 2009 Feb 1;69(3):819-27. doi: 10.1158/0008-5472.CAN-08-2537. Epub 2009 Jan 27.
2.	Essential role of PIKE GTPases in neuronal protection against excitotoxic insults.	Chan CB, etal., Adv Biol Regul. 2012 Jan;52(1):66-76. doi: 10.1016/j.advenzreg.2011.09.012.
3.	Deficiency of phosphoinositide 3-kinase enhancer protects mice from diet-induced obesity and insulin resistance.	Chan CB, etal., Diabetes. 2010 Apr;59(4):883-93. doi: 10.2337/db09-1404. Epub 2010 Jan 12.
4.	PIKE-mediated PI3-kinase activity is required for AMPA receptor surface expression.	Chan CB, etal., EMBO J. 2011 Aug 16;30(20):4274-86. doi: 10.1038/emboj.2011.281.
5.	Phosphoinositide 3-kinase enhancer regulates neuronal dendritogenesis and survival in neocortex.	Chan CB, etal., J Neurosci. 2011 Jun 1;31(22):8083-92. doi: 10.1523/JNEUROSCI.1129-11.2011.
6.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
7.	Reduced expression of E-cadherin and p120-catenin and elevated expression of PLC-gamma1 and PIKE are associated with aggressiveness of oral squamous cell carcinoma.	Jiang Y, etal., Int J Clin Exp Pathol. 2015 Aug 1;8(8):9042-51. eCollection 2015.
8.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
9.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
10.	GOA pipeline	RGD automated data pipeline
11.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
12.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
13.	PI3 kinase enhancer-Homer complex couples mGluRI to PI3 kinase, preventing neuronal apoptosis.	Rong R, etal., Nat Neurosci 2003 Nov;6(11):1153-61. Epub 2003 Oct 5.
14.	Netrin-1 mediates neuronal survival through PIKE-L interaction with the dependence receptor UNC5B.	Tang X, etal., Nat Cell Biol. 2008 Jun;10(6):698-706. doi: 10.1038/ncb1732. Epub 2008 May 11.
15.	Pike. A nuclear gtpase that enhances PI3kinase activity and is regulated by protein 4.1N.	Ye K, etal., Cell 2000 Dec 8;103(6):919-30.
16.	Phospholipase C gamma 1 is a physiological guanine nucleotide exchange factor for the nuclear GTPase PIKE.	Ye K, etal., Nature. 2002 Jan 31;415(6871):541-4.

Additional References at PubMed

PMID:1238857	PMID:12388557	PMID:12640130	PMID:14761976	PMID:15385964	PMID:15598747	PMID:16263930	PMID:16841086	PMID:18374643	PMID:18570454	PMID:19946888	PMID:20075866
PMID:24056044	PMID:24449917	PMID:29476059	PMID:30053369

Genomics

Comparative Map Data

Agap2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	64,782,618 - 64,799,624 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	7	64,782,612 - 64,799,640 (+)	Ensembl				GRCr8
mRatBN7.2	7	62,897,282 - 62,914,295 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	62,897,282 - 62,914,295 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	7	64,791,000 - 64,803,613 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	66,993,398 - 67,006,011 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	66,794,457 - 66,807,071 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	70,360,199 - 70,377,422 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	70,364,813 - 70,377,422 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	7	70,538,136 - 70,555,124 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	7	67,031,300 - 67,043,909 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	7	60,045,054 - 60,057,649 (+)	NCBI		Celera
RGSC_v3.1	7	67,052,029 - 67,059,503 (+)	NCBI
Cytogenetic Map	7	q22	NCBI

AGAP2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	57,723,761 - 57,742,161 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	57,723,761 - 57,742,157 (-)	Ensembl			hg38	GRCh38
GRCh37	12	58,117,544 - 58,135,944 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	56,405,261 - 56,422,207 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	12	56,405,260 - 56,422,207	NCBI
Celera	12	57,776,586 - 57,793,534 (-)	NCBI		Celera
Cytogenetic Map	12	q14.1	NCBI
HuRef	12	55,154,914 - 55,172,785 (-)	NCBI		HuRef
CHM1_1	12	58,085,878 - 58,103,748 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	12	57,692,114 - 57,710,515 (-)	NCBI		T2T-CHM13v2.0

Agap2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	126,911,154 - 126,929,039 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	126,911,153 - 126,929,038 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	10	127,075,269 - 127,093,170 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	127,075,284 - 127,093,169 (+)	Ensembl			mm10	GRCm38
MGSCv37	10	126,515,963 - 126,530,225 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	10	126,481,856 - 126,496,118 (+)	NCBI		MGSCv36	mm8
Celera	10	129,471,732 - 129,485,790 (+)	NCBI		Celera
Cytogenetic Map	10	D3	NCBI
cM Map	10	74.5	NCBI

Agap2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955458	5,436,630 - 5,448,057 (-)	Ensembl
ChiLan1.0	NW_004955458	5,436,544 - 5,448,201 (-)	NCBI	ChiLan1.0	ChiLan1.0

AGAP2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	36,602,024 - 36,615,795 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	36,598,799 - 36,612,566 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	31,187,821 - 31,201,594 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3

AGAP2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	10	1,791,273 - 1,807,710 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	10	1,792,733 - 1,807,610 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	10	1,855,358 - 1,870,825 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	10	1,801,544 - 1,817,032 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	10	1,800,853 - 1,816,880 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	10	1,779,294 - 1,794,745 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	10	2,021,392 - 2,032,997 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	10	2,146,257 - 2,161,696 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Agap2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	56,989,185 - 57,005,081 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936646	1,865,395 - 1,876,453 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936646	1,865,154 - 1,881,614 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

AGAP2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	23,017,176 - 23,033,517 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	5	23,015,777 - 23,035,943 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

AGAP2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	53,638,722 - 53,655,826 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	11	53,640,079 - 53,651,913 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666037	192,306,463 - 192,324,995 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Agap2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624802	10,205,375 - 10,218,288 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624802	10,205,376 - 10,219,977 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Agap2
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	1	205,503,539 - 205,520,421 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Agap2
39 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	314
Count of miRNA genes:	180
Interacting mature miRNAs:	226
Transcripts:	ENSRNOT00000031230
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
7411569	Bw137	Body weight QTL 137		0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	7	23807606	68807606	Rat
10053722	Scort27	Serum corticosterone level QTL 27	2.41	0.0083	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	7	45113903	90113903	Rat
1549840	Bss5	Bone structure and strength QTL 5	9.8		femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	7	26638057	71638057	Rat
1357336	Gluco6	Glucose level QTL 6	3.4		blood glucose amount (VT:0000188)	serum glucose level (CMO:0000543)	7	51700643	96700643	Rat
1300127	Srn1	Serum renin concentration QTL 1	3.87		blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	7	24179478	86817926	Rat
10059605	Kidm47	Kidney mass QTL 47	2.91	0.05	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	7	49137999	67614020	Rat
1358361	Sradr5	Stress Responsive Adrenal Weight QTL 5	5.55		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	7	31770293	110435881	Rat
1298525	Cm1	Cardiac mass QTL 1	2.7		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	7	56625161	101625161	Rat
631513	Scl7	Serum cholesterol level QTL 7	4.1		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	7	39845902	84845902	Rat
631504	Cm27	Cardiac mass QTL 27	3.45		heart left ventricle mass (VT:0007031)	heart left ventricle wet weight (CMO:0000071)	7	46307490	127866166	Rat
10755453	Coatc12	Coat color QTL 12		0	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	7	32998702	77998702	Rat
1559283	Emca4	Estrogen-induced mammary cancer QTL 4	3.7		mammary gland integrity trait (VT:0010552)	percentage of study population developing mammary tumors during a period of time (CMO:0000948)	7	63889858	108889858	Rat
1300151	Bp181	Blood pressure QTL 181	3.36		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	7	55498584	105834451	Rat
7411605	Foco14	Food consumption QTL 14	24.1	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	7	36178764	81178764	Rat
738030	Anxrr8	Anxiety related response QTL 8	4.1		exploratory behavior trait (VT:0010471)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	7	48475049	93475049	Rat
1643004	Pain2	Pain QTL 2	1		mechanical nociception trait (VT:0002734)	self mutilation severity score (CMO:0002145)	7	10112916	99900612	Rat
1300149	Cm6	Cardiac mass QTL 6	4.09		heart mass (VT:0007028)	heart left ventricle weight to body weight ratio (CMO:0000530)	7	1	104117804	Rat
631534	Lnnr1	Liver neoplastic nodule remodeling QTL 1	3.85	0.001	liver integrity trait (VT:0010547)	liver remodeling tumorous lesion number to liver total tumorous lesion number ratio (CMO:0001705)	7	36178764	81178764	Rat
634336	Anxrr17	Anxiety related response QTL 17	3.66		locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	7	1509236	116977875	Rat
61357	Bp38	Blood pressure QTL 38	1.6	0.052	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	40540077	123682549	Rat
70190	Mcs6	Mammary carcinoma susceptibility QTL 6	2.29		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	7	28624575	65788017	Rat
2316947	Rf58	Renal function QTL 58	7.8		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	7	49682832	115766396	Rat
1298528	Bp169	Blood pressure QTL 169		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	62963207	107963207	Rat
1576303	Ept7	Estrogen-induced pituitary tumorigenesis QTL 7	3.7		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	7	63889858	108889858	Rat
1300132	Bp182	Blood pressure QTL 182	3.49		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	7	21541977	86817926	Rat
2316955	Stl24	Serum triglyceride level QTL 24	7.1		blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	7	49682832	115766396	Rat
2316952	Pur22	Proteinuria QTL 22	5.2		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	7	49682832	115766396	Rat
2303582	Gluco53	Glucose level QTL 53	3		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	7	48603087	93603087	Rat
70207	Niddm31	Non-insulin dependent diabetes mellitus QTL 31	3.9		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	7	20057232	65057232	Rat
61439	Cia8	Collagen induced arthritis QTL 8	5.1		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	7	27182914	72182914	Rat

Markers in Region

RH132545

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	7	64,799,348 - 64,799,543 (+)	Marker Load Pipeline
mRatBN7.2	7	62,914,019 - 62,914,214 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	70,377,147 - 70,377,341	NCBI	Rnor6.0
Rnor_5.0	7	70,554,849 - 70,555,043	UniSTS	Rnor5.0
RGSC_v3.4	7	67,043,634 - 67,043,828	UniSTS	RGSC3.4
Cytogenetic Map	7	q22	UniSTS

RH140015

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	7	64,793,943 - 64,794,505 (+)	Marker Load Pipeline
mRatBN7.2	7	62,908,614 - 62,909,176 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	70,371,742 - 70,372,303	NCBI	Rnor6.0
Rnor_5.0	7	70,549,444 - 70,550,005	UniSTS	Rnor5.0
RGSC_v3.4	7	67,038,229 - 67,038,790	UniSTS	RGSC3.4
Celera	7	60,051,983 - 60,052,544	UniSTS
RH 3.4 Map	4	512.1	UniSTS
Cytogenetic Map	7	q22	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	163	91	90	59	92	59	6	356	192	11	139	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_023026	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006241499	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006241500	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008765421	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063264227	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AF280816	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY128688	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473950	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000031230 ⟹ ENSRNOP00000029533

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	64,786,816 - 64,799,640 (+)	Ensembl
mRatBN7.2 Ensembl	7	62,901,605 - 62,914,295 (+)	Ensembl
Rnor_6.0 Ensembl	7	70,364,813 - 70,377,422 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000084012 ⟹ ENSRNOP00000069597

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	64,786,816 - 64,799,624 (+)	Ensembl
mRatBN7.2 Ensembl	7	62,901,605 - 62,914,295 (+)	Ensembl
Rnor_6.0 Ensembl	7	70,364,813 - 70,372,286 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000117693 ⟹ ENSRNOP00000093674

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	64,782,612 - 64,799,623 (+)	Ensembl
mRatBN7.2 Ensembl	7	62,897,282 - 62,914,295 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000136987 ⟹ ENSRNOP00000109311

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	64,786,816 - 64,799,624 (+)	Ensembl

RefSeq Acc Id:

NM_023026 ⟹ NP_075415

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	64,787,015 - 64,799,624 (+)	NCBI
mRatBN7.2	7	62,901,686 - 62,914,295 (+)	NCBI
Rnor_6.0	7	70,364,813 - 70,377,422 (+)	NCBI
Rnor_5.0	7	70,538,136 - 70,555,124 (+)	NCBI
RGSC_v3.4	7	67,031,300 - 67,043,909 (+)	RGD
Celera	7	60,045,054 - 60,057,649 (+)	RGD

Sequence:

show sequence

ATGAGCCGGGGCGCGGGCGCGCTTCAGCGCCGGACAACGACCTACCTCATCTCGCTGACCCTGG
TCAAGCTCGAGTCGGTACCTCCGCCGCCGCCTTCTCCGTCTGCAGCTGCGGTCGGCGCCCCTGG
GGCCAGAGGCTCGGAGCCCCGAGATCCTGGCAGCCCCCGAGGCGCGGAGGAACCCGGCAAGAAG
CGGCACGAGCGTCTCTTCCACCGGCAGGATGCGCTGTGGATCAGTACCAGCAGCGCGGGCGCCG
GGGGCGCGGAGCCCCCCGCGCTGTCCCCGGCTCCGGCCAGTCCGGCTCGCCCGGTCTCCCCGGC
TCCGGGCCGCCGACTGTCCCTCTGGGCCGCCCCTCCGGGACCCCCGCTCTCCGGGGGGCTGAGC
CCGGACTCCAAGCCGGGGGGCGCCCCCTCTTCCTCTCGGCGCCCTCTACTCAGCAGCCCGAGCT
GGGGGGGTCCGGAACCTGAAGGCCGGACGGGTGGCGGCGTCCCGGGCTCGTCCTCCCCGCATCC
TGGCACCGGTAGCCGAAGGCTCAAGGTGGCGCCTCCTCCGCCAGCTCCCAAGCCTTTCAAGACC
GTGACCACTAGTGGAGCCAAAGCCGGCGGGGGCAAGGGCGCGGGTAGCCGCCTGTCATGGCCCG
AAAGCGAGGGCAAACCCAGGGTCAAGGGGTCAAAGAGCACCGCCGGGACTGGAGCCTCTGCCGT
TGCGGCCGGCGGGGGAGGGAGCGCTGCAGTCACGACCTCTGGTGGGGTCGGTGCTGGGGCTGGA
GCGAGAGGAAAATTGTCCCCTCGGAAAGGCAAGAGTAAGACCTTGGACAATAGTGACTTGCACC
CAGGACCCAGTGCCGGTTCTCCTCCGCTCACCGTGCCAGCAATCCCAGTTCCAGCTACTTCTGT
CACTGCCGCCTCCACGCAGCCCCTCGGGCCTGCACCCCCTATCACTCTGGAGCCACCAGCTCCG
GGGCTAAAAAGGGGCCGGGAGGGCGGCCGAGCGTCCACTCGTGACCGCAAGATGCTCAAGTTTA
TCAGCGGTATCTTCACCAAGAGCACAGGAGGGCCTCCCGGTCCCGGGCCCCTTCCCGGACCCCA
AGGCTTGTCTTCCAGCAGCGGGTCCAGGGAGCTGCTGGGCGCAGAGCTACGCGCCTCCCCTAAG
GCTGTGGTCAATAGTCAGGAATGGACTTTGAGCCGATCAATTCCCGAACTGCGCCTGGGTGTGC
TGGGTGATGTCAGGAGTGGGAAGTCATCCCTCATCCACAGATTCCTCACGGGTTCATACCAGGT
GCTGGAGAAGCCTGAGAGTGAGCAGTACAAGAAGGAGATGCTGGTGGATGGGCAGACCCATCTG
GTGCTGATCCGAGAGGAAGCAGGGGCACCGGATGCCAAGTTCTCAGGCTGGGCAGATGCTGTGA
TCTTCGTCTTCAGCCTGGAGGATGAGAGCAGCTTCCAGGCTGTGAGCCATCTCCATGGGCAGCT
GATCTCCCTCCGGGGGGAGGGACGAGGAGGTCTGGCCCTTGCCCTGGTTGGGACCCAAGACAGG
ATCAGCGCATCGTCCCCTCGAGTGGTGGGTGATGCTCGAGCCCGGGCATTGTGTACCGACATGA
AGCGCTGCAGCTACTATGAGACCTGTGCAACCTATGGGCTCAATGTGGACCGGGTCTTCCAGGA
GGTGGCCCAGAAGGTGGTGACCTTGCGCAAACAGCAGCAACTCCTGGCGGCTTGCAAGTCCCTG
CCCAGCTCACCGAGCCATTCAGCTGCTTCTACTCCTGTAGCTGGGCAGGCTAGTAATGGGGGCC
ACACTAGCGACTACTCTTCTTCCCTCCCATCTTCACCCAATGTTGGACACCGGGAGCTCCGGGC
TGAGGCAGCTGCGGTGGCTGGGTTGAGCACCCCAGGGTCCTTACATCGAGCAGCCAAGCGGCGG
ACCAGCCTTTTTGCGAACCGTCGAGGCAGTGATTCTGAGAAACGGAGCTTAGACAGTCGGGGCG
AGACAACAGGGAGTGGGCGAGCCATCCCCATTAAACAGAGTTTCCTGCTAAAGCGAAGTGGCAA
TTCCTTGAACAAAGAGTGGAAGAAGAAATACGTGACCTTGTCCAGCAATGGCTTTCTGCTCTAC
CACCCTAGCATTAATGATTACATCCACAGTACACACGGCAAAGAGATGGACTTGTTACGAACAA
CAGTCAAAGTCCCAGGCAAGCGGCCCCCAAGGGCTATCTCTGCTTTCGGCCCCTCAGCCAGCAT
CAATGGGTTGGTCAAGGATATGAGCACTGTCCAGATGGGTGAAGGCCCTGAAGCCTCAACTCCA
ATGCCAAGCCCCAGTCCCAGCCCCAGCTCCCTGCAGCTCCCAACAGACCAAACATCCAAGCACC
TGTTGAAGCCAGACCGGAATTTGGCCCGTGCCCTTAGCACCGACTGTACCCCATCTGGAGACCT
GAGTCCCCTGAGTCGGGAACCCCCACCTTCTCCCATGGTGAAGAAGCAGAGGAGGAAGAAATTG
TCCACACCATCTAAGACTGAAGGCTCAGCTGTGCAGGCTGAAGCCAAGCGCAAAATGTGGAAAC
TAAAATCCTTTGGTAGTTTAAGAAATATTTATAAAGCAGAGGAAAACTTTGAGTTCCTGATCGT
GTCCAGCACTGGTCAGACGTGGCACTTTGAGGCAGCCAGCTTCGAGGAGAGGGATGCCTGGGTT
CAGGCCATTGAGAGTCAGATCCTGGCCAGTCTGCAATGCTGTGAGAGCAGCAAGGTCAAGCTGC
GCACTGACAGCCAAAGTGAAGCCGTGGCCATCCAGGCGATCCGCAACGCAAAGGGAAACTCGAC
CTGTGTGGACTGTGGAGCCCCCAACCCCACGTGGGCCAGTTTGAATCTGGGCGCACTCATCTGC
ATCGAATGTTCTGGCATCCACCGGAACCTGGGCACGCACCTGTCTCGAGTGCGTTCGCTGGACT
TGGATGACTGGCCGCGGGAGCTGACCCTGGTGCTGACGGCCATTGGCAACGACACGGCCAATCG
CGTGTGGGAGAGCGACACTCGGGGCCGTGCCAAGCCCACGCGGGACTCTTCGAGGGAGGAGCGT
GAGTCGTGGATTCGGGCCAAGTACGAACAGCTGCTGTTCCTGGCGCCTCTGGGCACCACGGAGG
AGCCGCTGGGCCGCCAACTGTGGGCCGCTGTGGAGGCCCAGGACGTGGCCGCCGTTCTGCTGCT
TCTGGCCCACGCGCGACATGGGCCGCTGGACACCAGCGTGGAGGACCCTCAGCTCCGCTCGCCG
CTGCACTTGGCGGCCGAGCTCGCCCACGTTGTTATTACACAGCTGCTGTTGTGGTATGGCGCAG
ACGTGGCGGCCCGCGATGCGCAGGGCCGCACAGCATTGTTCTACGCCCGCCAGGCTGGCAGCCA
GCTATGTGCAGACATCCTCCTCCAGCACGGCTGTCCGGGAGAGGGCGGCAGTACAGCCACCACG
CCCAGCGCGGCCACCACCCCCAGCATTACCGCCACGCCCAGCCCGAGGCGCCGGAGCAGTGCTG
CCAGCTTGGGTCGCGTGGACACCACGATCGCGCTGGTATAGTTGCCCAGCCGCGGGAGAGACAC
CCCTCACCCCCGCGCGGGCCAGGCACGACTACACCGGGTGGACCATTGGACAGATGCACCCACT
CACCTCTCCAGTCCGCACCCCGTCCCACGGGAGCACTTTCTACCCCCACGAGGGCACAGCCCCG
CACGCCTCCCAGGAGACACAAACTCACCTCCCTCTCCCCAGCGAGGCATGGAGACCCTAGCTCA
TCACGCCCCTACTTCACAGCTTCCTTACTTGGATTGCCCTGGGTCTACCTGCTGGGTGTTTGTA
GGTGGGCACTCCCTGTATGGGCTCCAAGGTGCTTGGACTTGCTGGCTTGTGCCCCCTAGGGGCG
GGGAAAAGATCCAGTCCTGCCTGCGTTCTACAATCGGGTGGCCGGAGCCGAAACCCAGGCTGGC
TCCTGGGGCAACGCCACACCAGAGGGAGGGGTTAGTATGTGGAAGACTAGCCCTGGGACTTGGG
ACCAATTTGGGGACCCCACCCCTTCCATGCTAATCTCACTGCCCAGTGAGGGGGGAGGGCAGCG
AGGGGCAGGACCCCTGCTGCCCATGGAGGTGGAGGGGTCCCCAACCCTTTCCGTGAAAGGGACC
ATGAGGAGTGGAAATCAGATATCCCCCCTCTACCTATCTATGAATGGAAGCTAAAGAGCCAGGG
GGAGCCGAGAGCCTGGGTCCTTCCCCTTACAATCTTGGGGTAGGGGAAGGAGGATTGGAACAGG
AGGGGACTAGAGAGGGGCCTTGTAATTTATTGCTTTGTTCCCCAACATGGGGATGGGGTGGGTA
GGGGCAAGGGGAGGGCATTTCAGGGTAGGGGAAGCCAGGGGTGGGTAGGGGTGGGGTGGGATGG
GGGTGCTCTCGGGTTGTGTCTGTGACTGTGACTGCGTACCTGTGACTGTGCAGCGCCCGTGGTG
ATCTGGGGTAGGGGGCACCCCTACAATGGGACCCCTCCCCCATAATCCTTTCTGTCCAGCCCCT
CTCTCACTGGAGCAGCTCCAGGTCCGTTTCTCCTTTGCTCCCTCCCAGCCGGGGCTGAGAGGGT
GTGTAGTGGCTGGAAGGGTTTCAAGGTCCTTGCCCCATCCCCAGAAAGGGGGAGATGGTGTGGA
CTTCTCTGGCCCAGCCCTGCCACCCTTATTCAGCCCGGCTTTGGGCCGTCTGTGTCAGTGGTTT
CCGGTCTTTTTTTTTCCTGGCTAAAATATTTTGCAAAAGACCAGGTAATTGGGCAGTGGAGTGA
AGAGGGGGCAGGGGTTACCCCCCTCACCTCCAAAGCAGGTGGTGTGAATCTTAACAGCAATTAA
AGAGCAAGTGGTTTTGTCTA

hide sequence

RefSeq Acc Id:

XM_006241499 ⟹ XP_006241561

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	64,785,954 - 64,799,624 (+)	NCBI
mRatBN7.2	7	62,900,957 - 62,913,345 (+)	NCBI
Rnor_6.0	7	70,364,055 - 70,376,472 (+)	NCBI
Rnor_5.0	7	70,538,136 - 70,555,124 (+)	NCBI

Sequence:

show sequence

GGAGAGATGGGGTGGGGGGGCCCGCGGGCCGCCTCCTCCTCAATGTGAGGGGAGCGCCCGGACA
CAACGCGCATCCGGACCGAGCCGATCCCGGGCGAACTTCCCCCCCCCCGCGACTCTTCTCCAGG
ATCCACGCCCCTCCCCTCCCAGACCCCAGACCCGTGGGTTCCTACCCCCTCCCGTTCCCTCTTT
CCTCCCCCACTGCCTCCAATATCTCCATCCCTAGCATCCTCCCCGTGCTCCTGCGAATCCCCCG
CACAGACAGCCCCACTAGTCTCATTACCCCAAGACCCCCCTTTCCCACTGCATCCGCGGCCTCT
GTCCATTGAGTCCGCATTCCCGCCCCTGCCTTCCCCTCACCCGAGCTTCTCCTCCAGTCCTCTG
TCCCCTTTTCTACCCCTTTTCCTTCATCCCCATTTGCCCCCACTACTGTCCTCCCCACCCTCCT
CCGCCCATCTCAACGCCCCCACCCAGACCCGGGTGCACGATCCGGCGCGCCTCCCTGGAGCAGC
ACCAAGGTCCCGGGGCTCCAAGGGGGTGGGGGCGCAGGGCGGGGAGCATGGGGAGGGGGCGCCC
CATGTGATGGGAGGGGGGCGCAAGAGGAGGCGGCGGAGGCGGCGGCGACAGCGGAGCCGGGCCG
GGGGCTCAGAGGGGTCCGGGGGCTGGGGGCAGCGAGCAGGGCGGCCCCATGGCTGGGCCCCCCT
GAGGCAGACCCGGGGAGTCCCCTCCCCTCCCCAGCTCGGGGGTCTCCGGGCCCCATGAGCCGGG
GCGCGGGCGCGCTTCAGCGCCGGACAACGACCTACCTCATCTCGCTGACCCTGGTCAAGCTCGA
GTCGGTACCTCCGCCGCCGCCTTCTCCGTCTGCAGCTGCGGTCGGCGCCCCTGGGGCCAGAGGC
TCGGAGCCCCGAGATCCTGGCAGCCCCCGAGGCGCGGAGGAACCCGGCAAGAAGCGGCACGAGC
GTCTCTTCCACCGGCAGGATGCGCTGTGGATCAGTACCAGCAGCGCGGGCGCCGGGGGCGCGGA
GCCCCCCGCGCTGTCCCCGGCTCCGGCCAGTCCGGCTCGCCCGGTCTCCCCGGCTCCGGGCCGC
CGACTGTCCCTCTGGGCCGCCCCTCCGGGACCCCCGCTCTCCGGGGGGCTGAGCCCGGACTCCA
AGCCGGGGGGCGCCCCCTCTTCCTCTCGGCGCCCTCTACTCAGCAGCCCGAGCTGGGGGGGTCC
GGAACCTGAAGGCCGGACGGGTGGCGGCGTCCCGGGCTCGTCCTCCCCGCATCCTGGCACCGGT
AGCCGAAGGCTCAAGGTGGCGCCTCCTCCGCCAGCTCCCAAGCCTTTCAAGACCGTGACCACTA
GTGGAGCCAAAGCCGGCGGGGGCAAGGGCGCGGGTAGCCGCCTGTCATGGCCCGAAAGCGAGGG
CAAACCCAGGGTCAAGGGGTCAAAGAGCACCGCCGGGACTGGAGCCTCTGCCGTTGCGGCCGGC
GGGGGAGGGAGCGCTGCAGTCACGACCTCTGGTGGGGTCGGTGCTGGGGCTGGAGCGAGAGGAA
AATTGTCCCCTCGGAAAGGCAAGAGTAAGACCTTGGACAATAGTGACTTGCACCCAGGACCCAG
TGCCGGTTCTCCTCCGCTCACCGTGCCAGCAATCCCAGTTCCAGCTACTTCTGTCACTGCCGCC
TCCACGCAGCCCCTCGGGCCTGCACCCCCTATCACTCTGGAGCCACCAGCTCCGGGGCTAAAAA
GGGGCCGGGAGGGCGGCCGAGCGTCCACTCGTGACCGCAAGATGCTCAAGTTTATCAGCGGTAT
CTTCACCAAGAGCACAGGAGGGCCTCCCGGTCCCGGGCCCCTTCCCGGACCCCAAGGCTTGTCT
TCCAGCAGCGGGTCCAGGGAGCTGCTGGGCGCAGAGCTACGCGCCTCCCCTAAGGCTGTGGTCA
ATAGTCAGGAATGGACTTTGAGCCGATCAATTCCCGAACTGCGCCTGGGTGTGCTGGGTGATGT
CAGGAGTGGGAAGTCATCCCTCATCCACAGATTCCTCACGGGTTCATACCAGGTGCTGGAGAAG
CCTGAGAGTGAGCAGTACAAGAAGGAGATGCTGGTGGATGGGCAGACCCATCTGGTGCTGATCC
GAGAGGAAGCAGGGGCACCGGATGCCAAGTTCTCAGGCTGGGCAGATGCTGTGATCTTCGTCTT
CAGCCTGGAGGATGAGAGCAGCTTCCAGGCTGTGAGCCATCTCCATGGGCAGCTGATCTCCCTC
CGGGGGGAGGGACGAGGAGGTCTGGCCCTTGCCCTGGTTGGGACCCAAGACAGGATCAGCGCAT
CGTCCCCTCGAGTGGTGGGTGATGCTCGAGCCCGGGCATTGTGTACCGACATGAAGCGCTGCAG
CTACTATGAGACCTGTGCAACCTATGGGCTCAATGTGGACCGGGTCTTCCAGGAGGTGGCCCAG
AAGGTGGTGACCTTGCGCAAACAGCAGCAACTCCTGGCGGCTTGCAAGTCCCTGCCCAGCTCAC
CGAGCCATTCAGCTGCTTCTACTCCTGTAGCTGGGCAGGCTAGTAATGGGGGCCACACTAGCGA
CTACTCTTCTTCCCTCCCATCTTCACCCAATGTTGGACACCGGGAGCTCCGGGCTGAGGCAGCT
GCGGTGGCTGGGTTGAGCACCCCAGGGTCCTTACATCGAGCAGCCAAGCGGCGGACCAGCCTTT
TTGCGAACCGTCGAGGCAGTGATTCTGAGAAACGGAGCTTAGACAGTCGGGGCGAGACAACAGG
GAGTGGGCGAGCCATCCCCATTAAACAGAGTTTCCTGCTAAAGCGAAGTGGCAATTCCTTGAAC
AAAGAGTGGAAGAAGAAATACGTGACCTTGTCCAGCAATGGCTTTCTGCTCTACCACCCTAGCA
TTAATGATTACATCCACAGTACACACGGCAAAGAGATGGACTTGTTACGAACAACAGTCAAAGT
CCCAGGCAAGCGGCCCCCAAGGGCTATCTCTGCTTTCGGCCCCTCAGCCAGCATCAATGGGTTG
GTCAAGGATATGAGCACTGTCCAGATGGGTGAAGGCCCTGAAGCCTCAACTCCAATGCCAAGCC
CCAGTCCCAGCCCCAGCTCCCTGCAGCTCCCAACAGACCAAACATCCAAGCACCTGTTGAAGCC
AGACCGGAATTTGGCCCGTGCCCTTAGCACCGACTGTACCCCATCTGGAGACCTGAGTCCCCTG
AGTCGGGAACCCCCACCTTCTCCCATGGTGAAGAAGCAGAGGAGGAAGAAATTGTCCACACCAT
CTAAGACTGAAGGCTCAGCTGTGCAGGCTGAAGAGGAAAACTTTGAGTTCCTGATCGTGTCCAG
CACTGGTCAGACGTGGCACTTTGAGGCAGCCAGCTTCGAGGAGAGGGATGCCTGGGTTCAGGCC
ATTGAGAGTCAGATCCTGGCCAGTCTGCAATGCTGTGAGAGCAGCAAGGTCAAGCTGCGCACTG
ACAGCCAAAGTGAAGCCGTGGCCATCCAGGCGATCCGCAACGCAAAGGGAAACTCGACCTGTGT
GGACTGTGGAGCCCCCAACCCCACGTGGGCCAGTTTGAATCTGGGCGCACTCATCTGCATCGAA
TGTTCTGGCATCCACCGGAACCTGGGCACGCACCTGTCTCGAGTGCGTTCGCTGGACTTGGATG
ACTGGCCGCGGGAGCTGACCCTGGTGCTGACGGCCATTGGCAACGACACGGCCAATCGCGTGTG
GGAGAGCGACACTCGGGGCCGTGCCAAGCCCACGCGGGACTCTTCGAGGGAGGAGCGTGAGTCG
TGGATTCGGGCCAAGTACGAACAGCTGCTGTTCCTGGCGCCTCTGGGCACCACGGAGGAGCCGC
TGGGCCGCCAACTGTGGGCCGCTGTGGAGGCCCAGGACGTGGCCGCCGTTCTGCTGCTTCTGGC
CCACGCGCGACATGGGCCGCTGGACACCAGCGTGGAGGACCCTCAGCTCCGCTCGCCGCTGCAC
TTGGCGGCCGAGCTCGCCCACGTTGTTATTACACAGCTGCTGTTGTGGTATGGCGCAGACGTGG
CGGCCCGCGATGCGCAGGGCCGCACAGCATTGTTCTACGCCCGCCAGGCTGGCAGCCAGCTATG
TGCAGACATCCTCCTCCAGCACGGCTGTCCGGGAGAGGGCGGCAGTACAGCCACCACGCCCAGC
GCGGCCACCACCCCCAGCATTACCGCCACGCCCAGCCCGAGGCGCCGGAGCAGTGCTGCCAGCT
TGGGTCGCGTGGACACCACGATCGCGCTGGTATAGTTGCCCAGCCGCGGGAGAGACACCCCTCA
CCCCCGCGCGGGCCAGGCACGACTACACCGGGTGGACCATTGGACAGATGCACCCACTCACCTC
TCCAGTCCGCACCCCGTCCCACGGGAGCACTTTCTACCCCCACGAGGGCACAGCCCCGCACGCC
TCCCAGGAGACACAAACTCACCTCCCTCTCCCCAGCGAGGCATGGAGACCCTAGCTCATCACGC
CCCTACTTCACAGCTTCCTTACTTGGATTGCCCTGGGTCTACCTGCTGGGTGTTTGTAGGTGGG
CACTCCCTGTATGGGCTCCAAGGTGCTTGGACTTGCTGGCTTGTGCCCCCTAGGGGCGGGGAAA
AGATCCAGTCCTGCCTGCGTTCTA

hide sequence

RefSeq Acc Id:

XM_006241500 ⟹ XP_006241562

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	64,782,618 - 64,799,624 (+)	NCBI
mRatBN7.2	7	62,897,283 - 62,913,345 (+)	NCBI
Rnor_6.0	7	70,360,202 - 70,376,472 (+)	NCBI
Rnor_5.0	7	70,538,136 - 70,555,124 (+)	NCBI

Sequence:

show sequence

CTCCAGAACCCACACCCATCTTAATCAGCTGCCCCCCACTGAGGTCTCACTCATTAAGGCTGCT
CCCCTCACCTGACTGAGCAATCATAACTGCGGCCCGGCTGTCAGCTGTCAGAGCTGAAGGGTCA
ACGCTAGAGGGGGCAGGAGGTGTAAGAGGTAGTACCGTGTGGGTTGTGGGTTTGAAGCTCACCA
GTCAGGAAGTGAGGCCGACAGACGGAAGGGCGGGCAGGGTTGAGGAGTTCTGGGGCACAGCAGA
AGGGGCCTTCTGAAGTTTGGGAGCTGTGGGGTCATGGGCGTCAGAGCCAGAGGCAGTTGGTAAT
CTGGCAAGGCAAGACTGCGCAACATGCATGCCCAGAGGCAGTTGGCTATAGTCACAGTAAGAGC
AGAAGTCAGGCGACATGAGGTGGCCAAGCAAGCTCTAAGCCGACTCAGGAAGCTGGCAGAGAGA
GTGGGTGACCCTGAACTCCGAGCTGGCATCCAGGCCTCACTGGACAGCATACGAGAGGCTGTGG
TCAATAGTCAGGAATGGACTTTGAGCCGATCAATTCCCGAACTGCGCCTGGGTGTGCTGGGTGA
TGTCAGGAGTGGGAAGTCATCCCTCATCCACAGATTCCTCACGGGTTCATACCAGGTGCTGGAG
AAGCCTGAGAGTGAGCAGTACAAGAAGGAGATGCTGGTGGATGGGCAGACCCATCTGGTGCTGA
TCCGAGAGGAAGCAGGGGCACCGGATGCCAAGTTCTCAGGCTGGGCAGATGCTGTGATCTTCGT
CTTCAGCCTGGAGGATGAGAGCAGCTTCCAGGCTGTGAGCCATCTCCATGGGCAGCTGATCTCC
CTCCGGGGGGAGGGACGAGGAGGTCTGGCCCTTGCCCTGGTTGGGACCCAAGACAGGATCAGCG
CATCGTCCCCTCGAGTGGTGGGTGATGCTCGAGCCCGGGCATTGTGTACCGACATGAAGCGCTG
CAGCTACTATGAGACCTGTGCAACCTATGGGCTCAATGTGGACCGGGTCTTCCAGGAGGTGGCC
CAGAAGGTGGTGACCTTGCGCAAACAGCAGCAACTCCTGGCGGCTTGCAAGTCCCTGCCCAGCT
CACCGAGCCATTCAGCTGCTTCTACTCCTGTAGCTGGGCAGGCTAGTAATGGGGGCCACACTAG
CGACTACTCTTCTTCCCTCCCATCTTCACCCAATGTTGGACACCGGGAGCTCCGGGCTGAGGCA
GCTGCGGTGGCTGGGTTGAGCACCCCAGGGTCCTTACATCGAGCAGCCAAGCGGCGGACCAGCC
TTTTTGCGAACCGTCGAGGCAGTGATTCTGAGAAACGGAGCTTAGACAGTCGGGGCGAGACAAC
AGGGAGTGGGCGAGCCATCCCCATTAAACAGAGTTTCCTGCTAAAGCGAAGTGGCAATTCCTTG
AACAAAGAGTGGAAGAAGAAATACGTGACCTTGTCCAGCAATGGCTTTCTGCTCTACCACCCTA
GCATTAATGATTACATCCACAGTACACACGGCAAAGAGATGGACTTGTTACGAACAACAGTCAA
AGTCCCAGGCAAGCGGCCCCCAAGGGCTATCTCTGCTTTCGGCCCCTCAGCCAGCATCAATGGG
TTGGTCAAGGATATGAGCACTGTCCAGATGGGTGAAGGCCCTGAAGCCTCAACTCCAATGCCAA
GCCCCAGTCCCAGCCCCAGCTCCCTGCAGCTCCCAACAGACCAAACATCCAAGCACCTGTTGAA
GCCAGACCGGAATTTGGCCCGTGCCCTTAGCACCGACTGTACCCCATCTGGAGACCTGAGTCCC
CTGAGTCGGGAACCCCCACCTTCTCCCATGGTGAAGAAGCAGAGGAGGAAGAAATTGTCCACAC
CATCTAAGACTGAAGGCTCAGCTGTGCAGGCTGAAGAGGAAAACTTTGAGTTCCTGATCGTGTC
CAGCACTGGTCAGACGTGGCACTTTGAGGCAGCCAGCTTCGAGGAGAGGGATGCCTGGGTTCAG
GCCATTGAGAGTCAGATCCTGGCCAGTCTGCAATGCTGTGAGAGCAGCAAGGTCAAGCTGCGCA
CTGACAGCCAAAGTGAAGCCGTGGCCATCCAGGCGATCCGCAACGCAAAGGGAAACTCGACCTG
TGTGGACTGTGGAGCCCCCAACCCCACGTGGGCCAGTTTGAATCTGGGCGCACTCATCTGCATC
GAATGTTCTGGCATCCACCGGAACCTGGGCACGCACCTGTCTCGAGTGCGTTCGCTGGACTTGG
ATGACTGGCCGCGGGAGCTGACCCTGGTGCTGACGGCCATTGGCAACGACACGGCCAATCGCGT
GTGGGAGAGCGACACTCGGGGCCGTGCCAAGCCCACGCGGGACTCTTCGAGGGAGGAGCGTGAG
TCGTGGATTCGGGCCAAGTACGAACAGCTGCTGTTCCTGGCGCCTCTGGGCACCACGGAGGAGC
CGCTGGGCCGCCAACTGTGGGCCGCTGTGGAGGCCCAGGACGTGGCCGCCGTTCTGCTGCTTCT
GGCCCACGCGCGACATGGGCCGCTGGACACCAGCGTGGAGGACCCTCAGCTCCGCTCGCCGCTG
CACTTGGCGGCCGAGCTCGCCCACGTTGTTATTACACAGCTGCTGTTGTGGTATGGCGCAGACG
TGGCGGCCCGCGATGCGCAGGGCCGCACAGCATTGTTCTACGCCCGCCAGGCTGGCAGCCAGCT
ATGTGCAGACATCCTCCTCCAGCACGGCTGTCCGGGAGAGGGCGGCAGTACAGCCACCACGCCC
AGCGCGGCCACCACCCCCAGCATTACCGCCACGCCCAGCCCGAGGCGCCGGAGCAGTGCTGCCA
GCTTGGGTCGCGTGGACACCACGATCGCGCTGGTATAGTTGCCCAGCCGCGGGAGAGACACCCC
TCACCCCCGCGCGGGCCAGGCACGACTACACCGGGTGGACCATTGGACAGATGCACCCACTCAC
CTCTCCAGTCCGCACCCCGTCCCACGGGAGCACTTTCTACCCCCACGAGGGCACAGCCCCGCAC
GCCTCCCAGGAGACACAAACTCACCTCCCTCTCCCCAGCGAGGCATGGAGACCCTAGCTCATCA
CGCCCCTACTTCACAGCTTCCTTACTTGGATTGCCCTGGGTCTACCTGCTGGGTGTTTGTAGGT
GGGCACTCCCTGTATGGGCTCCAAGGTGCTTGGACTTGCTGGCTTGTGCCCCCTAGGGGCGGGG
AAAAGATCCAGTCCTGCCTGCGTTCTA

hide sequence

RefSeq Acc Id:

XM_063264227 ⟹ XP_063120297

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	64,782,618 - 64,799,624 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_075415	(Get FASTA)	NCBI Sequence Viewer
	XP_006241561	(Get FASTA)	NCBI Sequence Viewer
	XP_006241562	(Get FASTA)	NCBI Sequence Viewer
	XP_063120297	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAF97595	(Get FASTA)	NCBI Sequence Viewer
	AAM97539	(Get FASTA)	NCBI Sequence Viewer
	EDM16498	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000029533.4
	ENSRNOP00000069597
	ENSRNOP00000093674
	ENSRNOP00000109311
GenBank Protein	Q8CGU4	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_075415 ⟸ NM_023026

- UniProtKB:

Q9JHW8 (UniProtKB/Swiss-Prot), Q8CGU4 (UniProtKB/Swiss-Prot), A6HQS4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSRGAGALQRRTTTYLISLTLVKLESVPPPPPSPSAAAVGAPGARGSEPRDPGSPRGAEEPGKK
RHERLFHRQDALWISTSSAGAGGAEPPALSPAPASPARPVSPAPGRRLSLWAAPPGPPLSGGLS
PDSKPGGAPSSSRRPLLSSPSWGGPEPEGRTGGGVPGSSSPHPGTGSRRLKVAPPPPAPKPFKT
VTTSGAKAGGGKGAGSRLSWPESEGKPRVKGSKSTAGTGASAVAAGGGGSAAVTTSGGVGAGAG
ARGKLSPRKGKSKTLDNSDLHPGPSAGSPPLTVPAIPVPATSVTAASTQPLGPAPPITLEPPAP
GLKRGREGGRASTRDRKMLKFISGIFTKSTGGPPGPGPLPGPQGLSSSSGSRELLGAELRASPK
AVVNSQEWTLSRSIPELRLGVLGDVRSGKSSLIHRFLTGSYQVLEKPESEQYKKEMLVDGQTHL
VLIREEAGAPDAKFSGWADAVIFVFSLEDESSFQAVSHLHGQLISLRGEGRGGLALALVGTQDR
ISASSPRVVGDARARALCTDMKRCSYYETCATYGLNVDRVFQEVAQKVVTLRKQQQLLAACKSL
PSSPSHSAASTPVAGQASNGGHTSDYSSSLPSSPNVGHRELRAEAAAVAGLSTPGSLHRAAKRR
TSLFANRRGSDSEKRSLDSRGETTGSGRAIPIKQSFLLKRSGNSLNKEWKKKYVTLSSNGFLLY
HPSINDYIHSTHGKEMDLLRTTVKVPGKRPPRAISAFGPSASINGLVKDMSTVQMGEGPEASTP
MPSPSPSPSSLQLPTDQTSKHLLKPDRNLARALSTDCTPSGDLSPLSREPPPSPMVKKQRRKKL
STPSKTEGSAVQAEAKRKMWKLKSFGSLRNIYKAEENFEFLIVSSTGQTWHFEAASFEERDAWV
QAIESQILASLQCCESSKVKLRTDSQSEAVAIQAIRNAKGNSTCVDCGAPNPTWASLNLGALIC
IECSGIHRNLGTHLSRVRSLDLDDWPRELTLVLTAIGNDTANRVWESDTRGRAKPTRDSSREER
ESWIRAKYEQLLFLAPLGTTEEPLGRQLWAAVEAQDVAAVLLLLAHARHGPLDTSVEDPQLRSP
LHLAAELAHVVITQLLLWYGADVAARDAQGRTALFYARQAGSQLCADILLQHGCPGEGGSTATT
PSAATTPSITATPSPRRRSSAASLGRVDTTIALV

hide sequence

RefSeq Acc Id:

XP_006241562 ⟸ XM_006241500

- Peptide Label:

isoform X3

- Sequence:

show sequence

MHAQRQLAIVTVRAEVRRHEVAKQALSRLRKLAERVGDPELRAGIQASLDSIREAVVNSQEWTL
SRSIPELRLGVLGDVRSGKSSLIHRFLTGSYQVLEKPESEQYKKEMLVDGQTHLVLIREEAGAP
DAKFSGWADAVIFVFSLEDESSFQAVSHLHGQLISLRGEGRGGLALALVGTQDRISASSPRVVG
DARARALCTDMKRCSYYETCATYGLNVDRVFQEVAQKVVTLRKQQQLLAACKSLPSSPSHSAAS
TPVAGQASNGGHTSDYSSSLPSSPNVGHRELRAEAAAVAGLSTPGSLHRAAKRRTSLFANRRGS
DSEKRSLDSRGETTGSGRAIPIKQSFLLKRSGNSLNKEWKKKYVTLSSNGFLLYHPSINDYIHS
THGKEMDLLRTTVKVPGKRPPRAISAFGPSASINGLVKDMSTVQMGEGPEASTPMPSPSPSPSS
LQLPTDQTSKHLLKPDRNLARALSTDCTPSGDLSPLSREPPPSPMVKKQRRKKLSTPSKTEGSA
VQAEEENFEFLIVSSTGQTWHFEAASFEERDAWVQAIESQILASLQCCESSKVKLRTDSQSEAV
AIQAIRNAKGNSTCVDCGAPNPTWASLNLGALICIECSGIHRNLGTHLSRVRSLDLDDWPRELT
LVLTAIGNDTANRVWESDTRGRAKPTRDSSREERESWIRAKYEQLLFLAPLGTTEEPLGRQLWA
AVEAQDVAAVLLLLAHARHGPLDTSVEDPQLRSPLHLAAELAHVVITQLLLWYGADVAARDAQG
RTALFYARQAGSQLCADILLQHGCPGEGGSTATTPSAATTPSITATPSPRRRSSAASLGRVDTT
IALV

hide sequence

RefSeq Acc Id:	XP_006241561 ⟸ XM_006241499
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2JVS4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSRGAGALQRRTTTYLISLTLVKLESVPPPPPSPSAAAVGAPGARGSEPRDPGSPRGAEEPGKK RHERLFHRQDALWISTSSAGAGGAEPPALSPAPASPARPVSPAPGRRLSLWAAPPGPPLSGGLS PDSKPGGAPSSSRRPLLSSPSWGGPEPEGRTGGGVPGSSSPHPGTGSRRLKVAPPPPAPKPFKT VTTSGAKAGGGKGAGSRLSWPESEGKPRVKGSKSTAGTGASAVAAGGGGSAAVTTSGGVGAGAG ARGKLSPRKGKSKTLDNSDLHPGPSAGSPPLTVPAIPVPATSVTAASTQPLGPAPPITLEPPAP GLKRGREGGRASTRDRKMLKFISGIFTKSTGGPPGPGPLPGPQGLSSSSGSRELLGAELRASPK AVVNSQEWTLSRSIPELRLGVLGDVRSGKSSLIHRFLTGSYQVLEKPESEQYKKEMLVDGQTHL VLIREEAGAPDAKFSGWADAVIFVFSLEDESSFQAVSHLHGQLISLRGEGRGGLALALVGTQDR ISASSPRVVGDARARALCTDMKRCSYYETCATYGLNVDRVFQEVAQKVVTLRKQQQLLAACKSL PSSPSHSAASTPVAGQASNGGHTSDYSSSLPSSPNVGHRELRAEAAAVAGLSTPGSLHRAAKRR TSLFANRRGSDSEKRSLDSRGETTGSGRAIPIKQSFLLKRSGNSLNKEWKKKYVTLSSNGFLLY HPSINDYIHSTHGKEMDLLRTTVKVPGKRPPRAISAFGPSASINGLVKDMSTVQMGEGPEASTP MPSPSPSPSSLQLPTDQTSKHLLKPDRNLARALSTDCTPSGDLSPLSREPPPSPMVKKQRRKKL STPSKTEGSAVQAEEENFEFLIVSSTGQTWHFEAASFEERDAWVQAIESQILASLQCCESSKVK LRTDSQSEAVAIQAIRNAKGNSTCVDCGAPNPTWASLNLGALICIECSGIHRNLGTHLSRVRSL DLDDWPRELTLVLTAIGNDTANRVWESDTRGRAKPTRDSSREERESWIRAKYEQLLFLAPLGTT EEPLGRQLWAAVEAQDVAAVLLLLAHARHGPLDTSVEDPQLRSPLHLAAELAHVVITQLLLWYG ADVAARDAQGRTALFYARQAGSQLCADILLQHGCPGEGGSTATTPSAATTPSITATPSPRRRSS AASLGRVDTTIALV hide sequence

Ensembl Acc Id:

ENSRNOP00000029533 ⟸ ENSRNOT00000031230

Ensembl Acc Id:

ENSRNOP00000069597 ⟸ ENSRNOT00000084012

Ensembl Acc Id:

ENSRNOP00000093674 ⟸ ENSRNOT00000117693

RefSeq Acc Id:	XP_063120297 ⟸ XM_063264227
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6AM98 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000109311 ⟸ ENSRNOT00000136987

Protein Domains

Arf-GAP GLD PH

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q8CGU4-F1-model_v2	AlphaFold	Q8CGU4	1-1186	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:628844	AgrOrtholog
BioCyc Gene	G2FUF-33774	BioCyc
Ensembl Genes	ENSRNOG00000025584	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000031230.7	UniProtKB/Swiss-Prot
	ENSRNOT00000084012	ENTREZGENE
	ENSRNOT00000117693	ENTREZGENE
	ENSRNOT00000136987	ENTREZGENE
Gene3D-CATH	1.10.220.150	UniProtKB/Swiss-Prot
	1.25.40.20	UniProtKB/Swiss-Prot
	2.30.29.30	UniProtKB/Swiss-Prot
	3.40.50.300	UniProtKB/Swiss-Prot
InterPro	Ankyrin_rpt	UniProtKB/Swiss-Prot
	Ankyrin_rpt-contain_sf	UniProtKB/Swiss-Prot
	Arf-GAP_GTPase_ANK_PH	UniProtKB/Swiss-Prot
	ARFGAP/RecO	UniProtKB/Swiss-Prot
	ArfGAP_dom	UniProtKB/Swiss-Prot
	ArfGAP_dom_sf	UniProtKB/Swiss-Prot
	P-loop_NTPase	UniProtKB/Swiss-Prot
	PH-like_dom_sf	UniProtKB/Swiss-Prot
	PH_domain	UniProtKB/Swiss-Prot
	Small_GTPase	UniProtKB/Swiss-Prot
KEGG Report	rno:65218	UniProtKB/Swiss-Prot
NCBI Gene	65218	ENTREZGENE
PANTHER	ARF-GAP WITH GTPASE, ANK REPEAT AND PH DOMAIN-CONTAINING PROTEIN 2	UniProtKB/Swiss-Prot
	CENTAURIN-GAMMA-1A	UniProtKB/Swiss-Prot
Pfam	Ank_2	UniProtKB/Swiss-Prot
	ArfGap	UniProtKB/Swiss-Prot
	Ras	UniProtKB/Swiss-Prot
PhenoGen	Agap2	PhenoGen
PRINTS	REVINTRACTNG	UniProtKB/Swiss-Prot
PROSITE	ANK_REP_REGION	UniProtKB/Swiss-Prot
	ANK_REPEAT	UniProtKB/Swiss-Prot
	ARFGAP	UniProtKB/Swiss-Prot
	GLD	UniProtKB/Swiss-Prot
	PH_DOMAIN	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000025584	RatGTEx
SMART	ArfGap	UniProtKB/Swiss-Prot
	RAB	UniProtKB/Swiss-Prot
	RAS	UniProtKB/Swiss-Prot
	SM00233	UniProtKB/Swiss-Prot
Superfamily-SCOP	PH domain-like	UniProtKB/Swiss-Prot
	SSF48403	UniProtKB/Swiss-Prot
	SSF52540	UniProtKB/Swiss-Prot
	SSF57863	UniProtKB/Swiss-Prot
UniProt	A0A0G2JVS4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AM98	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0LZX2_RAT	UniProtKB/TrEMBL
	A6HQS4	ENTREZGENE, UniProtKB/TrEMBL
	AGAP2_RAT	UniProtKB/Swiss-Prot, ENTREZGENE
	Q9JHW8	ENTREZGENE
UniProt Secondary	Q9JHW8	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-10-15	Agap2	ArfGAP with GTPase domain, ankyrin repeat and PH domain 2	Centg1	centaurin, gamma 1	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2003-04-09	Centg1	centaurin, gamma 1			Symbol and Name updated	629477	APPROVED
2003-03-06	Centg1	centaurin, gamma 1	Pike	nuclear GTPase PIKE	Data merged from RGD:620459	628472	PROVISIONAL
2003-02-27	Centg1	centaurin, gamma 1			Symbol and Name status set to provisional	70820	PROVISIONAL
2002-08-07	Pike	nuclear GTPase PIKE			Symbol and Name status set to provisional	70820	PROVISIONAL

RGD Curation Notes

Note Type	Note	Reference
gene_process	enhances PI3kinase activity	632423
gene_protein	753 amino acid	632423

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message

Imported Annotations - KEGG (archival)