Npy (neuropeptide Y) - Rat Genome Database

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Gene: Npy (neuropeptide Y) Rattus norvegicus
Analyze
Symbol: Npy
Name: neuropeptide Y
RGD ID: 3197
Description: Enables neuropeptide Y receptor binding activity. Involved in several processes, including adult feeding behavior; positive regulation of ERK1 and ERK2 cascade; and positive regulation of metabolic process. Located in several cellular components, including perikaryon; perinuclear region of cytoplasm; and terminal bouton. Is active in neuronal dense core vesicle. Used to study absence epilepsy; alcohol use disorder; depressive disorder; and hypertension. Biomarker of several diseases, including cerebral infarction; median neuropathy; neurodegenerative disease (multiple); obesity; and status epilepticus. Human ortholog(s) of this gene implicated in several diseases, including Huntington's disease; alcohol dependence; alcohol use disorder; artery disease (multiple); and epilepsy (multiple). Orthologous to human NPY (neuropeptide Y); PARTICIPATES IN neuropeptide Y metabolic pathway; INTERACTS WITH (+)-pilocarpine; (S)-amphetamine; (S)-nicotine.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: LOC100912228; NPY02; pro-neuropeptide Y; pro-neuropeptide Y-like; RATNPY; RATNPY02
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: Npyem6Sage  
Genetic Models: iNP-Npyem6Sage/Iusm iNP-Npyem6Sage-/-/Iusm iNP-Npyem6Sage+/-/Iusm
Is Marker For: Strains:   SHR.BN-(Il6-Npy)   iP/Iusm   iNP/Iusm   BB.SHR-(D4Mit6-Spr)/K   NP.P-(D4Rat119-D4Rat55)/Iusm  
QTLs:   Bp21   Bp135  
Candidate Gene For: Eau1 Scwia1 Aia3 Alc18 Bp79 Sach4 Alc16 Alc14 Bw40 Alc21 Alc22 Bp330 Bw126
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8480,212,111 - 80,219,310 (+)NCBIGRCr8
mRatBN7.2478,881,294 - 78,888,495 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl478,881,264 - 78,888,495 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx484,098,422 - 84,105,619 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0479,873,911 - 79,881,112 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0478,314,242 - 78,321,437 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0479,557,856 - 79,565,059 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl479,573,998 - 79,581,208 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl479,557,854 - 79,565,097 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04144,233,753 - 144,240,956 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4478,038,013 - 78,045,187 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1478,314,142 - 78,321,317 (+)NCBI
Celera473,795,148 - 73,802,371 (+)NCBICelera
RH 3.4 Map4508.6RGD
RH 3.4 Map4507.8RGD
Cytogenetic Map4q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


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Object Symbol
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Original Reference(s)
NpyRatabsence epilepsy treatmentIDA 10448964 RGD 
NpyRatabsence epilepsy treatmentISONPY (Homo sapiens)10448963 RGD 
NpyRatAIDS Dementia Complex severityISONPY (Homo sapiens)10431910protein:increased expression:cerebrospinal fluidRGD 
NpyRatalcohol dependence susceptibilityISONPY (Homo sapiens)401976551DNA:SNP:cd: p.L7P (rs16139) (human)RGD 
NpyRatalcohol use disorder  ISONPY (Homo sapiens)10430830DNA:missense mutation: :p.L7P (human)RGD 
NpyRatalcohol use disorder  IAGP 1357412DNA:deletion:intron:g.4666_4674del (rat)RGD 
NpyRatAlzheimer's disease  ISONPY (Homo sapiens)10432246protein:decreased expression:plasmaRGD 
NpyRatAlzheimer's disease treatmentIEP 10431479 RGD 
NpyRatAnorexia  IEP 10448965associated with NeoplasmsRGD 
NpyRatanxiety disorder susceptibilityISONPY (Homo sapiens)6480264DNA:SNPs and haplotypesRGD 
NpyRatarteriosclerosis  ISONPY (Homo sapiens)1580177DNA:missense mutation:cds:p.L7P (human)RGD 
NpyRatatherosclerosis severityISONpy (Mus musculus)10448273 RGD 
NpyRatBrain Injuries  IEP 10448961protein:increased expression:adrenal medullaRGD 
NpyRatCerebral Hemorrhage  IEP 1580182protein:increased expression:plasma (rat)RGD 
NpyRatcerebral infarction  IEP 10448931protein:increased expression:cerebral cortexRGD 
NpyRatcongestive heart failure  IEP 7175103 RGD 
NpyRatdementia  ISONPY (Homo sapiens)10433462associated with Parkinson Disease and protein:decreased expression:cerebral cortexRGD 
NpyRatdepressive disorder  ISONPY (Homo sapiens)1358535DNA:snp more ...RGD 
NpyRatdepressive disorder treatmentIDA 10448937 RGD 
NpyRatdepressive disorder  IEP 10448940mRNA:decreased expression:hippocampus and prefrontal cortex RGD 
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Original Reference(s)
NpyRatpleomorphic xanthoastrocytoma  ISONPY (Homo sapiens)8554872ClinVar Annotator: match by term: Pleomorphic xanthoastrocytomaClinVarPMID:28299358
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Original Reference(s)
NpyRatalcohol use disorder  ISONPY (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:17572454
NpyRatAlzheimer's disease  ISONPY (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:11709213
NpyRatAnorexia  ISONPY (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:16084549 more ...
NpyRatanxiety disorder  ISONPY (Homo sapiens)11554173CTD Direct Evidence: therapeuticCTDPMID:11440811
NpyRatasthma  ISONPY (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:9731035
NpyRatcardiovascular system disease  ISONPY (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:9812770
NpyRatcerebral infarction  ISONPY (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:11821007
NpyRatChronic Bronchitis  ISONPY (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:9731035
NpyRatCocaine-Related Disorders  ISONPY (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:19063928
NpyRatdepressive disorder  ISONPY (Homo sapiens)11554173CTD more ...CTDPMID:9729278 and PMID:17572454
NpyRatepilepsy  ISONPY (Homo sapiens)11554173CTD Direct Evidence: therapeuticCTDPMID:8868293 and PMID:20064661
NpyRatHyperkinesis  ISONPY (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:19063928
NpyRatHypertrophy  ISONPY (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:9812770
NpyRatMemory Disorders  ISONPY (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:2611661
NpyRatMuscle Rigidity  ISONPY (Homo sapiens)11554173CTD Direct Evidence: therapeuticCTDPMID:10675796
NpyRatNasal Obstruction  ISONPY (Homo sapiens)11554173CTD Direct Evidence: therapeuticCTDPMID:9288221
NpyRatNeurobehavioral Manifestations  ISONPY (Homo sapiens)11554173CTD Direct Evidence: therapeuticCTDPMID:32956829
NpyRatperipheral nervous system disease  ISONPY (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:17686523
NpyRatrhinitis  ISONPY (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:12746121
NpyRatsubstance-related disorder  ISONPY (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:19063928
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Original Reference(s)
NpyRat(+)-pilocarpine decreases response to substanceISONpy (Mus musculus)6480464NPY protein results in decreased susceptibility to PilocarpineCTDPMID:15451008
NpyRat(+)-pilocarpine increases expressionEXP 6480464Pilocarpine results in increased expression of NPY proteinCTDPMID:12231234
NpyRat(+)-pilocarpine increases expressionISONpy (Mus musculus)6480464Pilocarpine results in increased expression of NPY proteinCTDPMID:12821374
NpyRat(R)-noradrenaline affects response to substanceISONPY (Homo sapiens)6480464NPY protein affects the susceptibility to NorepinephrineCTDPMID:15003356
NpyRat(S)-amphetamine decreases expressionEXP 6480464Dextroamphetamine results in decreased expression of NPY mRNA and Dextroamphetamine results in decreased expression of NPY proteinCTDPMID:19497417
NpyRat(S)-nicotine decreases expressionEXP 6480464Nicotine results in decreased expression of NPY proteinCTDPMID:33091441
NpyRat(S)-nicotine multiple interactionsEXP 6480464Hexamethonium inhibits the reaction [Nicotine results in increased expression of NPY mRNA]CTDPMID:2233698
NpyRat(S)-nicotine increases expressionEXP 6480464Nicotine results in increased expression of NPY mRNA and Nicotine results in increased expression of NPY proteinCTDPMID:1907749 more ...
NpyRat1,2-dichloroethane decreases expressionISONpy (Mus musculus)6480464ethylene dichloride results in decreased expression of NPY mRNACTDPMID:28960355
NpyRat1,3,5-trinitro-1,3,5-triazinane increases expressionEXP 6480464cyclonite results in increased expression of NPY mRNACTDPMID:25559034
NpyRat17alpha-ethynylestradiol decreases expressionISONpy (Mus musculus)6480464Ethinyl Estradiol results in decreased expression of NPY mRNACTDPMID:29112739
NpyRat17alpha-ethynylestradiol multiple interactionsISONpy (Mus musculus)6480464ESR1 gene mutant form inhibits the reaction [Ethinyl Estradiol results in decreased expression of NPY mRNA]CTDPMID:29112739
NpyRat17beta-estradiol decreases expressionISONpy (Mus musculus)6480464Estradiol results in decreased expression of NPY mRNACTDPMID:30524225
NpyRat17beta-estradiol decreases expressionEXP 6480464Estradiol results in decreased expression of NPY mRNACTDPMID:32145629
NpyRat2,2',4,4'-Tetrabromodiphenyl ether multiple interactionsISONpy (Mus musculus)6480464ESR1 gene mutant form inhibits the reaction [2 more ...CTDPMID:29112739
NpyRat2,2',4,4'-Tetrabromodiphenyl ether decreases expressionISONpy (Mus musculus)64804642 more ...CTDPMID:29112739
NpyRat2,3,7,8-tetrachlorodibenzodioxine decreases expressionISONpy (Mus musculus)6480464Tetrachlorodibenzodioxin results in decreased expression of NPY mRNACTDPMID:19465110
NpyRat2,3,7,8-tetrachlorodibenzodioxine affects expressionISONpy (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of NPY mRNACTDPMID:24680724
NpyRat2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of NPY mRNACTDPMID:15093705 and PMID:23871856
NpyRat2,3,7,8-tetrachlorodibenzodioxine affects expressionEXP 6480464Tetrachlorodibenzodioxin affects the expression of NPY mRNACTDPMID:15977195 and PMID:22298810

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Biological Process
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Original Reference(s)
NpyRatadult feeding behavior involved_inIDA 8554847PMID:9590691HGNC-UCL 
NpyRatantimicrobial humoral immune response mediated by antimicrobial peptide involved_inISONPY (Homo sapiens) and UniProtKB:P01303-PRO_00000253211624291 PMID:18603306RGDPMID:18603306
NpyRatcentral nervous system neuron development involved_inIEAUniProtKB:P01303 and ensembl:ENSP000002421521600115GO_REF:0000107EnsemblGO_REF:0000107
NpyRatcentral nervous system neuron development involved_inISONPY (Homo sapiens)1624291 PMID:20846339RGDPMID:20846339
NpyRatcerebral cortex development involved_inIEAUniProtKB:P01303 and ensembl:ENSP000002421521600115GO_REF:0000107EnsemblGO_REF:0000107
NpyRatcerebral cortex development involved_inISONPY (Homo sapiens)1624291 PMID:9067840RGDPMID:9067840
NpyRatchemical synaptic transmission  IDA 628512 RGD 
NpyRatfeeding behavior involved_inIBAMGI:99924 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
NpyRatinnate immune response involved_inISONPY (Homo sapiens) and UniProtKB:P01303-PRO_00000253211624291 PMID:18603306RGDPMID:18603306
NpyRatmonocyte activation  IDA 1580787 RGD 
NpyRatnegative regulation of acute inflammatory response to antigenic stimulus  IDA 10448932 RGD 
NpyRatnegative regulation of blood pressure  IMP 1357410 RGD 
NpyRatnegative regulation of cellular process  IDA 10448933primary cortical neuron deathRGD 
NpyRatnegative regulation of somatostatin secretion involved_inISONPY (Sus scrofa) and UniProtKB:P01304-PRO_00000253271624291 PMID:8837218RGDPMID:8837218
NpyRatneuron projection development involved_inIEAUniProtKB:P01303 and ensembl:ENSP000002421521600115GO_REF:0000107EnsemblGO_REF:0000107
NpyRatneuron projection development involved_inISONPY (Homo sapiens)1624291 PMID:20846339RGDPMID:20846339
NpyRatneuropeptide signaling pathway  IMP 1580180 RGD 
NpyRatneuropeptide signaling pathway involved_inIEAUniProtKB-KW:KW-05271600115GO_REF:0000043UniProtGO_REF:0000043
NpyRatneuropeptide signaling pathway involved_inIBAPANTHER:PTN000056513 and Npy (Rattus norvegicus)1600115GO_REF:0000033GO_CentralGO_REF:0000033
NpyRatneuropeptide signaling pathway  IMP 1580181 RGD 
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Cellular Component
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Original Reference(s)
NpyRatcytoplasm located_inIEAUniProtKB:P57774 and ensembl:ENSMUSP000000318431600115GO_REF:0000107EnsemblGO_REF:0000107
NpyRatcytoplasm located_inISONpy (Mus musculus)1624291 PMID:24582971RGDPMID:24582971
NpyRatcytoplasmic vesicle located_inIEAUniProtKB-KW:KW-09681600115GO_REF:0000043UniProtGO_REF:0000043
NpyRatextracellular region located_inIEAUniProtKB-SubCell:SL-02431600115GO_REF:0000044UniProtGO_REF:0000044
NpyRatextracellular region located_inIEAInterPro:IPR0019551600115GO_REF:0000002InterProGO_REF:0000002
NpyRatextracellular region located_inIEAUniProtKB-KW:KW-09641600115GO_REF:0000043UniProtGO_REF:0000043
NpyRatextracellular space  IDA 10448941 RGD 
NpyRatextracellular space is_active_inIBAMGI:97753 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
NpyRatextracellular space located_inIDA 8554847PMID:9590691HGNC-UCL 
NpyRatGABA-ergic synapse is_active_inIEAUniProtKB:P57774 and ensembl:ENSMUSP000000318431600115GO_REF:0000107EnsemblGO_REF:0000107
NpyRatGABA-ergic synapse is_active_inISONpy (Mus musculus)1624291 PMID:22190627RGDPMID:22190627
NpyRatGolgi apparatus located_inISONPY (Homo sapiens)1624291 RGDGO_REF:0000052
NpyRatGolgi apparatus located_inIEAUniProtKB:A4D158 and ensembl:ENSP000002421521600115GO_REF:0000107EnsemblGO_REF:0000107
NpyRatGolgi apparatus located_inIEAUniProtKB:P01303 and ensembl:ENSP000002421521600115GO_REF:0000107EnsemblGO_REF:0000107
NpyRatneuronal dense core vesicle located_inIDA 15023486PMID:29166604UniProt 
NpyRatneuronal dense core vesicle located_inIEAUniProtKB-SubCell:SL-05261600115GO_REF:0000044UniProtGO_REF:0000044
NpyRatneuronal dense core vesicle is_active_inIDA 155230710PMID:29775703SynGO 
NpyRatneuronal dense core vesicle located_inIDA 14995321PMID:30021165UniProt 
NpyRatperikaryon  IDA 10448936 RGD 
NpyRatperinuclear region of cytoplasm  IDA 10448941 RGD 
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Molecular Function

  

RGD Manual Annotations


  
Object Symbol
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Original Reference(s)
NpyRatneuropeptide Y metabolic pathway  TAS 1580178 RGD 
Object Symbol
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Reference
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Original Reference(s)
NpyRatalcohol preference  IAGP 11530013as compared to NP/IusmRGD 
NpyRatdecreased body weight  IAGP 11530013as compared to NP/IusmRGD 
NpyRatincreased alcohol consumption  IAGP 11530013as compared to NP/IusmRGD 

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#
Reference Title
Reference Citation
1. NPY in rat retina is present in neurons, in endothelial cells and also in microglial and Muller cells. Alvaro AR, etal., Neurochem Int. 2007 Apr;50(5):757-63. Epub 2007 Feb 8.
2. Differential modulation of synaptic transmission by neuropeptide Y in rat neocortical neurons. Bacci A, etal., Proc Natl Acad Sci U S A 2002 Dec 24;99(26):17125-30.
3. Chronic quinolinic acid lesions in rats closely resemble Huntington's disease. Beal MF, etal., J Neurosci. 1991 Jun;11(6):1649-59.
4. Somatostatin and neuropeptide Y immunoreactivity in Parkinson's disease dementia with Alzheimer's changes. Beal MF, etal., Synapse. 1988;2(4):463-7.
5. NPY modulates epinephrine-induced leukocytosis via Y-1 and Y-5 receptor activation in vivo: sympathetic co-transmission during leukocyte mobilization. Bedoui S, etal., J Neuroimmunol 2002 Nov;132(1-2):25-33.
6. Capture of Dense Core Vesicles at Synapses by JNK-Dependent Phosphorylation of Synaptotagmin-4. Bharat V, etal., Cell Rep. 2017 Nov 21;21(8):2118-2133. doi: 10.1016/j.celrep.2017.10.084.
7. The antidepressant effects of running and escitalopram are associated with levels of hippocampal NPY and Y1 receptor but not cell proliferation in a rat model of depression. Bjornebekk A, etal., Hippocampus. 2010 Jul;20(7):820-8. doi: 10.1002/hipo.20683.
8. Nerve stimulation induced overflow of neuropeptide Y and modulation by angiotensin II in spontaneously hypertensive rats. Byku M, etal., Am J Physiol Heart Circ Physiol. 2008 Nov;295(5):H2188-97. doi: 10.1152/ajpheart.00384.2008. Epub 2008 Oct 3.
9. Renal and cardiac neuropeptide Y and NPY receptors in a rat model of congestive heart failure. Callanan EY, etal., Am J Physiol Renal Physiol. 2007 Dec;293(6):F1811-7. Epub 2007 Sep 5.
10. Hypothyroidism Induces Hypophagia Associated with Alterations in Protein Expression of Neuropeptide Y and Proopiomelanocortin in the Arcuate Nucleus, Independently of Hypothalamic Nuclei-Specific Changes in Leptin Signaling. Calvino C, etal., Thyroid. 2016 Jan;26(1):134-43. doi: 10.1089/thy.2015.0384. Epub 2015 Dec 1.
11. The feeding response to melanin-concentrating hormone is attenuated by antagonism of the NPY Y(1)-receptor in the rat. Chaffer CL and Morris MJ, Endocrinology 2002 Jan;143(1):191-7.
12. Alteration of NPY and Y1 receptor in dorsomedial and ventromedial areas of hypothalamus in anorectic tumor-bearing rats. Chance WT, etal., Peptides. 2007 Feb;28(2):295-301. Epub 2007 Jan 17.
13. Neuropeptide Y protects rat cortical neurons against beta-amyloid toxicity and re-establishes synthesis and release of nerve growth factor. Croce N, etal., ACS Chem Neurosci. 2012 Apr 18;3(4):312-8. doi: 10.1021/cn200127e. Epub 2012 Jan 30.
14. Urocortin I inhibits the effects of ghrelin and neuropeptide Y on feeding and energy substrate utilization. Currie PJ, etal., Brain Res. 2011 Apr 18;1385:127-34. doi: 10.1016/j.brainres.2011.01.114.
15. The anti-inflammatory effect of neuropeptide Y (NPY) in rats is dependent on dipeptidyl peptidase 4 (DP4) activity and age. Dimitrijevic M, etal., Peptides. 2008 Dec;29(12):2179-87. doi: 10.1016/j.peptides.2008.08.017. Epub 2008 Sep 3.
16. Support for involvement of glutamate decarboxylase 1 and neuropeptide y in anxiety susceptibility. Donner J, etal., Am J Med Genet B Neuropsychiatr Genet. 2012 Apr;159B(3):316-27. doi: 10.1002/ajmg.b.32029. Epub 2012 Feb 10.
17. The role of neuropeptide Y and aquaporin 4 in the pathogenesis of intestinal dysfunction caused by traumatic brain injury. Duan H, etal., J Surg Res. 2013 Oct;184(2):1006-12. doi: 10.1016/j.jss.2013.03.096. Epub 2013 Apr 18.
18. Endogenous neuropeptide Y prevents recurrence of experimental febrile seizures by increasing seizure threshold. Dube C, etal., J Mol Neurosci. 2005;25(3):275-84.
19. Long-term valproate treatment increases brain neuropeptide Y expression and decreases seizure expression in a genetic rat model of absence epilepsy. Elms J, etal., PLoS One. 2013 Sep 9;8(9):e73505. doi: 10.1371/journal.pone.0073505. eCollection 2013.
20. Neuropeptide Y1 and Y5 receptors mediate the effects of neuropeptide Y on the hypothalamic-pituitary-thyroid axis. Fekete C, etal., Endocrinology 2002 Dec;143(12):4513-9.
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PMID:2834371   PMID:3031663   PMID:3031687   PMID:3413293   PMID:8837218   PMID:9067840   PMID:9623984   PMID:9756788   PMID:10698177   PMID:11738809   PMID:11856342   PMID:11897270  
PMID:11914579   PMID:11932938   PMID:12030805   PMID:12069594   PMID:12093484   PMID:12429884   PMID:12450741   PMID:12450742   PMID:12576193   PMID:12590942   PMID:12686755   PMID:12727330  
PMID:12782392   PMID:12786976   PMID:12842868   PMID:12895522   PMID:12902638   PMID:12914981   PMID:12919938   PMID:14551170   PMID:14617575   PMID:15123022   PMID:15127943   PMID:15245875  
PMID:15567472   PMID:15576634   PMID:15582708   PMID:15618885   PMID:15619124   PMID:15652508   PMID:15680466   PMID:15716245   PMID:15716408   PMID:15789763   PMID:15926937   PMID:16051880  
PMID:16087729   PMID:16154634   PMID:16195495   PMID:16198490   PMID:16266747   PMID:16336998   PMID:16383008   PMID:16387449   PMID:16426702   PMID:16675522   PMID:16721031   PMID:16728494  
PMID:16867179   PMID:16888209   PMID:16965293   PMID:17011171   PMID:17023531   PMID:17081520   PMID:17154253   PMID:17289093   PMID:17388940   PMID:17400722   PMID:17462823   PMID:17464216  
PMID:17467917   PMID:17684035   PMID:17690163   PMID:17976913   PMID:17989139   PMID:18001323   PMID:18032527   PMID:18094253   PMID:18164503   PMID:18242853   PMID:18308474   PMID:18323405  
PMID:18331583   PMID:18384674   PMID:18389390   PMID:18467436   PMID:18502321   PMID:18504079   PMID:18535107   PMID:18539096   PMID:18544708   PMID:18573184   PMID:18573695   PMID:18588949  
PMID:18598846   PMID:18603306   PMID:18835268   PMID:18937973   PMID:18955035   PMID:19009650   PMID:19017729   PMID:19036961   PMID:19063928   PMID:19095023   PMID:19151514   PMID:19183337  
PMID:19211911   PMID:19229719   PMID:19255506   PMID:19295167   PMID:19383429   PMID:19497417   PMID:19553928   PMID:19559985   PMID:19609086   PMID:19620061   PMID:19671088   PMID:19817504  
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Npy
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8480,212,111 - 80,219,310 (+)NCBIGRCr8
mRatBN7.2478,881,294 - 78,888,495 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl478,881,264 - 78,888,495 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx484,098,422 - 84,105,619 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0479,873,911 - 79,881,112 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0478,314,242 - 78,321,437 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0479,557,856 - 79,565,059 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl479,573,998 - 79,581,208 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl479,557,854 - 79,565,097 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04144,233,753 - 144,240,956 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4478,038,013 - 78,045,187 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1478,314,142 - 78,321,317 (+)NCBI
Celera473,795,148 - 73,802,371 (+)NCBICelera
RH 3.4 Map4508.6RGD
RH 3.4 Map4507.8RGD
Cytogenetic Map4q24NCBI
NPY
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38724,284,190 - 24,291,862 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl724,284,188 - 24,291,862 (+)EnsemblGRCh38hg38GRCh38
GRCh37724,323,809 - 24,331,481 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36724,290,334 - 24,298,002 (+)NCBINCBI36Build 36hg18NCBI36
Build 34724,097,048 - 24,104,717NCBI
Celera724,312,617 - 24,320,302 (+)NCBICelera
Cytogenetic Map7p15.3NCBI
HuRef724,208,802 - 24,216,490 (+)NCBIHuRef
CHM1_1724,325,406 - 24,333,092 (+)NCBICHM1_1
T2T-CHM13v2.0724,422,184 - 24,429,876 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v2724,375,683 - 24,383,371 (+)NCBI
Npy
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39649,799,690 - 49,806,487 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl649,799,690 - 49,806,487 (+)EnsemblGRCm39 Ensembl
GRCm38649,822,710 - 49,829,507 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl649,822,710 - 49,829,507 (+)EnsemblGRCm38mm10GRCm38
MGSCv37649,772,728 - 49,779,506 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36649,752,315 - 49,759,093 (+)NCBIMGSCv36mm8
Celera650,334,213 - 50,340,981 (+)NCBICelera
Cytogenetic Map6B2.3NCBI
cM Map624.04NCBI
Npy
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541026,348,504 - 26,355,297 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541026,348,388 - 26,355,232 (+)NCBIChiLan1.0ChiLan1.0
NPY
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2629,145,106 - 29,152,854 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1777,469,833 - 77,477,581 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0724,963,056 - 24,970,803 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1724,566,963 - 24,574,657 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl724,568,041 - 24,574,657 (+)Ensemblpanpan1.1panPan2
NPY
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11437,824,579 - 37,831,289 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1437,823,861 - 37,831,443 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1437,373,133 - 37,380,851 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01437,758,052 - 37,765,788 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1437,758,938 - 37,765,943 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11437,872,113 - 37,879,841 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01437,564,477 - 37,572,202 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01437,908,665 - 37,916,390 (+)NCBIUU_Cfam_GSD_1.0
Npy
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511882,077,623 - 82,085,085 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364781,290,505 - 1,296,874 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364781,289,437 - 1,296,819 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NPY
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1847,985,725 - 47,992,667 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11847,985,796 - 47,993,726 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21852,929,745 - 52,937,666 (-)NCBISscrofa10.2Sscrofa10.2susScr3
NPY
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12134,068,533 - 34,076,205 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2134,068,530 - 34,075,127 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604270,564,869 - 70,572,551 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Npy
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247396,277,612 - 6,285,397 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247396,277,704 - 6,285,454 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in Npy
62 total Variants

Predicted Target Of
Summary Value
Count of predictions:127
Count of miRNA genes:106
Interacting mature miRNAs:110
Transcripts:ENSRNOT00000013145
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 62 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1358352Srcrt3Stress Responsive Cort QTL 32.29blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)438465774146803430Rat
1549843Bw53Body weight QTL 530.0001body mass (VT:0001259)body weight gain (CMO:0000420)461697658103194791Rat
61445Strs3Sensitivity to stroke QTL 33cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)44043338885433388Rat
6893678Bw108Body weight QTL 1082.60.006body mass (VT:0001259)body weight (CMO:0000012)44345797688457976Rat
10755501Bp390Blood pressure QTL 3902.5arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)426775591168368347Rat
1357342Bw40Body weight QTL 400.001body mass (VT:0001259)body weight (CMO:0000012)476647384117676292Rat
631556Bp135Blood pressure QTL 1350.017arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)478881294117676292Rat
1358363Sradr3Stress Responsive Adrenal Weight QTL 36.19adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)457486946102486946Rat
61330Eau1Experimental allergic uveoretinitis QTL 10.0003uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)470362013132642728Rat
70167Bw22Body weight QTL 223.1body mass (VT:0001259)body weight (CMO:0000012)476647384117676292Rat

1 to 10 of 62 rows
D4Wox21  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8480,213,634 - 80,213,769 (+)Marker Load Pipeline
mRatBN7.2478,882,817 - 78,882,954 (+)MAPPERmRatBN7.2
Rnor_6.0479,575,534 - 79,575,667NCBIRnor6.0
Rnor_6.0479,559,380 - 79,559,514NCBIRnor6.0
Rnor_5.04144,235,277 - 144,235,411UniSTSRnor5.0
Rnor_5.04144,249,326 - 144,249,459UniSTSRnor5.0
RGSC_v3.4478,039,510 - 78,039,646UniSTSRGSC3.4
RGSC_v3.4478,039,509 - 78,039,646RGDRGSC3.4
RGSC_v3.1478,315,639 - 78,315,776RGD
Celera473,796,672 - 73,796,816UniSTS
RH 3.4 Map4504.2UniSTS
RH 3.4 Map4504.2RGD
RH 2.0 Map4547.5RGD
Cytogenetic Map4q24UniSTS
D4Hri1  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8480,213,634 - 80,213,760 (+)Marker Load Pipeline
mRatBN7.2478,882,817 - 78,882,945 (+)MAPPERmRatBN7.2
Rnor_6.0479,575,534 - 79,575,658NCBIRnor6.0
Rnor_6.0479,559,380 - 79,559,505NCBIRnor6.0
Rnor_5.04144,235,277 - 144,235,402UniSTSRnor5.0
Rnor_5.04144,249,326 - 144,249,450UniSTSRnor5.0
RGSC_v3.4478,039,510 - 78,039,637UniSTSRGSC3.4
RGSC_v3.4478,039,509 - 78,039,637RGDRGSC3.4
Celera473,796,672 - 73,796,807UniSTS
Cytogenetic Map4q24UniSTS
D4Mgh4  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2478,878,504 - 78,878,711 (+)MAPPERmRatBN7.2
Rnor_6.0479,570,971 - 79,571,177NCBIRnor6.0
Rnor_6.0479,555,067 - 79,555,273NCBIRnor6.0
Rnor_5.04144,230,964 - 144,231,170UniSTSRnor5.0
Rnor_5.04144,244,763 - 144,244,969UniSTSRnor5.0
RGSC_v3.4478,035,196 - 78,035,403RGDRGSC3.4
RGSC_v3.4478,035,197 - 78,035,403UniSTSRGSC3.4
RGSC_v3.1478,311,326 - 78,311,533RGD
Celera473,792,358 - 73,792,564UniSTS
RH 3.4 Map4504.3UniSTS
RH 3.4 Map4504.3RGD
RH 2.0 Map4551.7RGD
SHRSP x BN Map437.38RGD
FHH x ACI Map446.9099RGD
Cytogenetic Map4q24UniSTS
D4Wox22  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8480,216,804 - 80,216,952 (+)Marker Load Pipeline
mRatBN7.2478,885,989 - 78,886,137 (+)MAPPERmRatBN7.2
Rnor_6.0479,578,703 - 79,578,854NCBIRnor6.0
Rnor_6.0479,562,550 - 79,562,701NCBIRnor6.0
Rnor_5.04144,238,447 - 144,238,598UniSTSRnor5.0
Rnor_5.04144,252,495 - 144,252,646UniSTSRnor5.0
RGSC_v3.4478,042,682 - 78,042,833UniSTSRGSC3.4
RGSC_v3.4478,042,681 - 78,042,833RGDRGSC3.4
RGSC_v3.1478,318,811 - 78,318,963RGD
Celera473,799,852 - 73,800,013UniSTS
RH 3.4 Map4508.4UniSTS
RH 3.4 Map4508.4RGD
RH 2.0 Map4543.9RGD
Cytogenetic Map4q24UniSTS
D4Arb7  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8480,216,682 - 80,216,972 (+)Marker Load Pipeline
mRatBN7.2478,885,867 - 78,886,157 (+)MAPPERmRatBN7.2
Rnor_6.0479,562,428 - 79,562,721NCBIRnor6.0
Rnor_6.0479,578,581 - 79,578,874NCBIRnor6.0
Rnor_5.04144,252,373 - 144,252,666UniSTSRnor5.0
Rnor_5.04144,238,325 - 144,238,618UniSTSRnor5.0
RGSC_v3.4478,042,559 - 78,042,853RGDRGSC3.4
RGSC_v3.4478,042,560 - 78,042,853UniSTSRGSC3.4
RGSC_v3.1478,318,689 - 78,318,983RGD
Celera473,799,730 - 73,800,033UniSTS
FHH x ACI Map446.9099RGD
FHH x ACI Map446.9099UniSTS
Cytogenetic Map4q24UniSTS
D4Mit7  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8480,216,705 - 80,217,004 (+)Marker Load Pipeline
mRatBN7.2478,885,890 - 78,886,189 (+)MAPPERmRatBN7.2
Rnor_6.0479,562,451 - 79,562,753RGDRnor6.0
D4Mit24  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2478,882,815 - 78,882,945 (+)MAPPERmRatBN7.2
Rnor_6.0479,575,532 - 79,575,658NCBIRnor6.0
Rnor_6.0479,559,378 - 79,559,505NCBIRnor6.0
Rnor_5.04144,235,275 - 144,235,402UniSTSRnor5.0
Rnor_5.04144,249,324 - 144,249,450UniSTSRnor5.0
RGSC_v3.4478,039,507 - 78,039,637RGDRGSC3.4
RGSC_v3.4478,039,508 - 78,039,637UniSTSRGSC3.4
RGSC_v3.1478,315,637 - 78,315,767RGD
Celera473,796,670 - 73,796,807UniSTS
RH 3.4 Map4500.0RGD
RH 3.4 Map4500.0UniSTS
RH 2.0 Map4554.5RGD
Cytogenetic Map4q24UniSTS
D4Arb35  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8480,213,632 - 80,213,779 (+)Marker Load Pipeline
mRatBN7.2478,882,815 - 78,882,964 (+)MAPPERmRatBN7.2
Rnor_6.0479,559,378 - 79,559,524NCBIRnor6.0
Rnor_6.0479,575,532 - 79,575,677NCBIRnor6.0
Rnor_5.04144,249,324 - 144,249,469UniSTSRnor5.0
Rnor_5.04144,235,275 - 144,235,421UniSTSRnor5.0
RGSC_v3.4478,039,507 - 78,039,656RGDRGSC3.4
RGSC_v3.4478,039,508 - 78,039,656UniSTSRGSC3.4
RGSC_v3.1478,315,637 - 78,315,786RGD
Celera473,796,670 - 73,796,826UniSTS
FHH x ACI Map446.34RGD
FHH x ACI Map446.34UniSTS
Cytogenetic Map4q24UniSTS
D14Mit29  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8480,216,705 - 80,217,004 (+)Marker Load Pipeline
mRatBN7.2478,885,890 - 78,886,189 (+)MAPPERmRatBN7.2
Rnor_6.0479,562,451 - 79,562,753NCBIRnor6.0
Rnor_6.0479,578,604 - 79,578,906NCBIRnor6.0
Rnor_5.04144,252,396 - 144,252,698UniSTSRnor5.0
Rnor_5.04144,238,348 - 144,238,650UniSTSRnor5.0
RGSC_v3.4478,042,583 - 78,042,885UniSTSRGSC3.4
Celera473,799,753 - 73,800,065UniSTS
Cytogenetic Map4q24UniSTS
RH94804  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2478,886,166 - 78,886,421 (+)MAPPERmRatBN7.2
Rnor_6.0479,578,884 - 79,579,138NCBIRnor6.0
Rnor_6.0479,562,731 - 79,562,985NCBIRnor6.0
Rnor_5.04144,252,676 - 144,252,930UniSTSRnor5.0
Rnor_5.04144,238,628 - 144,238,882UniSTSRnor5.0
RGSC_v3.4478,042,863 - 78,043,117UniSTSRGSC3.4
Celera473,800,043 - 73,800,297UniSTS
RH 3.4 Map4508.6UniSTS
Cytogenetic Map4q24UniSTS
D14Mit29.1  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2478,885,833 - 78,885,943 (+)MAPPERmRatBN7.2
Rnor_6.0479,578,547 - 79,578,656NCBIRnor6.0
Rnor_6.0479,562,394 - 79,562,503NCBIRnor6.0
Rnor_5.04144,238,291 - 144,238,400UniSTSRnor5.0
Rnor_5.04144,252,339 - 144,252,448UniSTSRnor5.0
RGSC_v3.4478,042,526 - 78,042,635UniSTSRGSC3.4
Celera473,799,696 - 73,799,805UniSTS
Cytogenetic Map4q24UniSTS
RH94574  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8480,219,176 - 80,219,275 (+)Marker Load Pipeline
mRatBN7.2478,888,361 - 78,888,460 (+)MAPPERmRatBN7.2
Rnor_6.0479,564,926 - 79,565,024NCBIRnor6.0
Rnor_6.0479,581,079 - 79,581,177NCBIRnor6.0
Rnor_5.04144,254,871 - 144,254,969UniSTSRnor5.0
Rnor_5.04144,240,823 - 144,240,921UniSTSRnor5.0
RGSC_v3.4478,045,058 - 78,045,156UniSTSRGSC3.4
Celera473,802,238 - 73,802,336UniSTS
Cytogenetic Map4q24UniSTS


The following Strains have been annotated to Npy


This gene Npy is modified in the following models/strains:




alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
12 12 77 67 59 35 13 35 12 113 49 53 17 28 24



Ensembl Acc Id: ENSRNOT00000013145   ⟹   ENSRNOP00000013146
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl479,557,854 - 79,565,097 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000074351   ⟹   ENSRNOP00000066713
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl478,881,264 - 78,888,495 (+)Ensembl
Rnor_6.0 Ensembl479,573,998 - 79,581,208 (+)Ensembl
RefSeq Acc Id: NM_012614   ⟹   NP_036746
RefSeq Status: REVIEWED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8480,212,111 - 80,219,310 (+)NCBI
mRatBN7.2478,881,294 - 78,888,495 (+)NCBI
Rnor_6.0479,557,856 - 79,565,059 (+)NCBI
Rnor_5.04144,233,753 - 144,240,956 (+)NCBI
RGSC_v3.4478,038,013 - 78,045,187 (+)RGD
Celera473,795,148 - 73,802,371 (+)NCBI
Sequence:
RefSeq Acc Id: NP_036746   ⟸   NM_012614
- Peptide Label: preproprotein
- UniProtKB: P07808 (UniProtKB/Swiss-Prot),   F2W8A6 (UniProtKB/TrEMBL),   M0RAZ3 (UniProtKB/TrEMBL),   F2W8A7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000013146   ⟸   ENSRNOT00000013145
Ensembl Acc Id: ENSRNOP00000066713   ⟸   ENSRNOT00000074351

Name Modeler Protein Id AA Range Protein Structure
AF-P07808-F1-model_v2 AlphaFold P07808 1-98 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13693045
Promoter ID:EPDNEW_R3565
Type:single initiation site
Name:Npy_1
Description:neuropeptide Y
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0479,574,024 - 79,574,084EPDNEW


1 to 27 of 27 rows
Database
Acc Id
Source(s)
BIND 133988
BioCyc Gene G2FUF-44903 BioCyc
Ensembl Genes ENSRNOG00000009768 Ensembl
  ENSRNOG00000046449 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000074351 ENTREZGENE
Gene3D-CATH 6.10.250.900 UniProtKB/Swiss-Prot
InterPro Pancreatic_hormone-like UniProtKB/Swiss-Prot
  Pancreatic_hormone-like_CS UniProtKB/Swiss-Prot
KEGG Report rno:24604 UniProtKB/Swiss-Prot
NCBI Gene 24604 ENTREZGENE
PANTHER PRO-NEUROPEPTIDE Y UniProtKB/Swiss-Prot
  PTHR10533 UniProtKB/Swiss-Prot
Pfam Hormone_3 UniProtKB/Swiss-Prot
PharmGKB NPY RGD
PhenoGen Npy PhenoGen
PRINTS PANCHORMONE UniProtKB/Swiss-Prot
PROSITE PANCREATIC_HORMONE_1 UniProtKB/Swiss-Prot
  PANCREATIC_HORMONE_2 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000009768 RatGTEx
  ENSRNOG00000046449 RatGTEx
SMART PAH UniProtKB/Swiss-Prot
TIGR TC232176
UniProt A0A8L2QXP1_RAT UniProtKB/TrEMBL
  F2W8A6 ENTREZGENE, UniProtKB/TrEMBL
  F2W8A7 ENTREZGENE, UniProtKB/TrEMBL
  M0RAZ3 ENTREZGENE
  NPY_RAT UniProtKB/Swiss-Prot, ENTREZGENE
1 to 27 of 27 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 Npy  neuropeptide Y  LOC100912228  pro-neuropeptide Y-like  Data merged from RGD:6487865 737654 PROVISIONAL
2012-07-05 LOC100912228  pro-neuropeptide Y-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2002-06-10 Npy  Neuropeptide Y      Symbol and Name status set to approved 70586 APPROVED

Note Type Note Reference
gene_expression present in the hypothalamus of obese rats, especially in the paraventricular nucleus 70437
gene_expression abundant in central and peripheral nervous system 628512
gene_expression expressed throughout nervous system; increased expression in brain areas undergoing seizures 628420
gene_function hypothalamic-derived neuropeptide 628420
gene_function hypothalamic-derived neuropeptide 628512
gene_function inhibitory neurotransmitter that controls blood pressure 1357410
gene_other exogenous Npy has long-lasting effects on postsynaptic current amplitude in neocortex 628420
gene_physical_interaction binds to G protein coupled pancreatic polypeptide (Pp) receptors Y1,Y2 and Y5 628420
gene_process regulates appetite 70437
gene_process activates G-protein coupled receptors 70437
gene_process may function as an endogenous antiepileptic agent 628512
gene_process involved in energy homeostasis 628420
gene_process may be involved in modulation of Ca2+ dependent GABA release onto pyramidal neurons 628420
gene_process involved in modulation of feeding behaviour, anxiety, memory consolidation, and regulation of blood pressure; may decrease excitatory postsynaptic current and increase monosynaptic inhibitory postsynaptic current 628420
gene_process mediates effects of leptin on energy homeostasis; may influence hypothalamic-pituitary-thyroid axis (HPT axis) 628420
gene_process mediates the control of stress and fear related behavior 1357416
gene_regulation decrease in hypothalamic NPY innervation observed in anorectic TB rats 727497
gene_transcript polymorphism at position +4666 defined by microsatellite marker D4Mit7, contributes to reduced levels of mRNA expression in brain regions of alcohol preferring (iP) rats 1357412