Iqgap1 (IQ motif containing GTPase activating protein 1) - Rat Genome Database

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Gene: Iqgap1 (IQ motif containing GTPase activating protein 1) Rattus norvegicus
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Symbol: Iqgap1
Name: IQ motif containing GTPase activating protein 1
RGD ID: 1311884
Description: Enables mitogen-activated protein kinase binding activity. Involved in several processes, including positive regulation of dendrite development; positive regulation of protein phosphorylation; and regulation of cell junction assembly. Located in cytoskeleton; focal adhesion; and growth cone. Part of protein-containing complex. Is active in postsynapse. Orthologous to human IQGAP1 (IQ motif containing GTPase activating protein 1); PARTICIPATES IN E-cadherin signaling pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; platelet-derived growth factor signaling pathway; INTERACTS WITH 1,1,1-trichloro-2,2-bis(4-hydroxyphenyl)ethane; 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC361598; ras GTPase-activating-like protein IQGAP1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81144,088,788 - 144,178,989 (-)NCBIGRCr8
mRatBN7.21134,679,581 - 134,769,776 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1134,679,586 - 134,769,755 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1142,588,968 - 142,679,115 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01149,758,382 - 149,848,532 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01142,676,568 - 142,767,383 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01142,525,041 - 142,615,673 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1142,525,046 - 142,615,673 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01143,476,882 - 143,567,395 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41136,552,358 - 136,642,545 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11136,631,848 - 136,722,691 (-)NCBI
Celera1126,734,261 - 126,824,269 (-)NCBICelera
Cytogenetic Map1q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
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Original Reference(s)
Iqgap1RatNeointima  ISOIqgap1 (Mus musculus)11049552associated with Vascular System InjuriesRGD 
Iqgap1RatVascular System Injuries  IEP 11049588 RGD 
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Original Reference(s)
Iqgap1RatBloom syndrome  ISOIQGAP1 (Homo sapiens)8554872ClinVar Annotator: match by term: Bloom syndromeClinVarPMID:17407155 and PMID:28492532
Iqgap1Ratcolorectal cancer  ISOIQGAP1 (Homo sapiens)8554872ClinVar Annotator: match by term: Familial colorectal cancerClinVarPMID:28492532
Iqgap1RatD-2-hydroxyglutaric aciduria 2  ISOIQGAP1 (Homo sapiens)8554872ClinVar Annotator: match by term: D-2-hydroxyglutaric aciduria 2ClinVarPMID:17407155 and PMID:28492532
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Original Reference(s)
Iqgap1RatBrain Neoplasms  ISOIQGAP1 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:27935819
Iqgap1RatExperimental Liver Cirrhosis  ISOIQGAP1 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:25380136
Iqgap1Rathepatocellular carcinoma  ISOIQGAP1 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:20977743
Iqgap1RatWeight Gain  ISOIQGAP1 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:19030233

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Original Reference(s)
Iqgap1Rat(1->4)-beta-D-glucan multiple interactionsISOIqgap1 (Mus musculus)6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of IQGAP1 mRNACTDPMID:36331819
Iqgap1Rat1,1,1-trichloro-2,2-bis(4-hydroxyphenyl)ethane multiple interactionsEXP 64804642 more ...CTDPMID:19414516
Iqgap1Rat1,2-dimethylhydrazine multiple interactionsISOIqgap1 (Mus musculus)6480464[1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in decreased expression of IQGAP1 mRNACTDPMID:22206623
Iqgap1Rat1-chloro-2,4-dinitrobenzene affects bindingISOIQGAP1 (Homo sapiens)6480464Dinitrochlorobenzene binds to IQGAP1 proteinCTDPMID:32991956
Iqgap1Rat1-naphthyl isothiocyanate increases expressionEXP 64804641-Naphthylisothiocyanate results in increased expression of IQGAP1 mRNACTDPMID:25380136
Iqgap1Rat17beta-estradiol increases expressionISOIQGAP1 (Homo sapiens)6480464Estradiol results in increased expression of IQGAP1 mRNACTDPMID:16514628
Iqgap1Rat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISOIQGAP1 (Homo sapiens)6480464Cycloheximide inhibits the reaction [Tetrachlorodibenzodioxin results in increased expression of IQGAP1 mRNA]CTDPMID:11007951
Iqgap1Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of IQGAP1 mRNACTDPMID:33387578 and PMID:34747641
Iqgap1Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of IQGAP1 mRNACTDPMID:32109520
Iqgap1Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionISOIqgap1 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of IQGAP1 mRNACTDPMID:21570461
Iqgap1Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionISOIqgap1 (Mus musculus)6480464Tetrachlorodibenzodioxin results in increased expression of IQGAP1 mRNACTDPMID:19770486
Iqgap1Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionISOIQGAP1 (Homo sapiens)6480464Tetrachlorodibenzodioxin results in increased expression of IQGAP1 mRNACTDPMID:11007951 and PMID:12377990
Iqgap1Rat2,6-dimethoxyphenol multiple interactionsISOIQGAP1 (Homo sapiens)6480464[Furaldehyde co-treated with pyrogallol 1 more ...CTDPMID:38598786
Iqgap1Rat2-amino-14,16-dimethyloctadecan-3-ol decreases expressionISOIQGAP1 (Homo sapiens)64804642-amino-14 and 16-dimethyloctadecan-3-ol results in decreased expression of IQGAP1 proteinCTDPMID:32044396
Iqgap1Rat3',5'-cyclic AMP multiple interactionsEXP 64804642 more ...CTDPMID:19414516
Iqgap1Rat3-chloropropane-1,2-diol decreases expressionEXP 6480464alpha-Chlorohydrin results in decreased expression of IQGAP1 mRNACTDPMID:28522335
Iqgap1Rat4,4'-diaminodiphenylmethane increases expressionEXP 64804644 and 4'-diaminodiphenylmethane results in increased expression of IQGAP1 mRNACTDPMID:25380136
Iqgap1Rat4,4'-sulfonyldiphenol decreases expressionISOIqgap1 (Mus musculus)6480464bisphenol S results in decreased expression of IQGAP1 mRNACTDPMID:39298647
Iqgap1Rat6-propyl-2-thiouracil increases expressionEXP 6480464Propylthiouracil results in increased expression of IQGAP1 mRNACTDPMID:30047161
Iqgap1Ratacetamide increases expressionEXP 6480464acetamide results in increased expression of IQGAP1 mRNACTDPMID:31881176

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Biological Process
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Original Reference(s)
Iqgap1Ratcaveola assembly involved_inISOIqgap1 (Mus musculus)1624291 PMID:20951348RGDPMID:20951348
Iqgap1Ratcaveola assembly involved_inIEAUniProtKB:Q9JKF1 and ensembl:ENSMUSP000001282781600115GO_REF:0000107EnsemblGO_REF:0000107
Iqgap1Ratcell migration involved_inISOIQGAP1 (Homo sapiens)1624291 PMID:26242911RGDPMID:26242911
Iqgap1Ratcellular response to calcium ion involved_inISOIQGAP1 (Homo sapiens)1624291 PMID:18567582RGDPMID:18567582
Iqgap1Ratcellular response to epidermal growth factor stimulus involved_inISOIQGAP1 (Homo sapiens)1624291 PMID:17563371 and PMID:26242911RGDPMID:17563371 and PMID:26242911
Iqgap1Ratcellular response to epidermal growth factor stimulus involved_inIEAUniProtKB:Q9JKF1 and ensembl:ENSMUSP000001282781600115GO_REF:0000107EnsemblGO_REF:0000107
Iqgap1Ratcellular response to epidermal growth factor stimulus involved_inISOIqgap1 (Mus musculus)1624291 PMID:17563371RGDPMID:17563371
Iqgap1Ratcellular response to fibroblast growth factor stimulus involved_inISOIqgap1 (Mus musculus)1624291 PMID:17563371RGDPMID:17563371
Iqgap1Ratcellular response to fibroblast growth factor stimulus involved_inIEAUniProtKB:Q9JKF1 and ensembl:ENSMUSP000001282781600115GO_REF:0000107EnsemblGO_REF:0000107
Iqgap1Ratcellular response to platelet-derived growth factor stimulus involved_inIEAUniProtKB:Q9JKF1 and ensembl:ENSMUSP000001282781600115GO_REF:0000107EnsemblGO_REF:0000107
Iqgap1Ratcellular response to platelet-derived growth factor stimulus involved_inISOIqgap1 (Mus musculus)1624291 PMID:17563371RGDPMID:17563371
Iqgap1Ratepidermal growth factor receptor signaling pathway involved_inISOIQGAP1 (Homo sapiens)1624291 PMID:17563371 and PMID:18567582RGDPMID:17563371 and PMID:18567582
Iqgap1Ratepidermal growth factor receptor signaling pathway involved_inIEAUniProtKB:Q9JKF1 and ensembl:ENSMUSP000001282781600115GO_REF:0000107EnsemblGO_REF:0000107
Iqgap1Ratepidermal growth factor receptor signaling pathway involved_inISOIqgap1 (Mus musculus)1624291 PMID:17563371RGDPMID:17563371
Iqgap1Ratepidermal growth factor receptor signaling pathway involved_inIBAMGI:1352757 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Iqgap1Ratfibroblast growth factor receptor signaling pathway involved_inISOIqgap1 (Mus musculus)1624291 PMID:17563371RGDPMID:17563371
Iqgap1Ratfibroblast growth factor receptor signaling pathway involved_inIEAUniProtKB:Q9JKF1 and ensembl:ENSMUSP000001282781600115GO_REF:0000107EnsemblGO_REF:0000107
Iqgap1Ratfibroblast migration involved_inIBAMGI:1352757 and PANTHER:PTN0026803221600115GO_REF:0000033GO_CentralGO_REF:0000033
Iqgap1Ratfibroblast migration acts_upstream_of_or_withinIEAUniProtKB:Q9JKF1 and ensembl:ENSMUSP000001282781600115GO_REF:0000107EnsemblGO_REF:0000107
Iqgap1Ratfibroblast migration acts_upstream_of_or_withinISOIqgap1 (Mus musculus)1624291MGI:1932697 PMID:24841562RGDPMID:24841562
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Cellular Component
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Original Reference(s)
Iqgap1Ratactin cytoskeleton located_inIDA 10047185PMID:15695813UniProt 
Iqgap1Ratapical plasma membrane located_inISOIqgap1 (Mus musculus)1624291 PMID:35601831RGDPMID:35601831
Iqgap1Ratapical plasma membrane located_inIEAUniProtKB:Q9JKF1 and ensembl:ENSMUSP000001282781600115GO_REF:0000107EnsemblGO_REF:0000107
Iqgap1Ratapical plasma membrane located_inISOIQGAP1 (Homo sapiens)1624291 PMID:35601831RGDPMID:35601831
Iqgap1Rataxon located_inIDA 10047185PMID:15695813UniProt 
Iqgap1Ratbasolateral plasma membrane located_inISOIqgap1 (Mus musculus)1624291 PMID:35601831RGDPMID:35601831
Iqgap1Ratbasolateral plasma membrane located_inIEAUniProtKB:Q9JKF1 and ensembl:ENSMUSP000001282781600115GO_REF:0000107EnsemblGO_REF:0000107
Iqgap1Ratcell cortex is_active_inIBACGD:CAL0000175167 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Iqgap1Ratcell leading edge located_inIEAUniProtKB:Q9JKF1 and ensembl:ENSMUSP000001282781600115GO_REF:0000107EnsemblGO_REF:0000107
Iqgap1Ratcell leading edge located_inISOIqgap1 (Mus musculus)1624291MGI:109520 PMID:16369480 and PMID:24841562RGDPMID:16369480 and PMID:24841562
Iqgap1Ratcell-cell junction located_inIEAUniProtKB:Q9JKF1 and ensembl:ENSMUSP000001282781600115GO_REF:0000107EnsemblGO_REF:0000107
Iqgap1Ratcell-cell junction located_inISOIqgap1 (Mus musculus)1624291 PMID:18604197RGDPMID:18604197
Iqgap1Ratcortical actin cytoskeleton located_inISOIqgap1 (Mus musculus)1624291PR:P46940 PMID:28089576RGDPMID:28089576
Iqgap1Ratcortical actin cytoskeleton located_inIEAUniProtKB:Q9JKF1 and ensembl:ENSMUSP000001282781600115GO_REF:0000107EnsemblGO_REF:0000107
Iqgap1Ratcytoplasm located_inISOIQGAP1 (Homo sapiens)1624291 PMID:25554515 and PMID:29033352RGDPMID:25554515 and PMID:29033352
Iqgap1Ratcytoplasm located_inIEAUniProtKB:Q9JKF1 and ensembl:ENSMUSP000001282781600115GO_REF:0000107EnsemblGO_REF:0000107
Iqgap1Ratcytoplasm located_inISOIqgap1 (Mus musculus)1624291 PMID:14516655 more ...RGDPMID:14516655 more ...
Iqgap1Ratcytoplasmic ribonucleoprotein granule located_inISOIQGAP1 (Homo sapiens)1624291 PMID:15121898RGDPMID:15121898
Iqgap1Ratcytoplasmic side of plasma membrane located_inISOIQGAP1 (Homo sapiens)1624291 PMID:22493426RGDPMID:22493426
Iqgap1Ratfocal adhesion located_inIDA 11049552 RGD 
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Molecular Function
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Original Reference(s)
Iqgap1Ratactin filament binding enablesIBAPANTHER:PTN000365541 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Iqgap1Ratcalcium ion binding enablesISOIQGAP1 (Homo sapiens)1624291 PMID:18567582RGDPMID:18567582
Iqgap1Ratcalmodulin binding enablesISOIQGAP1 (Homo sapiens)1624291 PMID:18567582RGDPMID:18567582
Iqgap1Ratcalmodulin binding enablesIBAPANTHER:PTN000365541 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Iqgap1RatGTPase activator activity enablesIBAPANTHER:PTN000365540 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Iqgap1RatMAP-kinase scaffold activity enablesISOIQGAP1 (Homo sapiens)1624291UniProtKB:P15056 and PMID:18567582RGDPMID:18567582
Iqgap1Ratmitogen-activated protein kinase binding  IPIMapk1 (Rattus norvegicus)11049533 RGD 
Iqgap1Ratmolecular adaptor activity enablesISOIQGAP1 (Homo sapiens)1624291 PMID:26242911RGDPMID:26242911
Iqgap1Ratphosphatidylinositol-3,4,5-trisphosphate binding enablesISOIQGAP1 (Homo sapiens)1624291 PMID:22493426RGDPMID:22493426
Iqgap1Ratprotein binding  IPIAkap5 (Rattus norvegicus)1304429 RGD 
Iqgap1Ratprotein binding enablesISOIqgap1 (Mus musculus)1624291PR:O88653 more ...RGDPMID:16628219 more ...
Iqgap1Ratprotein binding enablesISOIQGAP1 (Homo sapiens)1624291UniProtKB:A8MW99 more ...RGDPMID:10793131 more ...
Iqgap1Ratprotein binding  IPIPcna (Rattus norvegicus)11049555 RGD 
Iqgap1Ratprotein domain specific binding enablesISOIQGAP1 (Homo sapiens)1624291UniProtKB:P15311 and PMID:25554515RGDPMID:25554515
Iqgap1Ratprotein kinase binding enablesISOIQGAP1 (Homo sapiens)1624291UniProtKB:P15056 more ...RGDPMID:17563371 and PMID:18567582
Iqgap1Ratprotein phosphatase binding enablesISOIQGAP1 (Homo sapiens)1624291UniProtKB:P28827 and PMID:16380380RGDPMID:16380380
Iqgap1Ratprotein serine/threonine kinase activator activity enablesISOIQGAP1 (Homo sapiens)1624291 PMID:17563371RGDPMID:17563371
Iqgap1Ratprotein-containing complex binding  IPINphs1 (Rattus norvegicus)1600864 RGD 
Iqgap1RatS100 protein binding enablesISOIQGAP1 (Homo sapiens)1624291UniProtKB:P25815 and PMID:25554515RGDPMID:25554515
Iqgap1Ratsmall GTPase binding enablesISOIQGAP1 (Homo sapiens)1624291UniProtKB:P60953 and PMID:26242911RGDPMID:26242911
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RGD Manual Annotations


  

Imported Annotations - PID (archival)


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Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Regulation of spine density and morphology by IQGAP1 protein domains. Jausoro I, etal., PLoS One. 2013;8(2):e56574. doi: 10.1371/journal.pone.0056574. Epub 2013 Feb 18.
4. IQGAP1 translocates to the nucleus in early S-phase and contributes to cell cycle progression after DNA replication arrest. Johnson M, etal., Int J Biochem Cell Biol. 2011 Jan;43(1):65-73. doi: 10.1016/j.biocel.2010.09.014. Epub 2010 Sep 29.
5. IQGAP1 links PDGF receptor-beta signal to focal adhesions involved in vascular smooth muscle cell migration: role in neointimal formation after vascular injury. Kohno T, etal., Am J Physiol Cell Physiol. 2013 Sep 15;305(6):C591-600. doi: 10.1152/ajpcell.00011.2013. Epub 2013 May 8.
6. Nephrin forms a complex with adherens junction proteins and CASK in podocytes and in Madin-Darby canine kidney cells expressing nephrin. Lehtonen S, etal., Am J Pathol. 2004 Sep;165(3):923-36.
7. IQGAP1 promotes neurite outgrowth in a phosphorylation-dependent manner. Li Z, etal., J Biol Chem. 2005 Apr 8;280(14):13871-8. Epub 2005 Jan 28.
8. IQGAP1 mediates angiotensin II-induced apoptosis of podocytes via the ERK1/2 MAPK signaling pathway. Liu Y, etal., Am J Nephrol. 2013;38(5):430-44. doi: 10.1159/000355970. Epub 2013 Nov 12.
9. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
10. Identification of an IQGAP1/AKAP79 complex in beta-cells. Nauert JB, etal., J Cell Biochem 2003 Sep 1;90(1):97-108.
11. Phosphorylation-dependent interactions of alpha-Actinin-1/IQGAP1 with the AMPA receptor subunit GluR4. Nuriya M, etal., J Neurochem. 2005 Oct;95(2):544-52. doi: 10.1111/j.1471-4159.2005.03410.x.
12. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
13. GOA pipeline RGD automated data pipeline
14. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
15. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
16. Rho GTPases in insulin-stimulated glucose uptake. Satoh T Small GTPases. 2014;5:e28102. doi: 10.4161/sgtp.28102. Epub 2014 Mar 10.
17. CLIP-170 and IQGAP1 cooperatively regulate dendrite morphology. Swiech L, etal., J Neurosci. 2011 Mar 23;31(12):4555-68. doi: 10.1523/JNEUROSCI.6582-10.2011.
18. Hierarchical scaffolding of an ERK1/2 activation pathway. Vetterkind S, etal., Cell Commun Signal. 2013 Aug 29;11:65. doi: 10.1186/1478-811X-11-65.
19. IQGAP1, a novel vascular endothelial growth factor receptor binding protein, is involved in reactive oxygen species--dependent endothelial migration and proliferation. Yamaoka-Tojo M, etal., Circ Res. 2004 Aug 6;95(3):276-83. Epub 2004 Jun 24.
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PMID:12377780   PMID:12477932   PMID:14516655   PMID:15121898   PMID:15166316   PMID:15263019   PMID:15389538   PMID:16369480   PMID:16380380   PMID:16510873   PMID:17137623   PMID:17563371  
PMID:18504258   PMID:18567582   PMID:18604197   PMID:19056867   PMID:19199708   PMID:20015863   PMID:20458337   PMID:21423176   PMID:21525035   PMID:21709260   PMID:22493426   PMID:22835851  
PMID:23376485   PMID:23533145   PMID:24625528   PMID:24841562   PMID:25468996   PMID:25554515   PMID:26242911   PMID:28839270   PMID:29033352   PMID:30257103   PMID:32364766   PMID:34147590  



Iqgap1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81144,088,788 - 144,178,989 (-)NCBIGRCr8
mRatBN7.21134,679,581 - 134,769,776 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1134,679,586 - 134,769,755 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1142,588,968 - 142,679,115 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01149,758,382 - 149,848,532 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01142,676,568 - 142,767,383 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01142,525,041 - 142,615,673 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1142,525,046 - 142,615,673 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01143,476,882 - 143,567,395 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41136,552,358 - 136,642,545 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11136,631,848 - 136,722,691 (-)NCBI
Celera1126,734,261 - 126,824,269 (-)NCBICelera
Cytogenetic Map1q31NCBI
IQGAP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381590,388,242 - 90,502,239 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1590,388,242 - 90,502,239 (+)EnsemblGRCh38hg38GRCh38
GRCh371590,931,474 - 91,045,471 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361588,732,477 - 88,846,479 (+)NCBINCBI36Build 36hg18NCBI36
Build 341588,732,476 - 88,846,479NCBI
Celera1567,336,216 - 67,450,214 (+)NCBICelera
Cytogenetic Map15q26.1NCBI
HuRef1567,043,721 - 67,156,752 (+)NCBIHuRef
CHM1_11590,773,219 - 90,887,196 (+)NCBICHM1_1
T2T-CHM13v2.01588,144,255 - 88,258,256 (+)NCBIT2T-CHM13v2.0
Iqgap1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39780,361,331 - 80,453,288 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl780,361,331 - 80,475,722 (-)EnsemblGRCm39 Ensembl
GRCm38780,711,583 - 80,815,549 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl780,711,583 - 80,825,974 (-)EnsemblGRCm38mm10GRCm38
MGSCv37787,856,469 - 87,948,217 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36780,586,294 - 80,676,807 (-)NCBIMGSCv36mm8
Celera778,116,162 - 78,211,858 (-)NCBICelera
Cytogenetic Map7D3NCBI
cM Map745.68NCBI
Iqgap1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541614,560,292 - 14,650,036 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541614,558,628 - 14,652,031 (+)NCBIChiLan1.0ChiLan1.0
IQGAP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21679,935,362 - 80,049,434 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11583,634,820 - 83,748,904 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01569,076,025 - 69,190,082 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11588,276,762 - 88,390,721 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1588,276,851 - 88,388,594 (+)Ensemblpanpan1.1panPan2
IQGAP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1353,683,869 - 53,791,136 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl353,683,791 - 53,792,186 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha356,321,230 - 56,429,279 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0354,099,750 - 54,207,801 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl354,098,495 - 54,207,760 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1353,618,792 - 53,726,768 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0353,830,202 - 53,938,180 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0354,170,507 - 54,278,357 (-)NCBIUU_Cfam_GSD_1.0
Iqgap1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640129,739,918 - 129,845,387 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648316,489,133 - 16,594,783 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648316,489,127 - 16,594,712 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
IQGAP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1299,363,273 - 9,485,644 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl299,362,926 - 9,485,526 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605937,209,223 - 37,324,055 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Iqgap1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476817,702,728 - 17,799,022 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476817,703,113 - 17,797,922 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Iqgap1
501 total Variants

Predicted Target Of
Summary Value
Count of predictions:506
Count of miRNA genes:224
Interacting mature miRNAs:274
Transcripts:ENSRNOT00000018021
Prediction methods:Microtar, Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 61 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
61442Strs1Sensitivity to stroke QTL 17.4cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)1121767634166767634Rat
1578780Cm52Cardiac mass QTL 523.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)181591954219808434Rat
1578654Bss10Bone structure and strength QTL 104femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)149393172159356837Rat
1598866Bp287Blood pressure QTL 2875.1arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1121006655166006655Rat
1578770Stresp23Stress response QTL 23kidney sympathetic nerve activity (VT:0004050)stimulated renal sympathetic nerve activity to basal renal sympathetic nerve activity ratio (CMO:0001786)1123350408182418476Rat
9590300Scort16Serum corticosterone level QTL 164.390.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)1103111621148111621Rat
2298545Neuinf8Neuroinflammation QTL 84.6nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)157336763151090257Rat
7794788Mcs32Mammary carcinoma susceptibility QTL 322.61mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)1115540693238914717Rat
631199Cm23Cardiac mass QTL 234.60.0004heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)1115585465172949803Rat
2313402Anxrr24Anxiety related response QTL 24aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)148963584144267916Rat

1 to 10 of 61 rows
D1Got124  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.01142,624,945 - 142,625,025NCBIRnor6.0
Rnor_5.01143,576,626 - 143,576,706UniSTSRnor5.0
RGSC_v3.41136,652,602 - 136,652,683RGDRGSC3.4
RGSC_v3.41136,652,603 - 136,652,683UniSTSRGSC3.4
RGSC_v3.11136,731,009 - 136,731,089RGD
Celera1126,833,500 - 126,833,582UniSTS
RH 3.4 Map11077.3RGD
RH 3.4 Map11077.3UniSTS
RH 2.0 Map1689.9RGD
Cytogenetic Map1q31UniSTS
RH129224  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21134,679,647 - 134,679,852 (+)MAPPERmRatBN7.2
Rnor_6.01142,525,108 - 142,525,312NCBIRnor6.0
Rnor_5.01143,476,949 - 143,477,153UniSTSRnor5.0
RGSC_v3.41136,552,425 - 136,552,629UniSTSRGSC3.4
Celera1126,734,328 - 126,734,532UniSTS
RH 3.4 Map11075.5UniSTS
Cytogenetic Map1q31UniSTS
AU047418  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21134,742,669 - 134,742,966 (+)MAPPERmRatBN7.2
Rnor_6.01142,588,533 - 142,588,829NCBIRnor6.0
Rnor_5.01143,540,374 - 143,540,670UniSTSRnor5.0
RGSC_v3.41136,615,441 - 136,615,737UniSTSRGSC3.4
Celera1126,797,222 - 126,797,518UniSTS
Cytogenetic Map1q31UniSTS
RH137092  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21134,678,465 - 134,678,664 (+)MAPPERmRatBN7.2
Rnor_6.01142,523,926 - 142,524,124NCBIRnor6.0
Rnor_5.01143,475,767 - 143,475,965UniSTSRnor5.0
RGSC_v3.41136,551,243 - 136,551,441UniSTSRGSC3.4
Celera1126,733,146 - 126,733,344UniSTS
RH 3.4 Map11075.5UniSTS
Cytogenetic Map1q31UniSTS
AI011928  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21134,678,462 - 134,678,748 (+)MAPPERmRatBN7.2
Rnor_6.01142,523,923 - 142,524,208NCBIRnor6.0
Rnor_5.01143,475,764 - 143,476,049UniSTSRnor5.0
RGSC_v3.41136,551,240 - 136,551,525UniSTSRGSC3.4
Celera1126,733,143 - 126,733,428UniSTS
RH 3.4 Map11075.7UniSTS
Cytogenetic Map1q31UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000018021   ⟹   ENSRNOP00000018021
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1134,679,586 - 134,769,755 (-)Ensembl
Rnor_6.0 Ensembl1142,525,046 - 142,615,673 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000118439   ⟹   ENSRNOP00000093807
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1134,679,586 - 134,767,547 (-)Ensembl
RefSeq Acc Id: NM_001108489   ⟹   NP_001101959
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81144,088,788 - 144,178,953 (-)NCBI
mRatBN7.21134,679,581 - 134,769,755 (-)NCBI
Rnor_6.01142,525,041 - 142,615,673 (-)NCBI
Rnor_5.01143,476,882 - 143,567,395 (-)NCBI
RGSC_v3.41136,552,358 - 136,642,545 (-)RGD
Celera1126,734,261 - 126,824,269 (-)RGD
Sequence:
RefSeq Acc Id: XM_039082350   ⟹   XP_038938278
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81144,105,668 - 144,178,989 (-)NCBI
mRatBN7.21134,696,450 - 134,769,776 (-)NCBI
1 to 9 of 9 rows
Protein RefSeqs NP_001101959 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938278 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAI69057 (Get FASTA)   NCBI Sequence Viewer  
  EDM08654 (Get FASTA)   NCBI Sequence Viewer  
  EDM08655 (Get FASTA)   NCBI Sequence Viewer  
  EDM08656 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000018021.5
  ENSRNOP00000093807
  ENSRNOP00000093807.1
1 to 9 of 9 rows
RefSeq Acc Id: NP_001101959   ⟸   NM_001108489
- UniProtKB: G3V7Q7 (UniProtKB/TrEMBL),   A6JCC7 (UniProtKB/TrEMBL),   A0A8I6AJK7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000018021   ⟸   ENSRNOT00000018021
RefSeq Acc Id: XP_038938278   ⟸   XM_039082350
- Peptide Label: isoform X1
Ensembl Acc Id: ENSRNOP00000093807   ⟸   ENSRNOT00000118439
Calponin-homology (CH)   Ras-GAP

Name Modeler Protein Id AA Range Protein Structure
AF-G3V7Q7-F1-model_v2 AlphaFold G3V7Q7 1-1657 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13690148
Promoter ID:EPDNEW_R673
Type:initiation region
Name:Iqgap1_1
Description:IQ motif containing GTPase activating protein 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01142,615,673 - 142,615,733EPDNEW


1 to 40 of 44 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-58724 BioCyc
Ensembl Genes ENSRNOG00000012002 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000018021.6 UniProtKB/TrEMBL
  ENSRNOT00000118439 ENTREZGENE
  ENSRNOT00000118439.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.418.10 UniProtKB/TrEMBL
  1.20.5.190 UniProtKB/TrEMBL
  GTPase Activation - p120gap, domain 1 UniProtKB/TrEMBL
  Myosin, subunit A UniProtKB/TrEMBL
InterPro Calponin-like_dom_sf UniProtKB/TrEMBL
  CH-domain UniProtKB/TrEMBL
  IQ_motif_EF-hand-BS UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
  RasGAP UniProtKB/TrEMBL
  RasGAP_C UniProtKB/TrEMBL
  RasGAP_CS UniProtKB/TrEMBL
  Rho_GTPase_activation_prot UniProtKB/TrEMBL
  WW_Rsp5_WWP UniProtKB/TrEMBL
KEGG Report rno:361598 UniProtKB/TrEMBL
NCBI Gene 361598 ENTREZGENE
PANTHER RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIF UniProtKB/TrEMBL
  RAS GTPASE-ACTIVATING-LIKE PROTEIN IQGAP1 UniProtKB/TrEMBL
Pfam PF00307 UniProtKB/TrEMBL
  PF00612 UniProtKB/TrEMBL
  RasGAP UniProtKB/TrEMBL
  RasGAP_C UniProtKB/TrEMBL
PhenoGen Iqgap1 PhenoGen
PROSITE PS50021 UniProtKB/TrEMBL
  PS50096 UniProtKB/TrEMBL
  RAS_GTPASE_ACTIV_1 UniProtKB/TrEMBL
  RAS_GTPASE_ACTIV_2 UniProtKB/TrEMBL
  WW_DOMAIN_1 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000012002 RatGTEx
SMART RasGAP UniProtKB/TrEMBL
  SM00015 UniProtKB/TrEMBL
  SM00033 UniProtKB/TrEMBL
Superfamily-SCOP Calponin-homology UniProtKB/TrEMBL
  RGC domain-like UniProtKB/TrEMBL
  Rho_GAP UniProtKB/TrEMBL
  SSF52540 UniProtKB/TrEMBL
1 to 40 of 44 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-30 Iqgap1  IQ motif containing GTPase activating protein 1   Iqgap1_predicted  IQ motif containing GTPase activating protein 1 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Iqgap1_predicted  IQ motif containing GTPase activating protein 1 (predicted)      Symbol and Name status set to approved 70820 APPROVED