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Gene: Cracdl (CRACD like) Rattus norvegicus

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Symbol:

Cracdl

Name:

CRACD like

RGD ID:

1310819

Description:

Orthologous to human CRACDL (CRACD like); INTERACTS WITH (+)-schisandrin B; 2,2',5,5'-tetrachlorobiphenyl; bisphenol A.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC301351; RGD1310819; similar to putative protein (5S487); uncharacterized protein KIAA1211-like homolog

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CRACDL (CRACD like)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther
Mus musculus (house mouse):	Cracdl (capping protein inhibiting regulator of actin like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Cracdl (CRACD like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CRACDL (CRACD like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CRACDL (CRACD like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Cracdl (CRACD like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CRACDL (CRACD like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CRACDL (CRACD like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Cracdl (CRACD like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Cracdl (CRACD like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	TSPAN4 (tetraspanin 4)	HGNC	OMA
Alliance orthologs ³
Mus musculus (house mouse):	Cracdl (capping protein inhibiting regulator of actin like)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	CRACDL (CRACD like)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	si:ch211-121j5.4	Alliance	DIOPT (OrthoFinder\|OrthoInspector\|PANTHER)
Danio rerio (zebrafish):	si:ch211-121j5.4	Alliance	DIOPT (OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Danio rerio (zebrafish):	si:ch211-149l1.2	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Danio rerio (zebrafish):	si:ch211-149l1.2	Alliance	DIOPT (Hieranoid\|OrthoFinder\|OrthoInspector\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	cracdl	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	47,323,785 - 47,446,612 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	9	47,329,902 - 47,445,310 (-)	Ensembl				GRCr8
mRatBN7.2	9	39,834,321 - 39,950,763 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	39,834,833 - 39,951,086 (-)	Ensembl				mRatBN7.2
Rnor_6.0	9	44,194,348 - 44,309,816 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	44,194,325 - 44,237,117 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	9	43,895,614 - 44,009,422 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	9	36,545,857 - 36,585,543 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	9	37,588,547 - 37,704,315 (-)	NCBI		Celera
RGSC_v3.1	9	36,546,870 - 36,582,552 (-)	NCBI
Cytogenetic Map	9	q21	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (EXP)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,2',5,5'-tetrachlorobiphenyl (EXP)

2-palmitoylglycerol (ISO)

4-hydroxyphenyl retinamide (ISO)

aflatoxin B1 (ISO)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (ISO)

beta-naphthoflavone (ISO)

bisphenol A (EXP,ISO)

cadmium dichloride (EXP,ISO)

cisplatin (ISO)

decabromodiphenyl ether (EXP)

fenvalerate (EXP)

folic acid (ISO)

genistein (ISO)

iron dichloride (ISO)

ketamine (EXP)

lead diacetate (ISO)

lipopolysaccharide (ISO)

manganese(II) chloride (EXP)

methoxychlor (EXP)

okadaic acid (ISO)

ozone (ISO)

paracetamol (EXP,ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

sulforaphane (ISO)

tetrachloromethane (EXP)

thiram (ISO)

trichloroethene (EXP)

triphenyl phosphate (ISO)

valproic acid (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Genomics

Comparative Map Data

Cracdl
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	47,323,785 - 47,446,612 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	9	47,329,902 - 47,445,310 (-)	Ensembl				GRCr8
mRatBN7.2	9	39,834,321 - 39,950,763 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	39,834,833 - 39,951,086 (-)	Ensembl				mRatBN7.2
Rnor_6.0	9	44,194,348 - 44,309,816 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	44,194,325 - 44,237,117 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	9	43,895,614 - 44,009,422 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	9	36,545,857 - 36,585,543 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	9	37,588,547 - 37,704,315 (-)	NCBI		Celera
RGSC_v3.1	9	36,546,870 - 36,582,552 (-)	NCBI
Cytogenetic Map	9	q21	NCBI

CRACDL
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	98,793,846 - 98,936,225 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	98,793,845 - 98,936,259 (-)	Ensembl			hg38	GRCh38
GRCh37	2	99,410,309 - 99,552,688 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	98,776,741 - 98,919,116 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	2	93,615,445 - 93,757,699 (-)	NCBI		Celera
Cytogenetic Map	2	q11.2	NCBI
HuRef	2	93,175,937 - 93,318,619 (-)	NCBI		HuRef
CHM1_1	2	99,414,638 - 99,557,436 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	2	99,252,281 - 99,394,756 (-)	NCBI		T2T-CHM13v2.0

Cracdl
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	37,650,758 - 37,758,905 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	37,650,758 - 37,759,166 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	1	37,611,676 - 37,720,089 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	37,611,677 - 37,720,085 (-)	Ensembl			mm10	GRCm38
MGSCv37	1	37,668,521 - 37,776,656 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	1	37,556,221 - 37,667,753 (-)	NCBI		MGSCv36	mm8
Celera	1	37,393,635 - 37,426,520 (-)	NCBI		Celera
Cytogenetic Map	1	B	NCBI
cM Map	1	15.57	NCBI

Cracdl
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955470	5,227,379 - 5,285,021 (-)	Ensembl
ChiLan1.0	NW_004955470	5,227,759 - 5,343,535 (-)	NCBI	ChiLan1.0	ChiLan1.0

CRACDL
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	12	29,501,782 - 29,643,254 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2A	29,504,544 - 29,646,016 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2A	100,369,080 - 100,510,589 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2A	99,721,777 - 99,795,367 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2

CRACDL
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	10	43,684,912 - 43,867,373 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	10	43,691,154 - 43,865,683 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	10	43,655,968 - 43,790,250 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	10	44,563,475 - 44,740,240 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	10	44,551,229 - 44,739,542 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	10	44,271,687 - 44,451,211 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	10	44,601,040 - 44,741,956 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	10	44,741,407 - 44,917,506 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Cracdl
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024406292	84,617,052 - 84,668,358 (-)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936744	1,869,996 - 2,001,383 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CRACDL
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	55,351,099 - 55,489,119 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	3	55,350,490 - 55,489,126 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	57,958,964 - 58,040,761 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CRACDL
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	14	2,520,454 - 2,665,348 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	14	2,519,920 - 2,597,409 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666041	170,050,550 - 170,250,521 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cracdl
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624749	3,855,728 - 3,978,782 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624749	3,855,949 - 3,983,786 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Cracdl
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	4	113,803,537 - 113,862,268 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Cracdl
1155 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	198
Count of miRNA genes:	124
Interacting mature miRNAs:	137
Transcripts:	ENSRNOT00000051376, ENSRNOT00000065692, ENSRNOT00000068496
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2303170	Bp332	Blood pressure QTL 332	3.73	0.027	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	9	6714888	84474983	Rat
631211	Bw4	Body weight QTL4	5.31		retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	9	5346479	50346479	Rat
7411571	Bw138	Body weight QTL 138	14.3	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	9	40029925	85029925	Rat
2303559	Gluco54	Glucose level QTL 54	2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	9	8750492	53750492	Rat
1300180	Bw14	Body weight QTL 14	3.776		body mass (VT:0001259)	body weight (CMO:0000012)	9	31250432	68875676	Rat
8662828	Vetf6	Vascular elastic tissue fragility QTL 6	3.9		artery integrity trait (VT:0010639)	patent ductus arteriosus score (CMO:0002566)	9	44458256	99506504	Rat
61450	Ciaa3	CIA Autoantibody QTL 3	6.5		blood autoantibody amount (VT:0003725)	calculated serum anti-type 2 collagen antibody titer (CMO:0001279)	9	29567664	74567664	Rat
1598834	Memor11	Memory QTL 11	2.5		exploratory behavior trait (VT:0010471)	average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)	9	44458256	85262605	Rat
70186	Niddm26	Non-insulin dependent diabetes mellitus QTL 26	3.87		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	9	29567664	83835942	Rat
70218	Cm28	Cardiac mass QTL 28	8.3	0.0001	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	9	41720295	86720295	Rat
1641911	Alcrsp13	Alcohol response QTL 13			response to alcohol trait (VT:0010489)	brain neurotensin receptor 1 density (CMO:0002068)	9	6214995	51214995	Rat
1354650	Despr5	Despair related QTL 5	4.01	0.0017	locomotor behavior trait (VT:0001392)	amount of time spent in voluntary immobility (CMO:0001043)	9	8750492	53750492	Rat
2290450	Scl57	Serum cholesterol level QTL 57	4.15		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	9	44458256	121768150	Rat
7207805	Bmd88	Bone mineral density QTL 88	4		femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	9	31250432	65651574	Rat
61425	Cia15	Collagen induced arthritis QTL 15	4.6		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	9	5346479	50416711	Rat
1581517	Bp284	Blood pressure QTL 284			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	39220186	84220186	Rat
1600365	Mcs20	Mammary carcinoma susceptibility QTL 20	3		mammary gland integrity trait (VT:0010552)	mammary tumor growth rate (CMO:0000344)	9	21031430	49025574	Rat
7411656	Foco26	Food consumption QTL 26	9.8	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	9	40029925	85029925	Rat
1298088	Edpm11	Estrogen-dependent pituitary mass QTL 11	2.5		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	9	6214995	51214995	Rat
1641894	Alcrsp12	Alcohol response QTL 12			response to alcohol trait (VT:0010489)	brain neurotensin receptor 1 density (CMO:0002068)	9	34960590	79960590	Rat
1598823	Memor16	Memory QTL 16	1.9		exploratory behavior trait (VT:0010471)	difference between duration of physical contact or close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)	9	31456061	57460683	Rat

Markers in Region

BE102839

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	39,901,222 - 39,901,408 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	44,260,265 - 44,260,450	NCBI	Rnor6.0
Rnor_5.0	9	43,960,292 - 43,960,477	UniSTS	Rnor5.0
RGSC_v3.4	9	36,611,777 - 36,611,962	UniSTS	RGSC3.4
Celera	9	37,655,068 - 37,655,253	UniSTS
RH 3.4 Map	9	367.0	UniSTS
Cytogenetic Map	9	q21	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	10	62	162	88	87	56	65	56	6	319	158	11	140	81	91	31	16	16

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001428724	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001428725	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001428726	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006226803	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006226804	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006226805	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006226806	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006244861	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006244862	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006244863	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006244864	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008758015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008758016	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008758017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008767054	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008767055	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039084538	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268117	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473965	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000068496 ⟹ ENSRNOP00000062387

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	47,329,902 - 47,373,154 (-)	Ensembl
mRatBN7.2 Ensembl	9	39,834,833 - 39,877,219 (-)	Ensembl
Rnor_6.0 Ensembl	9	44,194,325 - 44,237,117 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000102615 ⟹ ENSRNOP00000097364

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	47,330,130 - 47,445,310 (-)	Ensembl
mRatBN7.2 Ensembl	9	39,834,833 - 39,951,086 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000118166 ⟹ ENSRNOP00000097029

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	47,329,993 - 47,390,162 (-)	Ensembl
mRatBN7.2 Ensembl	9	39,834,833 - 39,894,575 (-)	Ensembl

RefSeq Acc Id:

XM_006244861 ⟹ XP_006244923

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	47,323,785 - 47,390,454 (-)	NCBI
mRatBN7.2	9	39,834,321 - 39,894,634 (-)	NCBI
Rnor_6.0	9	44,194,348 - 44,253,708 (-)	NCBI
Rnor_5.0	9	43,895,614 - 44,009,422 (-)	NCBI

Sequence:

show sequence

CTCCCGGAGGAATTCTGGTGTTCTGGGGAGTATTATTCCAATAGTCTGATAGCCAAAGGGAGGG
GCTGCATGTCTGTTTAGGTCCTGTTCTTCCTGTAAGAGGACACAGTCCTGCCCCTCAGCCTCTG
CCACCTCCCCGGTGAGGACGGTGAGCTGGAGTTTGTTGTGTTTTGTTCTCTGTGGTGTAGCAGC
GATTCCAGTCACCGTGAGGCAGGTGACAACCACTCCAGACCAACTCCCCAAGGAGTCAGGCCAC
CCCCACTCCTTGCCCACAGGAGAAGGAAGTGCGTGTGCCTCTCAGAGAGCAGTAACTGCCCGGT
GCCTGCACACCTGCCCAAGAAGCCCCGGGGCTCCGTGGTTGGCAGAAACCCCACTTCCTCATGG
CTCAGAAGAGTTGCTGGGGGAACAGGGGCAAGAACTCGTGCCCAGTGCCCAGTGGTGTCCCAAG
AGCCCCTTGCCCCTCAAGAGTGGACAGGGTGGCCCACTCTTCTTCCTGCTGCTAGTCCCCAGAA
GGATGAGAGAAGCTGAGGCTTGCTGTACGCTCAGGAAGATGTCTGCCTTCTACCAGTGCGTCAG
GCCTGATCCCAGTGACCTGGACATGATTTCCACAAGGGTGATGGACATTAAACTTCGGGAGGCT
GCTGAAGGCCTTGGGGAAGACAGCACAGGAAAGAAAAAGTCCAAATTTAAAACATTTAAGAAGC
TGTTTGGGAAGAAGAAGAGAAAGGAAACAGCACCCACAGGAAACAGCGCCTGGAAGCAAAATCC
GGCCAAGAGCGAGGTTATCACTATCGAGGAGTCGGGCCCTGTGTATGACTCTGAAGATGAACTG
GAGGAGTCCAGGGGCACCATGGGCAGCCGGGCCCTCTCCCACGACAGTATTTTCTTTCCTGAAT
CGGGACAGGACCCTGCTCGGCCTGTGCGGGTGTTCTCCCAAGAAAATGTGTGTGACCGGATCAA
GGCTTTGCAGTTAAAGATACAATGTAATGTGAAGTTGGGGCCACCGCCTCCAGGAGGCCTTCCT
ATCAAGCGGGCAGAGGAAACCGGCATGAGTTCTGAGGATGACGGACTGCCCCGGAGTCCACCAG
AGATGTCTCTGCTGCACGACGTGGGTCCAGGCCCAGCTATAAAGATCCTGGTGTCCTCATCCCG
GCCGCAGTCTCCCGACCACATGAGCGATGCCTCCGTCTCGTCTCGGACCTTGGATGGCAGCCTG
GCACCTGTGGTTGACTTCAGCCACCCTCCTGAATTCTCCTCCTGCCTGGACAACTCTGCAGCTA
AACACAAGCTGCTGGTGAAGCCCCGCAACCAGCGATCAAGTAAATTAAGGCGGCTGTCTTCGAG
GGCACAGTCTGAATGCCTGAGTGATCTGTCATGGACCTTAGAGGAGGAAGACTATGAAGAGAAG
TCATTGTTCCATGTCAGCATGGAAGAGAGCCCAGATGTTAGACAGCGGGATTTGATGCCAGGCA
GAAGGTCCGAGTTTGGAGGACCTGCAACCTTGCTGTCACCTGGAGGGGCCTGTGCCAGGCGTGC
TCGCCTACAGCACAGCACGGCAGTCAGTGCCAGCATGGAGGAGGGAGGCTCTCTTGGAAATGAA
CCCTCAAGCCTCCCGGCCACGCCAGAGGTCAGCGAGCCCATGGCGGTCTCAGTCCCAGGCTTAG
AGTCCCTATCTCTGCTAGAAAGTTCTCCATACCATATTCCTCGTGTTGAAATCAAGAAGGAAGA
GCTGTCCACTGGAGGCCTGTGTCCCCTAGTGGAGAGTACATCAAAGGAGGCTCCTTGTGGTTCT
GGAGATGTGGAAACCCCACTATCTACTGATATCCCTGAGAGGGATGTGGTACCTTCCAAGGAGG
GCTCTGCCCCTCCAGAGGGAGACCAAGCATTTCCTGAAGGAGACACAACACTCCCTGGAGGGGA
TACTCTACCTCCTGAGGGAAACACAACACCTCCCAAGGGTGTCATGGCACCTCCTGAGAGAGAC
ATATCACCTTCCAAGGACAATATGTCACCTCCCAAGAGGATCATGGCACCCCCAGAGAGAGACA
AGTCACCTTCTGAGGGAGATGTGGCACCTCCCAAGAGGATCATGGCACCCCCAGAGAGAGACAA
GTCACCTTCTGAGGGAGATGTGGCACCTCCCAAGAGGATCATGGCACCCCCAGAGAGAGACAAA
TCACCTTCTGAGGGAGATGTGGCACCTCCCAAGAGGATCATGGCACCCCCAGAGAGAGACAAGT
CACCTTCTGAGGGAGATGTGACACCTCCCAAGAGGATCATGGCACCCCCAGAGAGAGACAAGTC
ACCTTCTGAGGGAGATGTGGCACCACCTAAAGGGATCATGGCACCCCCAGAGATAGACAAGTCA
CCTTCTGAGGGAGATGTGGCACCACCTAAAGGGATCATGGAGCCTCCTGAGAGGGACATGTTAC
TTCCAAAGGGAGACATACCACCTGCTAAGACTATCACTGATACCAACTTGGAGACGCCTTCAGA
TACAGAGAGACAAGACCAAAGTGTCCAGGAGGAGGAGTTGACCCTGGTGGTACCCAGGCCTGAG
AGAGCAACAGGGACAGAATCTTCCACAATTCCTGCCCCAAGCCCTCCGGCACCCAAGAGCTGCC
TGAAGCACAAAACCTTGGTTCCCAGTGGGTCCGCCGCAGAGTCTCCTCTGAAAGAGCCCAGCCT
ATCAGTCCAGGACAAAGCAGCTGTGCCTCCGGCCCGCCACAGGCCAACACAGGCTGCAACCTCA
GGAGGTCCAGAGAGGGCAGCCCCGGGAAGAAAGAGCGACCGCAGTGCGGAGCCACAGCGCAGCA
GCGTTAAGAGGTTCTCTGTGACCTCGAGCAGGGCACGTGCCCGTGCCAGCAGCTCCCGCCTTCC
CGAATATTCTGCGCATGTGCCTGCAGGGGGACGGGCACCCTTGCTGCGGAGTGGCCTTGCCTGG
AGGAGTGAGGCAGCACTTGATGACCTCCAGGTGCCGCCAAAACCACCGGACCGGAAGACAACGG
GTGGTGACCCTCAAAACTCAGGGGATGTGGGGGCCGGCCAGGCAGGACCGGGCAAGAGCCTCCA
GGATGCTGAGTCTTGTGCTGCTACCTTGCAGGAGCCAGCCGCTGGGGAGGACCAGAGCCTCTTC
CCAGTCAAGCTGCGCTCCACCTCACTCTCACTCAAATACAGAGACAGCTCTGCCCATGAGGCCA
AAGCCATCAAGAGGTACAGCGCCGAAGTCAGGTTGGAGAAAGGTGGCCTGGCTCTGCTCCCCAA
GGATGAACAGAGCCATGTCGGGGCTGCCCCTGCACTGCGAGGCTCTAGGTCCCCCAATGGGCAA
GGGAAAGGAAAGACCAGGTCTCCTGAGCAGCCCGGTACCAAGCCACCCCTGCCCAGGAAGCCGC
TTCTGCAAAGCCTTACTTTGCCGTACCCAGCCGCAGGCCCGGATACCAGCCCTGGGGAGTCCGA
GAGACTCATACCGGTCAACCAGCCTCCCGAGCCCAGGAAGGAGAAGTCGCCCCATCAGGGAGCT
GAAAAGGGTCAGCCTCCTGCGGCTACAGGTCCTGGGGCTGATGGGCAACCCACCCCACCCTGGA
TAACCATGGCCCGGCAGAAACGGAGAGGAGCCCCAGACCTGCCAGTCAACCAAGAAGAGAAACC
TGGGTCACGGCTCCAGAAGACAGAAACTGGAAAGCAAGCCAAGGTGGCCGAGAGAGTCCAGGAG
TCTGTGAAGCAGGGTGACTTCGTCCGAAGCAAATCTTTCCTGATGACCCCTGCAAAGCCCCCTG
TGACCCAGAGGCAGGGGTCAAAGCTGAGCCTCAAGGAGGGACTGCAGAGAGGAATCTCGCTGTC
CCATCAGAACTTGGCTCAGGCTGCAGCCACCACAGAGAAGGAACTTCATCAGCTGAAGAGAGCC
AGCTATGCTAGTTCCGATCAGCCATCCTGGATGGAACTCGCCAGAAAGAAATCTCAAGCCTGGA
GCGACATGCCCCAAATCATAAAATAGATTGGCAGCCTGCTGATGAAGGATGTCCACTGTATCGA
CGAGCCACTTAGTTTTAAACTGCCAATAAATCATGGCAGGCAGACTGTGAAACTTAGGATTGAT
TTTTGTCAACGGGTTGCGAGCAGCTCGGAGAAGAGAGAGGAACCAGGGGGAACAAAGAAGACCA
GCAGACAGCCTCAGTGCCGGAGCCAGAGGGGCTGTGGCAAGAATGTTGCAAAGTCCAGGGGCGC
CATCCATGGCAAGAATGTTGCAAAGTCCAGGGGCGCCATTCCTGAGCTGAGTTGTCAGCCTGAG
CCTACGAGTCCCCGGTCTACGCTGCCTCTTGCCATCAGCCAGTGCCTCTGGCCACCGTCTTGCC
GTGGACCACCGTTTTGTGTTTACTAATAAGCATGATGTTTATGGTAAAGCAGGGATGCCCTTTT
ACAAGAGCAGTTACCTAACAATCCAGTTTCCTGAAGAAACCCACCCCGAGAAGGAGAGGAAGGG
ACGTGGCAGGGTTTGTCAATTCATAGACTGTTTCCAAAAATAATTTTTAAACTTTTCCACTAGG
CACCTGTGTCCCGAACCATTGCAAAATGCATTGCCTGTTTAATAAAAAGTTTCAAACACG

hide sequence

RefSeq Acc Id:

XM_006244862 ⟹ XP_006244924

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	47,323,785 - 47,390,454 (-)	NCBI
mRatBN7.2	9	39,834,321 - 39,894,635 (-)	NCBI
Rnor_6.0	9	44,194,348 - 44,253,708 (-)	NCBI
Rnor_5.0	9	43,895,614 - 44,009,422 (-)	NCBI

Sequence:

show sequence

CTCCCGGAGGAATTCTGGTGTTCTGGGGAGTATTATTCCAATAGTCTGATAGCCAAAGGGAGGG
GCTGCATGTCTGTTTAGGTCCTGTTCTTCCTGTAAGAGGACACAGTCCTGCCCCTCAGCCTCTG
CCACCTCCCCGGTGAGGACGGTGAGCTGGAGTTTGTTGTGTTTTGTTCTCTGTGGTGTAGCAGC
GATTCCAGTCACCGTGAGGCAGGTGACAACCACTCCAGACCAACTCCCCAAGGAGTCAGGCCAC
CCCCACTCCTTGCCCACAGGAGAAGGAAGTGCGTGTGCCTCTCAGAGAGCAGTAACTGCCCGGT
GCCTGCACACCTGCCCAAGAAGCCCCGGGGCTCCGTGGTTGGCAGAAACCCCACTTCCTCATGG
CTCAGAAGAGTTGCTGGGGGAACAGGGGCAAGAACTCGTGCCCAGTGCCCAGTGGTGTCCCAAG
AGCCCCTTGCCCCTCAAGAGTGGACAGGGTGGCCCACTCTTCTTCCTGCTGCTAGTCCCCAGAA
GGATGAGAGAAGCTGAGGCTTGCTGTACGCTCAGGAAGATGTCTGCCTTCTACCAGTGCGTCAG
GCCTGATCCCAGTGACCTGGACATGATTTCCACAAGGGTGATGGACATTAAACTTCGGGAGGCT
GCTGAAGGCCTTGGGGAAGACAGCACAGGAAAGAAAAAGTCCAAATTTAAAACATTTAAGAAGC
TGTTTGGGAAGAAGAAGAGAAAGGAAACAGCACCCACAGGAAACAGCGCCTGGAAGCAAAATCC
GGCCAAGAGCGAGGTTATCACTATCGAGGAGTCGGGCCCTGTGTATGACTCTGAAGATGAACTG
GAGGAGTCCAGGGGCACCATGGGCAGCCGGGCCCTCTCCCACGACAGTATTTTCTTTCCTGAAT
CGGGACAGGACCCTGCTCGGCCTGTGCGGGTGTTCTCCCAAGAAAATGTGTGTGACCGGATCAA
GGCTTTGCAGTTAAAGATACAATGTAATGTGAAGTTGGGGCCACCGCCTCCAGGAGGCCTTCCT
ATCAAGCGGGCAGAGGAAACCGGCATGAGTTCTGAGGATGACGGACTGCCCCGGAGTCCACCAG
AGATGTCTCTGCTGCACGACGTGGGTCCAGGCCCAGCTATAAAGATCCTGGTGTCCTCATCCCG
GCCGCAGTCTCCCGACCACATGAGCGATGCCTCCGTCTCGTCTCGGACCTTGGATGGCAGCCTG
GCACCTGTGGTTGACTTCAGCCACCCTCCTGAATTCTCCTCCTGCCTGGACAACTCTGCAGCTA
AACACAAGCTGCTGGTGAAGCCCCGCAACCAGCGATCAAGTAAATTAAGGCGGCTGTCTTCGAG
GGCACAGTCTGAATGCCTGAGTGATCTGTCATGGACCTTAGAGGAGGAAGACTATGAAGAGAAG
TCATTGTTCCATGTCAGCATGGAAGAGAGCCCAGATGTTAGACAGCGGGATTTGATGCCAGGCA
GAAGGTCCGAGTTTGGAGGACCTGCAACCTTGCTGTCACCTGGAGGGGCCTGTGCCAGGCGTGC
TCGCCTACAGCACAGCACGGCAGTCAGTGCCAGCATGGAGGAGGGAGGCTCTCTTGGAAATGAA
CCCTCAAGCCTCCCGGCCACGCCAGAGGTCAGCGAGCCCATGGCGGTCTCAGTCCCAGGCTTAG
AGTCCCTATCTCTGCTAGAAAGTTCTCCATACCATATTCCTCGTGTTGAAATCAAGAAGGAAGA
GCTGTCCACTGGAGGCCTGTGTCCCCTAGTGGAGAGTACATCAAAGGAGGCTCCTTGTGGTTCT
GGAGATGTGGAAACCCCACTATCTACTGATATCCCTGAGAGGGATGTGGTACCTTCCAAGGAGG
GCTCTGCCCCTCCAGAGGGAGACCAAGCATTTCCTGAAGGAGACACAACACTCCCTGGAGGGGA
TACTCTACCTCCTGAGGGAAACACAACACCTCCCAAGGGTGTCATGGCACCTCCTGAGAGAGAC
ATATCACCTTCCAAGGACAATATGTCACCTCCCAAGAGGATCATGGCACCCCCAGAGAGAGACA
AGTCACCTTCTGAGGGAGATGTGGCACCTCCCAAGAGGATCATGGCACCCCCAGAGAGAGACAA
GTCACCTTCTGAGGGAGATGTGGCACCTCCCAAGAGGATCATGGCACCCCCAGAGAGAGACAAA
TCACCTTCTGAGGGAGATGTGGCACCTCCCAAGAGGATCATGGCACCCCCAGAGAGAGACAAGT
CACCTTCTGAGGGAGATGTGACACCTCCCAAGAGGATCATGGCACCCCCAGAGAGAGACAAGTC
ACCTTCTGAGGGAGATGTGGCACCACCTAAAGGGATCATGGCACCCCCAGAGATAGACAAGTCA
CCTTCTGAGGGAGATGTGGCACCACCTAAAGGGATCATGGAGCCTCCTGAGAGGGACATGTTAC
TTCCAAAGGGAGACATACCACCTGCTAAGACTATCACTGATACCAACTTGGAGACGCCTTCAGA
TACAGAGAGACAAGACCAAAGTGTCCAGGAGGAGGAGTTGACCCTGGTGGTACCCAGGCCTGAG
AGAGCAACAGGGACAGAATCTTCCACAATTCCTGCCCCAAGCCCTCCGGCACCCAAGAGCTGCC
TGAAGCACAAAACCTTGGTTCCCAGTGGGTCCGCCGCAGAGTCTCCTCTGAAAGAGCCCAGCCT
ATCAGTCCAGGACAAAGCAGCTGTGCCTCCGGCCCGCCACAGGCCAACACAGGCTGCAACCTCA
GGAGGTCCAGAGAGGGCAGCCCCGGGAAGAAAGAGCGACCGCAGTGCGGAGCCACAGCGCAGCA
GCGTTAAGAGGTTCTCTGTGACCTCGAGCAGGGCACGTGCCCGTGCCAGCAGCTCCCGCCTTCC
CGAATATTCTGCGCATGTGCCTGCAGGGGGACGGGCACCCTTGCTGCGGAGTGGCCTTGCCTGG
AGGAGTGAGGCAGCACTTGATGACCTCCAGGTGCCGCCAAAACCACCGGACCGGAAGACAACGG
GTGGTGACCCTCAAAACTCAGGGGATGTGGGGGCCGGCCAGGCAGGACCGGGCAAGAGCCTCCA
GGATGCTGAGTCTTGTGCTGCTACCTTGCAGGAGCCAGCCGCTGGGGAGGACCAGAGCCTCTTC
CCAGTCAAGCTGCGCTCCACCTCACTCTCACTCAAATACAGAGACAGCTCTGCCCATGAGGCCA
AAGCCATCAAGAGGTACAGCGCCGAAGTCAGGTTGGAGAAAGGTGGCCTGGCTCTGCTCCCCAA
GGATGAACAGAGCCATGTCGGGGCTGCCCCTGCACTGCGAGGCTCTAGGTCCCCCAATGGGCAA
GGGAAAGGAAAGACCAGGTCTCCTGAGCAGCCCGGTACCAAGCCACCCCTGCCCAGGAAGCCGC
TTCTGCAAAGCCTTACTTTGCCGTACCCAGCCGCAGGCCCGGATACCAGCCCTGGGGAGTCCGA
GAGACTCATACCGGTCAACCAGCCTCCCGAGCCCAGGAAGGAGAAGTCGCCCCATCAGGGAGCT
GAAAAGGGTCAGCCTCCTGCGGCTACAGGTCCTGGGGCTGATGGGCAACCCACCCCACCCTGGA
TAACCATGGCCCGGCAGAAACGGAGAGGAGCCCCAGACCTGCCAGTCAACCAAGAAGAGAAACC
TGGGTCACGGCTCCAGAAGACAGAAACTGGAAAGCAAGCCAAGGTGGCCGAGAGAGTCCAGGAG
TCTGTGAAGCAGGGTGACTTCGTCCGAAGCAAATCTTTCCTGATGACCCCTGCAAAGCCCCCTG
TGACCCAGAGGCAGGGGTCAAAGCTGAGCCTCAAGGAGGGACTGCAGAGAGGAATCTCGCTGTC
CCATCAGAACTTGGCAGCTCAGGCTGCAGCCACCACAGAGAAGGAACTTCATCAGCTGAAGAGA
GCCAGCTATGCTAGTTCCGATCAGCCATCCTGGATGGAACTCGCCAGAAAGAAATCTCAAGCCT
GGAGCGACATGCCCCAAATCATAAAATAGATTGGCAGCCTGCTGATGAAGGATGTCCACTGTAT
CGACGAGCCACTTAGTTTTAAACTGCCAATAAATCATGGCAGGCAGACTGTGAAACTTAGGATT
GATTTTTGTCAACGGGTTGCGAGCAGCTCGGAGAAGAGAGAGGAACCAGGGGGAACAAAGAAGA
CCAGCAGACAGCCTCAGTGCCGGAGCCAGAGGGGCTGTGGCAAGAATGTTGCAAAGTCCAGGGG
CGCCATCCATGGCAAGAATGTTGCAAAGTCCAGGGGCGCCATTCCTGAGCTGAGTTGTCAGCCT
GAGCCTACGAGTCCCCGGTCTACGCTGCCTCTTGCCATCAGCCAGTGCCTCTGGCCACCGTCTT
GCCGTGGACCACCGTTTTGTGTTTACTAATAAGCATGATGTTTATGGTAAAGCAGGGATGCCCT
TTTACAAGAGCAGTTACCTAACAATCCAGTTTCCTGAAGAAACCCACCCCGAGAAGGAGAGGAA
GGGACGTGGCAGGGTTTGTCAATTCATAGACTGTTTCCAAAAATAATTTTTAAACTTTTCCACT
AGGCACCTGTGTCCCGAACCATTGCAAAATGCATTGCCTGTTTAATAAAAAGTTTCAAACACG

hide sequence

RefSeq Acc Id:

XM_006244864 ⟹ XP_006244926

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	47,323,785 - 47,373,558 (-)	NCBI
mRatBN7.2	9	39,834,321 - 39,877,444 (-)	NCBI
Rnor_6.0	9	44,194,348 - 44,237,111 (-)	NCBI
Rnor_5.0	9	43,895,614 - 44,009,422 (-)	NCBI

Sequence:

show sequence

GTGAGACAGTTGGTGCCATGCTGCTCTCCGTGGGTCATGTGCAGTCACTGTGATTAATGCCAAG
TCCAAGGGATGGAAAACCCCTGCACTTCCACCTCTTTACTCCAGCGACAGCCGGGCAGTGACCT
GGACATGATTTCCACAAGGGTGATGGACATTAAACTTCGGGAGGCTGCTGAAGGCCTTGGGGAA
GACAGCACAGGAAAGAAAAAGTCCAAATTTAAAACATTTAAGAAGCTGTTTGGGAAGAAGAAGA
GAAAGGAAACAGCACCCACAGGAAACAGCGCCTGGAAGCAAAATCCGGCCAAGAGCGAGGTTAT
CACTATCGAGGAGTCGGGCCCTGTGTATGACTCTGAAGATGAACTGGAGGAGTCCAGGGGCACC
ATGGGCAGCCGGGCCCTCTCCCACGACAGTATTTTCTTTCCTGAATCGGGACAGGACCCTGCTC
GGCCTGTGCGGGTGTTCTCCCAAGAAAATGTGTGTGACCGGATCAAGGCTTTGCAGTTAAAGAT
ACAATGTAATGTGAAGTTGGGGCCACCGCCTCCAGGAGGCCTTCCTATCAAGCGGGCAGAGGAA
ACCGGCATGAGTTCTGAGGATGACGGACTGCCCCGGAGTCCACCAGAGATGTCTCTGCTGCACG
ACGTGGGTCCAGGCCCAGCTATAAAGATCCTGGTGTCCTCATCCCGGCCGCAGTCTCCCGACCA
CATGAGCGATGCCTCCGTCTCGTCTCGGACCTTGGATGGCAGCCTGGCACCTGTGGTTGACTTC
AGCCACCCTCCTGAATTCTCCTCCTGCCTGGACAACTCTGCAGCTAAACACAAGCTGCTGGTGA
AGCCCCGCAACCAGCGATCAAGTAAATTAAGGCGGCTGTCTTCGAGGGCACAGTCTGAATGCCT
GAGTGATCTGTCATGGACCTTAGAGGAGGAAGACTATGAAGAGAAGTCATTGTTCCATGTCAGC
ATGGAAGAGAGCCCAGATGTTAGACAGCGGGATTTGATGCCAGGCAGAAGGTCCGAGTTTGGAG
GACCTGCAACCTTGCTGTCACCTGGAGGGGCCTGTGCCAGGCGTGCTCGCCTACAGCACAGCAC
GGCAGTCAGTGCCAGCATGGAGGAGGGAGGCTCTCTTGGAAATGAACCCTCAAGCCTCCCGGCC
ACGCCAGAGGTCAGCGAGCCCATGGCGGTCTCAGTCCCAGGCTTAGAGTCCCTATCTCTGCTAG
AAAGTTCTCCATACCATATTCCTCGTGTTGAAATCAAGAAGGAAGAGCTGTCCACTGGAGGCCT
GTGTCCCCTAGTGGAGAGTACATCAAAGGAGGCTCCTTGTGGTTCTGGAGATGTGGAAACCCCA
CTATCTACTGATATCCCTGAGAGGGATGTGGTACCTTCCAAGGAGGGCTCTGCCCCTCCAGAGG
GAGACCAAGCATTTCCTGAAGGAGACACAACACTCCCTGGAGGGGATACTCTACCTCCTGAGGG
AAACACAACACCTCCCAAGGGTGTCATGGCACCTCCTGAGAGAGACATATCACCTTCCAAGGAC
AATATGTCACCTCCCAAGAGGATCATGGCACCCCCAGAGAGAGACAAGTCACCTTCTGAGGGAG
ATGTGGCACCTCCCAAGAGGATCATGGCACCCCCAGAGAGAGACAAGTCACCTTCTGAGGGAGA
TGTGGCACCTCCCAAGAGGATCATGGCACCCCCAGAGAGAGACAAATCACCTTCTGAGGGAGAT
GTGGCACCTCCCAAGAGGATCATGGCACCCCCAGAGAGAGACAAGTCACCTTCTGAGGGAGATG
TGACACCTCCCAAGAGGATCATGGCACCCCCAGAGAGAGACAAGTCACCTTCTGAGGGAGATGT
GGCACCACCTAAAGGGATCATGGCACCCCCAGAGATAGACAAGTCACCTTCTGAGGGAGATGTG
GCACCACCTAAAGGGATCATGGAGCCTCCTGAGAGGGACATGTTACTTCCAAAGGGAGACATAC
CACCTGCTAAGACTATCACTGATACCAACTTGGAGACGCCTTCAGATACAGAGAGACAAGACCA
AAGTGTCCAGGAGGAGGAGTTGACCCTGGTGGTACCCAGGCCTGAGAGAGCAACAGGGACAGAA
TCTTCCACAATTCCTGCCCCAAGCCCTCCGGCACCCAAGAGCTGCCTGAAGCACAAAACCTTGG
TTCCCAGTGGGTCCGCCGCAGAGTCTCCTCTGAAAGAGCCCAGCCTATCAGTCCAGGACAAAGC
AGCTGTGCCTCCGGCCCGCCACAGGCCAACACAGGCTGCAACCTCAGGAGGTCCAGAGAGGGCA
GCCCCGGGAAGAAAGAGCGACCGCAGTGCGGAGCCACAGCGCAGCAGCGTTAAGAGGTTCTCTG
TGACCTCGAGCAGGGCACGTGCCCGTGCCAGCAGCTCCCGCCTTCCCGAATATTCTGCGCATGT
GCCTGCAGGGGGACGGGCACCCTTGCTGCGGAGTGGCCTTGCCTGGAGGAGTGAGGCAGCACTT
GATGACCTCCAGGTGCCGCCAAAACCACCGGACCGGAAGACAACGGGTGGTGACCCTCAAAACT
CAGGGGATGTGGGGGCCGGCCAGGCAGGACCGGGCAAGAGCCTCCAGGATGCTGAGTCTTGTGC
TGCTACCTTGCAGGAGCCAGCCGCTGGGGAGGACCAGAGCCTCTTCCCAGTCAAGCTGCGCTCC
ACCTCACTCTCACTCAAATACAGAGACAGCTCTGCCCATGAGGCCAAAGCCATCAAGAGGTACA
GCGCCGAAGTCAGGTTGGAGAAAGGTGGCCTGGCTCTGCTCCCCAAGGATGAACAGAGCCATGT
CGGGGCTGCCCCTGCACTGCGAGGCTCTAGGTCCCCCAATGGGCAAGGGAAAGGAAAGACCAGG
TCTCCTGAGCAGCCCGGTACCAAGCCACCCCTGCCCAGGAAGCCGCTTCTGCAAAGCCTTACTT
TGCCGTACCCAGCCGCAGGCCCGGATACCAGCCCTGGGGAGTCCGAGAGACTCATACCGGTCAA
CCAGCCTCCCGAGCCCAGGAAGGAGAAGTCGCCCCATCAGGGAGCTGAAAAGGGTCAGCCTCCT
GCGGCTACAGGTCCTGGGGCTGATGGGCAACCCACCCCACCCTGGATAACCATGGCCCGGCAGA
AACGGAGAGGAGCCCCAGACCTGCCAGTCAACCAAGAAGAGAAACCTGGGTCACGGCTCCAGAA
GACAGAAACTGGAAAGCAAGCCAAGGTGGCCGAGAGAGTCCAGGAGTCTGTGAAGCAGGGTGAC
TTCGTCCGAAGCAAATCTTTCCTGATGACCCCTGCAAAGCCCCCTGTGACCCAGAGGCAGGGGT
CAAAGCTGAGCCTCAAGGAGGGACTGCAGAGAGGAATCTCGCTGTCCCATCAGAACTTGGCAGC
TCAGGCTGCAGCCACCACAGAGAAGGAACTTCATCAGCTGAAGAGAGCCAGCTATGCTAGTTCC
GATCAGCCATCCTGGATGGAACTCGCCAGAAAGAAATCTCAAGCCTGGAGCGACATGCCCCAAA
TCATAAAATAGATTGGCAGCCTGCTGATGAAGGATGTCCACTGTATCGACGAGCCACTTAGTTT
TAAACTGCCAATAAATCATGGCAGGCAGACTGTGAAACTTAGGATTGATTTTTGTCAACGGGTT
GCGAGCAGCTCGGAGAAGAGAGAGGAACCAGGGGGAACAAAGAAGACCAGCAGACAGCCTCAGT
GCCGGAGCCAGAGGGGCTGTGGCAAGAATGTTGCAAAGTCCAGGGGCGCCATCCATGGCAAGAA
TGTTGCAAAGTCCAGGGGCGCCATTCCTGAGCTGAGTTGTCAGCCTGAGCCTACGAGTCCCCGG
TCTACGCTGCCTCTTGCCATCAGCCAGTGCCTCTGGCCACCGTCTTGCCGTGGACCACCGTTTT
GTGTTTACTAATAAGCATGATGTTTATGGTAAAGCAGGGATGCCCTTTTACAAGAGCAGTTACC
TAACAATCCAGTTTCCTGAAGAAACCCACCCCGAGAAGGAGAGGAAGGGACGTGGCAGGGTTTG
TCAATTCATAGACTGTTTCCAAAAATAATTTTTAAACTTTTCCACTAGGCACCTGTGTCCCGAA
CCATTGCAAAATGCATTGCCTGTTTAATAAAAAGTTTCAAACACG

hide sequence

RefSeq Acc Id:

XM_008767055 ⟹ XP_008765277

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	47,323,785 - 47,446,612 (-)	NCBI
mRatBN7.2	9	39,834,321 - 39,950,763 (-)	NCBI
Rnor_6.0	9	44,194,348 - 44,309,816 (-)	NCBI

Sequence:

show sequence

GAGCGCGCGCCCAGCGCAGGGCCAGCGCGGCCGCCCGAGGGTCGCGTCCGCGTCCATCCCCCGG
CCGCAGACCCTGCGGTCCTCGCGCCCTACCGCCACCTGCTGCGCGACGCCGCTGGCTCTCGACT
CTGCAGCTGGGGGTCAGCGCGCACCCCGGCAGAGCAGCCCCACGCGTGTCCCCGCGGACTGAGC
CCTTCTCGTCACGCTCGCCACGCACGGCCACGCTCCGGTGCCAGTGACCTGGACATGATTTCCA
CAAGGGTGATGGACATTAAACTTCGGGAGGCTGCTGAAGGCCTTGGGGAAGACAGCACAGGAAA
GAAAAAGTCCAAATTTAAAACATTTAAGAAGCTGTTTGGGAAGAAGAAGAGAAAGGAAACAGCA
CCCACAGGAAACAGCGCCTGGAAGCAAAATCCGGCCAAGAGCGAGGTTATCACTATCGAGGAGT
CGGGCCCTGTGTATGACTCTGAAGATGAACTGGAGGAGTCCAGGGGCACCATGGGCAGCCGGGC
CCTCTCCCACGACAGTATTTTCTTTCCTGAATCGGGACAGGACCCTGCTCGGCCTGTGCGGGTG
TTCTCCCAAGAAAATGTGTGTGACCGGATCAAGGCTTTGCAGTTAAAGATACAATGTAATGTGA
AGTTGGGGCCACCGCCTCCAGGAGGCCTTCCTATCAAGCGGGCAGAGGAAACCGGCATGAGTTC
TGAGGATGACGGACTGCCCCGGAGTCCACCAGAGATGTCTCTGCTGCACGACGTGGGTCCAGGC
CCAGCTATAAAGATCCTGGTGTCCTCATCCCGGCCGCAGTCTCCCGACCACATGAGCGATGCCT
CCGTCTCGTCTCGGACCTTGGATGGCAGCCTGGCACCTGTGGTTGACTTCAGCCACCCTCCTGA
ATTCTCCTCCTGCCTGGACAACTCTGCAGCTAAACACAAGCTGCTGGTGAAGCCCCGCAACCAG
CGATCAAGTAAATTAAGGCGGCTGTCTTCGAGGGCACAGTCTGAATGCCTGAGTGATCTGTCAT
GGACCTTAGAGGAGGAAGACTATGAAGAGAAGTCATTGTTCCATGTCAGCATGGAAGAGAGCCC
AGATGTTAGACAGCGGGATTTGATGCCAGGCAGAAGGTCCGAGTTTGGAGGACCTGCAACCTTG
CTGTCACCTGGAGGGGCCTGTGCCAGGCGTGCTCGCCTACAGCACAGCACGGCAGTCAGTGCCA
GCATGGAGGAGGGAGGCTCTCTTGGAAATGAACCCTCAAGCCTCCCGGCCACGCCAGAGGTCAG
CGAGCCCATGGCGGTCTCAGTCCCAGGCTTAGAGTCCCTATCTCTGCTAGAAAGTTCTCCATAC
CATATTCCTCGTGTTGAAATCAAGAAGGAAGAGCTGTCCACTGGAGGCCTGTGTCCCCTAGTGG
AGAGTACATCAAAGGAGGCTCCTTGTGGTTCTGGAGATGTGGAAACCCCACTATCTACTGATAT
CCCTGAGAGGGATGTGGTACCTTCCAAGGAGGGCTCTGCCCCTCCAGAGGGAGACCAAGCATTT
CCTGAAGGAGACACAACACTCCCTGGAGGGGATACTCTACCTCCTGAGGGAAACACAACACCTC
CCAAGGGTGTCATGGCACCTCCTGAGAGAGACATATCACCTTCCAAGGACAATATGTCACCTCC
CAAGAGGATCATGGCACCCCCAGAGAGAGACAAGTCACCTTCTGAGGGAGATGTGGCACCTCCC
AAGAGGATCATGGCACCCCCAGAGAGAGACAAGTCACCTTCTGAGGGAGATGTGGCACCTCCCA
AGAGGATCATGGCACCCCCAGAGAGAGACAAATCACCTTCTGAGGGAGATGTGGCACCTCCCAA
GAGGATCATGGCACCCCCAGAGAGAGACAAGTCACCTTCTGAGGGAGATGTGACACCTCCCAAG
AGGATCATGGCACCCCCAGAGAGAGACAAGTCACCTTCTGAGGGAGATGTGGCACCACCTAAAG
GGATCATGGCACCCCCAGAGATAGACAAGTCACCTTCTGAGGGAGATGTGGCACCACCTAAAGG
GATCATGGAGCCTCCTGAGAGGGACATGTTACTTCCAAAGGGAGACATACCACCTGCTAAGACT
ATCACTGATACCAACTTGGAGACGCCTTCAGATACAGAGAGACAAGACCAAAGTGTCCAGGAGG
AGGAGTTGACCCTGGTGGTACCCAGGCCTGAGAGAGCAACAGGGACAGAATCTTCCACAATTCC
TGCCCCAAGCCCTCCGGCACCCAAGAGCTGCCTGAAGCACAAAACCTTGGTTCCCAGTGGGTCC
GCCGCAGAGTCTCCTCTGAAAGAGCCCAGCCTATCAGTCCAGGACAAAGCAGCTGTGCCTCCGG
CCCGCCACAGGCCAACACAGGCTGCAACCTCAGGAGGTCCAGAGAGGGCAGCCCCGGGAAGAAA
GAGCGACCGCAGTGCGGAGCCACAGCGCAGCAGCGTTAAGAGGTTCTCTGTGACCTCGAGCAGG
GCACGTGCCCGTGCCAGCAGCTCCCGCCTTCCCGAATATTCTGCGCATGTGCCTGCAGGGGGAC
GGGCACCCTTGCTGCGGAGTGGCCTTGCCTGGAGGAGTGAGGCAGCACTTGATGACCTCCAGGT
GCCGCCAAAACCACCGGACCGGAAGACAACGGGTGGTGACCCTCAAAACTCAGGGGATGTGGGG
GCCGGCCAGGCAGGACCGGGCAAGAGCCTCCAGGATGCTGAGTCTTGTGCTGCTACCTTGCAGG
AGCCAGCCGCTGGGGAGGACCAGAGCCTCTTCCCAGTCAAGCTGCGCTCCACCTCACTCTCACT
CAAATACAGAGACAGCTCTGCCCATGAGGCCAAAGCCATCAAGAGGTACAGCGCCGAAGTCAGG
TTGGAGAAAGGTGGCCTGGCTCTGCTCCCCAAGGATGAACAGAGCCATGTCGGGGCTGCCCCTG
CACTGCGAGGCTCTAGGTCCCCCAATGGGCAAGGGAAAGGAAAGACCAGGTCTCCTGAGCAGCC
CGGTACCAAGCCACCCCTGCCCAGGAAGCCGCTTCTGCAAAGCCTTACTTTGCCGTACCCAGCC
GCAGGCCCGGATACCAGCCCTGGGGAGTCCGAGAGACTCATACCGGTCAACCAGCCTCCCGAGC
CCAGGAAGGAGAAGTCGCCCCATCAGGGAGCTGAAAAGGGTCAGCCTCCTGCGGCTACAGGTCC
TGGGGCTGATGGGCAACCCACCCCACCCTGGATAACCATGGCCCGGCAGAAACGGAGAGGAGCC
CCAGACCTGCCAGTCAACCAAGAAGAGAAACCTGGGTCACGGCTCCAGAAGACAGAAACTGGAA
AGCAAGCCAAGGTGGCCGAGAGAGTCCAGGAGTCTGTGAAGCAGGGTGACTTCGTCCGAAGCAA
ATCTTTCCTGATGACCCCTGCAAAGCCCCCTGTGACCCAGAGGCAGGGGTCAAAGCTGAGCCTC
AAGGAGGGACTGCAGAGAGGAATCTCGCTGTCCCATCAGAACTTGGCAGCTCAGGCTGCAGCCA
CCACAGAGAAGGAACTTCATCAGCTGAAGAGAGCCAGCTATGCTAGTTCCGATCAGCCATCCTG
GATGGAACTCGCCAGAAAGAAATCTCAAGCCTGGAGCGACATGCCCCAAATCATAAAATAGATT
GGCAGCCTGCTGATGAAGGATGTCCACTGTATCGACGAGCCACTTAGTTTTAAACTGCCAATAA
ATCATGGCAGGCAGACTGTGAAACTTAGGATTGATTTTTGTCAACGGGTTGCGAGCAGCTCGGA
GAAGAGAGAGGAACCAGGGGGAACAAAGAAGACCAGCAGACAGCCTCAGTGCCGGAGCCAGAGG
GGCTGTGGCAAGAATGTTGCAAAGTCCAGGGGCGCCATCCATGGCAAGAATGTTGCAAAGTCCA
GGGGCGCCATTCCTGAGCTGAGTTGTCAGCCTGAGCCTACGAGTCCCCGGTCTACGCTGCCTCT
TGCCATCAGCCAGTGCCTCTGGCCACCGTCTTGCCGTGGACCACCGTTTTGTGTTTACTAATAA
GCATGATGTTTATGGTAAAGCAGGGATGCCCTTTTACAAGAGCAGTTACCTAACAATCCAGTTT
CCTGAAGAAACCCACCCCGAGAAGGAGAGGAAGGGACGTGGCAGGGTTTGTCAATTCATAGACT
GTTTCCAAAAATAATTTTTAAACTTTTCCACTAGGCACCTGTGTCCCGAACCATTGCAAAATGC
ATTGCCTGTTTAATAAAAAGTTTCAAACACG

hide sequence

RefSeq Acc Id:

XM_039084538 ⟹ XP_038940466

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	47,323,785 - 47,445,820 (-)	NCBI
mRatBN7.2	9	39,834,321 - 39,950,109 (-)	NCBI

RefSeq Acc Id:

XM_063268117 ⟹ XP_063124187

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	47,323,785 - 47,446,612 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001415653	(Get FASTA)	NCBI Sequence Viewer
	NP_001415654	(Get FASTA)	NCBI Sequence Viewer
	NP_001415655	(Get FASTA)	NCBI Sequence Viewer
	XP_006244923	(Get FASTA)	NCBI Sequence Viewer
	XP_006244924	(Get FASTA)	NCBI Sequence Viewer
	XP_006244926	(Get FASTA)	NCBI Sequence Viewer
	XP_008765277	(Get FASTA)	NCBI Sequence Viewer
	XP_038940466	(Get FASTA)	NCBI Sequence Viewer
	XP_063124187	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL99234	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000062387
	ENSRNOP00000062387.4
	ENSRNOP00000097029
	ENSRNOP00000097029.1
	ENSRNOP00000097364
	ENSRNOP00000097364.2

RefSeq Acc Id:

XP_006244924 ⟸ XM_006244862

- Peptide Label:

isoform X1

- Sequence:

show sequence

MREAEACCTLRKMSAFYQCVRPDPSDLDMISTRVMDIKLREAAEGLGEDSTGKKKSKFKTFKKL
FGKKKRKETAPTGNSAWKQNPAKSEVITIEESGPVYDSEDELEESRGTMGSRALSHDSIFFPES
GQDPARPVRVFSQENVCDRIKALQLKIQCNVKLGPPPPGGLPIKRAEETGMSSEDDGLPRSPPE
MSLLHDVGPGPAIKILVSSSRPQSPDHMSDASVSSRTLDGSLAPVVDFSHPPEFSSCLDNSAAK
HKLLVKPRNQRSSKLRRLSSRAQSECLSDLSWTLEEEDYEEKSLFHVSMEESPDVRQRDLMPGR
RSEFGGPATLLSPGGACARRARLQHSTAVSASMEEGGSLGNEPSSLPATPEVSEPMAVSVPGLE
SLSLLESSPYHIPRVEIKKEELSTGGLCPLVESTSKEAPCGSGDVETPLSTDIPERDVVPSKEG
SAPPEGDQAFPEGDTTLPGGDTLPPEGNTTPPKGVMAPPERDISPSKDNMSPPKRIMAPPERDK
SPSEGDVAPPKRIMAPPERDKSPSEGDVAPPKRIMAPPERDKSPSEGDVAPPKRIMAPPERDKS
PSEGDVTPPKRIMAPPERDKSPSEGDVAPPKGIMAPPEIDKSPSEGDVAPPKGIMEPPERDMLL
PKGDIPPAKTITDTNLETPSDTERQDQSVQEEELTLVVPRPERATGTESSTIPAPSPPAPKSCL
KHKTLVPSGSAAESPLKEPSLSVQDKAAVPPARHRPTQAATSGGPERAAPGRKSDRSAEPQRSS
VKRFSVTSSRARARASSSRLPEYSAHVPAGGRAPLLRSGLAWRSEAALDDLQVPPKPPDRKTTG
GDPQNSGDVGAGQAGPGKSLQDAESCAATLQEPAAGEDQSLFPVKLRSTSLSLKYRDSSAHEAK
AIKRYSAEVRLEKGGLALLPKDEQSHVGAAPALRGSRSPNGQGKGKTRSPEQPGTKPPLPRKPL
LQSLTLPYPAAGPDTSPGESERLIPVNQPPEPRKEKSPHQGAEKGQPPAATGPGADGQPTPPWI
TMARQKRRGAPDLPVNQEEKPGSRLQKTETGKQAKVAERVQESVKQGDFVRSKSFLMTPAKPPV
TQRQGSKLSLKEGLQRGISLSHQNLAAQAAATTEKELHQLKRASYASSDQPSWMELARKKSQAW
SDMPQIIK

hide sequence

RefSeq Acc Id:

XP_006244926 ⟸ XM_006244864

- Peptide Label:

isoform X4

- Sequence:

show sequence

MENPCTSTSLLQRQPGSDLDMISTRVMDIKLREAAEGLGEDSTGKKKSKFKTFKKLFGKKKRKE
TAPTGNSAWKQNPAKSEVITIEESGPVYDSEDELEESRGTMGSRALSHDSIFFPESGQDPARPV
RVFSQENVCDRIKALQLKIQCNVKLGPPPPGGLPIKRAEETGMSSEDDGLPRSPPEMSLLHDVG
PGPAIKILVSSSRPQSPDHMSDASVSSRTLDGSLAPVVDFSHPPEFSSCLDNSAAKHKLLVKPR
NQRSSKLRRLSSRAQSECLSDLSWTLEEEDYEEKSLFHVSMEESPDVRQRDLMPGRRSEFGGPA
TLLSPGGACARRARLQHSTAVSASMEEGGSLGNEPSSLPATPEVSEPMAVSVPGLESLSLLESS
PYHIPRVEIKKEELSTGGLCPLVESTSKEAPCGSGDVETPLSTDIPERDVVPSKEGSAPPEGDQ
AFPEGDTTLPGGDTLPPEGNTTPPKGVMAPPERDISPSKDNMSPPKRIMAPPERDKSPSEGDVA
PPKRIMAPPERDKSPSEGDVAPPKRIMAPPERDKSPSEGDVAPPKRIMAPPERDKSPSEGDVTP
PKRIMAPPERDKSPSEGDVAPPKGIMAPPEIDKSPSEGDVAPPKGIMEPPERDMLLPKGDIPPA
KTITDTNLETPSDTERQDQSVQEEELTLVVPRPERATGTESSTIPAPSPPAPKSCLKHKTLVPS
GSAAESPLKEPSLSVQDKAAVPPARHRPTQAATSGGPERAAPGRKSDRSAEPQRSSVKRFSVTS
SRARARASSSRLPEYSAHVPAGGRAPLLRSGLAWRSEAALDDLQVPPKPPDRKTTGGDPQNSGD
VGAGQAGPGKSLQDAESCAATLQEPAAGEDQSLFPVKLRSTSLSLKYRDSSAHEAKAIKRYSAE
VRLEKGGLALLPKDEQSHVGAAPALRGSRSPNGQGKGKTRSPEQPGTKPPLPRKPLLQSLTLPY
PAAGPDTSPGESERLIPVNQPPEPRKEKSPHQGAEKGQPPAATGPGADGQPTPPWITMARQKRR
GAPDLPVNQEEKPGSRLQKTETGKQAKVAERVQESVKQGDFVRSKSFLMTPAKPPVTQRQGSKL
SLKEGLQRGISLSHQNLAAQAAATTEKELHQLKRASYASSDQPSWMELARKKSQAWSDMPQIIK

hide sequence

RefSeq Acc Id:

XP_006244923 ⟸ XM_006244861

- Peptide Label:

isoform X2

- Sequence:

show sequence

MREAEACCTLRKMSAFYQCVRPDPSDLDMISTRVMDIKLREAAEGLGEDSTGKKKSKFKTFKKL
FGKKKRKETAPTGNSAWKQNPAKSEVITIEESGPVYDSEDELEESRGTMGSRALSHDSIFFPES
GQDPARPVRVFSQENVCDRIKALQLKIQCNVKLGPPPPGGLPIKRAEETGMSSEDDGLPRSPPE
MSLLHDVGPGPAIKILVSSSRPQSPDHMSDASVSSRTLDGSLAPVVDFSHPPEFSSCLDNSAAK
HKLLVKPRNQRSSKLRRLSSRAQSECLSDLSWTLEEEDYEEKSLFHVSMEESPDVRQRDLMPGR
RSEFGGPATLLSPGGACARRARLQHSTAVSASMEEGGSLGNEPSSLPATPEVSEPMAVSVPGLE
SLSLLESSPYHIPRVEIKKEELSTGGLCPLVESTSKEAPCGSGDVETPLSTDIPERDVVPSKEG
SAPPEGDQAFPEGDTTLPGGDTLPPEGNTTPPKGVMAPPERDISPSKDNMSPPKRIMAPPERDK
SPSEGDVAPPKRIMAPPERDKSPSEGDVAPPKRIMAPPERDKSPSEGDVAPPKRIMAPPERDKS
PSEGDVTPPKRIMAPPERDKSPSEGDVAPPKGIMAPPEIDKSPSEGDVAPPKGIMEPPERDMLL
PKGDIPPAKTITDTNLETPSDTERQDQSVQEEELTLVVPRPERATGTESSTIPAPSPPAPKSCL
KHKTLVPSGSAAESPLKEPSLSVQDKAAVPPARHRPTQAATSGGPERAAPGRKSDRSAEPQRSS
VKRFSVTSSRARARASSSRLPEYSAHVPAGGRAPLLRSGLAWRSEAALDDLQVPPKPPDRKTTG
GDPQNSGDVGAGQAGPGKSLQDAESCAATLQEPAAGEDQSLFPVKLRSTSLSLKYRDSSAHEAK
AIKRYSAEVRLEKGGLALLPKDEQSHVGAAPALRGSRSPNGQGKGKTRSPEQPGTKPPLPRKPL
LQSLTLPYPAAGPDTSPGESERLIPVNQPPEPRKEKSPHQGAEKGQPPAATGPGADGQPTPPWI
TMARQKRRGAPDLPVNQEEKPGSRLQKTETGKQAKVAERVQESVKQGDFVRSKSFLMTPAKPPV
TQRQGSKLSLKEGLQRGISLSHQNLAQAAATTEKELHQLKRASYASSDQPSWMELARKKSQAWS
DMPQIIK

hide sequence

RefSeq Acc Id:

XP_008765277 ⟸ XM_008767055

- Peptide Label:

isoform X5

- Sequence:

show sequence

MISTRVMDIKLREAAEGLGEDSTGKKKSKFKTFKKLFGKKKRKETAPTGNSAWKQNPAKSEVIT
IEESGPVYDSEDELEESRGTMGSRALSHDSIFFPESGQDPARPVRVFSQENVCDRIKALQLKIQ
CNVKLGPPPPGGLPIKRAEETGMSSEDDGLPRSPPEMSLLHDVGPGPAIKILVSSSRPQSPDHM
SDASVSSRTLDGSLAPVVDFSHPPEFSSCLDNSAAKHKLLVKPRNQRSSKLRRLSSRAQSECLS
DLSWTLEEEDYEEKSLFHVSMEESPDVRQRDLMPGRRSEFGGPATLLSPGGACARRARLQHSTA
VSASMEEGGSLGNEPSSLPATPEVSEPMAVSVPGLESLSLLESSPYHIPRVEIKKEELSTGGLC
PLVESTSKEAPCGSGDVETPLSTDIPERDVVPSKEGSAPPEGDQAFPEGDTTLPGGDTLPPEGN
TTPPKGVMAPPERDISPSKDNMSPPKRIMAPPERDKSPSEGDVAPPKRIMAPPERDKSPSEGDV
APPKRIMAPPERDKSPSEGDVAPPKRIMAPPERDKSPSEGDVTPPKRIMAPPERDKSPSEGDVA
PPKGIMAPPEIDKSPSEGDVAPPKGIMEPPERDMLLPKGDIPPAKTITDTNLETPSDTERQDQS
VQEEELTLVVPRPERATGTESSTIPAPSPPAPKSCLKHKTLVPSGSAAESPLKEPSLSVQDKAA
VPPARHRPTQAATSGGPERAAPGRKSDRSAEPQRSSVKRFSVTSSRARARASSSRLPEYSAHVP
AGGRAPLLRSGLAWRSEAALDDLQVPPKPPDRKTTGGDPQNSGDVGAGQAGPGKSLQDAESCAA
TLQEPAAGEDQSLFPVKLRSTSLSLKYRDSSAHEAKAIKRYSAEVRLEKGGLALLPKDEQSHVG
AAPALRGSRSPNGQGKGKTRSPEQPGTKPPLPRKPLLQSLTLPYPAAGPDTSPGESERLIPVNQ
PPEPRKEKSPHQGAEKGQPPAATGPGADGQPTPPWITMARQKRRGAPDLPVNQEEKPGSRLQKT
ETGKQAKVAERVQESVKQGDFVRSKSFLMTPAKPPVTQRQGSKLSLKEGLQRGISLSHQNLAAQ
AAATTEKELHQLKRASYASSDQPSWMELARKKSQAWSDMPQIIK

hide sequence

Ensembl Acc Id:

ENSRNOP00000062387 ⟸ ENSRNOT00000068496

RefSeq Acc Id:	XP_038940466 ⟸ XM_039084538
- Peptide Label:	isoform X3

Ensembl Acc Id:

ENSRNOP00000097029 ⟸ ENSRNOT00000118166

Ensembl Acc Id:

ENSRNOP00000097364 ⟸ ENSRNOT00000102615

RefSeq Acc Id:	XP_063124187 ⟸ XM_063268117
- Peptide Label:	isoform X6

Protein Domains

DUF4592

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZBU7-F1-model_v2	AlphaFold	D3ZBU7	1-1151	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1310819	AgrOrtholog
BioCyc Gene	G2FUF-27781	BioCyc
Ensembl Genes	ENSRNOG00000018366	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000068496	ENTREZGENE
	ENSRNOT00000068496.6	UniProtKB/TrEMBL
	ENSRNOT00000102615	ENTREZGENE
	ENSRNOT00000102615.2	UniProtKB/TrEMBL
	ENSRNOT00000118166	ENTREZGENE
	ENSRNOT00000118166.2	UniProtKB/TrEMBL
InterPro	DUF4592	UniProtKB/TrEMBL
	KIAA1211L	UniProtKB/TrEMBL
NCBI Gene	301351	ENTREZGENE
PANTHER	CRACD-LIKE PROTEIN	UniProtKB/TrEMBL
	PTHR47743	UniProtKB/TrEMBL
Pfam	DUF4592	UniProtKB/TrEMBL
PhenoGen	Cracdl	PhenoGen
RatGTEx	ENSRNOG00000018366	RatGTEx
UniProt	A0A8I6AQQ3_RAT	UniProtKB/TrEMBL
	A0A8I6ARE4	ENTREZGENE, UniProtKB/TrEMBL
	D3ZBU7	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2020-02-13	Cracdl	CRACD like	RGD1310819	similar to putative protein (5S487)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	RGD1310819	similar to putative protein (5S487)	RGD1310819_predicted	similar to putative protein (5S487) (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-20	RGD1310819_predicted	similar to putative protein (5S487) (predicted)	LOC301351_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC301351_predicted	similar to putative protein (5S487) (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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