CRACDL (CRACD like) - Rat Genome Database

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Gene: CRACDL (CRACD like) Homo sapiens
Analyze
Symbol: CRACDL
Name: CRACD like
RGD ID: 1602270
HGNC Page HGNC:33454
Description: INTERACTS WITH 17beta-estradiol; 2-palmitoylglycerol; aflatoxin B1
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: C2orf55; hypothetical protein LOC343990; KIAA1211 like; KIAA1211-like; KIAA1211L; MGC42367; uncharacterized protein C2orf55; uncharacterized protein KIAA1211-like
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38298,793,846 - 98,936,225 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl298,793,846 - 98,936,259 (-)EnsemblGRCh38hg38GRCh38
GRCh37299,410,309 - 99,552,688 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36298,776,741 - 98,919,116 (-)NCBINCBI36Build 36hg18NCBI36
Celera293,615,445 - 93,757,699 (-)NCBICelera
Cytogenetic Map2q11.2NCBI
HuRef293,175,937 - 93,318,619 (-)NCBIHuRef
CHM1_1299,414,638 - 99,557,436 (-)NCBICHM1_1
T2T-CHM13v2.0299,252,281 - 99,394,756 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:19416921   PMID:20379614   PMID:29509190   PMID:30021884   PMID:30639242   PMID:31527615   PMID:31586073   PMID:32005204   PMID:35271311  


Genomics

Comparative Map Data
CRACDL
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38298,793,846 - 98,936,225 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl298,793,846 - 98,936,259 (-)EnsemblGRCh38hg38GRCh38
GRCh37299,410,309 - 99,552,688 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36298,776,741 - 98,919,116 (-)NCBINCBI36Build 36hg18NCBI36
Celera293,615,445 - 93,757,699 (-)NCBICelera
Cytogenetic Map2q11.2NCBI
HuRef293,175,937 - 93,318,619 (-)NCBIHuRef
CHM1_1299,414,638 - 99,557,436 (-)NCBICHM1_1
T2T-CHM13v2.0299,252,281 - 99,394,756 (-)NCBIT2T-CHM13v2.0
Cracdl
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39137,650,758 - 37,758,905 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl137,650,758 - 37,759,166 (-)EnsemblGRCm39 Ensembl
GRCm38137,611,676 - 37,720,089 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl137,611,677 - 37,720,085 (-)EnsemblGRCm38mm10GRCm38
MGSCv37137,668,521 - 37,776,656 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36137,556,221 - 37,667,753 (-)NCBIMGSCv36mm8
Celera137,393,635 - 37,426,520 (-)NCBICelera
Cytogenetic Map1BNCBI
cM Map115.57NCBI
Cracdl
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8947,323,785 - 47,446,612 (-)NCBIGRCr8
mRatBN7.2939,834,321 - 39,950,763 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl939,834,833 - 39,951,086 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0944,194,348 - 44,309,816 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl944,194,325 - 44,237,117 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0943,895,614 - 44,009,422 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4936,545,857 - 36,585,543 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1936,546,870 - 36,582,552 (-)NCBI
Celera937,588,547 - 37,704,315 (-)NCBICelera
Cytogenetic Map9q21NCBI
Cracdl
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554705,227,379 - 5,285,021 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554705,227,759 - 5,343,535 (-)NCBIChiLan1.0ChiLan1.0
CRACDL
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21229,501,782 - 29,643,254 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A29,504,544 - 29,646,016 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A100,369,080 - 100,510,589 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A99,721,777 - 99,795,367 (-)NCBIpanpan1.1PanPan1.1panPan2
CRACDL
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11043,684,912 - 43,867,373 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1043,691,154 - 43,865,683 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1043,655,968 - 43,790,250 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01044,563,475 - 44,740,240 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1044,551,229 - 44,739,542 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11044,271,687 - 44,451,211 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01044,601,040 - 44,741,956 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01044,741,407 - 44,917,506 (+)NCBIUU_Cfam_GSD_1.0
Cracdl
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629284,617,052 - 84,668,358 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049367441,869,996 - 2,001,383 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CRACDL
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl355,351,099 - 55,489,119 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1355,350,490 - 55,489,126 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2357,958,964 - 58,040,761 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CRACDL
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1142,520,454 - 2,665,348 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl142,519,920 - 2,597,409 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041170,050,550 - 170,250,521 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cracdl
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247493,855,728 - 3,978,782 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247493,855,949 - 3,983,786 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in CRACDL
33 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 2q11.1-12.1(chr2:94817406-103252396)x3 copy number gain See cases [RCV000052946] Chr2:94817406..103252396 [GRCh38]
Chr2:95618109..103868854 [GRCh37]
Chr2:94846878..103235286 [NCBI36]
Chr2:2q11.1-12.1		 pathogenic
GRCh38/hg38 2q11.2-13(chr2:97672522-110211318)x3 copy number gain See cases [RCV000052947] Chr2:97672522..110211318 [GRCh38]
Chr2:98288985..110968895 [GRCh37]
Chr2:97655417..110326184 [NCBI36]
Chr2:2q11.2-13		 pathogenic
GRCh38/hg38 2p11.2-q11.2(chr2:91443218-102334856)x3 copy number gain See cases [RCV000052945] Chr2:91443218..102334856 [GRCh38]
Chr2:91617683..102951316 [GRCh37]
Chr2:90981410..102317748 [NCBI36]
Chr2:2p11.2-q11.2		 pathogenic
GRCh38/hg38 2q11.2(chr2:98787057-100785053)x1 copy number loss See cases [RCV000054057] Chr2:98787057..100785053 [GRCh38]
Chr2:99403520..101401515 [GRCh37]
Chr2:98769952..100767947 [NCBI36]
Chr2:2q11.2		 pathogenic
NM_207362.2(KIAA1211L):c.22G>A (p.Asp8Asn) single nucleotide variant Malignant melanoma [RCV000065733] Chr2:98846779 [GRCh38]
Chr2:99463242 [GRCh37]
Chr2:98829674 [NCBI36]
Chr2:2q11.2		 not provided
GRCh38/hg38 2q11.1-11.2(chr2:95337458-99072953)x3 copy number gain See cases [RCV000138012] Chr2:95337458..99072953 [GRCh38]
Chr2:96003206..99689416 [GRCh37]
Chr2:95366933..99055848 [NCBI36]
Chr2:2q11.1-11.2		 uncertain significance
GRCh38/hg38 2q11.2(chr2:98411773-101636907)x1 copy number loss See cases [RCV000139206] Chr2:98411773..101636907 [GRCh38]
Chr2:99028236..102253369 [GRCh37]
Chr2:98394668..101619801 [NCBI36]
Chr2:2q11.2		 likely pathogenic
GRCh38/hg38 2q11.1-13(chr2:94678532-110602409)x3 copy number gain See cases [RCV000141075] Chr2:94678532..110602409 [GRCh38]
Chr2:95344257..111359986 [GRCh37]
Chr2:94707984..111076455 [NCBI36]
Chr2:2q11.1-13		 pathogenic
GRCh37/hg19 2p25.3-q37.3(chr2:14238-243048760)x3 copy number gain not provided [RCV000752802] Chr2:14238..243048760 [GRCh37]
Chr2:2p25.3-q37.3		 pathogenic
GRCh37/hg19 2q11.1-12.3(chr2:95529039-108518266) copy number gain See cases [RCV000449270] Chr2:95529039..108518266 [GRCh37]
Chr2:2q11.1-12.3		 pathogenic
GRCh37/hg19 2q11.1-13(chr2:95327499-111370025)x4 copy number gain See cases [RCV000446842] Chr2:95327499..111370025 [GRCh37]
Chr2:2q11.1-13		 pathogenic
GRCh37/hg19 2q11.1-11.2(chr2:95691600-100587394) copy number gain See cases [RCV000447723] Chr2:95691600..100587394 [GRCh37]
Chr2:2q11.1-11.2		 pathogenic
GRCh37/hg19 2p25.3-q37.3(chr2:12771-242783384) copy number gain See cases [RCV000512056] Chr2:12771..242783384 [GRCh37]
Chr2:2p25.3-q37.3		 pathogenic
GRCh37/hg19 2q11.1-12.2(chr2:95518497-107186127) copy number gain See cases [RCV000511158] Chr2:95518497..107186127 [GRCh37]
Chr2:2q11.1-12.2		 uncertain significance
GRCh37/hg19 2p25.3-q37.3(chr2:12771-242783384)x3 copy number gain See cases [RCV000511212] Chr2:12771..242783384 [GRCh37]
Chr2:2p25.3-q37.3		 pathogenic
NM_207362.3(CRACDL):c.2041C>T (p.Pro681Ser) single nucleotide variant not specified [RCV004303077] Chr2:98822232 [GRCh38]
Chr2:99438695 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.2242G>T (p.Gly748Trp) single nucleotide variant not specified [RCV004318261] Chr2:98822031 [GRCh38]
Chr2:99438494 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.1225G>C (p.Gly409Arg) single nucleotide variant not specified [RCV004318928] Chr2:98823048 [GRCh38]
Chr2:99439511 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.1981C>T (p.Pro661Ser) single nucleotide variant not specified [RCV004327645] Chr2:98822292 [GRCh38]
Chr2:99438755 [GRCh37]
Chr2:2q11.2		 uncertain significance
GRCh37/hg19 2q11.1-13(chr2:96353030-114045463)x3 copy number gain not provided [RCV000682168] Chr2:96353030..114045463 [GRCh37]
Chr2:2q11.1-13		 pathogenic
Single allele deletion not provided [RCV000714264] Chr2:40608411..146900718 [GRCh37]
Chr2:2p22.1-q22.3		 likely pathogenic
GRCh37/hg19 2p25.3-q37.3(chr2:15672-243101834)x3 copy number gain not provided [RCV000752804] Chr2:15672..243101834 [GRCh37]
Chr2:2p25.3-q37.3		 pathogenic
NM_207362.3(CRACDL):c.2592C>T (p.Pro864=) single nucleotide variant not provided [RCV000967962] Chr2:98797362 [GRCh38]
Chr2:99413825 [GRCh37]
Chr2:2q11.2		 benign
NM_207362.3(CRACDL):c.2678G>A (p.Arg893Gln) single nucleotide variant not provided [RCV000970077] Chr2:98796191 [GRCh38]
Chr2:99412654 [GRCh37]
Chr2:2q11.2		 benign
GRCh37/hg19 2q11.2(chr2:99542665-100190293)x1 copy number loss not provided [RCV000849567] Chr2:99542665..100190293 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.1357C>T (p.Pro453Ser) single nucleotide variant not specified [RCV004305650] Chr2:98822916 [GRCh38]
Chr2:99439379 [GRCh37]
Chr2:2q11.2		 uncertain significance
GRCh37/hg19 2q11.1-11.2(chr2:95341388-100340514)x3 copy number gain not provided [RCV002473932] Chr2:95341388..100340514 [GRCh37]
Chr2:2q11.1-11.2		 likely pathogenic
GRCh37/hg19 2q11.2(chr2:99356669-99984607)x3 copy number gain not provided [RCV001259644] Chr2:99356669..99984607 [GRCh37]
Chr2:2q11.2		 uncertain significance
GRCh37/hg19 2p25.3-q37.3(chr2:1-243199373) copy number gain Mosaic trisomy 2 [RCV002280628] Chr2:1..243199373 [GRCh37]
Chr2:2p25.3-q37.3		 pathogenic
NM_207362.3(CRACDL):c.970G>A (p.Glu324Lys) single nucleotide variant not specified [RCV004298646] Chr2:98823303 [GRCh38]
Chr2:99439766 [GRCh37]
Chr2:2q11.2		 uncertain significance
GRCh37/hg19 2p25.1-q13(chr2:11504318-111365996)x1 copy number loss See cases [RCV002287563] Chr2:11504318..111365996 [GRCh37]
Chr2:2p25.1-q13		 pathogenic
NM_207362.3(CRACDL):c.2405G>A (p.Arg802His) single nucleotide variant not specified [RCV004311182] Chr2:98821868 [GRCh38]
Chr2:99438331 [GRCh37]
Chr2:2q11.2		 likely benign
NM_207362.3(CRACDL):c.1721T>A (p.Phe574Tyr) single nucleotide variant not specified [RCV004259909] Chr2:98822552 [GRCh38]
Chr2:99439015 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.1343A>G (p.Asp448Gly) single nucleotide variant not specified [RCV004251565] Chr2:98822930 [GRCh38]
Chr2:99439393 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.1724C>G (p.Ser575Trp) single nucleotide variant not specified [RCV004263294] Chr2:98822549 [GRCh38]
Chr2:99439012 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.1381G>A (p.Glu461Lys) single nucleotide variant not specified [RCV004249226] Chr2:98822892 [GRCh38]
Chr2:99439355 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.1423G>C (p.Glu475Gln) single nucleotide variant not specified [RCV004277352] Chr2:98822850 [GRCh38]
Chr2:99439313 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.2200C>G (p.Pro734Ala) single nucleotide variant not specified [RCV004272217] Chr2:98822073 [GRCh38]
Chr2:99438536 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.2677C>T (p.Arg893Trp) single nucleotide variant not specified [RCV004273062] Chr2:98796192 [GRCh38]
Chr2:99412655 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.2295G>C (p.Lys765Asn) single nucleotide variant not specified [RCV004275004] Chr2:98821978 [GRCh38]
Chr2:99438441 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.1457C>G (p.Ala486Gly) single nucleotide variant not specified [RCV004268935] Chr2:98822816 [GRCh38]
Chr2:99439279 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.2492G>T (p.Arg831Leu) single nucleotide variant not specified [RCV004265185] Chr2:98797462 [GRCh38]
Chr2:99413925 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.2032G>A (p.Asp678Asn) single nucleotide variant not specified [RCV004322743] Chr2:98822241 [GRCh38]
Chr2:99438704 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.1040C>T (p.Ala347Val) single nucleotide variant not specified [RCV004342968] Chr2:98823233 [GRCh38]
Chr2:99439696 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.1669C>A (p.Pro557Thr) single nucleotide variant not specified [RCV004357016] Chr2:98822604 [GRCh38]
Chr2:99439067 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.994C>T (p.Pro332Ser) single nucleotide variant not specified [RCV004337018] Chr2:98823279 [GRCh38]
Chr2:99439742 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.34C>T (p.Arg12Trp) single nucleotide variant not specified [RCV004355847] Chr2:98846767 [GRCh38]
Chr2:99463230 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.2489C>T (p.Thr830Ile) single nucleotide variant not specified [RCV004337528] Chr2:98797465 [GRCh38]
Chr2:99413928 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.439C>T (p.Arg147Trp) single nucleotide variant not specified [RCV004340274] Chr2:98832449 [GRCh38]
Chr2:99448912 [GRCh37]
Chr2:2q11.2		 uncertain significance
GRCh37/hg19 2q11.1-11.2(chr2:95773428-102550061)x3 copy number gain not provided [RCV003484069] Chr2:95773428..102550061 [GRCh37]
Chr2:2q11.1-11.2		 likely pathogenic
NM_207362.3(CRACDL):c.1033G>A (p.Glu345Lys) single nucleotide variant not specified [RCV004367023] Chr2:98823240 [GRCh38]
Chr2:99439703 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.1048C>G (p.Leu350Val) single nucleotide variant not specified [RCV004367024] Chr2:98823225 [GRCh38]
Chr2:99439688 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.1069C>T (p.Pro357Ser) single nucleotide variant not specified [RCV004367026] Chr2:98823204 [GRCh38]
Chr2:99439667 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.1612G>A (p.Glu538Lys) single nucleotide variant not specified [RCV004367034] Chr2:98822661 [GRCh38]
Chr2:99439124 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.1631G>A (p.Arg544Gln) single nucleotide variant not specified [RCV004367035] Chr2:98822642 [GRCh38]
Chr2:99439105 [GRCh37]
Chr2:2q11.2		 likely benign
NM_207362.3(CRACDL):c.1992A>C (p.Arg664Ser) single nucleotide variant not specified [RCV004367042] Chr2:98822281 [GRCh38]
Chr2:99438744 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.2003C>A (p.Pro668Gln) single nucleotide variant not specified [RCV004367044] Chr2:98822270 [GRCh38]
Chr2:99438733 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.2035A>G (p.Arg679Gly) single nucleotide variant not specified [RCV004367045] Chr2:98822238 [GRCh38]
Chr2:99438701 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.853G>A (p.Val285Met) single nucleotide variant not specified [RCV004367072] Chr2:98823420 [GRCh38]
Chr2:99439883 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.1067C>A (p.Ser356Tyr) single nucleotide variant not specified [RCV004367025] Chr2:98823206 [GRCh38]
Chr2:99439669 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.1124C>A (p.Ala375Glu) single nucleotide variant not specified [RCV004367028] Chr2:98823149 [GRCh38]
Chr2:99439612 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.1267G>A (p.Glu423Lys) single nucleotide variant not specified [RCV004367029] Chr2:98823006 [GRCh38]
Chr2:99439469 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.1457C>T (p.Ala486Val) single nucleotide variant not specified [RCV004367033] Chr2:98822816 [GRCh38]
Chr2:99439279 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.1709G>T (p.Gly570Val) single nucleotide variant not specified [RCV004367036] Chr2:98822564 [GRCh38]
Chr2:99439027 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.1842C>G (p.Asp614Glu) single nucleotide variant not specified [RCV004367037] Chr2:98822431 [GRCh38]
Chr2:99438894 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.1952G>T (p.Arg651Leu) single nucleotide variant not specified [RCV004367040] Chr2:98822321 [GRCh38]
Chr2:99438784 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.2251C>T (p.Arg751Trp) single nucleotide variant not specified [RCV004367049] Chr2:98822022 [GRCh38]
Chr2:99438485 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.2252G>A (p.Arg751Gln) single nucleotide variant not specified [RCV004367050] Chr2:98822021 [GRCh38]
Chr2:99438484 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.2551C>T (p.Arg851Trp) single nucleotide variant not specified [RCV004367055] Chr2:98797403 [GRCh38]
Chr2:99413866 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.2701T>C (p.Phe901Leu) single nucleotide variant not specified [RCV004367060] Chr2:98796168 [GRCh38]
Chr2:99412631 [GRCh37]
Chr2:2q11.2		 likely benign
NM_207362.3(CRACDL):c.397A>C (p.Lys133Gln) single nucleotide variant not specified [RCV004367062] Chr2:98832491 [GRCh38]
Chr2:99448954 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.412C>G (p.Pro138Ala) single nucleotide variant not specified [RCV004367064] Chr2:98832476 [GRCh38]
Chr2:99448939 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.590G>A (p.Arg197Gln) single nucleotide variant not specified [RCV004367066] Chr2:98827120 [GRCh38]
Chr2:99443583 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.781G>A (p.Glu261Lys) single nucleotide variant not specified [RCV004367069] Chr2:98823492 [GRCh38]
Chr2:99439955 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.1361C>G (p.Pro454Arg) single nucleotide variant not specified [RCV004367031] Chr2:98822912 [GRCh38]
Chr2:99439375 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.1405G>A (p.Glu469Lys) single nucleotide variant not specified [RCV004367032] Chr2:98822868 [GRCh38]
Chr2:99439331 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.2151G>C (p.Arg717Ser) single nucleotide variant not specified [RCV004367048] Chr2:98822122 [GRCh38]
Chr2:99438585 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.1872C>G (p.His624Gln) single nucleotide variant not specified [RCV004367038] Chr2:98822401 [GRCh38]
Chr2:99438864 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.2668G>C (p.Ala890Pro) single nucleotide variant not specified [RCV004367059] Chr2:98796201 [GRCh38]
Chr2:99412664 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.2807C>T (p.Ala936Val) single nucleotide variant not specified [RCV004367061] Chr2:98794614 [GRCh38]
Chr2:99411077 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.400A>G (p.Met134Val) single nucleotide variant not specified [RCV004367063] Chr2:98832488 [GRCh38]
Chr2:99448951 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.56G>A (p.Gly19Glu) single nucleotide variant not specified [RCV004367065] Chr2:98846745 [GRCh38]
Chr2:99463208 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.702C>G (p.Asn234Lys) single nucleotide variant not specified [RCV004367068] Chr2:98827008 [GRCh38]
Chr2:99443471 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.787G>A (p.Glu263Lys) single nucleotide variant not specified [RCV004367070] Chr2:98823486 [GRCh38]
Chr2:99439949 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.830G>A (p.Arg277His) single nucleotide variant not specified [RCV004367071] Chr2:98823443 [GRCh38]
Chr2:99439906 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.1358C>T (p.Pro453Leu) single nucleotide variant not specified [RCV004367030] Chr2:98822915 [GRCh38]
Chr2:99439378 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.1978G>A (p.Ala660Thr) single nucleotide variant not specified [RCV004367041] Chr2:98822295 [GRCh38]
Chr2:99438758 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.2065A>T (p.Thr689Ser) single nucleotide variant not specified [RCV004367046] Chr2:98822208 [GRCh38]
Chr2:99438671 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.2315C>T (p.Thr772Met) single nucleotide variant not specified [RCV004367051] Chr2:98821958 [GRCh38]
Chr2:99438421 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.2607G>C (p.Glu869Asp) single nucleotide variant not specified [RCV004367056] Chr2:98796262 [GRCh38]
Chr2:99412725 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.2615A>G (p.Lys872Arg) single nucleotide variant not specified [RCV004367057] Chr2:98796254 [GRCh38]
Chr2:99412717 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.1082C>A (p.Pro361His) single nucleotide variant not specified [RCV004367027] Chr2:98823191 [GRCh38]
Chr2:99439654 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.1883G>A (p.Gly628Asp) single nucleotide variant not specified [RCV004367039] Chr2:98822390 [GRCh38]
Chr2:99438853 [GRCh37]
Chr2:2q11.2		 likely benign
NM_207362.3(CRACDL):c.1996C>G (p.Pro666Ala) single nucleotide variant not specified [RCV004367043] Chr2:98822277 [GRCh38]
Chr2:99438740 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.2112G>C (p.Lys704Asn) single nucleotide variant not specified [RCV004367047] Chr2:98822161 [GRCh38]
Chr2:99438624 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.2374G>A (p.Glu792Lys) single nucleotide variant not specified [RCV004367053] Chr2:98821899 [GRCh38]
Chr2:99438362 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.2421G>T (p.Lys807Asn) single nucleotide variant not specified [RCV004367054] Chr2:98797533 [GRCh38]
Chr2:99413996 [GRCh37]
Chr2:2q11.2		 uncertain significance
NM_207362.3(CRACDL):c.2637C>A (p.Ser879Arg) single nucleotide variant not specified [RCV004367058] Chr2:98796232 [GRCh38]
Chr2:99412695 [GRCh37]
Chr2:2q11.2		 uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2046
Count of miRNA genes:813
Interacting mature miRNAs:969
Transcripts:ENST00000397899, ENST00000415261, ENST00000420294, ENST00000423771, ENST00000428096, ENST00000462314, ENST00000464413
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
RH45398  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37299,526,107 - 99,526,232UniSTSGRCh37
Build 36298,892,539 - 98,892,664RGDNCBI36
Celera293,731,118 - 93,731,243RGD
Cytogenetic Map2q11.2UniSTS
HuRef293,291,984 - 93,292,109UniSTS
GeneMap99-GB4 RH Map2354.7UniSTS
NCBI RH Map2543.0UniSTS
RH104208  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37299,434,826 - 99,435,011UniSTSGRCh37
Build 36298,801,258 - 98,801,443RGDNCBI36
Celera293,639,977 - 93,640,162RGD
Cytogenetic Map2q11.2UniSTS
HuRef293,200,466 - 93,200,651UniSTS
RH118430  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37299,486,435 - 99,486,762UniSTSGRCh37
Build 36298,852,867 - 98,853,194RGDNCBI36
Celera293,691,585 - 93,691,912RGD
Cytogenetic Map2q11.2UniSTS
HuRef293,252,179 - 93,252,506UniSTS
TNG Radiation Hybrid Map258458.0UniSTS
G66767  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37299,533,179 - 99,533,465UniSTSGRCh37
Build 36298,899,611 - 98,899,897RGDNCBI36
Celera293,738,194 - 93,738,480RGD
Cytogenetic Map2q11.2UniSTS
HuRef293,299,061 - 93,299,347UniSTS
WI-16262  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37299,438,577 - 99,438,706UniSTSGRCh37
Build 36298,805,009 - 98,805,138RGDNCBI36
Celera293,643,728 - 93,643,857RGD
Cytogenetic Map2q11.2UniSTS
HuRef293,204,332 - 93,204,461UniSTS
GeneMap99-GB4 RH Map2355.85UniSTS
Whitehead-RH Map2504.4UniSTS
SHGC-146666  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37299,491,459 - 99,491,732UniSTSGRCh37
Build 36298,857,891 - 98,858,164RGDNCBI36
Celera293,696,622 - 93,696,895RGD
Cytogenetic Map2q11.2UniSTS
HuRef293,257,216 - 93,257,489UniSTS
TNG Radiation Hybrid Map258462.0UniSTS
SHGC-156155  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37299,424,082 - 99,424,407UniSTSGRCh37
Build 36298,790,514 - 98,790,839RGDNCBI36
Celera293,629,233 - 93,629,558RGD
Cytogenetic Map2q11.2UniSTS
HuRef293,189,723 - 93,190,048UniSTS
TNG Radiation Hybrid Map258437.0UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 79 2 278 82 2 6 306 1424 48 552 503 78 147 147 1
Low 2293 2410 1097 212 814 128 3723 2039 2210 336 816 1050 94 1057 2541 3 2
Below cutoff 44 569 335 320 648 320 280 140 43 23 78 36 1 100 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_207362 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005263923 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005263924 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005263926 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011511093 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011511094 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011511095 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011511096 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017003971 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017003972 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017003973 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047444123 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341731 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341732 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341733 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341734 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341735 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341736 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341737 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341738 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341739 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341740 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC084377 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC068277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM922097 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF593294 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471127 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068276 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000397899   ⟹   ENSP00000380996
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl298,793,846 - 98,936,225 (-)Ensembl
RefSeq Acc Id: ENST00000415261   ⟹   ENSP00000390799
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl298,832,394 - 98,908,521 (-)Ensembl
RefSeq Acc Id: ENST00000420294   ⟹   ENSP00000403428
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl298,846,731 - 98,936,259 (-)Ensembl
RefSeq Acc Id: ENST00000423771   ⟹   ENSP00000396657
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl298,826,988 - 98,869,362 (-)Ensembl
RefSeq Acc Id: ENST00000428096   ⟹   ENSP00000387902
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl298,832,348 - 98,936,203 (-)Ensembl
RefSeq Acc Id: ENST00000462314
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl298,826,975 - 98,936,174 (-)Ensembl
RefSeq Acc Id: ENST00000464413
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl298,809,739 - 98,822,304 (-)Ensembl
RefSeq Acc Id: NM_207362   ⟹   NP_997245
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,793,846 - 98,936,225 (-)NCBI
GRCh37299,410,309 - 99,552,684 (-)RGD
Build 36298,776,741 - 98,919,116 (-)NCBI Archive
Celera293,615,445 - 93,757,699 (-)RGD
HuRef293,175,937 - 93,318,619 (-)ENTREZGENE
CHM1_1299,414,638 - 99,557,436 (-)NCBI
T2T-CHM13v2.0299,252,281 - 99,394,756 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005263923   ⟹   XP_005263980
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,793,846 - 98,869,373 (-)NCBI
GRCh37299,410,309 - 99,552,684 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005263924   ⟹   XP_005263981
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,793,846 - 98,869,373 (-)NCBI
GRCh37299,410,309 - 99,552,684 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005263926   ⟹   XP_005263983
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,793,846 - 98,936,225 (-)NCBI
GRCh37299,410,309 - 99,552,684 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011511093   ⟹   XP_011509395
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,793,846 - 98,936,225 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011511094   ⟹   XP_011509396
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,793,846 - 98,936,225 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011511095   ⟹   XP_011509397
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,793,846 - 98,869,911 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011511096   ⟹   XP_011509398
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,793,846 - 98,838,204 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017003971   ⟹   XP_016859460
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,793,846 - 98,897,644 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017003972   ⟹   XP_016859461
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,793,846 - 98,936,225 (-)NCBI
Sequence:
RefSeq Acc Id: XM_047444123   ⟹   XP_047300079
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,793,846 - 98,832,314 (-)NCBI
RefSeq Acc Id: XM_054341731   ⟹   XP_054197706
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0299,252,281 - 99,328,229 (-)NCBI
RefSeq Acc Id: XM_054341732   ⟹   XP_054197707
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0299,252,281 - 99,328,229 (-)NCBI
RefSeq Acc Id: XM_054341733   ⟹   XP_054197708
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0299,252,281 - 99,394,756 (-)NCBI
RefSeq Acc Id: XM_054341734   ⟹   XP_054197709
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0299,252,281 - 99,394,756 (-)NCBI
RefSeq Acc Id: XM_054341735   ⟹   XP_054197710
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0299,252,281 - 99,356,055 (-)NCBI
RefSeq Acc Id: XM_054341736   ⟹   XP_054197711
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0299,252,281 - 99,394,756 (-)NCBI
RefSeq Acc Id: XM_054341737   ⟹   XP_054197712
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0299,252,281 - 99,394,756 (-)NCBI
RefSeq Acc Id: XM_054341738   ⟹   XP_054197713
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0299,252,281 - 99,328,343 (-)NCBI
RefSeq Acc Id: XM_054341739   ⟹   XP_054197714
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0299,252,281 - 99,296,642 (-)NCBI
RefSeq Acc Id: XM_054341740   ⟹   XP_054197715
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0299,252,281 - 99,290,754 (-)NCBI
Protein Sequences
Protein RefSeqs NP_997245 (Get FASTA)   NCBI Sequence Viewer  
  XP_005263980 (Get FASTA)   NCBI Sequence Viewer  
  XP_005263981 (Get FASTA)   NCBI Sequence Viewer  
  XP_005263983 (Get FASTA)   NCBI Sequence Viewer  
  XP_011509395 (Get FASTA)   NCBI Sequence Viewer  
  XP_011509396 (Get FASTA)   NCBI Sequence Viewer  
  XP_011509397 (Get FASTA)   NCBI Sequence Viewer  
  XP_011509398 (Get FASTA)   NCBI Sequence Viewer  
  XP_016859460 (Get FASTA)   NCBI Sequence Viewer  
  XP_016859461 (Get FASTA)   NCBI Sequence Viewer  
  XP_047300079 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197706 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197707 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197708 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197709 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197710 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197711 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197712 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197713 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197714 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197715 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH68277 (Get FASTA)   NCBI Sequence Viewer  
  EAX01894 (Get FASTA)   NCBI Sequence Viewer  
  EAX01895 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000380996
  ENSP00000380996.2
  ENSP00000387902.1
  ENSP00000390799.1
  ENSP00000396657.1
  ENSP00000403428.1
GenBank Protein Q6NV74 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: NP_997245   ⟸   NM_207362
- UniProtKB: Q6NV74 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_005263983   ⟸   XM_005263926
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_005263981   ⟸   XM_005263924
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_005263980   ⟸   XM_005263923
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_011509396   ⟸   XM_011511094
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_011509395   ⟸   XM_011511093
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_011509397   ⟸   XM_011511095
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_011509398   ⟸   XM_011511096
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_016859461   ⟸   XM_017003972
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_016859460   ⟸   XM_017003971
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: ENSP00000396657   ⟸   ENST00000423771
RefSeq Acc Id: ENSP00000387902   ⟸   ENST00000428096
RefSeq Acc Id: ENSP00000390799   ⟸   ENST00000415261
RefSeq Acc Id: ENSP00000403428   ⟸   ENST00000420294
RefSeq Acc Id: ENSP00000380996   ⟸   ENST00000397899
RefSeq Acc Id: XP_047300079   ⟸   XM_047444123
- Peptide Label: isoform X6
RefSeq Acc Id: XP_054197712   ⟸   XM_054341737
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054197708   ⟸   XM_054341733
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054197711   ⟸   XM_054341736
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054197709   ⟸   XM_054341734
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054197710   ⟸   XM_054341735
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054197713   ⟸   XM_054341738
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054197707   ⟸   XM_054341732
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054197706   ⟸   XM_054341731
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054197714   ⟸   XM_054341739
- Peptide Label: isoform X5
RefSeq Acc Id: XP_054197715   ⟸   XM_054341740
- Peptide Label: isoform X6
Protein Domains
DUF4592

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6NV74-F1-model_v2 AlphaFold Q6NV74 1-962 view protein structure

Promoters
RGD ID:6796893
Promoter ID:HG_KWN:34074
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour
Transcripts:OTTHUMT00000329939
Position:
Human AssemblyChrPosition (strand)Source
Build 36298,805,389 - 98,805,889 (-)MPROMDB
RGD ID:6861132
Promoter ID:EPDNEW_H3731
Type:single initiation site
Name:KIAA1211L_2
Description:KIAA1211 like
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H3732  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,851,429 - 98,851,489EPDNEW
RGD ID:6861134
Promoter ID:EPDNEW_H3732
Type:initiation region
Name:KIAA1211L_1
Description:KIAA1211 like
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H3731  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,936,225 - 98,936,285EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:33454 AgrOrtholog
COSMIC CRACDL COSMIC
Ensembl Genes ENSG00000196872 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000397899 ENTREZGENE
  ENST00000397899.7 UniProtKB/Swiss-Prot
  ENST00000415261.5 UniProtKB/TrEMBL
  ENST00000420294.1 UniProtKB/TrEMBL
  ENST00000423771.5 UniProtKB/TrEMBL
  ENST00000428096.5 UniProtKB/TrEMBL
GTEx ENSG00000196872 GTEx
HGNC ID HGNC:33454 ENTREZGENE
Human Proteome Map CRACDL Human Proteome Map
InterPro DUF4592 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KIAA1211L UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:343990 UniProtKB/Swiss-Prot
NCBI Gene 343990 ENTREZGENE
PANTHER CRACD-LIKE PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR47743 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam DUF4592 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt C9JDX0_HUMAN UniProtKB/TrEMBL
  C9JFM2_HUMAN UniProtKB/TrEMBL
  C9JK00_HUMAN UniProtKB/TrEMBL
  C9JXD6_HUMAN UniProtKB/TrEMBL
  K121L_HUMAN UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-01-28 CRACDL  CRACD like  KIAA1211L  KIAA1211 like  Symbol and/or name change 5135510 APPROVED
2016-05-31 KIAA1211L  KIAA1211 like    KIAA1211-like  Symbol and/or name change 5135510 APPROVED
2012-08-21 KIAA1211L  KIAA1211-like  C2orf55  chromosome 2 open reading frame 55  Symbol and/or name change 5135510 APPROVED