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Gene: Nhsl1 (NHS-like 1) Rattus norvegicus

Analyze

Symbol:

Nhsl1

Name:

NHS-like 1

RGD ID:

1308124

Description:

Predicted to be involved in cell differentiation. Orthologous to human NHSL1 (NHS like 1); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; Brodifacoum.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC308631; NHS-like protein 1; RGD1308124; similar to KIAA1357 protein

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	NHSL1 (NHS like 1)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, Panther
Mus musculus (house mouse):	Nhsl1 (NHS like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Nhsl1 (NHS like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	NHSL1 (NHS like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	NHSL1 (NHS like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Nhsl1 (NHS like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	NHSL1 (NHS like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	NHSL1 (NHS like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Nhsl1 (NHS like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Nhsl1 (NHS like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	NHSL1 (NHS like 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	NHSL1 (NHS like 1)	Alliance	DIOPT (HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Nhsl1 (NHS like 1)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	nhsl1b (NHS-like 1b)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	nhsl1a (NHS-like 1a)	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER)
Danio rerio (zebrafish):	nhsl1a (NHS-like 1a)	Alliance	DIOPT (OrthoFinder\|OrthoInspector\|PANTHER)
Drosophila melanogaster (fruit fly):	gukh	Alliance	DIOPT (Hieranoid\|InParanoid)
Xenopus tropicalis (tropical clawed frog):	nhsl1	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	nhsl1	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	14,775,874 - 15,008,327 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	14,705,839 - 15,008,327 (+)	Ensembl				GRCr8
mRatBN7.2	1	12,956,525 - 13,188,580 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	12,956,021 - 13,187,547 (+)	Ensembl				mRatBN7.2
Rnor_6.0	1	13,472,694 - 13,705,364 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	13,595,295 - 13,705,396 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	15,159,938 - 15,389,483 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	1	13,479,076 - 13,620,447 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	11,410,484 - 11,640,940 (+)	NCBI		Celera
RGSC_v3.1	1	13,479,137 - 13,620,300 (+)	NCBI
Cytogenetic Map	1	p12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (ISO)

17alpha-ethynylestradiol (ISO)

17beta-estradiol (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2,4-dibromophenyl 2,4,5-tribromophenyl ether (ISO)

3,4-methylenedioxymethamphetamine (ISO)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (ISO)

6-propyl-2-thiouracil (EXP)

aflatoxin B1 (ISO)

aldrin (ISO)

all-trans-retinoic acid (ISO)

antirheumatic drug (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

bisphenol A (EXP,ISO)

Brodifacoum (EXP)

buta-1,3-diene (ISO)

cadmium dichloride (EXP,ISO)

caffeine (ISO)

carbamazepine (ISO)

choline (ISO)

chrysene (ISO)

cisplatin (ISO)

crocidolite asbestos (ISO)

cyclosporin A (ISO)

cypermethrin (ISO)

Dibutyl phosphate (ISO)

dicrotophos (ISO)

dioxygen (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

epoxiconazole (ISO)

ethanol (ISO)

folic acid (ISO)

FR900359 (ISO)

fulvestrant (ISO)

glycidyl methacrylate (ISO)

indometacin (ISO)

ivermectin (ISO)

L-methionine (ISO)

methoxychlor (EXP)

methyl methanesulfonate (ISO)

methylmercury chloride (ISO)

okadaic acid (ISO)

paracetamol (ISO)

perfluorohexanesulfonic acid (ISO)

perfluorooctanoic acid (ISO)

phenylmercury acetate (ISO)

pirinixic acid (ISO)

potassium dichromate (ISO)

SB 431542 (ISO)

serpentine asbestos (ISO)

sodium arsenite (ISO)

sotorasib (ISO)

sulforaphane (ISO)

testosterone (ISO)

titanium dioxide (ISO)

trametinib (ISO)

triclosan (ISO)

trimellitic anhydride (ISO)

triptonide (ISO)

valproic acid (ISO)

vincristine (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell differentiation (IBA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Genomics

Comparative Map Data

Nhsl1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	14,775,874 - 15,008,327 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	14,705,839 - 15,008,327 (+)	Ensembl				GRCr8
mRatBN7.2	1	12,956,525 - 13,188,580 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	12,956,021 - 13,187,547 (+)	Ensembl				mRatBN7.2
Rnor_6.0	1	13,472,694 - 13,705,364 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	13,595,295 - 13,705,396 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	15,159,938 - 15,389,483 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	1	13,479,076 - 13,620,447 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	11,410,484 - 11,640,940 (+)	NCBI		Celera
RGSC_v3.1	1	13,479,137 - 13,620,300 (+)	NCBI
Cytogenetic Map	1	p12	NCBI

NHSL1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	138,422,043 - 138,693,212 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	138,422,043 - 138,693,253 (-)	Ensembl			hg38	GRCh38
GRCh37	6	138,743,180 - 138,893,706 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	138,782,730 - 138,862,324 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	6	139,483,315 - 139,633,785 (-)	NCBI		Celera
Cytogenetic Map	6	q24.1	NCBI
HuRef	6	136,304,593 - 136,455,165 (-)	NCBI		HuRef
CHM1_1	6	139,005,817 - 139,156,712 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	6	139,610,527 - 139,881,772 (-)	NCBI		T2T-CHM13v2.0

Nhsl1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	18,193,419 - 18,409,640 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	18,194,733 - 18,409,640 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	10	18,317,665 - 18,533,892 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	18,318,985 - 18,533,892 (+)	Ensembl			mm10	GRCm38
MGSCv37	10	18,127,481 - 18,253,698 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	10	18,216,306 - 18,223,308 (+)	NCBI		MGSCv36	mm8
Celera	10	18,313,288 - 18,439,830 (+)	NCBI		Celera
Cytogenetic Map	10	A3	NCBI
cM Map	10	7.65	NCBI

Nhsl1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955436	21,030,615 - 21,156,154 (+)	Ensembl
ChiLan1.0	NW_004955436	20,937,231 - 21,157,254 (+)	NCBI	ChiLan1.0	ChiLan1.0

NHSL1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	158,384,558 - 158,659,509 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	156,282,155 - 156,556,894 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	136,177,592 - 136,327,633 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	140,264,366 - 140,414,486 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	140,264,366 - 140,414,486 (-)	Ensembl			panPan2	panpan1.1

NHSL1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	30,738,366 - 30,872,559 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	30,740,449 - 30,871,878 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	31,617,175 - 31,750,409 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	30,901,606 - 31,036,079 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	30,879,539 - 31,139,254 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	30,780,128 - 30,913,958 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	30,662,212 - 30,796,266 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	30,970,955 - 31,105,271 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Nhsl1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	125,794,488 - 125,920,245 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936560	5,573,459 - 5,699,587 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936560	5,574,469 - 5,699,480 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

NHSL1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	25,852,032 - 25,987,833 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	1	25,663,554 - 25,988,106 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	28,985,373 - 29,125,999 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

NHSL1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	13	34,732,987 - 34,977,281 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	13	34,900,833 - 34,977,655 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666040	6,907,880 - 7,144,753 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Nhsl1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624753	15,349,906 - 15,485,320 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624753	15,349,238 - 15,483,223 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Nhsl1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	2	218,354,819 - 218,487,375 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Nhsl1
1582 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	88
Count of miRNA genes:	42
Interacting mature miRNAs:	44
Transcripts:	ENSRNOT00000015115, ENSRNOT00000015145
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2313090	Bmd69	Bone mineral density QTL 69	4.4	0.0001	tibia mineral mass (VT:1000283)	compact volumetric bone mineral density (CMO:0001730)	1	5293229	34184556	Rat
631688	Hcas2	Hepatocarcinoma susceptibility QTL 2	3	0.0001	liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	1	7746118	52746118	Rat
4889451	Eae29	Experimental allergic encephalomyelitis QTL 29	5.51		nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis severity score (CMO:0001419)	1	7746121	52746121	Rat
70179	Xhs2	X-ray hypersensitivity QTL 2	3.2		intestine integrity trait (VT:0010554)	post-insult time to onset of moribundity (CMO:0001896)	1	1	43965634	Rat
1354647	Despr8	Despair related QTL 8		0.0000341	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	1	1	26564886	Rat
1558642	Prcr2	Prostate cancer resistance QTL 2	4.3		prostate integrity trait (VT:0010571)	area of ventral prostate occupied by tumorous lesions to total ventral prostate area ratio (CMO:0000899)	1	10379492	55379492	Rat
7421626	Bp360	Blood pressure QTL 360		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	6941022	51941022	Rat
2313070	Bss52	Bone structure and strength QTL 52	4.4	0.0001	body length (VT:0001256)	body length (CMO:0000013)	1	5293229	34184556	Rat
1357401	Bw43	Body weight QTL 43	3.75		body mass (VT:0001259)	body weight (CMO:0000012)	1	6909353	51909353	Rat
1600360	Mcs16	Mammary carcinoma susceptibility QTL 16	2.4		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	1	1	26564886	Rat
5684998	Bss101	Bone structure and strength QTL 101	3.6		tibia strength trait (VT:1000284)	tibia ultimate force (CMO:0001734)	1	6909353	51909353	Rat
5684999	Bss102	Bone structure and strength QTL 102	5.5	7e-07	tibia strength trait (VT:1000284)	tibia stiffness (CMO:0001735)	1	6909353	51909353	Rat
2302038	Pia31	Pristane induced arthritis QTL 31	5.5	0.001	blood autoantibody amount (VT:0003725)	serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002111)	1	12820494	57820494	Rat
2317755	Glom22	Glomerulus QTL 22	3.8		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	1	1	34184556	Rat
1300170	Rf6	Renal function QTL 6	3.14		renal blood flow trait (VT:2000006)	absolute change in renal blood flow rate (CMO:0001168)	1	1	28483164	Rat
631508	Sald1	Serum aldosterone level QTL 1	3.7		blood aldosterone amount (VT:0005346)	serum aldosterone level (CMO:0000487)	1	11684464	56684464	Rat
2313053	Bss51	Bone structure and strength QTL 51	3.8	0.0001	tibia length (VT:0004357)	tibia length (CMO:0000450)	1	5293229	34184556	Rat

Markers in Region

RH143252

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	13,010,344 - 13,010,511 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	13,526,241 - 13,526,407	NCBI	Rnor6.0
Rnor_5.0	1	15,213,235 - 15,213,401	UniSTS	Rnor5.0
RGSC_v3.4	1	13,429,405 - 13,429,571	UniSTS	RGSC3.4
Celera	1	11,464,392 - 11,464,558	UniSTS
RH 3.4 Map	1	144.0	UniSTS
Cytogenetic Map	1	p12	UniSTS

RH144383

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	1	14,775,339 - 14,775,559 (+)	Marker Load Pipeline
mRatBN7.2	1	12,955,567 - 12,955,787 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	13,471,990 - 13,472,209	NCBI	Rnor6.0
Rnor_5.0	1	15,159,264 - 15,159,483	UniSTS	Rnor5.0
RGSC_v3.4	1	13,374,756 - 13,374,975	UniSTS	RGSC3.4
Celera	1	11,409,780 - 11,409,999	UniSTS
RH 3.4 Map	1	132.1	UniSTS
Cytogenetic Map	1	p12	UniSTS

AU047428

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	13,123,920 - 13,124,117 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	13,639,903 - 13,640,099	NCBI	Rnor6.0
Rnor_5.0	1	15,325,200 - 15,325,396	UniSTS	Rnor5.0
RGSC_v3.4	1	13,556,389 - 13,556,585	UniSTS	RGSC3.4
Celera	1	11,577,619 - 11,577,815	UniSTS
Cytogenetic Map	1	p12	UniSTS

BE107683

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	13,178,487 - 13,178,645 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	13,696,661 - 13,696,818	NCBI	Rnor6.0
Rnor_5.0	1	15,380,788 - 15,380,945	UniSTS	Rnor5.0
RGSC_v3.4	1	13,612,120 - 13,612,277	UniSTS	RGSC3.4
Celera	1	11,632,196 - 11,632,353	UniSTS
RH 3.4 Map	1	132.6	UniSTS
Cytogenetic Map	1	p12	UniSTS

BQ205638

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	13,165,472 - 13,165,622 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	13,683,226 - 13,683,375	NCBI	Rnor6.0
Rnor_5.0	1	15,367,353 - 15,367,502	UniSTS	Rnor5.0
RGSC_v3.4	1	13,598,243 - 13,598,392	UniSTS	RGSC3.4
Celera	1	11,619,155 - 11,619,304	UniSTS
RH 3.4 Map	1	131.21	UniSTS
Cytogenetic Map	1	p12	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	86	59	6	350	186	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001427846	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_002725449	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_002725450	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_002728625	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_002728626	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006222831	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006222833	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006222834	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006227668	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006227671	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017587917	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017587918	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589823	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589824	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039098789	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262290	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262298	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262305	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262306	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262308	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAXUCZ010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000079250 ⟹ ENSRNOP00000071093

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	14,875,080 - 15,008,327 (+)	Ensembl
mRatBN7.2 Ensembl	1	13,054,955 - 13,187,547 (+)	Ensembl
Rnor_6.0 Ensembl	1	13,595,295 - 13,705,396 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000098675 ⟹ ENSRNOP00000097262

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	14,776,132 - 15,008,327 (+)	Ensembl
mRatBN7.2 Ensembl	1	12,956,021 - 13,187,547 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000102189 ⟹ ENSRNOP00000077518

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	14,776,132 - 15,008,327 (+)	Ensembl
mRatBN7.2 Ensembl	1	12,956,021 - 13,187,547 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000115660 ⟹ ENSRNOP00000094113

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	14,900,182 - 15,008,327 (+)	Ensembl
mRatBN7.2 Ensembl	1	13,122,916 - 13,187,547 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000121131 ⟹ ENSRNOP00000103902

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	14,705,839 - 15,008,327 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000130671 ⟹ ENSRNOP00000110420

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	14,876,596 - 15,008,327 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000156619 ⟹ ENSRNOP00000102979

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	14,929,319 - 15,008,327 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000160257 ⟹ ENSRNOP00000102281

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	14,943,452 - 15,008,327 (+)	Ensembl

RefSeq Acc Id:

NM_001427846 ⟹ NP_001414775

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	14,900,182 - 15,008,327 (+)	NCBI

RefSeq Acc Id:

XM_002728625 ⟹ XP_002728671

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	14,938,858 - 15,008,327 (+)	NCBI
mRatBN7.2	1	13,121,678 - 13,188,580 (+)	NCBI
Rnor_6.0	1	13,637,752 - 13,705,364 (+)	NCBI
Rnor_5.0	1	15,159,938 - 15,389,483 (+)	NCBI
RGSC_v3.4	1	13,479,076 - 13,620,447 (+)	RGD

Sequence:

show sequence

AAGAGTAGTCGGGTTCTCTTAACCACTGAGCCATCTCTCCAGCCCCACAATTCATTTTCTAAGA
AGGGAAAGAACATTCTCTTAATTCCTCGGGGGACAGGGGTGCATTGGAGACGTGTAAGGAATGG
CCCCTCTGTTTTGAAAACGAGAGTCAGTGGGATTTATTGCCGAGTTCTGTTTTATTCCATCTTC
TCCTTTAAGTCTGTACTCAAGCCTCAGTATTTCAGCGAAGACCACCCTGACTTGTTTAAAATTC
ATCAAGACCCGCCCACCTCTCTTCCCATCCTCTTCTGCTTTTGCCAAGCTCTTCTTTTACCCAC
TCTCTGATCTGCCACACAATTAGGTTTCTCATCACATAGTGTAAGCCTGAGGCAGCATTTAGTG
GATGCTCCATACCTACCTGTTTAATGAATACATCTGCGTTTGCGGTCCATTACTGAGTACACAG
AACGCTGTGGGTTGTACAGGGTTGAGTGTATTCAAGGCCTGCCCTCTTGAACCGTCTCTACTTT
CATTTGGAAAGTTGTTGTGGTGACATTGAATTTCAAAAACTTGTAGATGGTGAACAGGATCGCT
TCTTTCCGGAAGTCTACCTGTCTCTAAAGTAACACACAGAGCCAGGTCACAGTCACCTATATGT
CTGAGGGTGGACTTTGTTCTCCATTTAAGAGAGCAATATAATTGGTATTACAGCCTGGTTGTTA
CTCATTTGTCCTGTAACACTTTGATAACTTTGAAGTGTAGCCATGTAGAAGACTAAAGAGCGCA
CAGCAGAATTCCTCTGTGTTTGATAATGATACTTAGTTTCTCTGGTTTTTGTTTGTTTGCTGTT
GTTGCTCAAAAAGTATGGTTAAAAGGATCAGAAAGTTTGAGGGGCCCCCATCACCAAGCTTTCC
CGGAGGGGAGCCTCAAATATAAACTGCTATCCTTTGACTAAGATCCTTTGTTATAAAGTAAATG
TTTTGAATTAGAGGATTATTACATTTTTCCATCCAGTTACAAGTCTGGCCCCAAGCTATGAGCT
AAGAGGTCCTTTAACTTGCCTCACAGACTGTTCTGTGTGGAATGGGGTGAGGTGTGGGGCACTT
TGGCTCCTGACCTGTTTTCTTCAGTTTTTCACACGTATGTATCTCTTTTCCTCCGGGATTGTAT
TTCCCTTAATTTCCCTTCAGTTACATTGAGCTAAGGAGTAATCCAGATAATGCTTATTTAAAAC
TACTACCCAGTAAAGCCCGGGTGGGACTGTTAGAACCAGGCTGTTAAGTAATTACTGCATTTAA
AAGAGATTAAAGTAATTCCAGTAATGTATCTAATTTCTCCTTTGGAGTGAGGAAGTTAAAGGGT
TTTGTTTGTTTTTTAAGAGTTGTGTCAGCTAGATGCAAATGAGATCCCACTTCCCTAGACCCGT
CGCTGAGCTTGGAAACTAGCGAAGGGTGAGAAGACCGGGCACCCTCATTTGCATAAAAATGCTA
CAAAGTCATCTCTCAAAGCTCCCTGGTGATTCCCTTCTAAGCTCTGCTGCCTTTGGGAGAGTTC
CCTTGGTGAAGAAGGCCGAGCCTGGGGGCGTGGCTGGGAAACAAAGGTTGGTTCATTTCCCCTG
TATCAGTTCACATCCCTCACACCCAGAGTGGGATTACACTCAGACTTACTGGCTCCTGTTTAAA
AGGAGGGGGAAAAAACCAATCTGGACGTACACAGTGGCCTCGGGAAAACGGGACACACATTTGT
TTCGTCATGATGTGACTTCCAGGAAGCCAAATTATGTGTCTAGCTGTGGACTCCAGACAGGAGA
AACTTCTAGTGTGTGAGAAGGAAATGAAATGAATGGGCACCAGCCCGAGGCAGAGCTCTTGGCG
CAGGGCTCATGCAAATGAGGACGGTGATTGGCTTTCTCTTTCTGCCTGTTGTCGCTGGCTTCTC
CCAGCCTTTCAGATTAGGTTTCAGTGGGAGTTTTTCTGGTTCAAGGATTGCTAATGGTTTGTAA
CCACCTGACTATAAACTTGACCTCAGAGTTACAGCCGCTTTGGCAGTCAGATGTCGAAGGACTG
CCACCTGAGGAAGAAAGGTGGACTCTGGAGCCGTGGGGACACAGTTAGCCACCGATCCACGGGA
CCCAGCTTTTGTTTAAAAGTGACTTCTAATTCTGAAACCTATGTAGATGCTGCAGAGAGGAAAT
GGTGGTCTTCGTTAATGCGAAGATTAAATCTTTCTTTAAACTTTTTAAGAAGAAAACGGTTTCC
AACTTAGACGAGGAGAGCCGATGGACCGTCCACTATACGGCGCCGTGGCACCAGCAGGAGAATG
TGTTCCTCCCCTCCACAAGACCCCCCTGTGTTGAGGACCTGCACCGCCAAGCGAAGCTCAACCT
CAAATCAGTGCTGAGGGAATGTGACAAGCTGAGGCGCGATGGCTGCCGAAGTTCTCAGTACTAT
TCTCAGGGACCCACCTTTGCAGCCAGCTCCAGCCCAGGCGATGACTATCAAGAGGAAGATGCAG
AAACAGACCGAAAGTATTCTCTCTCTTCATCTGAAGAAGAAAGATTTATTGGTATCAGGAGACC
TAAAACGCCAACCTCAGGTGACTTCTCTGACCTTCATACTCAGACAAACTGGACCAAGTCCCTG
CCGCTGCCAACACCAGAAGAGAAGACACGACAGCAAGCCCAGACAGTCCAGGCTGATGTGGTTC
CTATTAACATAACTGGGGAGAATTTTGATCGTCAGGCCAGCCTTCGGCGGTCTCTAATTTACAC
TGACACTCTGGTAAGACGACCGAAGAAAGTCAAAAGGAGAAAGACTATTTCAGGAATCCCTGAC
ATCATTCAGAAGGAGCTAGCGTCAGCCACGGGCCAAGAGGATGATGGTAGCACCCATTCTCTAT
ACTCCCCAGACCACTACTCTACATTAGGAAGGCTTGATAGCTATCGGTCCACGGGGCAATGCTT
GGAAACCAGGGACTCTGGCTGTCAGACAGAAGAAGTGAAAGTCATCCCACCGTCAGTGAGAAGG
ATCAGGGCTCACAAGGGGCTGGGCATTGCTGCCCAGATGAGCCACCTCTCGGGTTCCTCTGGCA
ACATGTCTGTGCTGAGCGACTCGGCTGGTATCGTGTTCCCATCTCGCCTCAATAACGATACTGG
TTTCCACAGCCTTCCACGCGCTGGCGCAAGGGCAAGCACGTATTCCCTGGAGGCAAGGATGGGT
GCCCTGGGCTCTGCTGAAGATACGGATGATACTTTTCCCTACCGAGGGGGTAGCTCCCAGGGGC
CTGAAAACTTTGCACATTTAGGGGGTGCCTCGAGTACCGGGATGCTTTCGAGGCCCAAATCCCA
GCAGCTGAGGCTCTTGGAGAGCCCAGCGTGTGTGGTTTCACCGCACGCGGCCTACTCTACCAGC
GTCATCCCAAACGCCACACTGCTGTCCTCTTCGGAGGTTATTGTCATCCACACCGCTCAGAGTG
CAGGACAGCTGGACAGTAGAGTCCCCGGCTCATCCTCATACTCAAAGATAAAACCCAGAGACCA
TCCCACACCCAGGTGCTCTGCGAGAGATGAGCGCCAGTCCCCACGACATCACTGGAACGAGGGT
CATATCATTCACTCACAGGCTTTAGCCTCCGCTGCCCCCGGTGCCACCGCACTGTTATCCCTCC
GTGACTCAGAGGTCTCTCTCAATGCCCCAGCTATCAATAGGGAGAACGGGTCCCAAGCCATACT
TTATCACTGTAGAAGCAACCTGGCCTTTCCTGCCCACCCTCCGGATGTGGATGGCAAGAGCGAG
TGCAGTTCTTCAGGGGACAGGGGATGTGGCAGTTCTGAGTCCTGGGAATACAAAGCCTCCAGCA
ATGGGCGGGCTTCCCCACTGAAGCCGCACCTTGCGACTCCCGGTTGCTCTACCCCCACAAGTAA
CATGAGCAGCTGCAGCTTGGACCAAGCATCCCTCAAGGAGGATGCCAGGTCCCTGTATTCAGAG
GACCACGATGGTTACTATATGACCGCCCAGGGTGATTCTAGACACGAGGCTGGGAGCGCGTACG
GTATCAGTGATGGCTTTGGAAACCCCAGGCACAGCACGGTCAATGTTTTTGACGGAAGGGCTCA
GAGAAGCCAAGGGGATCAGGCCACTCAGCAGGATAGAATCCTCTCAAGAAACATCTCTCTGAAG
AAAGCAAAAAAACCACCACCGCCACCATCCCGGACAGATTCTCTGCGAAGGATTCCCAAGAAGA
ACAACCAGACAAATGGGCAGGTGCTCAACGAGAGCCTGATCGCCTCACTCCAGCATTCTCTGCA
GCTAAGCCTCCCTGGCCAAGGCAGCGGTTCCCCTTCCCAGAGCCCCTGCAGTGACTGTGAGGAA
CCCTGGCTCCCCAGGTCCAGAAGCCAGAGCATTGTTAGCGAGGGTAGTAGCTTGACCTCCACCA
CCACTCCCAACGTGTATTCTCTGTGCGGGCTCACTCCATCTCAGAGCGACACAAGCAGCGTCAA
GTCGGAATACGCAGACCCCTGGGGCTACTACATTGACTACACAACTTTGCAGGGAGATCCAGGG
AACCCCACAGGGGGCTGCCCAGCCAGTAGTGAGGCAGCCACTGGAAATGGGCCAGTGCGCCACA
TCCAGGAGGGGTCGAGAGCCCCAGTGCCCCAAGTGCCGGGCTGCTCCGTGAAACCAAAGATCAC
CTCACCGGAGAAGTCACAGAGAGTCACCTCTCCATCCAGTGGGTATTCTAGCCAGTCGAATACA
CCCACAGCACTCACCCCCGTGCCTGTGTTTTTAAAATCGATGTCACCAGCAAATGGGAAGGGGA
AGGCCAAGCCCAAGGTACCAGAAAGAAAATCGTCTCTGATCTCTTCAGTGTCCATCTCCTCATC
GTCCACTTCCCTCTCCTCTAATACCTCTACGGAAGGAAGTGGGACCGTGAAGAAACTGGATTCA
GCCCTGGCCTCGGCCCTTGCTCCTCCCCCTCCTCCTCTTCCCGCGCTGCCTTCTCCGAGTCTGG
CAAACAAGTCCCCCTTCCTTCCACCTCCTCCTCCTCTAGCAGATTGCTCCGAGGGCTCTCCCTT
ACCGCCCTCTCCTGTGTTCCCCCCTCCACCACCAGAAGCCCTTGTTCCCTTCTGCTCCCCCACT
GACAGGTGCCTTTCTCCTTCCCCCACAGCTTTTAGCCCCCCTCTTCCAAGATGCTCACCTCCCT
TGCCAGCACCTCCACCTTTCTTGCCCCCATCAGAACCCCCACCTGCTCCGCCTCTGGACCCCAA
ATTCATGAAAGAAAACAGGCCCTTTATCAAAAACTCTAGCCAGTCCGAATCCTCTAGGGAGGCC
CTCAGGCGGCCTGCCAACAAGGAGGAGGGCTGCCGACCCTCGATGCCCCTGATCACCACAGAAG
CTTTGCAGATGGTGCAGTTGAGGCCAGTGAGGAAGAACTCAGGTGCTGAGACGGTCCTGTTTTC
TGAACCATCAGCTCAGGAACCACGAACCCCGACTGCTCCACAGTATCACTTAAAGCCATCTGCT
TTCCTCAAATCCCGAAATAGCATAAATGAAATGGAGAGTGAAAGCCAGGCTGCCTCTGTGACGA
GCTCGCTTCCGATGCCTGCCAAGAGCCAGAGTCAGGGTGACCATGACAGTGCAGTCGAGCGTGG
CGGCCTTCAGAGCTGCAGCGATGGAGCTCCAGGCCCGGGTCCCAGCCTCAGGACCGCTCTGCTC
CCAGACTCTTCACCCAGCAGGAAGCCACCCCCCATCTCCAAGAAGCCCAAACTGTTCCTGGTGG
TACCACCTCCGCAGAGAGATTTCACAGCGGAGCCCACAGAGAACGGGAGCGAAGCTTTCTCAGG
CGTGCCCAGCCCTACCGGGGCAGAGGGGGAAGCTGGGCAGAGCCAAGAGGAGAAATCCAGCCCA
GCATCCCAAGCTGGCTCTCATGCTACGGCCCCCACCTCCGGCAGTACGGTTCTAGAAAGAGGAA
CTGCAGGGTCCTTGTCCCCTGGCGTTGTGGAAGCTAATGCCCCCATGGTCCAACCTAGTACATC
ACCGGGCCCCGCACAGGAAGAGGCAGGAGAGAACCGCGTGGATGGTGAGAGAAATGTGAAGAGC
TGCGCGTCTCCACGGGGCGGAGAAGCTGGGTTGCCGGAACCCAACACAGCTGGTCCGTCTTCAG
ACACGGCAGACGTTTCTAAAGAAGGAGGGAACGATGAGGTGCTGACCCCTACCAGACCCAGGAC
AACGGAAGACCTGTTTGCAGCCATTCACAGATCCAAAAGGAAAGTCCTTGGTCGGAAGGACTCC
GAAGATGATCACACTCGAAATCATTCTCCCTCCCCGCCTGTGACACCCACAGGTGCTGCCCCTA
GCCTGGCCTCTCCAAAGCAAGTAGGGTCCATCCAGCGAAGCCTAAAAAAGAGCAGTACCAGCAG
CGACAACTTCAAAGCTCTGCTGCTCAAGAAGGGGAGTCGCTCGGACACCAGCGCTCGCATGTCC
GCGGCGGAGATGCTCAAGTCCACGGACCCTCGATTCCAGAGATCTAGGTCGGAGCCTTCGCCAG
AGGTCCCGGACAGCCCATCCAGCTTCTCTCCCAATAAGAACAGGAGAGCTCCGGAGGAGTGGGC
CAAGAATGAAGGACTGATGCCTCGGAGTCTGTCCTTTTCCGGCCCTCGGTACAGCCGCAGCAGG
ACGCCACCCTCTGCGGCCAGCAGCAGGTACAGCATGAGGAACCGCATCCAAAGCAGCCCCATGA
CAGTCATCTCTGAGGGAGAGGGAGAGCCTGCCGAGCCCGCAGACAACAAAGTACGCAGGACCCT
GGACACTACGAGGGGATGCTCTCTGGACAGACTGGCGGGACAGGAGACGGACCGGGGCAGCCCG
CTGTGTAGCGAGGAGCCTGCCTCTGTGGATGGGATAGGAAGGGCTAAGGACGACGGTCCCTCGG
AGCAGTGTAGGGGTCCTGAACAGAAGAGTTAGTATCCAAACTTGCCTCTCATGAGTGAGGCAGG
AAGGTGAGCCGTGCATCACACTAGGAAGTCTCTGTGGCCTTTTCCTGGCTTGTGGGGACCCCAC
GCAGCATTAGTGTTGGGGAGGTCTCAGCCTTGCAAGTCTCCTAGGACTCACTCGCCATGTGGCT
TAAAAGCAAGTAGAAGCTTCAACTTCTGAAAGTGCTTCCTGGGGAAGATGGTTTCGTTTGGTTT
TGTTTTTCCCAAAATGCTGGGTGTGTGCCTATGTGTGAATGTTGAATACTTCACGCTAGCAAAT
ACACACACTAACGTTGTGTATAGGAAGAGGAGAAGAGGGCAGAGTTCAGGTAGCTAAGTAACGG
AGTCCTCTGGACCAGGGTGGTAACTGCTTTCAACTGCATTATGGGTATGGGGAATGTGTGAGTT
CAACTAAGAAGAGACCGGAGGCCGTTACTTCTCACAGGCAGTGGGCTGGCTGGTTCTAAGTATA
GAACATGACTGTGTGTACATTTACTATAGCTCAAGACACAAGCGGGAACCGTGAAGGGGCTGGG
AAGTGGCTAAGCAACTCATTGGTTCAGGTACTTTTAGGGGGCG

hide sequence

RefSeq Acc Id:

XM_002728626 ⟹ XP_002728672

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	14,874,652 - 15,008,327 (+)	NCBI
mRatBN7.2	1	13,051,911 - 13,188,580 (+)	NCBI
Rnor_6.0	1	13,567,118 - 13,705,364 (+)	NCBI
Rnor_5.0	1	15,159,938 - 15,389,483 (+)	NCBI
RGSC_v3.4	1	13,479,076 - 13,620,447 (+)	RGD

Sequence:

show sequence

CATAACTGTAATTTTGCTACTGTTATTAATCATAATGTAAATATCCGATATGCAGTATATCTGA
TAGGTGACCTCCAAAGAGGTCAAGATCTGCGGGTTGAAAAAGACCCGTGATCTAGACCATAGAC
TAGTCAGTACGTGGAGGATTGGTTAATTAATTCTGTTTTGTGGTTCGAAGGAACAGTTTCTAGA
AATCCAGTTTGTTAGTGTGCCTACATTTGGGGTAAAATTGGTATTTCAAATAACTTCAGTTGTC
TGCATAAATACAAGCAACTTTGAGGGACAGTCTTGAGACTTGGCTCTCATAGACCAGTTGTTTC
CCTTGGTTGTTTGTAGTGAGTTTTCCCCTTGCCCCTCCATTAGGTTCTTGCTAGATGTGTACAG
GATTGAGGCTACTATACAAGTTACCGGACCTGGTGCACTAAGACTGTGCACGTAGTCCAAGAGG
CTTGTGGAGGGCTCAGCTGTATAAAGTGCATCAGGGACAGCAAGGGGTTTATCATGAAGCCTAG
ACATCTTAAAGTTACAAACGCAGCTATAAATGTGGACAGCAAGTTGAAGAGGCTTGTGCACGTT
TGGGGCTCATGCATTTCTTAGAGGGCAGAAGTCTGTACTGGGGAATGGTCCCGCAGAAACTCTG
TCACACTAAACAGCACCGAGGGCTCTGACACATTTTTTTGAGGTGCTTTTTTTAAAAAATTCTT
TATTTGTGTATTTTTAATTCCCTTTACGTCTCGTTTTTCTGGAGACTGGATGTGGCATAGCCCA
GGCTGGCTGCTTAACATAGACTGGCATGGACCACTGCCTTCACCTCCAGTACCAGGAGGGTGGG
TGTGTCCCTGCTGTGCCTGAGAGCTCTATCATCTCAGAACTTGTAATAATGGTCAGCGTAGACA
CATCATTGAAATAAGAGCCGAGGTAGGTAGGACGGGCACACCTAGTAGACGTGAACTTTGGACT
CGGTGGTGTCTGATATATAACCCGTTCCCCATCCCTGACCACTGCTCTGGCATGGGGTGTGTGT
GGGCTTGAGTTTCTCTGTCTGTAGCTTGAGGGATTTGAGCAACATGGCCTCTTGAGAACCCTTA
GGTTTTCTGACCTCATCTGTACTAACGTCTGTTTTCTCAGTTAACTCTTCAGTCCCAGTGGGTG
TCTTGTGTAGCAGGAGAATCCACTGTCCTAGGGAAACTTTGTATCTTCTTCAGTGAACACCCCA
TGGGGAATGCTTGAAGAACCCTCTCTTTAAGTCTCAGAGAGTTGGAACAGACTCCTTTAGAACT
TTTTGTTTCCTGGAACAGGGTTTCCCTGCATAACCCTGGCTGTCCTGGAGCTCACCGGAGCTCA
CCTTGTAGACTAGGCTGGCCTTGAACTAGGAGATCCTTCTGCCTCTAACTCCCGTGAGCTGAGA
TCAAAGGCATTTGCTTCTACCCTGCTGCTTTTAGAGCCTGTAATCAGTTTATTTTGCAGTAAAC
TGGTTAGTGTTTATGTGACTGATTATTTACTTGTTGTCTGCCTCGCTCTGAGTGAGTGTAATTC
ACTCTGGGGTCAGGGGATGCTGCAGTTTAGGACTAGGGCACCCCAAGAAACTAGGGGAGGTGTT
ACACCCCAATGAAAGGTAGGGTTTCTAGGTGCTTTGCTTTAACTAGCAGCTGATTGCATTGTGT
TTTTGTTGTTGATGTTTTCCCCGGATTGGATTCTCTCTGGTTGGGCTGCCTTTGTAAGGCAGAG
GAGGATGGCCTCCTGGGGCCAGCCTGACTGGGTGTGCTTGGCCCCGTATTCTGCTTGCTGGTGG
CAGGAGGGGAGGCAGGAACAGGTGCGAACGTGGCTGCATTTCACCTTCGCAGAAAGCAGGAGGT
GAAGCAAAACTGCTTACCTTATCCTTGATCGATCGTGGCATTCCTTAACCCGTGTCCCCCCCAC
CTCCGGAATGCTGGACTAGAAACCGCGTTAAAAGAGCTTCTGGCGATCATACGTTTTCAGAAGT
GGGTCCAATAATCGGCAATCATATTCCTTTCGTGATCTGCAGAGAGACGTCTACATTCTACACA
GGCTTGCTTTTCCATTGCTTTGCAGGAGTTCAGAAGTTTGAGCTACCACCGGAGTGTGGTCTGT
GGAGGGGCGGGGCTCTCTGTCTCCAATGAGGTGCCTTCAGTGTCGGGCAAGCCTATCATCTTTC
GCAGGAGTGCTTACTCTGTAATCCAAGCGATAGCTACACAGCCTGTTTTATTGTTTGTGGAGTC
CTGCGGCTAGGAGCTCTTCCCACACGGGAAGGAGGGCAAGTGGGCGGTTTATGATTCTGCCCTG
TGTCGGGACAACAGAGCCGAACCCTTTGATTTCTCCTGAGTAACCTGTGTGGGTGAACTTTAAA
CTGGGGGGCCTGCTTGACGCTGGATCTTTTTCTGCAGCTCCAGAAGCCTGGCTTTCTGCCTTCA
GAAGGAAAGATGCCCTGGAGAGGCGTAGGATTACATCTAGGGATGCTAGCCATACAGCCAAGAG
TCGGGGTACCTTGGCTCTTCTTCGCAAAGTCTTGGCAAGTGTTTCTGAAATGACTATATTATTT
TTCTAAAGCTTGTACTTCTGTTTATTTTTATTATTTTTATTTTGCCTGTGGACCTCCCGCCAGA
AATTGGTGCTACAATGTGGCTAGAGTAAACCTTTTTTTTTTTTTTTAATTATCTTTAATCCGTC
ATTTTCCTTTTAGTCGGGCACGCAGAAGCACAAAAGCCTGCCTGACTCTGAGCGTTGTCTGGAT
AAGTGGGAAGGGGCAGGCCCCTTTCAAGGATCCGGGCCAATTCTAAAAAGCTAGCGTTTTGTTT
GTTGGGCCGCCCTTTGTCTCTAGAGGATTTTGATGTGAAAGAAGATGAAAAAGGAAGGCTCTGC
AGGTTCCTTCAGAATCAAGGCAAACCCAGGCTCCCTCTCACGTGCCGTGAGTTGGATAAATTTC
TCCTCCCTGTCCAGGCAGACAAAGAGGCTGTTTCGCAGCGATGGAGAGCTGTCCGTTTGTGGGC
AGCAGGTGGAGGCTGATGATGAGAATTGGATATACAGGACCCAGCCCAGAAAAGCGGTTTCCAA
CTTAGACGAGGAGAGCCGATGGACCGTCCACTATACGGCGCCGTGGCACCAGCAGGAGAATGTG
TTCCTCCCCTCCACAAGACCCCCCTGTGTTGAGGACCTGCACCGCCAAGCGAAGCTCAACCTCA
AATCAGTGCTGAGGGAATGTGACAAGCTGAGGCGCGATGGCTGCCGAAGTTCTCAGTACTATTC
TCAGGGACCCACCTTTGCAGCCAGCTCCAGCCCAGGCGATGACTATCAAGAGGAAGATGCAGAA
ACAGACCGAAAGTATTCTCTCTCTTCATCTGAAGAAGAAAGATTTATTGGTATCAGGAGACCTA
AAACGCCAACCTCAGGTGACTTCTCTGACCTTCATACTCAGACAAACTGGACCAAGTCCCTGCC
GCTGCCAACACCAGAAGAGAAGACACGACAGCAAGCCCAGACAGTCCAGGCTGATGTGGTTCCT
ATTAACATAACTGCGTCAGCCACGGGCCAAGAGGATGATGGTAGCACCCATTCTCTATACTCCC
CAGACCACTACTCTACATTAGGAAGGCTTGATAGCTATCGGTCCACGGGGCAATGCTTGGAAAC
CAGGGACTCTGGCTGTCAGACAGAAGAAGTGAAAGTCATCCCACCGTCAGTGAGAAGGATCAGG
GCTCACAAGGGGCTGGGCATTGCTGCCCAGATGAGCCACCTCTCGGGTTCCTCTGGCAACATGT
CTGTGCTGAGCGACTCGGCTGGTATCGTGTTCCCATCTCGCCTCAATAACGATACTGGTTTCCA
CAGCCTTCCACGCGCTGGCGCAAGGGCAAGCACGTATTCCCTGGAGGCAAGGATGGGTGCCCTG
GGCTCTGCTGAAGATACGGATGATACTTTTCCCTACCGAGGGGGTAGCTCCCAGGGGCCTGAAA
ACTTTGCACATTTAGGGGGTGCCTCGAGTACCGGGATGCTTTCGAGGCCCAAATCCCAGCAGCT
GAGGCTCTTGGAGAGCCCAGCGTGTGTGGTTTCACCGCACGCGGCCTACTCTACCAGCGTCATC
CCAAACGCCACACTGCTGTCCTCTTCGGAGGTTATTGTCATCCACACCGCTCAGAGTGCAGGAC
AGCTGGACAGTAGAGTCCCCGGCTCATCCTCATACTCAAAGATAAAACCCAGAGACCATCCCAC
ACCCAGGTGCTCTGCGAGAGATGAGCGCCAGTCCCCACGACATCACTGGAACGAGGGTCATATC
ATTCACTCACAGGCTTTAGCCTCCGCTGCCCCCGGTGCCACCGCACTGTTATCCCTCCGTGACT
CAGAGGTCTCTCTCAATGCCCCAGCTATCAATAGGGAGAACGGGTCCCAAGCCATACTTTATCA
CTGTAGAAGCAACCTGGCCTTTCCTGCCCACCCTCCGGATGTGGATGGCAAGAGCGAGTGCAGT
TCTTCAGGGGACAGGGGATGTGGCAGTTCTGAGTCCTGGGAATACAAAGCCTCCAGCAATGGGC
GGGCTTCCCCACTGAAGCCGCACCTTGCGACTCCCGGTTGCTCTACCCCCACAAGTAACATGAG
CAGCTGCAGCTTGGACCAAGCATCCCTCAAGGAGGATGCCAGGTCCCTGTATTCAGAGGACCAC
GATGGTTACTATATGACCGCCCAGGGTGATTCTAGACACGAGGCTGGGAGCGCGTACGGTATCA
GTGATGGCTTTGGAAACCCCAGGCACAGCACGGTCAATGTTTTTGACGGAAGGGCTCAGAGAAG
CCAAGGGGATCAGGCCACTCAGCAGGATAGAATCCTCTCAAGAAACATCTCTCTGAAGAAAGCA
AAAAAACCACCACCGCCACCATCCCGGACAGATTCTCTGCGAAGGATTCCCAAGAAGAACAACC
AGACAAATGGGCAGGTGCTCAACGAGAGCCTGATCGCCTCACTCCAGCATTCTCTGCAGCTAAG
CCTCCCTGGCCAAGGCAGCGGTTCCCCTTCCCAGAGCCCCTGCAGTGACTGTGAGGAACCCTGG
CTCCCCAGGTCCAGAAGCCAGAGCATTGTTAGCGAGGGTAGTAGCTTGACCTCCACCACCACTC
CCAACGTGTATTCTCTGTGCGGGCTCACTCCATCTCAGAGCGACACAAGCAGCGTCAAGTCGGA
ATACGCAGACCCCTGGGGCTACTACATTGACTACACAACTTTGCAGGGAGATCCAGGGAACCCC
ACAGGGGGCTGCCCAGCCAGTAGTGAGGCAGCCACTGGAAATGGGCCAGTGCGCCACATCCAGG
AGGGGTCGAGAGCCCCAGTGCCCCAAGTGCCGGGCTGCTCCGTGAAACCAAAGATCACCTCACC
GGAGAAGTCACAGAGAGTCACCTCTCCATCCAGTGGGTATTCTAGCCAGTCGAATACACCCACA
GCACTCACCCCCGTGCCTGTGTTTTTAAAATCGATGTCACCAGCAAATGGGAAGGGGAAGGCCA
AGCCCAAGGTACCAGAAAGAAAATCGTCTCTGATCTCTTCAGTGTCCATCTCCTCATCGTCCAC
TTCCCTCTCCTCTAATACCTCTACGGAAGGAAGTGGGACCGTGAAGAAACTGGATTCAGCCCTG
GCCTCGGCCCTTGCTCCTCCCCCTCCTCCTCTTCCCGCGCTGCCTTCTCCGAGTCTGGCAAACA
AGTCCCCCTTCCTTCCACCTCCTCCTCCTCTAGCAGATTGCTCCGAGGGCTCTCCCTTACCGCC
CTCTCCTGTGTTCCCCCCTCCACCACCAGAAGCCCTTGTTCCCTTCTGCTCCCCCACTGACAGG
TGCCTTTCTCCTTCCCCCACAGCTTTTAGCCCCCCTCTTCCAAGATGCTCACCTCCCTTGCCAG
CACCTCCACCTTTCTTGCCCCCATCAGAACCCCCACCTGCTCCGCCTCTGGACCCCAAATTCAT
GAAAGAAAACAGGCCCTTTATCAAAAACTCTAGCCAGTCCGAATCCTCTAGGGAGGCCCTCAGG
CGGCCTGCCAACAAGGAGGAGGGCTGCCGACCCTCGATGCCCCTGATCACCACAGAAGCTTTGC
AGATGGTGCAGTTGAGGCCAGTGAGGAAGAACTCAGGTGCTGAGACGGTCCTGTTTTCTGAACC
ATCAGCTCAGGAACCACGAACCCCGACTGCTCCACAGTATCACTTAAAGCCATCTGCTTTCCTC
AAATCCCGAAATAGCATAAATGAAATGGAGAGTGAAAGCCAGGCTGCCTCTGTGACGAGCTCGC
TTCCGATGCCTGCCAAGAGCCAGAGTCAGGGTGACCATGACAGTGCAGTCGAGCGTGGCGGCCT
TCAGAGCTGCAGCGATGGAGCTCCAGGCCCGGGTCCCAGCCTCAGGACCGCTCTGCTCCCAGAC
TCTTCACCCAGCAGGAAGCCACCCCCCATCTCCAAGAAGCCCAAACTGTTCCTGGTGGTACCAC
CTCCGCAGAGAGATTTCACAGCGGAGCCCACAGAGAACGGGAGCGAAGCTTTCTCAGGCGTGCC
CAGCCCTACCGGGGCAGAGGGGGAAGCTGGGCAGAGCCAAGAGGAGAAATCCAGCCCAGCATCC
CAAGCTGGCTCTCATGCTACGGCCCCCACCTCCGGCAGTACGGTTCTAGAAAGAGGAACTGCAG
GGTCCTTGTCCCCTGGCGTTGTGGAAGCTAATGCCCCCATGGTCCAACCTAGTACATCACCGGG
CCCCGCACAGGAAGAGGCAGGAGAGAACCGCGTGGATGGTGAGAGAAATGTGAAGAGCTGCGCG
TCTCCACGGGGCGGAGAAGCTGGGTTGCCGGAACCCAACACAGCTGGTCCGTCTTCAGACACGG
CAGACGTTTCTAAAGAAGGAGGGAACGATGAGGTGCTGACCCCTACCAGACCCAGGACAACGGA
AGACCTGTTTGCAGCCATTCACAGATCCAAAAGGAAAGTCCTTGGTCGGAAGGACTCCGAAGAT
GATCACACTCGAAATCATTCTCCCTCCCCGCCTGTGACACCCACAGGTGCTGCCCCTAGCCTGG
CCTCTCCAAAGCAAGTAGGGTCCATCCAGCGAAGCCTAAAAAAGAGCAGTACCAGCAGCGACAA
CTTCAAAGCTCTGCTGCTCAAGAAGGGGAGTCGCTCGGACACCAGCGCTCGCATGTCCGCGGCG
GAGATGCTCAAGTCCACGGACCCTCGATTCCAGAGATCTAGGTCGGAGCCTTCGCCAGAGGTCC
CGGACAGCCCATCCAGCTTCTCTCCCAATAAGAACAGGAGAGCTCCGGAGGAGTGGGCCAAGAA
TGAAGGACTGATGCCTCGGAGTCTGTCCTTTTCCGGCCCTCGGTACAGCCGCAGCAGGACGCCA
CCCTCTGCGGCCAGCAGCAGGTACAGCATGAGGAACCGCATCCAAAGCAGCCCCATGACAGTCA
TCTCTGAGGGAGAGGGAGAGCCTGCCGAGCCCGCAGACAACAAAGTACGCAGGACCCTGGACAC
TACGAGGGGATGCTCTCTGGACAGACTGGCGGGACAGGAGACGGACCGGGGCAGCCCGCTGTGT
AGCGAGGAGCCTGCCTCTGTGGATGGGATAGGAAGGGCTAAGGACGACGGTCCCTCGGAGCAGT
GTAGGGGTCCTGAACAGAAGAGTTAGTATCCAAACTTGCCTCTCATGAGTGAGGCAGGAAGGTG
AGCCGTGCATCACACTAGGAAGTCTCTGTGGCCTTTTCCTGGCTTGTGGGGACCCCACGCAGCA
TTAGTGTTGGGGAGGTCTCAGCCTTGCAAGTCTCCTAGGACTCACTCGCCATGTGGCTTAAAAG
CAAGTAGAAGCTTCAACTTCTGAAAGTGCTTCCTGGGGAAGATGGTTTCGTTTGGTTTTGTTTT
TCCCAAAATGCTGGGTGTGTGCCTATGTGTGAATGTTGAATACTTCACGCTAGCAAATACACAC
ACTAACGTTGTGTATAGGAAGAGGAGAAGAGGGCAGAGTTCAGGTAGCTAAGTAACGGAGTCCT
CTGGACCAGGGTGGTAACTGCTTTCAACTGCATTATGGGTATGGGGAATGTGTGAGTTCAACTA
AGAAGAGACCGGAGGCCGTTACTTCTCACAGGCAGTGGGCTGGCTGGTTCTAAGTATAGAACAT
GACTGTGTGTACATTTACTATAGCTCAAGACACAAGCGGGAACCGTGAAGGGGCTGGGAAGTGG
CTAAGCAACTCATTGGTTCAGGTACTTTTAGGGGGCG

hide sequence

RefSeq Acc Id:

XM_006227668 ⟹ XP_006227730

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	14,874,659 - 15,008,327 (+)	NCBI
mRatBN7.2	1	13,051,910 - 13,188,580 (+)	NCBI
Rnor_6.0	1	13,567,118 - 13,705,364 (+)	NCBI
Rnor_5.0	1	15,159,938 - 15,389,483 (+)	NCBI

Sequence:

show sequence

CATAACTGTAATTTTGCTACTGTTATTAATCATAATGTAAATATCCGATATGCAGTATATCTGA
TAGGTGACCTCCAAAGAGGTCAAGATCTGCGGGTTGAAAAAGACCCGTGATCTAGACCATAGAC
TAGTCAGTACGTGGAGGATTGGTTAATTAATTCTGTTTTGTGGTTCGAAGGAACAGTTTCTAGA
AATCCAGTTTGTTAGTGTGCCTACATTTGGGGTAAAATTGGTATTTCAAATAACTTCAGTTGTC
TGCATAAATACAAGCAACTTTGAGGGACAGTCTTGAGACTTGGCTCTCATAGACCAGTTGTTTC
CCTTGGTTGTTTGTAGTGAGTTTTCCCCTTGCCCCTCCATTAGGTTCTTGCTAGATGTGTACAG
GATTGAGGCTACTATACAAGTTACCGGACCTGGTGCACTAAGACTGTGCACGTAGTCCAAGAGG
CTTGTGGAGGGCTCAGCTGTATAAAGTGCATCAGGGACAGCAAGGGGTTTATCATGAAGCCTAG
ACATCTTAAAGTTACAAACGCAGCTATAAATGTGGACAGCAAGTTGAAGAGGCTTGTGCACGTT
TGGGGCTCATGCATTTCTTAGAGGGCAGAAGTCTGTACTGGGGAATGGTCCCGCAGAAACTCTG
TCACACTAAACAGCACCGAGGGCTCTGACACATTTTTTTGAGGTGCTTTTTTTAAAAAATTCTT
TATTTGTGTATTTTTAATTCCCTTTACGTCTCGTTTTTCTGGAGACTGGATGTGGCATAGCCCA
GGCTGGCTGCTTAACATAGACTGGCATGGACCACTGCCTTCACCTCCAGTACCAGGAGGGTGGG
TGTGTCCCTGCTGTGCCTGAGAGCTCTATCATCTCAGAACTTGTAATAATGGTCAGCGTAGACA
CATCATTGAAATAAGAGCCGAGGTAGGTAGGACGGGCACACCTAGTAGACGTGAACTTTGGACT
CGGTGGTGTCTGATATATAACCCGTTCCCCATCCCTGACCACTGCTCTGGCATGGGGTGTGTGT
GGGCTTGAGTTTCTCTGTCTGTAGCTTGAGGGATTTGAGCAACATGGCCTCTTGAGAACCCTTA
GGTTTTCTGACCTCATCTGTACTAACGTCTGTTTTCTCAGTTAACTCTTCAGTCCCAGTGGGTG
TCTTGTGTAGCAGGAGAATCCACTGTCCTAGGGAAACTTTGTATCTTCTTCAGTGAACACCCCA
TGGGGAATGCTTGAAGAACCCTCTCTTTAAGTCTCAGAGAGTTGGAACAGACTCCTTTAGAACT
TTTTGTTTCCTGGAACAGGGTTTCCCTGCATAACCCTGGCTGTCCTGGAGCTCACCGGAGCTCA
CCTTGTAGACTAGGCTGGCCTTGAACTAGGAGATCCTTCTGCCTCTAACTCCCGTGAGCTGAGA
TCAAAGGCATTTGCTTCTACCCTGCTGCTTTTAGAGCCTGTAATCAGTTTATTTTGCAGTAAAC
TGGTTAGTGTTTATGTGACTGATTATTTACTTGTTGTCTGCCTCGCTCTGAGTGAGTGTAATTC
ACTCTGGGGTCAGGGGATGCTGCAGTTTAGGACTAGGGCACCCCAAGAAACTAGGGGAGGTGTT
ACACCCCAATGAAAGGTAGGGTTTCTAGGTGCTTTGCTTTAACTAGCAGCTGATTGCATTGTGT
TTTTGTTGTTGATGTTTTCCCCGGATTGGATTCTCTCTGGTTGGGCTGCCTTTGTAAGGCAGAG
GAGGATGGCCTCCTGGGGCCAGCCTGACTGGGTGTGCTTGGCCCCGTATTCTGCTTGCTGGTGG
CAGGAGGGGAGGCAGGAACAGGTGCGAACGTGGCTGCATTTCACCTTCGCAGAAAGCAGGAGGT
GAAGCAAAACTGCTTACCTTATCCTTGATCGATCGTGGCATTCCTTAACCCGTGTCCCCCCCAC
CTCCGGAATGCTGGACTAGAAACCGCGTTAAAAGAGCTTCTGGCGATCATACGTTTTCAGAAGT
GGGTCCAATAATCGGCAATCATATTCCTTTCGTGATCTGCAGAGAGACGTCTACATTCTACACA
GGCTTGCTTTTCCATTGCTTTGCAGGAGTTCAGAAGTTTGAGCTACCACCGGAGTGTGGTCTGT
GGAGGGGCGGGGCTCTCTGTCTCCAATGAGGTGCCTTCAGTGTCGGGCAAGCCTATCATCTTTC
GCAGGAGTGCTTACTCTGTAATCCAAGCGATAGCTACACAGCCTGTTTTATTGTTTGTGGAGTC
CTGCGGCTAGGAGCTCTTCCCACACGGGAAGGAGGGCAAGTGGGCGGTTTATGATTCTGCCCTG
TGTCGGGACAACAGAGCCGAACCCTTTGATTTCTCCTGAGTAACCTGTGTGGGTGAACTTTAAA
CTGGGGGGCCTGCTTGACGCTGGATCTTTTTCTGCAGCTCCAGAAGCCTGGCTTTCTGCCTTCA
GAAGGAAAGATGCCCTGGAGAGGCGTAGGATTACATCTAGGGATGCTAGCCATACAGCCAAGAG
TCGGGGTACCTTGGCTCTTCTTCGCAAAGTCTTGGCAAGTGTTTCTGAAATGACTATATTATTT
TTCTAAAGCTTGTACTTCTGTTTATTTTTATTATTTTTATTTTGCCTGTGGACCTCCCGCCAGA
AATTGGTGCTACAATGTGGCTAGAGTAAACCTTTTTTTTTTTTTTTAATTATCTTTAATCCGTC
ATTTTCCTTTTAGTCGGGCACGCAGAAGCACAAAAGCCTGCCTGACTCTGAGCGTTGTCTGGAT
AAGTGGGAAGGGGCAGGCCCCTTTCAAGGATCCGGGCCAATTCTAAAAAGCTAGCGTTTTGTTT
GTTGGGCCGCCCTTTGTCTCTAGAGGATTTTGATGTGAAAGAAGATGAAAAAGGAAGGCTCTGC
AGGTTCCTTCAGAATCAAGGCAAACCCAGGCTCCCTCTCACGTGCCGTGAGTTGGATAAATTTC
TCCTCCCTGTCCAGGCAGACAAAGAGGCTGTTTCGCAGCGATGGAGAGCTGTCCGTTTGTGGGC
AGCAGGTGGAGGCTGATGATGAGAATTGGATATACAGGACCCAGCCCAGAAAAGCGGTTTCCAA
CTTAGACGAGGAGAGCCGATGGACCGTCCACTATACGGCGCCGTGGCACCAGCAGGAGAATGTG
TTCCTCCCCTCCACAAGACCCCCCTGTGTTGAGGACCTGCACCGCCAAGCGAAGCTCAACCTCA
AATCAGTGCTGAGGGAATGTGACAAGCTGAGGCGCGATGGCTGCCGAAGTTCTCAGTACTATTC
TCAGGGACCCACCTTTGCAGCCAGCTCCAGCCCAGGCGATGACTATCAAGAGGAAGATGCAGAA
ACAGACCGAAAGTATTCTCTCTCTTCATCTGAAGAAGAAAGATTTATTGGTATCAGGAGACCTA
AAACGCCAACCTCAGGTGACTTCTCTGACCTTCATACTCAGACAAACTGGACCAAGTCCCTGCC
GCTGCCAACACCAGAAGAGAAGACACGACAGCAAGCCCAGACAGTCCAGGCTGATGTGGTTCCT
ATTAACATAACTGGGGAGAATTTTGATCGTCAGGCCAGCCTTCGGCGGTCTCTAATTTACACTG
ACACTCTGGTAAGACGACCGAAGAAAGTCAAAAGGAGAAAGACTATTTCAGGAATCCCTGACAT
CATTCAGAAGGAGCTAGCGTCAGCCACGGGCCAAGAGGATGATGGTAGCACCCATTCTCTATAC
TCCCCAGACCACTACTCTACATTAGGAAGGCTTGATAGCTATCGGTCCACGGGGCAATGCTTGG
AAACCAGGGACTCTGGCTGTCAGACAGAAGAAGTGAAAGTCATCCCACCGTCAGTGAGAAGGAT
CAGGGCTCACAAGGGGCTGGGCATTGCTGCCCAGATGAGCCACCTCTCGGGTTCCTCTGGCAAC
ATGTCTGTGCTGAGCGACTCGGCTGGTATCGTGTTCCCATCTCGCCTCAATAACGATACTGGTT
TCCACAGCCTTCCACGCGCTGGCGCAAGGGCAAGCACGTATTCCCTGGAGGCAAGGATGGGTGC
CCTGGGCTCTGCTGAAGATACGGATGATACTTTTCCCTACCGAGGGGGTAGCTCCCAGGGGCCT
GAAAACTTTGCACATTTAGGGGGTGCCTCGAGTACCGGGATGCTTTCGAGGCCCAAATCCCAGC
AGCTGAGGCTCTTGGAGAGCCCAGCGTGTGTGGTTTCACCGCACGCGGCCTACTCTACCAGCGT
CATCCCAAACGCCACACTGCTGTCCTCTTCGGAGGTTATTGTCATCCACACCGCTCAGAGTGCA
GGACAGCTGGACAGTAGAGTCCCCGGCTCATCCTCATACTCAAAGATAAAACCCAGAGACCATC
CCACACCCAGGTGCTCTGCGAGAGATGAGCGCCAGTCCCCACGACATCACTGGAACGAGGGTCA
TATCATTCACTCACAGGCTTTAGCCTCCGCTGCCCCCGGTGCCACCGCACTGTTATCCCTCCGT
GACTCAGAGGTCTCTCTCAATGCCCCAGCTATCAATAGGGAGAACGGGTCCCAAGCCATACTTT
ATCACTGTAGAAGCAACCTGGCCTTTCCTGCCCACCCTCCGGATGTGGATGGCAAGAGCGAGTG
CAGTTCTTCAGGGGACAGGGGATGTGGCAGTTCTGAGTCCTGGGAATACAAAGCCTCCAGCAAT
GGGCGGGCTTCCCCACTGAAGCCGCACCTTGCGACTCCCGGTTGCTCTACCCCCACAAGTAACA
TGAGCAGCTGCAGCTTGGACCAAGCATCCCTCAAGGAGGATGCCAGGTCCCTGTATTCAGAGGA
CCACGATGGTTACTATATGACCGCCCAGGGTGATTCTAGACACGAGGCTGGGAGCGCGTACGGT
ATCAGTGATGGCTTTGGAAACCCCAGGCACAGCACGGTCAATGTTTTTGACGGAAGGGCTCAGA
GAAGCCAAGGGGATCAGGCCACTCAGCAGGATAGAATCCTCTCAAGAAACATCTCTCTGAAGAA
AGCAAAAAAACCACCACCGCCACCATCCCGGACAGATTCTCTGCGAAGGATTCCCAAGAAGAAC
AACCAGACAAATGGGCAGGTGCTCAACGAGAGCCTGATCGCCTCACTCCAGCATTCTCTGCAGC
TAAGCCTCCCTGGCCAAGGCAGCGGTTCCCCTTCCCAGAGCCCCTGCAGTGACTGTGAGGAACC
CTGGCTCCCCAGGTCCAGAAGCCAGAGCATTGTTAGCGAGGGTAGTAGCTTGACCTCCACCACC
ACTCCCAACGTGTATTCTCTGTGCGGGCTCACTCCATCTCAGAGCGACACAAGCAGCGTCAAGT
CGGAATACGCAGACCCCTGGGGCTACTACATTGACTACACAACTTTGCAGGGAGATCCAGGGAA
CCCCACAGGGGGCTGCCCAGCCAGTAGTGAGGCAGCCACTGGAAATGGGCCAGTGCGCCACATC
CAGGAGGGGTCGAGAGCCCCAGTGCCCCAAGTGCCGGGCTGCTCCGTGAAACCAAAGATCACCT
CACCGGAGAAGTCACAGAGAGTCACCTCTCCATCCAGTGGGTATTCTAGCCAGTCGAATACACC
CACAGCACTCACCCCCGTGCCTGTGTTTTTAAAATCGATGTCACCAGCAAATGGGAAGGGGAAG
GCCAAGCCCAAGGTACCAGAAAGAAAATCGTCTCTGATCTCTTCAGTGTCCATCTCCTCATCGT
CCACTTCCCTCTCCTCTAATACCTCTACGGAAGGAAGTGGGACCGTGAAGAAACTGGATTCAGC
CCTGGCCTCGGCCCTTGCTCCTCCCCCTCCTCCTCTTCCCGCGCTGCCTTCTCCGAGTCTGGCA
AACAAGTCCCCCTTCCTTCCACCTCCTCCTCCTCTAGCAGATTGCTCCGAGGGCTCTCCCTTAC
CGCCCTCTCCTGTGTTCCCCCCTCCACCACCAGAAGCCCTTGTTCCCTTCTGCTCCCCCACTGA
CAGGTGCCTTTCTCCTTCCCCCACAGCTTTTAGCCCCCCTCTTCCAAGATGCTCACCTCCCTTG
CCAGCACCTCCACCTTTCTTGCCCCCATCAGAACCCCCACCTGCTCCGCCTCTGGACCCCAAAT
TCATGAAAGAAAACAGGCCCTTTATCAAAAACTCTAGCCAGTCCGAATCCTCTAGGGAGGCCCT
CAGGCGGCCTGCCAACAAGGAGGAGGGCTGCCGACCCTCGATGCCCCTGATCACCACAGAAGCT
TTGCAGATGGTGCAGTTGAGGCCAGTGAGGAAGAACTCAGGTGCTGAGACGGTCCTGTTTTCTG
AACCATCAGCTCAGGAACCACGAACCCCGACTGCTCCACAGTATCACTTAAAGCCATCTGCTTT
CCTCAAATCCCGAAATAGCATAAATGAAATGGAGAGTGAAAGCCAGGCTGCCTCTGTGACGAGC
TCGCTTCCGATGCCTGCCAAGAGCCAGAGTCAGGGTGACCATGACAGTGCAGTCGAGCGTGGCG
GCCTTCAGAGCTGCAGCGATGGAGCTCCAGGCCCGGGTCCCAGCCTCAGGACCGCTCTGCTCCC
AGACTCTTCACCCAGCAGGAAGCCACCCCCCATCTCCAAGAAGCCCAAACTGTTCCTGGTGGTA
CCACCTCCGCAGAGAGATTTCACAGCGGAGCCCACAGAGAACGGGAGCGAAGCTTTCTCAGGCG
TGCCCAGCCCTACCGGGGCAGAGGGGGAAGCTGGGCAGAGCCAAGAGGAGAAATCCAGCCCAGC
ATCCCAAGCTGGCTCTCATGCTACGGCCCCCACCTCCGGCAGTACGGTTCTAGAAAGAGGAACT
GCAGGGTCCTTGTCCCCTGGCGTTGTGGAAGCTAATGCCCCCATGGTCCAACCTAGTACATCAC
CGGGCCCCGCACAGGAAGAGGCAGGAGAGAACCGCGTGGATGGTGAGAGAAATGTGAAGAGCTG
CGCGTCTCCACGGGGCGGAGAAGCTGGGTTGCCGGAACCCAACACAGCTGGTCCGTCTTCAGAC
ACGGCAGACGTTTCTAAAGAAGGAGGGAACGATGAGGTGCTGACCCCTACCAGACCCAGGACAA
CGGAAGACCTGTTTGCAGCCATTCACAGATCCAAAAGGAAAGTCCTTGGTCGGAAGGACTCCGA
AGATGATCACACTCGAAATCATTCTCCCTCCCCGCCTGTGACACCCACAGGTGCTGCCCCTAGC
CTGGCCTCTCCAAAGCAAGTAGGGTCCATCCAGCGAAGCCTAAAAAAGAGCAGTACCAGCAGCG
ACAACTTCAAAGCTCTGCTGCTCAAGAAGGGGAGTCGCTCGGACACCAGCGCTCGCATGTCCGC
GGCGGAGATGCTCAAGTCCACGGACCCTCGATTCCAGAGATCTAGGTCGGAGCCTTCGCCAGAG
GTCCCGGACAGCCCATCCAGCTTCTCTCCCAATAAGAACAGGAGAGCTCCGGAGGAGTGGGCCA
AGAATGAAGGACTGATGCCTCGGAGTCTGTCCTTTTCCGGCCCTCGGTACAGCCGCAGCAGGAC
GCCACCCTCTGCGGCCAGCAGCAGGTACAGCATGAGGAACCGCATCCAAAGCAGCCCCATGACA
GTCATCTCTGAGGGAGAGGGAGAGCCTGCCGAGCCCGCAGACAACAAAGTACGCAGGACCCTGG
ACACTACGAGGGGATGCTCTCTGGACAGACTGGCGGGACAGGAGACGGACCGGGGCAGCCCGCT
GTGTAGCGAGGAGCCTGCCTCTGTGGATGGGATAGGAAGGGCTAAGGACGACGGTCCCTCGGAG
CAGTGTAGGGGTCCTGAACAGAAGAGTTAGTATCCAAACTTGCCTCTCATGAGTGAGGCAGGAA
GGTGAGCCGTGCATCACACTAGGAAGTCTCTGTGGCCTTTTCCTGGCTTGTGGGGACCCCACGC
AGCATTAGTGTTGGGGAGGTCTCAGCCTTGCAAGTCTCCTAGGACTCACTCGCCATGTGGCTTA
AAAGCAAGTAGAAGCTTCAACTTCTGAAAGTGCTTCCTGGGGAAGATGGTTTCGTTTGGTTTTG
TTTTTCCCAAAATGCTGGGTGTGTGCCTATGTGTGAATGTTGAATACTTCACGCTAGCAAATAC
ACACACTAACGTTGTGTATAGGAAGAGGAGAAGAGGGCAGAGTTCAGGTAGCTAAGTAACGGAG
TCCTCTGGACCAGGGTGGTAACTGCTTTCAACTGCATTATGGGTATGGGGAATGTGTGAGTTCA
ACTAAGAAGAGACCGGAGGCCGTTACTTCTCACAGGCAGTGGGCTGGCTGGTTCTAAGTATAGA
ACATGACTGTGTGTACATTTACTATAGCTCAAGACACAAGCGGGAACCGTGAAGGGGCTGGGAA
GTGGCTAAGCAACTCATTGGTTCAGGTACTTTTAGGGGGCG

hide sequence

RefSeq Acc Id:

XM_017589823 ⟹ XP_017445312

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	14,775,874 - 15,008,327 (+)	NCBI
mRatBN7.2	1	12,956,525 - 13,188,580 (+)	NCBI
Rnor_6.0	1	13,472,694 - 13,705,364 (+)	NCBI

Sequence:

show sequence

CGCTTTCCTGCCTGCAAACTTCAGCGGGACTCGCCGCGGCCGCCCGGGAGCTGCTCCGGGAACT
TCCTCGGCCGCGCTGCCCGGGAGCCCGGGAGGAGCCGCGTAGCCGCGCGGCACCCGGCTAGTGT
CTCGGAGCCATCCTCGCACCTCCTCGCCGCCCGGCCTCGTCCCCGCGGCAACTGCCCAGGGACT
CTCCTTTGTGTTGAATGCGGACCCGCGCCCATCGTCCTCGGGGCCCGGCGTGAACCCCGTGATC
GCCGGTCCGCCAACACCCCGCGTGCCCAGCTATGCCCTTCCACCAACGGAGCGTGGAGCCCGCA
CGGCTGCGCCGGCCCGAGGAGGCGGCGGGGGCTCTGGCTGGGGACCCGCCGCTCTTCCGCTCGC
TGGAGCAGGTCAGCTCGCACACCCTGGTCTGCTTGCTCGCCCAGCTGGCCGACCTGTCGCGCTG
CGCTGGGGACATTTTCGGGGAGCTCGAGGGCCAGGCGGCCGCGCTGGGTCACCGCACCGCCGAG
TTGCACCGTCGCCTGGACGCCCTGCACGCTGCCGCCGCGCGCCTGGACCACCGGCGAGTGAAAA
TCCCGGTTTCCAACTTAGACGAGGAGAGCCGATGGACCGTCCACTATACGGCGCCGTGGCACCA
GCAGGAGAATGTGTTCCTCCCCTCCACAAGACCCCCCTGTGTTGAGGACCTGCACCGCCAAGCG
AAGCTCAACCTCAAATCAGTGCTGAGGGAATGTGACAAGCTGAGGCGCGATGGCTGCCGAAGTT
CTCAGTACTATTCTCAGGGACCCACCTTTGCAGCCAGCTCCAGCCCAGGCGATGACTATCAAGA
GGAAGATGCAGAAACAGACCGAAAGTATTCTCTCTCTTCATCTGAAGAAGAAAGATTTATTGGT
ATCAGGAGACCTAAAACGCCAACCTCAGGTGACTTCTCTGACCTTCATACTCAGACAAACTGGA
CCAAGTCCCTGCCGCTGCCAACACCAGAAGAGAAGACACGACAGCAAGCCCAGACAGTCCAGGC
TGATGTGGTTCCTATTAACATAACTGGGGAGAATTTTGATCGTCAGGCCAGCCTTCGGCGGTCT
CTAATTTACACTGACACTCTGGTAAGACGACCGAAGAAAGTCAAAAGGAGAAAGACTATTTCAG
GAATCCCTGACATCATTCAGAAGGAGCTAGCGTCAGCCACGGGCCAAGAGGATGATGGTAGCAC
CCATTCTCTATACTCCCCAGACCACTACTCTACATTAGGAAGGCTTGATAGCTATCGGTCCACG
GGGCAATGCTTGGAAACCAGGGACTCTGGCTGTCAGACAGAAGAAGTGAAAGTCATCCCACCGT
CAGTGAGAAGGATCAGGGCTCACAAGGGGCTGGGCATTGCTGCCCAGATGAGCCACCTCTCGGG
TTCCTCTGGCAACATGTCTGTGCTGAGCGACTCGGCTGGTATCGTGTTCCCATCTCGCCTCAAT
AACGATACTGGTTTCCACAGCCTTCCACGCGCTGGCGCAAGGGCAAGCACGTATTCCCTGGAGG
CAAGGATGGGTGCCCTGGGCTCTGCTGAAGATACGGATGATACTTTTCCCTACCGAGGGGGTAG
CTCCCAGGGGCCTGAAAACTTTGCACATTTAGGGGGTGCCTCGAGTACCGGGATGCTTTCGAGG
CCCAAATCCCAGCAGCTGAGGCTCTTGGAGAGCCCAGCGTGTGTGGTTTCACCGCACGCGGCCT
ACTCTACCAGCGTCATCCCAAACGCCACACTGCTGTCCTCTTCGGAGGTTATTGTCATCCACAC
CGCTCAGAGTGCAGGACAGCTGGACAGTAGAGTCCCCGGCTCATCCTCATACTCAAAGATAAAA
CCCAGAGACCATCCCACACCCAGGTGCTCTGCGAGAGATGAGCGCCAGTCCCCACGACATCACT
GGAACGAGGGTCATATCATTCACTCACAGGCTTTAGCCTCCGCTGCCCCCGGTGCCACCGCACT
GTTATCCCTCCGTGACTCAGAGGTCTCTCTCAATGCCCCAGCTATCAATAGGGAGAACGGGTCC
CAAGCCATACTTTATCACTGTAGAAGCAACCTGGCCTTTCCTGCCCACCCTCCGGATGTGGATG
GCAAGAGCGAGTGCAGTTCTTCAGGGGACAGGGGATGTGGCAGTTCTGAGTCCTGGGAATACAA
AGCCTCCAGCAATGGGCGGGCTTCCCCACTGAAGCCGCACCTTGCGACTCCCGGTTGCTCTACC
CCCACAAGTAACATGAGCAGCTGCAGCTTGGACCAAGCATCCCTCAAGGAGGATGCCAGGTCCC
TGTATTCAGAGGACCACGATGGTTACTATATGACCGCCCAGGGTGATTCTAGACACGAGGCTGG
GAGCGCGTACGGTATCAGTGATGGCTTTGGAAACCCCAGGCACAGCACGGTCAATGTTTTTGAC
GGAAGGGCTCAGAGAAGCCAAGGGGATCAGGCCACTCAGCAGGATAGAATCCTCTCAAGAAACA
TCTCTCTGAAGAAAGCAAAAAAACCACCACCGCCACCATCCCGGACAGATTCTCTGCGAAGGAT
TCCCAAGAAGAACAACCAGACAAATGGGCAGGTGCTCAACGAGAGCCTGATCGCCTCACTCCAG
CATTCTCTGCAGCTAAGCCTCCCTGGCCAAGGCAGCGGTTCCCCTTCCCAGAGCCCCTGCAGTG
ACTGTGAGGAACCCTGGCTCCCCAGGTCCAGAAGCCAGAGCATTGTTAGCGAGGGTAGTAGCTT
GACCTCCACCACCACTCCCAACGTGTATTCTCTGTGCGGGCTCACTCCATCTCAGAGCGACACA
AGCAGCGTCAAGTCGGAATACGCAGACCCCTGGGGCTACTACATTGACTACACAACTTTGCAGG
GAGATCCAGGGAACCCCACAGGGGGCTGCCCAGCCAGTAGTGAGGCAGCCACTGGAAATGGGCC
AGTGCGCCACATCCAGGAGGGGTCGAGAGCCCCAGTGCCCCAAGTGCCGGGCTGCTCCGTGAAA
CCAAAGATCACCTCACCGGAGAAGTCACAGAGAGTCACCTCTCCATCCAGTGGGTATTCTAGCC
AGTCGAATACACCCACAGCACTCACCCCCGTGCCTGTGTTTTTAAAATCGATGTCACCAGCAAA
TGGGAAGGGGAAGGCCAAGCCCAAGGTACCAGAAAGAAAATCGTCTCTGATCTCTTCAGTGTCC
ATCTCCTCATCGTCCACTTCCCTCTCCTCTAATACCTCTACGGAAGGAAGTGGGACCGTGAAGA
AACTGGATTCAGCCCTGGCCTCGGCCCTTGCTCCTCCCCCTCCTCCTCTTCCCGCGCTGCCTTC
TCCGAGTCTGGCAAACAAGTCCCCCTTCCTTCCACCTCCTCCTCCTCTAGCAGATTGCTCCGAG
GGCTCTCCCTTACCGCCCTCTCCTGTGTTCCCCCCTCCACCACCAGAAGCCCTTGTTCCCTTCT
GCTCCCCCACTGACAGGTGCCTTTCTCCTTCCCCCACAGCTTTTAGCCCCCCTCTTCCAAGATG
CTCACCTCCCTTGCCAGCACCTCCACCTTTCTTGCCCCCATCAGAACCCCCACCTGCTCCGCCT
CTGGACCCCAAATTCATGAAAGAAAACAGGCCCTTTATCAAAAACTCTAGCCAGTCCGAATCCT
CTAGGGAGGCCCTCAGGCGGCCTGCCAACAAGGAGGAGGGCTGCCGACCCTCGATGCCCCTGAT
CACCACAGAAGCTTTGCAGATGGTGCAGTTGAGGCCAGTGAGGAAGAACTCAGGTGCTGAGACG
GTCCTGTTTTCTGAACCATCAGCTCAGGAACCACGAACCCCGACTGCTCCACAGTATCACTTAA
AGCCATCTGCTTTCCTCAAATCCCGAAATAGCATAAATGAAATGGAGAGTGAAAGCCAGGCTGC
CTCTGTGACGAGCTCGCTTCCGATGCCTGCCAAGAGCCAGAGTCAGGGTGACCATGACAGTGCA
GTCGAGCGTGGCGGCCTTCAGAGCTGCAGCGATGGAGCTCCAGGCCCGGGTCCCAGCCTCAGGA
CCGCTCTGCTCCCAGACTCTTCACCCAGCAGGAAGCCACCCCCCATCTCCAAGAAGCCCAAACT
GTTCCTGGTGGTACCACCTCCGCAGAGAGATTTCACAGCGGAGCCCACAGAGAACGGGAGCGAA
GCTTTCTCAGGCGTGCCCAGCCCTACCGGGGCAGAGGGGGAAGCTGGGCAGAGCCAAGAGGAGA
AATCCAGCCCAGCATCCCAAGCTGGCTCTCATGCTACGGCCCCCACCTCCGGCAGTACGGTTCT
AGAAAGAGGAACTGCAGGGTCCTTGTCCCCTGGCGTTGTGGAAGCTAATGCCCCCATGGTCCAA
CCTAGTACATCACCGGGCCCCGCACAGGAAGAGGCAGGAGAGAACCGCGTGGATGGTGAGAGAA
ATGTGAAGAGCTGCGCGTCTCCACGGGGCGGAGAAGCTGGGTTGCCGGAACCCAACACAGCTGG
TCCGTCTTCAGACACGGCAGACGTTTCTAAAGAAGGAGGGAACGATGAGGTGCTGACCCCTACC
AGACCCAGGACAACGGAAGACCTGTTTGCAGCCATTCACAGATCCAAAAGGAAAGTCCTTGGTC
GGAAGGACTCCGAAGATGATCACACTCGAAATCATTCTCCCTCCCCGCCTGTGACACCCACAGG
TGCTGCCCCTAGCCTGGCCTCTCCAAAGCAAGTAGGGTCCATCCAGCGAAGCCTAAAAAAGAGC
AGTACCAGCAGCGACAACTTCAAAGCTCTGCTGCTCAAGAAGGGGAGTCGCTCGGACACCAGCG
CTCGCATGTCCGCGGCGGAGATGCTCAAGTCCACGGACCCTCGATTCCAGAGATCTAGGTCGGA
GCCTTCGCCAGAGGTCCCGGACAGCCCATCCAGCTTCTCTCCCAATAAGAACAGGAGAGCTCCG
GAGGAGTGGGCCAAGAATGAAGGACTGATGCCTCGGAGTCTGTCCTTTTCCGGCCCTCGGTACA
GCCGCAGCAGGACGCCACCCTCTGCGGCCAGCAGCAGGTACAGCATGAGGAACCGCATCCAAAG
CAGCCCCATGACAGTCATCTCTGAGGGAGAGGGAGAGCCTGCCGAGCCCGCAGACAACAAAGTA
CGCAGGACCCTGGACACTACGAGGGGATGCTCTCTGGACAGACTGGCGGGACAGGAGACGGACC
GGGGCAGCCCGCTGTGTAGCGAGGAGCCTGCCTCTGTGGATGGGATAGGAAGGGCTAAGGACGA
CGGTCCCTCGGAGCAGTGTAGGGGTCCTGAACAGAAGAGTTAGTATCCAAACTTGCCTCTCATG
AGTGAGGCAGGAAGGTGAGCCGTGCATCACACTAGGAAGTCTCTGTGGCCTTTTCCTGGCTTGT
GGGGACCCCACGCAGCATTAGTGTTGGGGAGGTCTCAGCCTTGCAAGTCTCCTAGGACTCACTC
GCCATGTGGCTTAAAAGCAAGTAGAAGCTTCAACTTCTGAAAGTGCTTCCTGGGGAAGATGGTT
TCGTTTGGTTTTGTTTTTCCCAAAATGCTGGGTGTGTGCCTATGTGTGAATGTTGAATACTTCA
CGCTAGCAAATACACACACTAACGTTGTGTATAGGAAGAGGAGAAGAGGGCAGAGTTCAGGTAG
CTAAGTAACGGAGTCCTCTGGACCAGGGTGGTAACTGCTTTCAACTGCATTATGGGTATGGGGA
ATGTGTGAGTTCAACTAAGAAGAGACCGGAGGCCGTTACTTCTCACAGGCAGTGGGCTGGCTGG
TTCTAAGTATAGAACATGACTGTGTGTACATTTACTATAGCTCAAGACACAAGCGGGAACCGTG
AAGGGGCTGGGAAGTGGCTAAGCAACTCATTGGTTCAGGTACTTTTAGGGGGCG

hide sequence

RefSeq Acc Id:

XM_017589824 ⟹ XP_017445313

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	14,775,874 - 15,008,327 (+)	NCBI
mRatBN7.2	1	12,956,525 - 13,188,580 (+)	NCBI
Rnor_6.0	1	13,472,695 - 13,705,364 (+)	NCBI

Sequence:

show sequence

GCTTTCCTGCCTGCAAACTTCAGCGGGACTCGCCGCGGCCGCCCGGGAGCTGCTCCGGGAACTT
CCTCGGCCGCGCTGCCCGGGAGCCCGGGAGGAGCCGCGTAGCCGCGCGGCACCCGGCTAGTGTC
TCGGAGCCATCCTCGCACCTCCTCGCCGCCCGGCCTCGTCCCCGCGGCAACTGCCCAGGGACTC
TCCTTTGTGTTGAATGCGGACCCGCGCCCATCGTCCTCGGGGCCCGGCGTGAACCCCGTGATCG
CCGGTCCGCCAACACCCCGCGTGCCCAGCTATGCCCTTCCACCAACGGAGCGTGGAGCCCGCAC
GGCTGCGCCGGCCCGAGGAGGCGGCGGGGGCTCTGGCTGGGGACCCGCCGCTCTTCCGCTCGCT
GGAGCAGGTCAGCTCGCACACCCTGGTCTGCTTGCTCGCCCAGCTGGCCGACCTGTCGCGCTGC
GCTGGGGACATTTTCGGGGAGCTCGAGGGCCAGGCGGCCGCGCTGGGTCACCGCACCGCCGAGT
TGCACCGTCGCCTGGACGCCCTGCACGCTGCCGCCGCGCGCCTGGACCACCGGCGAGTGAAAAT
CCCGGTTTCCAACTTAGACGAGGAGAGCCGATGGACCGTCCACTATACGGCGCCGTGGCACCAG
CAGGAGAATGTGTTCCTCCCCTCCACAAGACCCCCCTGTGTTGAGGACCTGCACCGCCAAGCGA
AGCTCAACCTCAAATCAGTGCTGAGGGAATGTGACAAGCTGAGGCGCGATGGCTGCCGAAGTTC
TCAGTACTATTCTCAGGGACCCACCTTTGCAGCCAGCTCCAGCCCAGGCGATGACTATCAAGAG
GAAGATGCAGAAACAGACCGAAAGTATTCTCTCTCTTCATCTGAAGAAGAAAGATTTATTGGTA
TCAGGAGACCTAAAACGCCAACCTCAGGTGACTTCTCTGACCTTCATACTCAGACAAACTGGAC
CAAGTCCCTGCCGCTGCCAACACCAGAAGAGAAGACACGACAGCAAGCCCAGACAGTCCAGGCT
GATGTGGTTCCTATTAACATAACTGCGTCAGCCACGGGCCAAGAGGATGATGGTAGCACCCATT
CTCTATACTCCCCAGACCACTACTCTACATTAGGAAGGCTTGATAGCTATCGGTCCACGGGGCA
ATGCTTGGAAACCAGGGACTCTGGCTGTCAGACAGAAGAAGTGAAAGTCATCCCACCGTCAGTG
AGAAGGATCAGGGCTCACAAGGGGCTGGGCATTGCTGCCCAGATGAGCCACCTCTCGGGTTCCT
CTGGCAACATGTCTGTGCTGAGCGACTCGGCTGGTATCGTGTTCCCATCTCGCCTCAATAACGA
TACTGGTTTCCACAGCCTTCCACGCGCTGGCGCAAGGGCAAGCACGTATTCCCTGGAGGCAAGG
ATGGGTGCCCTGGGCTCTGCTGAAGATACGGATGATACTTTTCCCTACCGAGGGGGTAGCTCCC
AGGGGCCTGAAAACTTTGCACATTTAGGGGGTGCCTCGAGTACCGGGATGCTTTCGAGGCCCAA
ATCCCAGCAGCTGAGGCTCTTGGAGAGCCCAGCGTGTGTGGTTTCACCGCACGCGGCCTACTCT
ACCAGCGTCATCCCAAACGCCACACTGCTGTCCTCTTCGGAGGTTATTGTCATCCACACCGCTC
AGAGTGCAGGACAGCTGGACAGTAGAGTCCCCGGCTCATCCTCATACTCAAAGATAAAACCCAG
AGACCATCCCACACCCAGGTGCTCTGCGAGAGATGAGCGCCAGTCCCCACGACATCACTGGAAC
GAGGGTCATATCATTCACTCACAGGCTTTAGCCTCCGCTGCCCCCGGTGCCACCGCACTGTTAT
CCCTCCGTGACTCAGAGGTCTCTCTCAATGCCCCAGCTATCAATAGGGAGAACGGGTCCCAAGC
CATACTTTATCACTGTAGAAGCAACCTGGCCTTTCCTGCCCACCCTCCGGATGTGGATGGCAAG
AGCGAGTGCAGTTCTTCAGGGGACAGGGGATGTGGCAGTTCTGAGTCCTGGGAATACAAAGCCT
CCAGCAATGGGCGGGCTTCCCCACTGAAGCCGCACCTTGCGACTCCCGGTTGCTCTACCCCCAC
AAGTAACATGAGCAGCTGCAGCTTGGACCAAGCATCCCTCAAGGAGGATGCCAGGTCCCTGTAT
TCAGAGGACCACGATGGTTACTATATGACCGCCCAGGGTGATTCTAGACACGAGGCTGGGAGCG
CGTACGGTATCAGTGATGGCTTTGGAAACCCCAGGCACAGCACGGTCAATGTTTTTGACGGAAG
GGCTCAGAGAAGCCAAGGGGATCAGGCCACTCAGCAGGATAGAATCCTCTCAAGAAACATCTCT
CTGAAGAAAGCAAAAAAACCACCACCGCCACCATCCCGGACAGATTCTCTGCGAAGGATTCCCA
AGAAGAACAACCAGACAAATGGGCAGGTGCTCAACGAGAGCCTGATCGCCTCACTCCAGCATTC
TCTGCAGCTAAGCCTCCCTGGCCAAGGCAGCGGTTCCCCTTCCCAGAGCCCCTGCAGTGACTGT
GAGGAACCCTGGCTCCCCAGGTCCAGAAGCCAGAGCATTGTTAGCGAGGGTAGTAGCTTGACCT
CCACCACCACTCCCAACGTGTATTCTCTGTGCGGGCTCACTCCATCTCAGAGCGACACAAGCAG
CGTCAAGTCGGAATACGCAGACCCCTGGGGCTACTACATTGACTACACAACTTTGCAGGGAGAT
CCAGGGAACCCCACAGGGGGCTGCCCAGCCAGTAGTGAGGCAGCCACTGGAAATGGGCCAGTGC
GCCACATCCAGGAGGGGTCGAGAGCCCCAGTGCCCCAAGTGCCGGGCTGCTCCGTGAAACCAAA
GATCACCTCACCGGAGAAGTCACAGAGAGTCACCTCTCCATCCAGTGGGTATTCTAGCCAGTCG
AATACACCCACAGCACTCACCCCCGTGCCTGTGTTTTTAAAATCGATGTCACCAGCAAATGGGA
AGGGGAAGGCCAAGCCCAAGGTACCAGAAAGAAAATCGTCTCTGATCTCTTCAGTGTCCATCTC
CTCATCGTCCACTTCCCTCTCCTCTAATACCTCTACGGAAGGAAGTGGGACCGTGAAGAAACTG
GATTCAGCCCTGGCCTCGGCCCTTGCTCCTCCCCCTCCTCCTCTTCCCGCGCTGCCTTCTCCGA
GTCTGGCAAACAAGTCCCCCTTCCTTCCACCTCCTCCTCCTCTAGCAGATTGCTCCGAGGGCTC
TCCCTTACCGCCCTCTCCTGTGTTCCCCCCTCCACCACCAGAAGCCCTTGTTCCCTTCTGCTCC
CCCACTGACAGGTGCCTTTCTCCTTCCCCCACAGCTTTTAGCCCCCCTCTTCCAAGATGCTCAC
CTCCCTTGCCAGCACCTCCACCTTTCTTGCCCCCATCAGAACCCCCACCTGCTCCGCCTCTGGA
CCCCAAATTCATGAAAGAAAACAGGCCCTTTATCAAAAACTCTAGCCAGTCCGAATCCTCTAGG
GAGGCCCTCAGGCGGCCTGCCAACAAGGAGGAGGGCTGCCGACCCTCGATGCCCCTGATCACCA
CAGAAGCTTTGCAGATGGTGCAGTTGAGGCCAGTGAGGAAGAACTCAGGTGCTGAGACGGTCCT
GTTTTCTGAACCATCAGCTCAGGAACCACGAACCCCGACTGCTCCACAGTATCACTTAAAGCCA
TCTGCTTTCCTCAAATCCCGAAATAGCATAAATGAAATGGAGAGTGAAAGCCAGGCTGCCTCTG
TGACGAGCTCGCTTCCGATGCCTGCCAAGAGCCAGAGTCAGGGTGACCATGACAGTGCAGTCGA
GCGTGGCGGCCTTCAGAGCTGCAGCGATGGAGCTCCAGGCCCGGGTCCCAGCCTCAGGACCGCT
CTGCTCCCAGACTCTTCACCCAGCAGGAAGCCACCCCCCATCTCCAAGAAGCCCAAACTGTTCC
TGGTGGTACCACCTCCGCAGAGAGATTTCACAGCGGAGCCCACAGAGAACGGGAGCGAAGCTTT
CTCAGGCGTGCCCAGCCCTACCGGGGCAGAGGGGGAAGCTGGGCAGAGCCAAGAGGAGAAATCC
AGCCCAGCATCCCAAGCTGGCTCTCATGCTACGGCCCCCACCTCCGGCAGTACGGTTCTAGAAA
GAGGAACTGCAGGGTCCTTGTCCCCTGGCGTTGTGGAAGCTAATGCCCCCATGGTCCAACCTAG
TACATCACCGGGCCCCGCACAGGAAGAGGCAGGAGAGAACCGCGTGGATGGTGAGAGAAATGTG
AAGAGCTGCGCGTCTCCACGGGGCGGAGAAGCTGGGTTGCCGGAACCCAACACAGCTGGTCCGT
CTTCAGACACGGCAGACGTTTCTAAAGAAGGAGGGAACGATGAGGTGCTGACCCCTACCAGACC
CAGGACAACGGAAGACCTGTTTGCAGCCATTCACAGATCCAAAAGGAAAGTCCTTGGTCGGAAG
GACTCCGAAGATGATCACACTCGAAATCATTCTCCCTCCCCGCCTGTGACACCCACAGGTGCTG
CCCCTAGCCTGGCCTCTCCAAAGCAAGTAGGGTCCATCCAGCGAAGCCTAAAAAAGAGCAGTAC
CAGCAGCGACAACTTCAAAGCTCTGCTGCTCAAGAAGGGGAGTCGCTCGGACACCAGCGCTCGC
ATGTCCGCGGCGGAGATGCTCAAGTCCACGGACCCTCGATTCCAGAGATCTAGGTCGGAGCCTT
CGCCAGAGGTCCCGGACAGCCCATCCAGCTTCTCTCCCAATAAGAACAGGAGAGCTCCGGAGGA
GTGGGCCAAGAATGAAGGACTGATGCCTCGGAGTCTGTCCTTTTCCGGCCCTCGGTACAGCCGC
AGCAGGACGCCACCCTCTGCGGCCAGCAGCAGGTACAGCATGAGGAACCGCATCCAAAGCAGCC
CCATGACAGTCATCTCTGAGGGAGAGGGAGAGCCTGCCGAGCCCGCAGACAACAAAGTACGCAG
GACCCTGGACACTACGAGGGGATGCTCTCTGGACAGACTGGCGGGACAGGAGACGGACCGGGGC
AGCCCGCTGTGTAGCGAGGAGCCTGCCTCTGTGGATGGGATAGGAAGGGCTAAGGACGACGGTC
CCTCGGAGCAGTGTAGGGGTCCTGAACAGAAGAGTTAGTATCCAAACTTGCCTCTCATGAGTGA
GGCAGGAAGGTGAGCCGTGCATCACACTAGGAAGTCTCTGTGGCCTTTTCCTGGCTTGTGGGGA
CCCCACGCAGCATTAGTGTTGGGGAGGTCTCAGCCTTGCAAGTCTCCTAGGACTCACTCGCCAT
GTGGCTTAAAAGCAAGTAGAAGCTTCAACTTCTGAAAGTGCTTCCTGGGGAAGATGGTTTCGTT
TGGTTTTGTTTTTCCCAAAATGCTGGGTGTGTGCCTATGTGTGAATGTTGAATACTTCACGCTA
GCAAATACACACACTAACGTTGTGTATAGGAAGAGGAGAAGAGGGCAGAGTTCAGGTAGCTAAG
TAACGGAGTCCTCTGGACCAGGGTGGTAACTGCTTTCAACTGCATTATGGGTATGGGGAATGTG
TGAGTTCAACTAAGAAGAGACCGGAGGCCGTTACTTCTCACAGGCAGTGGGCTGGCTGGTTCTA
AGTATAGAACATGACTGTGTGTACATTTACTATAGCTCAAGACACAAGCGGGAACCGTGAAGGG
GCTGGGAAGTGGCTAAGCAACTCATTGGTTCAGGTACTTTTAGGGGGCG

hide sequence

RefSeq Acc Id:

XM_039098789 ⟹ XP_038954717

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	14,964,666 - 15,008,327 (+)	NCBI
mRatBN7.2	1	13,144,912 - 13,188,580 (+)	NCBI

RefSeq Acc Id:

XM_063262290 ⟹ XP_063118360

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	14,938,858 - 15,008,327 (+)	NCBI

RefSeq Acc Id:

XM_063262298 ⟹ XP_063118368

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	14,899,493 - 15,008,327 (+)	NCBI

RefSeq Acc Id:

XM_063262305 ⟹ XP_063118375

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	14,896,875 - 15,008,327 (+)	NCBI

RefSeq Acc Id:

XM_063262306 ⟹ XP_063118376

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	14,875,510 - 15,008,327 (+)	NCBI

RefSeq Acc Id:

XM_063262308 ⟹ XP_063118378

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	14,847,861 - 15,008,327 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001414775	(Get FASTA)	NCBI Sequence Viewer
	XP_002728671	(Get FASTA)	NCBI Sequence Viewer
	XP_002728672	(Get FASTA)	NCBI Sequence Viewer
	XP_006227730	(Get FASTA)	NCBI Sequence Viewer
	XP_017445312	(Get FASTA)	NCBI Sequence Viewer
	XP_017445313	(Get FASTA)	NCBI Sequence Viewer
	XP_038954717	(Get FASTA)	NCBI Sequence Viewer
	XP_063118360	(Get FASTA)	NCBI Sequence Viewer
	XP_063118368	(Get FASTA)	NCBI Sequence Viewer
	XP_063118375	(Get FASTA)	NCBI Sequence Viewer
	XP_063118376	(Get FASTA)	NCBI Sequence Viewer
	XP_063118378	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000071093
	ENSRNOP00000071093.2
	ENSRNOP00000077518
	ENSRNOP00000077518.1
	ENSRNOP00000094113
	ENSRNOP00000094113.2
	ENSRNOP00000097262
	ENSRNOP00000097262.1
	ENSRNOP00000102281
	ENSRNOP00000102281.1
	ENSRNOP00000102979
	ENSRNOP00000102979.1
	ENSRNOP00000103902.1
	ENSRNOP00000110420.1

RefSeq Acc Id:	XP_002728672 ⟸ XM_002728626
- Peptide Label:	isoform X4
- UniProtKB:	A6JPA2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKKEGSAGSFRIKANPGSLSRAVSWINFSSLSRQTKRLFRSDGELSVCGQQVEADDENWIYRTQ PRKAVSNLDEESRWTVHYTAPWHQQENVFLPSTRPPCVEDLHRQAKLNLKSVLRECDKLRRDGC RSSQYYSQGPTFAASSSPGDDYQEEDAETDRKYSLSSSEEERFIGIRRPKTPTSGDFSDLHTQT NWTKSLPLPTPEEKTRQQAQTVQADVVPINITASATGQEDDGSTHSLYSPDHYSTLGRLDSYRS TGQCLETRDSGCQTEEVKVIPPSVRRIRAHKGLGIAAQMSHLSGSSGNMSVLSDSAGIVFPSRL NNDTGFHSLPRAGARASTYSLEARMGALGSAEDTDDTFPYRGGSSQGPENFAHLGGASSTGMLS RPKSQQLRLLESPACVVSPHAAYSTSVIPNATLLSSSEVIVIHTAQSAGQLDSRVPGSSSYSKI KPRDHPTPRCSARDERQSPRHHWNEGHIIHSQALASAAPGATALLSLRDSEVSLNAPAINRENG SQAILYHCRSNLAFPAHPPDVDGKSECSSSGDRGCGSSESWEYKASSNGRASPLKPHLATPGCS TPTSNMSSCSLDQASLKEDARSLYSEDHDGYYMTAQGDSRHEAGSAYGISDGFGNPRHSTVNVF DGRAQRSQGDQATQQDRILSRNISLKKAKKPPPPPSRTDSLRRIPKKNNQTNGQVLNESLIASL QHSLQLSLPGQGSGSPSQSPCSDCEEPWLPRSRSQSIVSEGSSLTSTTTPNVYSLCGLTPSQSD TSSVKSEYADPWGYYIDYTTLQGDPGNPTGGCPASSEAATGNGPVRHIQEGSRAPVPQVPGCSV KPKITSPEKSQRVTSPSSGYSSQSNTPTALTPVPVFLKSMSPANGKGKAKPKVPERKSSLISSV SISSSSTSLSSNTSTEGSGTVKKLDSALASALAPPPPPLPALPSPSLANKSPFLPPPPPLADCS EGSPLPPSPVFPPPPPEALVPFCSPTDRCLSPSPTAFSPPLPRCSPPLPAPPPFLPPSEPPPAP PLDPKFMKENRPFIKNSSQSESSREALRRPANKEEGCRPSMPLITTEALQMVQLRPVRKNSGAE TVLFSEPSAQEPRTPTAPQYHLKPSAFLKSRNSINEMESESQAASVTSSLPMPAKSQSQGDHDS AVERGGLQSCSDGAPGPGPSLRTALLPDSSPSRKPPPISKKPKLFLVVPPPQRDFTAEPTENGS EAFSGVPSPTGAEGEAGQSQEEKSSPASQAGSHATAPTSGSTVLERGTAGSLSPGVVEANAPMV QPSTSPGPAQEEAGENRVDGERNVKSCASPRGGEAGLPEPNTAGPSSDTADVSKEGGNDEVLTP TRPRTTEDLFAAIHRSKRKVLGRKDSEDDHTRNHSPSPPVTPTGAAPSLASPKQVGSIQRSLKK SSTSSDNFKALLLKKGSRSDTSARMSAAEMLKSTDPRFQRSRSEPSPEVPDSPSSFSPNKNRRA PEEWAKNEGLMPRSLSFSGPRYSRSRTPPSAASSRYSMRNRIQSSPMTVISEGEGEPAEPADNK VRRTLDTTRGCSLDRLAGQETDRGSPLCSEEPASVDGIGRAKDDGPSEQCRGPEQKS hide sequence

RefSeq Acc Id:	XP_002728671 ⟸ XM_002728625
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I6GKL0 (UniProtKB/TrEMBL), A6JPA2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVVFVNAKIKSFFKLFKKKTVSNLDEESRWTVHYTAPWHQQENVFLPSTRPPCVEDLHRQAKLN LKSVLRECDKLRRDGCRSSQYYSQGPTFAASSSPGDDYQEEDAETDRKYSLSSSEEERFIGIRR PKTPTSGDFSDLHTQTNWTKSLPLPTPEEKTRQQAQTVQADVVPINITGENFDRQASLRRSLIY TDTLVRRPKKVKRRKTISGIPDIIQKELASATGQEDDGSTHSLYSPDHYSTLGRLDSYRSTGQC LETRDSGCQTEEVKVIPPSVRRIRAHKGLGIAAQMSHLSGSSGNMSVLSDSAGIVFPSRLNNDT GFHSLPRAGARASTYSLEARMGALGSAEDTDDTFPYRGGSSQGPENFAHLGGASSTGMLSRPKS QQLRLLESPACVVSPHAAYSTSVIPNATLLSSSEVIVIHTAQSAGQLDSRVPGSSSYSKIKPRD HPTPRCSARDERQSPRHHWNEGHIIHSQALASAAPGATALLSLRDSEVSLNAPAINRENGSQAI LYHCRSNLAFPAHPPDVDGKSECSSSGDRGCGSSESWEYKASSNGRASPLKPHLATPGCSTPTS NMSSCSLDQASLKEDARSLYSEDHDGYYMTAQGDSRHEAGSAYGISDGFGNPRHSTVNVFDGRA QRSQGDQATQQDRILSRNISLKKAKKPPPPPSRTDSLRRIPKKNNQTNGQVLNESLIASLQHSL QLSLPGQGSGSPSQSPCSDCEEPWLPRSRSQSIVSEGSSLTSTTTPNVYSLCGLTPSQSDTSSV KSEYADPWGYYIDYTTLQGDPGNPTGGCPASSEAATGNGPVRHIQEGSRAPVPQVPGCSVKPKI TSPEKSQRVTSPSSGYSSQSNTPTALTPVPVFLKSMSPANGKGKAKPKVPERKSSLISSVSISS SSTSLSSNTSTEGSGTVKKLDSALASALAPPPPPLPALPSPSLANKSPFLPPPPPLADCSEGSP LPPSPVFPPPPPEALVPFCSPTDRCLSPSPTAFSPPLPRCSPPLPAPPPFLPPSEPPPAPPLDP KFMKENRPFIKNSSQSESSREALRRPANKEEGCRPSMPLITTEALQMVQLRPVRKNSGAETVLF SEPSAQEPRTPTAPQYHLKPSAFLKSRNSINEMESESQAASVTSSLPMPAKSQSQGDHDSAVER GGLQSCSDGAPGPGPSLRTALLPDSSPSRKPPPISKKPKLFLVVPPPQRDFTAEPTENGSEAFS GVPSPTGAEGEAGQSQEEKSSPASQAGSHATAPTSGSTVLERGTAGSLSPGVVEANAPMVQPST SPGPAQEEAGENRVDGERNVKSCASPRGGEAGLPEPNTAGPSSDTADVSKEGGNDEVLTPTRPR TTEDLFAAIHRSKRKVLGRKDSEDDHTRNHSPSPPVTPTGAAPSLASPKQVGSIQRSLKKSSTS SDNFKALLLKKGSRSDTSARMSAAEMLKSTDPRFQRSRSEPSPEVPDSPSSFSPNKNRRAPEEW AKNEGLMPRSLSFSGPRYSRSRTPPSAASSRYSMRNRIQSSPMTVISEGEGEPAEPADNKVRRT LDTTRGCSLDRLAGQETDRGSPLCSEEPASVDGIGRAKDDGPSEQCRGPEQKS hide sequence

RefSeq Acc Id:	XP_006227730 ⟸ XM_006227668
- Peptide Label:	isoform X2
- UniProtKB:	A0A0G2JZL4 (UniProtKB/TrEMBL), A6JPA2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKKEGSAGSFRIKANPGSLSRAVSWINFSSLSRQTKRLFRSDGELSVCGQQVEADDENWIYRTQ PRKAVSNLDEESRWTVHYTAPWHQQENVFLPSTRPPCVEDLHRQAKLNLKSVLRECDKLRRDGC RSSQYYSQGPTFAASSSPGDDYQEEDAETDRKYSLSSSEEERFIGIRRPKTPTSGDFSDLHTQT NWTKSLPLPTPEEKTRQQAQTVQADVVPINITGENFDRQASLRRSLIYTDTLVRRPKKVKRRKT ISGIPDIIQKELASATGQEDDGSTHSLYSPDHYSTLGRLDSYRSTGQCLETRDSGCQTEEVKVI PPSVRRIRAHKGLGIAAQMSHLSGSSGNMSVLSDSAGIVFPSRLNNDTGFHSLPRAGARASTYS LEARMGALGSAEDTDDTFPYRGGSSQGPENFAHLGGASSTGMLSRPKSQQLRLLESPACVVSPH AAYSTSVIPNATLLSSSEVIVIHTAQSAGQLDSRVPGSSSYSKIKPRDHPTPRCSARDERQSPR HHWNEGHIIHSQALASAAPGATALLSLRDSEVSLNAPAINRENGSQAILYHCRSNLAFPAHPPD VDGKSECSSSGDRGCGSSESWEYKASSNGRASPLKPHLATPGCSTPTSNMSSCSLDQASLKEDA RSLYSEDHDGYYMTAQGDSRHEAGSAYGISDGFGNPRHSTVNVFDGRAQRSQGDQATQQDRILS RNISLKKAKKPPPPPSRTDSLRRIPKKNNQTNGQVLNESLIASLQHSLQLSLPGQGSGSPSQSP CSDCEEPWLPRSRSQSIVSEGSSLTSTTTPNVYSLCGLTPSQSDTSSVKSEYADPWGYYIDYTT LQGDPGNPTGGCPASSEAATGNGPVRHIQEGSRAPVPQVPGCSVKPKITSPEKSQRVTSPSSGY SSQSNTPTALTPVPVFLKSMSPANGKGKAKPKVPERKSSLISSVSISSSSTSLSSNTSTEGSGT VKKLDSALASALAPPPPPLPALPSPSLANKSPFLPPPPPLADCSEGSPLPPSPVFPPPPPEALV PFCSPTDRCLSPSPTAFSPPLPRCSPPLPAPPPFLPPSEPPPAPPLDPKFMKENRPFIKNSSQS ESSREALRRPANKEEGCRPSMPLITTEALQMVQLRPVRKNSGAETVLFSEPSAQEPRTPTAPQY HLKPSAFLKSRNSINEMESESQAASVTSSLPMPAKSQSQGDHDSAVERGGLQSCSDGAPGPGPS LRTALLPDSSPSRKPPPISKKPKLFLVVPPPQRDFTAEPTENGSEAFSGVPSPTGAEGEAGQSQ EEKSSPASQAGSHATAPTSGSTVLERGTAGSLSPGVVEANAPMVQPSTSPGPAQEEAGENRVDG ERNVKSCASPRGGEAGLPEPNTAGPSSDTADVSKEGGNDEVLTPTRPRTTEDLFAAIHRSKRKV LGRKDSEDDHTRNHSPSPPVTPTGAAPSLASPKQVGSIQRSLKKSSTSSDNFKALLLKKGSRSD TSARMSAAEMLKSTDPRFQRSRSEPSPEVPDSPSSFSPNKNRRAPEEWAKNEGLMPRSLSFSGP RYSRSRTPPSAASSRYSMRNRIQSSPMTVISEGEGEPAEPADNKVRRTLDTTRGCSLDRLAGQE TDRGSPLCSEEPASVDGIGRAKDDGPSEQCRGPEQKS hide sequence

RefSeq Acc Id:	XP_017445312 ⟸ XM_017589823
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6ASC1 (UniProtKB/TrEMBL), A6JPA2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPFHQRSVEPARLRRPEEAAGALAGDPPLFRSLEQVSSHTLVCLLAQLADLSRCAGDIFGELEG QAAALGHRTAELHRRLDALHAAAARLDHRRVKIPVSNLDEESRWTVHYTAPWHQQENVFLPSTR PPCVEDLHRQAKLNLKSVLRECDKLRRDGCRSSQYYSQGPTFAASSSPGDDYQEEDAETDRKYS LSSSEEERFIGIRRPKTPTSGDFSDLHTQTNWTKSLPLPTPEEKTRQQAQTVQADVVPINITGE NFDRQASLRRSLIYTDTLVRRPKKVKRRKTISGIPDIIQKELASATGQEDDGSTHSLYSPDHYS TLGRLDSYRSTGQCLETRDSGCQTEEVKVIPPSVRRIRAHKGLGIAAQMSHLSGSSGNMSVLSD SAGIVFPSRLNNDTGFHSLPRAGARASTYSLEARMGALGSAEDTDDTFPYRGGSSQGPENFAHL GGASSTGMLSRPKSQQLRLLESPACVVSPHAAYSTSVIPNATLLSSSEVIVIHTAQSAGQLDSR VPGSSSYSKIKPRDHPTPRCSARDERQSPRHHWNEGHIIHSQALASAAPGATALLSLRDSEVSL NAPAINRENGSQAILYHCRSNLAFPAHPPDVDGKSECSSSGDRGCGSSESWEYKASSNGRASPL KPHLATPGCSTPTSNMSSCSLDQASLKEDARSLYSEDHDGYYMTAQGDSRHEAGSAYGISDGFG NPRHSTVNVFDGRAQRSQGDQATQQDRILSRNISLKKAKKPPPPPSRTDSLRRIPKKNNQTNGQ VLNESLIASLQHSLQLSLPGQGSGSPSQSPCSDCEEPWLPRSRSQSIVSEGSSLTSTTTPNVYS LCGLTPSQSDTSSVKSEYADPWGYYIDYTTLQGDPGNPTGGCPASSEAATGNGPVRHIQEGSRA PVPQVPGCSVKPKITSPEKSQRVTSPSSGYSSQSNTPTALTPVPVFLKSMSPANGKGKAKPKVP ERKSSLISSVSISSSSTSLSSNTSTEGSGTVKKLDSALASALAPPPPPLPALPSPSLANKSPFL PPPPPLADCSEGSPLPPSPVFPPPPPEALVPFCSPTDRCLSPSPTAFSPPLPRCSPPLPAPPPF LPPSEPPPAPPLDPKFMKENRPFIKNSSQSESSREALRRPANKEEGCRPSMPLITTEALQMVQL RPVRKNSGAETVLFSEPSAQEPRTPTAPQYHLKPSAFLKSRNSINEMESESQAASVTSSLPMPA KSQSQGDHDSAVERGGLQSCSDGAPGPGPSLRTALLPDSSPSRKPPPISKKPKLFLVVPPPQRD FTAEPTENGSEAFSGVPSPTGAEGEAGQSQEEKSSPASQAGSHATAPTSGSTVLERGTAGSLSP GVVEANAPMVQPSTSPGPAQEEAGENRVDGERNVKSCASPRGGEAGLPEPNTAGPSSDTADVSK EGGNDEVLTPTRPRTTEDLFAAIHRSKRKVLGRKDSEDDHTRNHSPSPPVTPTGAAPSLASPKQ VGSIQRSLKKSSTSSDNFKALLLKKGSRSDTSARMSAAEMLKSTDPRFQRSRSEPSPEVPDSPS SFSPNKNRRAPEEWAKNEGLMPRSLSFSGPRYSRSRTPPSAASSRYSMRNRIQSSPMTVISEGE GEPAEPADNKVRRTLDTTRGCSLDRLAGQETDRGSPLCSEEPASVDGIGRAKDDGPSEQCRGPE QKS hide sequence

RefSeq Acc Id:	XP_017445313 ⟸ XM_017589824
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I5Y5X6 (UniProtKB/TrEMBL), A6JPA2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPFHQRSVEPARLRRPEEAAGALAGDPPLFRSLEQVSSHTLVCLLAQLADLSRCAGDIFGELEG QAAALGHRTAELHRRLDALHAAAARLDHRRVKIPVSNLDEESRWTVHYTAPWHQQENVFLPSTR PPCVEDLHRQAKLNLKSVLRECDKLRRDGCRSSQYYSQGPTFAASSSPGDDYQEEDAETDRKYS LSSSEEERFIGIRRPKTPTSGDFSDLHTQTNWTKSLPLPTPEEKTRQQAQTVQADVVPINITAS ATGQEDDGSTHSLYSPDHYSTLGRLDSYRSTGQCLETRDSGCQTEEVKVIPPSVRRIRAHKGLG IAAQMSHLSGSSGNMSVLSDSAGIVFPSRLNNDTGFHSLPRAGARASTYSLEARMGALGSAEDT DDTFPYRGGSSQGPENFAHLGGASSTGMLSRPKSQQLRLLESPACVVSPHAAYSTSVIPNATLL SSSEVIVIHTAQSAGQLDSRVPGSSSYSKIKPRDHPTPRCSARDERQSPRHHWNEGHIIHSQAL ASAAPGATALLSLRDSEVSLNAPAINRENGSQAILYHCRSNLAFPAHPPDVDGKSECSSSGDRG CGSSESWEYKASSNGRASPLKPHLATPGCSTPTSNMSSCSLDQASLKEDARSLYSEDHDGYYMT AQGDSRHEAGSAYGISDGFGNPRHSTVNVFDGRAQRSQGDQATQQDRILSRNISLKKAKKPPPP PSRTDSLRRIPKKNNQTNGQVLNESLIASLQHSLQLSLPGQGSGSPSQSPCSDCEEPWLPRSRS QSIVSEGSSLTSTTTPNVYSLCGLTPSQSDTSSVKSEYADPWGYYIDYTTLQGDPGNPTGGCPA SSEAATGNGPVRHIQEGSRAPVPQVPGCSVKPKITSPEKSQRVTSPSSGYSSQSNTPTALTPVP VFLKSMSPANGKGKAKPKVPERKSSLISSVSISSSSTSLSSNTSTEGSGTVKKLDSALASALAP PPPPLPALPSPSLANKSPFLPPPPPLADCSEGSPLPPSPVFPPPPPEALVPFCSPTDRCLSPSP TAFSPPLPRCSPPLPAPPPFLPPSEPPPAPPLDPKFMKENRPFIKNSSQSESSREALRRPANKE EGCRPSMPLITTEALQMVQLRPVRKNSGAETVLFSEPSAQEPRTPTAPQYHLKPSAFLKSRNSI NEMESESQAASVTSSLPMPAKSQSQGDHDSAVERGGLQSCSDGAPGPGPSLRTALLPDSSPSRK PPPISKKPKLFLVVPPPQRDFTAEPTENGSEAFSGVPSPTGAEGEAGQSQEEKSSPASQAGSHA TAPTSGSTVLERGTAGSLSPGVVEANAPMVQPSTSPGPAQEEAGENRVDGERNVKSCASPRGGE AGLPEPNTAGPSSDTADVSKEGGNDEVLTPTRPRTTEDLFAAIHRSKRKVLGRKDSEDDHTRNH SPSPPVTPTGAAPSLASPKQVGSIQRSLKKSSTSSDNFKALLLKKGSRSDTSARMSAAEMLKST DPRFQRSRSEPSPEVPDSPSSFSPNKNRRAPEEWAKNEGLMPRSLSFSGPRYSRSRTPPSAASS RYSMRNRIQSSPMTVISEGEGEPAEPADNKVRRTLDTTRGCSLDRLAGQETDRGSPLCSEEPAS VDGIGRAKDDGPSEQCRGPEQKS hide sequence

Ensembl Acc Id:

ENSRNOP00000071093 ⟸ ENSRNOT00000079250

RefSeq Acc Id:	XP_038954717 ⟸ XM_039098789
- Peptide Label:	isoform X8

Ensembl Acc Id:

ENSRNOP00000097262 ⟸ ENSRNOT00000098675

Ensembl Acc Id:

ENSRNOP00000077518 ⟸ ENSRNOT00000102189

Ensembl Acc Id:

ENSRNOP00000094113 ⟸ ENSRNOT00000115660

RefSeq Acc Id:	XP_063118378 ⟸ XM_063262308
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_063118376 ⟸ XM_063262306
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_063118375 ⟸ XM_063262305
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_063118368 ⟸ XM_063262298
- Peptide Label:	isoform X7
- UniProtKB:	A6JPA2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	NP_001414775 ⟸ NM_001427846
- UniProtKB:	A6JPA2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118360 ⟸ XM_063262290
- Peptide Label:	isoform X6
- UniProtKB:	A6JPA2 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000103902 ⟸ ENSRNOT00000121131

Ensembl Acc Id:

ENSRNOP00000102281 ⟸ ENSRNOT00000160257

Ensembl Acc Id:

ENSRNOP00000110420 ⟸ ENSRNOT00000130671

Ensembl Acc Id:

ENSRNOP00000102979 ⟸ ENSRNOT00000156619

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0A0G2JZL4-F1-model_v2	AlphaFold	A0A0G2JZL4	1-1575	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13689514

Promoter ID:

EPDNEW_R31

Type:

initiation region

Name:

Nhsl1_1

Description:

NHS-like 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	1	13,595,420 - 13,595,480	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1308124	AgrOrtholog
BioCyc Gene	G2FUF-62265	BioCyc
Ensembl Genes	ENSRNOG00000060603	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000079250	ENTREZGENE
	ENSRNOT00000079250.3	UniProtKB/TrEMBL
	ENSRNOT00000098675	ENTREZGENE
	ENSRNOT00000098675.2	UniProtKB/TrEMBL
	ENSRNOT00000102189	ENTREZGENE
	ENSRNOT00000102189.2	UniProtKB/TrEMBL
	ENSRNOT00000115660	ENTREZGENE
	ENSRNOT00000115660.2	UniProtKB/TrEMBL
	ENSRNOT00000121131.1	UniProtKB/TrEMBL
	ENSRNOT00000130671.1	UniProtKB/TrEMBL
	ENSRNOT00000156619	ENTREZGENE
	ENSRNOT00000156619.1	UniProtKB/TrEMBL
	ENSRNOT00000160257	ENTREZGENE
	ENSRNOT00000160257.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.5.340	UniProtKB/TrEMBL
InterPro	NHS_fam	UniProtKB/TrEMBL
KEGG Report	rno:308631	UniProtKB/TrEMBL
NCBI Gene	308631	ENTREZGENE
PANTHER	NANCE-HORAN SYNDROME PROTEIN	UniProtKB/TrEMBL
	NHS-LIKE PROTEIN 1	UniProtKB/TrEMBL
Pfam	NHS	UniProtKB/TrEMBL
PhenoGen	Nhsl1	PhenoGen
RatGTEx	ENSRNOG00000060603	RatGTEx
UniProt	A0A0G2JZL4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5Y5X6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6ASC1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6GKL0	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0LFT6_RAT	UniProtKB/TrEMBL
	A0ABK0LHR9_RAT	UniProtKB/TrEMBL
	A0ABK0LNF6_RAT	UniProtKB/TrEMBL
	A0ABK0M2D6_RAT	UniProtKB/TrEMBL
	A6JPA2	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2012-10-10	Nhsl1	NHS-like 1	RGD1308124	similar to KIAA1357 protein	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	RGD1308124	similar to KIAA1357 protein	RGD1308124_predicted	similar to KIAA1357 protein (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-20	RGD1308124_predicted	similar to KIAA1357 protein (predicted)	LOC308631_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC308631_predicted	similar to KIAA1357 protein (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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