Ube2v1 (ubiquitin conjugating enzyme E2 V1) - Rat Genome Database

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Gene: Ube2v1 (ubiquitin conjugating enzyme E2 V1) Rattus norvegicus
Analyze
Symbol: Ube2v1
Name: ubiquitin conjugating enzyme E2 V1
RGD ID: 1305503
Description: Predicted to enable ubiquitin conjugating enzyme binding activity. Predicted to contribute to ubiquitin conjugating enzyme activity. Involved in regulation protein catabolic process at postsynapse. Is active in glutamatergic synapse and postsynaptic density. Orthologous to human UBE2V1 (ubiquitin conjugating enzyme E2 V1); PARTICIPATES IN interleukin-1 signaling pathway; Toll-like receptor signaling pathway; INTERACTS WITH bisphenol A; decabromodiphenyl ether; flutamide.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC296390; ubiquitin-conjugating enzyme E2 variant 1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Ube2v1-ps1   Ube2v1-ps13  
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83176,736,325 - 176,759,174 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl3176,736,325 - 176,788,278 (-)EnsemblGRCr8
mRatBN7.23156,317,339 - 156,340,198 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3156,316,781 - 156,340,273 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx3160,112,541 - 160,135,263 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03168,611,607 - 168,634,329 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03166,353,312 - 166,376,034 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.03164,343,833 - 164,366,684 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3164,343,833 - 164,366,684 (-)Ensemblrn6Rnor6.0
Rnor_5.03170,494,658 - 170,517,510 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.43158,745,873 - 158,768,725 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera3154,895,611 - 154,918,417 (-)NCBICelera
RGSC_v3.1230,801,331 - 30,802,674 (-)NCBI
Cytogenetic Map3q42NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Pathogen recognition by the innate immune system. Kumar H, etal., Int Rev Immunol. 2011 Feb;30(1):16-34.
3. Proteasome-independent polyubiquitin linkage regulates synapse scaffolding, efficacy, and plasticity. Ma Q, etal., Proc Natl Acad Sci U S A. 2017 Oct 10;114(41):E8760-E8769. doi: 10.1073/pnas.1620153114. Epub 2017 Sep 25.
4. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
5. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
6. GOA pipeline RGD automated data pipeline
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
8. Comprehensive gene review and curation RGD comprehensive gene curation
9. TLR-4, IL-1R and TNF-R signaling to NF-kappaB: variations on a common theme. Verstrepen L, etal., Cell Mol Life Sci. 2008 Oct;65(19):2964-78.
10. Interleukin-1 (IL-1) pathway. Weber A, etal., Sci Signal. 2010 Jan 19;3(105):cm1. doi: 10.1126/scisignal.3105cm1.
Additional References at PubMed
PMID:8889548   PMID:11406273   PMID:14406273   PMID:15632090   PMID:16129784   PMID:16307917   PMID:20458337   PMID:21512573   PMID:22797923   PMID:23376485   PMID:23533145   PMID:23776175  
PMID:31006531  


Genomics

Comparative Map Data
Ube2v1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83176,736,325 - 176,759,174 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl3176,736,325 - 176,788,278 (-)EnsemblGRCr8
mRatBN7.23156,317,339 - 156,340,198 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3156,316,781 - 156,340,273 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx3160,112,541 - 160,135,263 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03168,611,607 - 168,634,329 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03166,353,312 - 166,376,034 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.03164,343,833 - 164,366,684 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3164,343,833 - 164,366,684 (-)Ensemblrn6Rnor6.0
Rnor_5.03170,494,658 - 170,517,510 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.43158,745,873 - 158,768,725 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera3154,895,611 - 154,918,417 (-)NCBICelera
RGSC_v3.1230,801,331 - 30,802,674 (-)NCBI
Cytogenetic Map3q42NCBI
UBE2V1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382050,081,124 - 50,115,957 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2050,081,122 - 50,115,959 (-)Ensemblhg38GRCh38
GRCh372048,697,661 - 48,732,494 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362048,131,068 - 48,165,901 (-)NCBIBuild 36Build 36hg18NCBI36
Build 342048,131,069 - 48,165,901NCBI
Celera2045,402,229 - 45,437,046 (-)NCBICelera
Cytogenetic Map20q13.13NCBI
HuRef2045,446,214 - 45,481,084 (-)NCBIHuRef
CHM1_12048,602,318 - 48,637,156 (-)NCBICHM1_1
T2T-CHM13v2.02051,850,763 - 51,885,744 (-)NCBIT2T-CHM13v2.0
Ube2v1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392167,449,559 - 167,473,933 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2167,449,558 - 167,474,015 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm382167,607,639 - 167,632,020 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2167,607,638 - 167,632,095 (-)Ensemblmm10GRCm38
MGSCv372167,433,139 - 167,457,505 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv362167,299,051 - 167,323,197 (-)NCBIMGSCv36mm8
Celera2173,547,882 - 173,572,247 (-)NCBICelera
Cytogenetic Map2H3NCBI
cM Map287.44NCBI
Ube2v1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554458,142,882 - 8,174,261 (+)Ensembl
ChiLan1.0NW_0049554458,142,882 - 8,174,199 (+)NCBIChiLan1.0ChiLan1.0
UBE2V1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22155,826,115 - 55,861,215 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12055,819,223 - 55,854,323 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02046,422,383 - 46,457,295 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12047,539,899 - 47,574,711 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2047,539,899 - 47,574,328 (-)EnsemblpanPan2panpan1.1
UBE2V1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12436,570,172 - 36,601,200 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2436,570,172 - 36,603,212 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2435,813,887 - 35,844,891 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02437,276,348 - 37,307,407 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2437,276,345 - 37,309,420 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12436,517,713 - 36,548,721 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02436,650,973 - 36,681,947 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02437,194,591 - 37,225,638 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
LOC101977921
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640188,922,529 - 188,951,741 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365144,382,399 - 4,405,379 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365144,382,428 - 4,405,151 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
UBE2V1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1751,629,964 - 51,666,701 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11751,630,233 - 51,664,498 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21757,860,294 - 57,894,557 (+)NCBISscrofa10.2Sscrofa10.2susScr3
UBE2V1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1213,854,815 - 13,890,057 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605062,284,577 - 62,322,312 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ube2v1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247905,427,445 - 5,457,166 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247905,427,444 - 5,457,166 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Ube2v1
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v15150,375,315 - 150,398,789 (+)NCBIRrattus_CSIRO_v1

miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:204
Count of miRNA genes:132
Interacting mature miRNAs:153
Transcripts:ENSRNOT00000035048
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
12879876Bw182Body weight QTL 1820.003body mass (VT:0001259)body weight (CMO:0000012)3141555229186555229Rat
2301411Bp320Blood pressure QTL 3200.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)3141555229186555229Rat
1582233Insul10Insulin level QTL 105.40.0015blood insulin amount (VT:0001560)serum insulin level times blood glucose level (CMO:0002040)3133259579178259579Rat
1300113Bp176Blood pressure QTL 1763.9arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)3166376089177728348Rat
12879872Cm97Cardiac mass QTL 970.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)3141555229186555229Rat
12879873Cm96Cardiac mass QTL 960.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)3141555229186555229Rat
1578653Vnigr3Vascular neointimal growth QTL 33.1artery morphology trait (VT:0002191)artery neointimal hyperplastic lesion area (CMO:0001414)3151075912189428310Rat
2302373Gluco39Glucose level QTL 395.01blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)3129154923182114333Rat
12879874Cm98Cardiac mass QTL 980.005heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)3141555229186555229Rat
12879875Kidm64Kidney mass QTL 640.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)3141555229186555229Rat
1298068Bp167Blood pressure QTL 1670.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3161492708189428310Rat
70216Cm14Cardiac mass QTL 142.1heart mass (VT:0007028)heart wet weight (CMO:0000069)351581665184004958Rat
8552791Vie2Viral induced encephalitis QTL 24.1brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)3166376089189428310Rat
1578754Stresp16Stress response QTL 1640.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)3133134628178134628Rat
1331726Bp208Blood pressure QTL 2083.129arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)3161799270187311134Rat
1582213Insul6Insulin level QTL 63.70.0009blood insulin amount (VT:0001560)calculated serum insulin level (CMO:0000359)3155759447189428310Rat
1598854Memor10Memory QTL 102exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)3166376089189428310Rat
9589106Insul23Insulin level QTL 2313.860.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)3152055202189428310Rat
10755461Coatc16Coat color QTL 16coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)3142898802187898802Rat
8662816Vetf4Vascular elastic tissue fragility QTL 44renal artery integrity trait (VT:0010642)number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)379649560177741895Rat
1559282Emca5Estrogen-induced mammary cancer QTL 53.9mammary gland integrity trait (VT:0010552)percentage of study population developing mammary tumors during a period of time (CMO:0000948)3145335553189428310Rat
1582256Insul9Insulin level QTL 94.40.0016blood insulin amount (VT:0001560)absolute change in serum insulin level (CMO:0002038)3155759447189428310Rat
1576306Schws3Schwannoma susceptibility QTL 30.001nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)3139299381184299381Rat
1300159Kidm4Kidney mass QTL 43.83kidney mass (VT:0002707)right kidney wet weight to body weight ratio (CMO:0001953)3141508991177728348Rat
631673Iddm13Insulin dependent diabetes mellitus QTL 131.30.663blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)3137114333182114333Rat
1582248Insul7Insulin level QTL 73.90.0041blood insulin amount (VT:0001560)calculated serum insulin level (CMO:0000359)3155759447189428310Rat
1578666Vnigr1Vascular neointimal growth QTL 14.6artery morphology trait (VT:0002191)artery lumen area (CMO:0001409)3151075912189428310Rat
1578656Vnigr2Vascular neointimal growth QTL 24.2artery morphology trait (VT:0002191)lesioned artery residual lumen area (CMO:0001417)3151075912189428310Rat
12879871Am7Aortic mass QTL 70.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)3141555229186555229Rat
631541Bp81Blood pressure QTL 814arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3144575244189428310Rat

Markers in Region
RH133903  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.23156,349,563 - 156,349,770 (+)MAPPERmRatBN7.2
Rnor_6.03164,376,050 - 164,376,256NCBIRnor6.0
Rnor_5.03170,526,876 - 170,527,082UniSTSRnor5.0
RGSC_v3.43158,778,091 - 158,778,297UniSTSRGSC3.4
Celera3154,927,783 - 154,927,989UniSTS
RH 3.4 Map1889.72UniSTS
Cytogenetic Map3q42UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
10 11 61 134 57 60 41 86 41 297 167 9 125 71 73 19 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000035048   ⟹   ENSRNOP00000036667
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3176,736,325 - 176,759,174 (-)Ensembl
mRatBN7.2 Ensembl3156,317,335 - 156,340,215 (-)Ensembl
Rnor_6.0 Ensembl3164,343,833 - 164,366,684 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000076935   ⟹   ENSRNOP00000097930
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3176,737,589 - 176,759,174 (-)Ensembl
mRatBN7.2 Ensembl3156,318,603 - 156,340,273 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000105245   ⟹   ENSRNOP00000078768
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3176,736,325 - 176,745,985 (-)Ensembl
mRatBN7.2 Ensembl3156,316,781 - 156,339,741 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000105857   ⟹   ENSRNOP00000096303
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl3156,316,781 - 156,327,002 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000115344   ⟹   ENSRNOP00000079322
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl3156,316,781 - 156,326,945 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000164477   ⟹   ENSRNOP00000106251
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3176,736,325 - 176,788,278 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000174020   ⟹   ENSRNOP00000110577
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3176,736,325 - 176,788,278 (-)Ensembl
RefSeq Acc Id: NM_001110345   ⟹   NP_001103815
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83176,736,325 - 176,759,174 (-)NCBI
mRatBN7.23156,317,339 - 156,340,198 (-)NCBI
Rnor_6.03164,343,833 - 164,366,684 (-)NCBI
Rnor_5.03170,494,658 - 170,517,510 (-)NCBI
RGSC_v3.43158,745,873 - 158,768,725 (-)RGD
Celera3154,895,611 - 154,918,417 (-)RGD
Sequence:
RefSeq Acc Id: NP_001103815   ⟸   NM_001110345
- UniProtKB: D3ZFY8 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000036667   ⟸   ENSRNOT00000035048
Ensembl Acc Id: ENSRNOP00000096303   ⟸   ENSRNOT00000105857
Ensembl Acc Id: ENSRNOP00000078768   ⟸   ENSRNOT00000105245
Ensembl Acc Id: ENSRNOP00000097930   ⟸   ENSRNOT00000076935
Ensembl Acc Id: ENSRNOP00000079322   ⟸   ENSRNOT00000115344
Ensembl Acc Id: ENSRNOP00000106251   ⟸   ENSRNOT00000164477
Ensembl Acc Id: ENSRNOP00000110577   ⟸   ENSRNOT00000174020

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZFY8-F1-model_v2 AlphaFold D3ZFY8 1-147 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13692693
Promoter ID:EPDNEW_R3218
Type:multiple initiation site
Name:Ube2v1_1
Description:ubiquitin conjugating enzyme E2 V1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.03164,366,664 - 164,366,724EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1305503 AgrOrtholog
BioCyc Gene G2FUF-46722 BioCyc
Ensembl Genes ENSRNOG00000025580 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSRNOG00000067007 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000035048 ENTREZGENE
  ENSRNOT00000035048.7 UniProtKB/TrEMBL
  ENSRNOT00000057117.4 UniProtKB/TrEMBL
  ENSRNOT00000076935.3 UniProtKB/TrEMBL
  ENSRNOT00000105245.3 UniProtKB/TrEMBL
  ENSRNOT00000164477.1 UniProtKB/TrEMBL
  ENSRNOT00000174020.1 UniProtKB/TrEMBL
Gene3D-CATH 3.10.110.10 UniProtKB/TrEMBL
InterPro UBQ-conjugat_E2 UniProtKB/TrEMBL
  UBQ-conjugating_enzyme/RWD UniProtKB/TrEMBL
NCBI Gene 296390 ENTREZGENE
PANTHER UBIQUITIN-CONJUGATING ENZYME E2 UniProtKB/TrEMBL
Pfam UQ_con UniProtKB/TrEMBL
PhenoGen Ube2v1 PhenoGen
PROSITE UBIQUITIN_CONJUGAT_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000025580 RatGTEx
  ENSRNOG00000067007 RatGTEx
SMART UBCc UniProtKB/TrEMBL
Superfamily-SCOP SSF54495 UniProtKB/TrEMBL
UniProt A0A8I5ZLF5_RAT UniProtKB/TrEMBL
  A0A8I6ATW2_RAT UniProtKB/TrEMBL
  A0ABK0LV99_RAT UniProtKB/TrEMBL
  A0ABK0LZ33_RAT UniProtKB/TrEMBL
  D3ZFY8 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary A0A8I6A3Q1 UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-03-22 Ube2v1  ubiquitin conjugating enzyme E2 V1  Ube2v1  ubiquitin-conjugating enzyme E2 variant 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Ube2v1  ubiquitin-conjugating enzyme E2 variant 1   Ube2v1_predicted  ubiquitin-conjugating enzyme E2 variant 1 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Ube2v1_predicted  ubiquitin-conjugating enzyme E2 variant 1 (predicted)      Symbol and Name status set to approved 70820 APPROVED