Daam1 (dishevelled associated activator of morphogenesis 1) - Rat Genome Database

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Gene: Daam1 (dishevelled associated activator of morphogenesis 1) Rattus norvegicus
Analyze
Symbol: Daam1
Name: dishevelled associated activator of morphogenesis 1
RGD ID: 1305119
Description: Predicted to enable identical protein binding activity. Predicted to be involved in actin cytoskeleton organization. Predicted to be located in several cellular components, including ciliary basal body; motile cilium; and perinuclear region of cytoplasm. Predicted to be active in stress fiber. Orthologous to human DAAM1 (dishevelled associated activator of morphogenesis 1); PARTICIPATES IN Wnt signaling, non-canonical pathway; Wnt signaling, the planar cell polarity pathway; Wnt signaling pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: disheveled-associated activator of morphogenesis 1; LOC314212
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8696,125,521 - 96,286,049 (+)NCBIGRCr8
mRatBN7.2690,389,544 - 90,550,114 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl690,389,688 - 90,550,114 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx690,816,596 - 90,919,779 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0691,116,053 - 91,219,233 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0690,555,621 - 90,658,792 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0694,606,675 - 94,739,026 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl694,636,222 - 94,739,026 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06104,055,469 - 104,183,583 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4694,081,666 - 94,184,202 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1694,081,654 - 94,185,174 (+)NCBI
Celera688,912,980 - 89,016,587 (+)NCBICelera
Cytogenetic Map6q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-demecolcine  (ISO)
(-)-epigallocatechin 3-gallate  (ISO)
(1->4)-beta-D-glucan  (ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (EXP)
2,6-dinitrotoluene  (EXP)
2-hydroxypropanoic acid  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
all-trans-retinoic acid  (ISO)
antimycin A  (ISO)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
azoxystrobin  (ISO)
benzo[a]pyrene  (ISO)
bisphenol A  (EXP,ISO)
buspirone  (EXP)
cadmium dichloride  (ISO)
caffeine  (ISO)
carbon nanotube  (ISO)
chlordecone  (ISO)
chromium(6+)  (ISO)
cisplatin  (ISO)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
crocidolite asbestos  (ISO)
cyclosporin A  (ISO)
deguelin  (ISO)
dibutyl phthalate  (EXP)
elemental selenium  (ISO)
endosulfan  (EXP)
ethanol  (ISO)
fenpyroximate  (ISO)
flutamide  (EXP)
FR900359  (ISO)
fulvestrant  (ISO)
gentamycin  (EXP)
glyphosate  (ISO)
lead(0)  (ISO)
methapyrilene  (EXP)
methylmercury chloride  (ISO)
nefazodone  (EXP)
nimesulide  (EXP)
oxaliplatin  (EXP)
paracetamol  (EXP,ISO)
perfluorooctane-1-sulfonic acid  (ISO)
phenobarbital  (ISO)
picoxystrobin  (ISO)
pirinixic acid  (ISO)
potassium chromate  (ISO)
pregnenolone 16alpha-carbonitrile  (ISO)
propiconazole  (ISO)
pyrimidifen  (ISO)
rac-lactic acid  (ISO)
rotenone  (ISO)
selenium atom  (ISO)
sodium arsenate  (ISO)
succimer  (ISO)
sunitinib  (ISO)
tamibarotene  (ISO)
tebufenpyrad  (ISO)
tetrachloromethane  (EXP)
thifluzamide  (ISO)
topotecan  (EXP)
trichostatin A  (ISO)
troglitazone  (ISO)
urethane  (ISO)
valdecoxib  (EXP)
valproic acid  (ISO)
vincristine  (ISO)
vitamin E  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Planar cell polarity signaling in vertebrates. Jones C and Chen P, Bioessays. 2007 Feb;29(2):120-32.
3. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
4. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:16630611   PMID:18162551   PMID:18218625   PMID:19946888   PMID:20534871   PMID:25897839   PMID:26514267   PMID:26644512   PMID:26831620   PMID:28332181   PMID:32353957  


Genomics

Comparative Map Data
Daam1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8696,125,521 - 96,286,049 (+)NCBIGRCr8
mRatBN7.2690,389,544 - 90,550,114 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl690,389,688 - 90,550,114 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx690,816,596 - 90,919,779 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0691,116,053 - 91,219,233 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0690,555,621 - 90,658,792 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0694,606,675 - 94,739,026 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl694,636,222 - 94,739,026 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06104,055,469 - 104,183,583 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4694,081,666 - 94,184,202 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1694,081,654 - 94,185,174 (+)NCBI
Celera688,912,980 - 89,016,587 (+)NCBICelera
Cytogenetic Map6q24NCBI
DAAM1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381459,188,667 - 59,371,405 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1459,188,646 - 59,371,405 (+)EnsemblGRCh38hg38GRCh38
GRCh371459,655,385 - 59,838,123 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361458,725,152 - 58,906,224 (+)NCBINCBI36Build 36hg18NCBI36
Build 341458,725,151 - 58,906,224NCBI
Celera1439,705,036 - 39,886,100 (+)NCBICelera
Cytogenetic Map14q23.1NCBI
HuRef1439,819,615 - 40,001,983 (+)NCBIHuRef
CHM1_11459,593,312 - 59,776,243 (+)NCBICHM1_1
T2T-CHM13v2.01453,395,543 - 53,578,348 (+)NCBIT2T-CHM13v2.0
Daam1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391271,877,834 - 72,039,150 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1271,877,852 - 72,039,107 (+)EnsemblGRCm39 Ensembl
GRCm381271,830,950 - 71,992,376 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1271,831,078 - 71,992,333 (+)EnsemblGRCm38mm10GRCm38
MGSCv371272,932,065 - 73,093,354 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361272,749,655 - 72,910,944 (+)NCBIMGSCv36mm8
Celera1272,944,641 - 73,102,220 (+)NCBICelera
Cytogenetic Map12C3NCBI
cM Map1230.06NCBI
Daam1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546612,954,242 - 13,127,076 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495546612,954,557 - 13,129,483 (+)NCBIChiLan1.0ChiLan1.0
DAAM1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21560,322,767 - 60,505,772 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11459,539,281 - 59,722,288 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01439,792,952 - 39,975,754 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11458,059,616 - 58,241,353 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1458,133,462 - 58,241,353 (+)Ensemblpanpan1.1panPan2
DAAM1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1834,475,045 - 34,641,843 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl834,476,646 - 34,640,231 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha834,235,875 - 34,402,396 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0834,710,887 - 34,877,521 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl834,710,937 - 34,875,420 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1834,328,018 - 34,494,795 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0834,397,374 - 34,563,910 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0834,764,445 - 34,931,060 (+)NCBIUU_Cfam_GSD_1.0
Daam1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864070,431,852 - 70,599,910 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364953,661,284 - 3,759,905 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364953,591,611 - 3,757,646 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DAAM1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1188,335,384 - 188,511,096 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11188,335,335 - 188,511,094 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21209,404,401 - 209,532,217 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DAAM1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12436,406,841 - 36,588,993 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2436,406,847 - 36,589,045 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605324,661,222 - 24,842,408 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Daam1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473441,708,570 - 41,866,887 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473441,709,226 - 41,880,149 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Daam1
709 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:324
Count of miRNA genes:214
Interacting mature miRNAs:251
Transcripts:ENSRNOT00000005846
Prediction methods:Microtar, Miranda
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
737827Hcar11Hepatocarcinoma resistance QTL 114.4liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)682523650110548006Rat
4145119Mcs25Mammary carcinoma susceptibility QTL 250.0001mammary gland integrity trait (VT:0010552)ratio of deaths to total study population during a period of time (CMO:0001023)610894415110548006Rat
6893332Cm74Cardiac mass QTL 740.40.64heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)657730540104085867Rat
731173Uae22Urinary albumin excretion QTL 2210.1urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)665531555140994061Rat
738034Anxrr5Anxiety related response QTL 55.9exploratory behavior trait (VT:0010471)percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)684130881129130881Rat
634330Pia16Pristane induced arthritis QTL 163.9joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)645790088104200226Rat
1300075Glom7Glomerulus QTL 75.60.0000002kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)671201409116201409Rat
1300076Glom8Glomerulus QTL 870.000000009kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli directly contacting the kidney surface (CMO:0001001)686894788131894788Rat
10054138Gmadr3Adrenal mass QTL 33.680.00045adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)685140138130140138Rat
10054123Srcrt6Stress Responsive Cort QTL 62.50.0043blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)685140138130140138Rat
1331789Rf37Renal function QTL 373.224kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)672202632115200186Rat
1331799Bp211Blood pressure QTL 2113.66407arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)672202632130919985Rat
1558641Cm47Cardiac mass QTL 472.90.001heart mass (VT:0007028)heart wet weight (CMO:0000069)657730540104085867Rat
1576302Schws4Schwannoma susceptibility QTL 40.0078nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)683190345106747639Rat
1581550Pur8Proteinuria QTL 8urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)672227641130729205Rat
1641904Alcrsp4Alcohol response QTL 4response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)667262953112262953Rat
1581563Uae33Urinary albumin excretion QTL 33urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)672227641130729205Rat
1576309Emca7Estrogen-induced mammary cancer QTL 74mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)615107216107351382Rat
70176Mcsm1Mammary carcinoma susceptibility modifier QTL 1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)658632962103632962Rat
70196BpQTLcluster7Blood pressure QTL cluster 76.82arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)672202632117202632Rat
2290393Uae37Urinary albumin excretion QTL 370.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)665531555140994061Rat
724513Uae14Urinary albumin excretion QTL 146.5urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)685311061133478515Rat
724524Uae2Urinary albumin excretion QTL 22.70.0005urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)673463459109394713Rat
724536Uae7Urinary albumin excretion QTL 73.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)672202632130729475Rat
2293837Kiddil1Kidney dilation QTL 13.7kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)681132889104393926Rat
2293842Kiddil3Kidney dilation QTL 34.3kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)681132889104393926Rat
2303624Vencon5Ventilatory control QTL 54.45respiration trait (VT:0001943)minute ventilation (CMO:0000132)688047916133047916Rat
12801471Schws9Schwannoma susceptibility QTL 9nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)661747639106747639Rat
1331722Thshl1Thyroid stimulating hormone level QTL 111.70.0001blood thyroid-stimulating hormone amount (VT:0005119)serum thyroid stimulating hormone level (CMO:0001248)689762877106752806Rat

Markers in Region
D6Mit15  
Rat AssemblyChrPosition (strand)SourceJBrowse
Celera688,952,547 - 88,952,678UniSTS
RH 3.4 Map6648.3UniSTS
RH 3.4 Map6648.3RGD
RH 2.0 Map6845.4RGD
Cytogenetic Map6q24UniSTS
Daam1  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2690,505,521 - 90,505,804 (+)MAPPERmRatBN7.2
Rnor_6.0694,694,236 - 94,694,518NCBIRnor6.0
Rnor_5.06104,138,793 - 104,139,075UniSTSRnor5.0
RGSC_v3.4694,139,611 - 94,139,893UniSTSRGSC3.4
Celera688,971,566 - 88,971,848UniSTS
Cytogenetic Map6q24UniSTS
BI294805  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2690,537,019 - 90,537,218 (+)MAPPERmRatBN7.2
Rnor_6.0694,725,933 - 94,726,131NCBIRnor6.0
Rnor_5.06104,170,490 - 104,170,688UniSTSRnor5.0
RGSC_v3.4694,171,108 - 94,171,306UniSTSRGSC3.4
Celera689,003,494 - 89,003,692UniSTS
RH 3.4 Map6646.6UniSTS
Cytogenetic Map6q24UniSTS
RH129985  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2690,549,805 - 90,550,018 (+)MAPPERmRatBN7.2
Rnor_6.0694,738,718 - 94,738,930NCBIRnor6.0
Rnor_5.06104,183,275 - 104,183,487UniSTSRnor5.0
RGSC_v3.4694,183,894 - 94,184,106UniSTSRGSC3.4
Celera689,016,279 - 89,016,491UniSTS
RH 3.4 Map6653.59UniSTS
Cytogenetic Map6q24UniSTS
RH139208  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2690,548,943 - 90,549,142 (+)MAPPERmRatBN7.2
Rnor_6.0694,737,856 - 94,738,054NCBIRnor6.0
Rnor_5.06104,182,413 - 104,182,611UniSTSRnor5.0
RGSC_v3.4694,183,032 - 94,183,230UniSTSRGSC3.4
Celera689,015,417 - 89,015,615UniSTS
RH 3.4 Map6647.0UniSTS
Cytogenetic Map6q24UniSTS
RH140091  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2690,548,459 - 90,548,676 (+)MAPPERmRatBN7.2
Rnor_6.0694,737,372 - 94,737,588NCBIRnor6.0
Rnor_5.06104,181,929 - 104,182,145UniSTSRnor5.0
RGSC_v3.4694,182,548 - 94,182,764UniSTSRGSC3.4
Celera689,014,933 - 89,015,149UniSTS
RH 3.4 Map6651.2UniSTS
Cytogenetic Map6q24UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 38 57 41 14 41 1 1 74 27 35 11 1
Low 5 5 7 10 8 6 7
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000005846   ⟹   ENSRNOP00000005846
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl690,447,036 - 90,550,114 (+)Ensembl
Rnor_6.0 Ensembl694,636,222 - 94,739,026 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000108952   ⟹   ENSRNOP00000076705
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl690,447,036 - 90,550,114 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000110744   ⟹   ENSRNOP00000096283
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl690,389,688 - 90,548,806 (+)Ensembl
RefSeq Acc Id: NM_001108030   ⟹   NP_001101500
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8696,182,981 - 96,286,049 (+)NCBI
mRatBN7.2690,447,036 - 90,550,114 (+)NCBI
Rnor_6.0694,636,222 - 94,739,026 (+)NCBI
Rnor_5.06104,055,469 - 104,183,583 (+)NCBI
RGSC_v3.4694,081,666 - 94,184,202 (+)RGD
Celera688,912,980 - 89,016,587 (+)RGD
Sequence:
RefSeq Acc Id: XM_039112260   ⟹   XP_038968188
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8696,125,554 - 96,286,000 (+)NCBI
mRatBN7.2690,389,577 - 90,550,069 (+)NCBI
RefSeq Acc Id: XM_039112261   ⟹   XP_038968189
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8696,125,564 - 96,286,000 (+)NCBI
mRatBN7.2690,389,544 - 90,550,069 (+)NCBI
RefSeq Acc Id: XM_039112262   ⟹   XP_038968190
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8696,125,529 - 96,286,000 (+)NCBI
mRatBN7.2690,389,586 - 90,550,069 (+)NCBI
RefSeq Acc Id: XM_039112263   ⟹   XP_038968191
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8696,125,570 - 96,286,000 (+)NCBI
mRatBN7.2690,389,600 - 90,550,069 (+)NCBI
RefSeq Acc Id: XM_039112264   ⟹   XP_038968192
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8696,173,578 - 96,286,000 (+)NCBI
mRatBN7.2690,437,255 - 90,550,069 (+)NCBI
RefSeq Acc Id: XM_039112265   ⟹   XP_038968193
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8696,125,554 - 96,286,000 (+)NCBI
mRatBN7.2690,389,580 - 90,550,069 (+)NCBI
RefSeq Acc Id: XM_039112266   ⟹   XP_038968194
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8696,173,584 - 96,286,000 (+)NCBI
mRatBN7.2690,437,256 - 90,550,069 (+)NCBI
RefSeq Acc Id: XM_063261924   ⟹   XP_063117994
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8696,125,529 - 96,286,000 (+)NCBI
RefSeq Acc Id: XM_063261925   ⟹   XP_063117995
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8696,125,521 - 96,286,000 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: NP_001101500   ⟸   NM_001108030
- UniProtKB: D4ABM3 (UniProtKB/TrEMBL),   A6HC27 (UniProtKB/TrEMBL),   A0A8I5Y0A6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000005846   ⟸   ENSRNOT00000005846
RefSeq Acc Id: XP_038968189   ⟸   XM_039112261
- Peptide Label: isoform X1
- UniProtKB: A0A8I6GM04 (UniProtKB/TrEMBL),   A0A8I5Y0A6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038968188   ⟸   XM_039112260
- Peptide Label: isoform X1
- UniProtKB: A0A8I6GM04 (UniProtKB/TrEMBL),   A0A8I5Y0A6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038968193   ⟸   XM_039112265
- Peptide Label: isoform X2
- UniProtKB: A0A8I5Y0A6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038968190   ⟸   XM_039112262
- Peptide Label: isoform X1
- UniProtKB: A0A8I6GM04 (UniProtKB/TrEMBL),   A0A8I5Y0A6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038968191   ⟸   XM_039112263
- Peptide Label: isoform X1
- UniProtKB: A0A8I6GM04 (UniProtKB/TrEMBL),   A0A8I5Y0A6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038968192   ⟸   XM_039112264
- Peptide Label: isoform X1
- UniProtKB: A0A8I6GM04 (UniProtKB/TrEMBL),   A0A8I5Y0A6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038968194   ⟸   XM_039112266
- Peptide Label: isoform X1
- UniProtKB: A0A8I6GM04 (UniProtKB/TrEMBL),   A0A8I5Y0A6 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSRNOP00000096283   ⟸   ENSRNOT00000110744
RefSeq Acc Id: ENSRNOP00000076705   ⟸   ENSRNOT00000108952
RefSeq Acc Id: XP_063117995   ⟸   XM_063261925
- Peptide Label: isoform X2
RefSeq Acc Id: XP_063117994   ⟸   XM_063261924
- Peptide Label: isoform X2
Protein Domains
DAD   FH2   GBD/FH3

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D4ABM3-F1-model_v2 AlphaFold D4ABM3 1-968 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13694650
Promoter ID:EPDNEW_R5175
Type:multiple initiation site
Name:Daam1_1
Description:dishevelled associated activator of morphogenesis 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0694,636,151 - 94,636,211EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1305119 AgrOrtholog
BioCyc Gene G2FUF-37162 BioCyc
Ensembl Genes ENSRNOG00000004345 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000005846 ENTREZGENE
  ENSRNOT00000005846.5 UniProtKB/TrEMBL
  ENSRNOT00000108952.1 UniProtKB/TrEMBL
  ENSRNOT00000110744.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.58.2220 UniProtKB/TrEMBL
  1.25.10.10 UniProtKB/TrEMBL
  Formin, FH3 diaphanous domain UniProtKB/TrEMBL
  Nucleotidyltransferases domain 2 UniProtKB/TrEMBL
InterPro ARM-like UniProtKB/TrEMBL
  ARM-type_fold UniProtKB/TrEMBL
  Diaphanous_autoregulatory UniProtKB/TrEMBL
  Drf_FH3 UniProtKB/TrEMBL
  Drf_GTPase-bd UniProtKB/TrEMBL
  FH2_actin-bd UniProtKB/TrEMBL
  FH2_Formin_sf UniProtKB/TrEMBL
  GTPase-bd/formin_homology_3 UniProtKB/TrEMBL
KEGG Report rno:314212 UniProtKB/TrEMBL
NCBI Gene 314212 ENTREZGENE
PANTHER DISHEVELED-ASSOCIATED ACTIVATOR OF MORPHOGENESIS 1 UniProtKB/TrEMBL
  FORMIN HOMOLOGY 2 FAMILY MEMBER UniProtKB/TrEMBL
Pfam Drf_FH3 UniProtKB/TrEMBL
  Drf_GBD UniProtKB/TrEMBL
  FH2 UniProtKB/TrEMBL
PhenoGen Daam1 PhenoGen
PROSITE DAD UniProtKB/TrEMBL
  FH2 UniProtKB/TrEMBL
  GBD_FH3 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000004345 RatGTEx
SMART Drf_FH3 UniProtKB/TrEMBL
  Drf_GBD UniProtKB/TrEMBL
  FH2 UniProtKB/TrEMBL
Superfamily-SCOP ARM-type_fold UniProtKB/TrEMBL
  Formin homology 2 domain (FH2 domain) UniProtKB/TrEMBL
UniProt A0A8I5Y0A6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6GM04 ENTREZGENE, UniProtKB/TrEMBL
  A6HC27 ENTREZGENE, UniProtKB/TrEMBL
  D4ABM3 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-30 Daam1  dishevelled associated activator of morphogenesis 1   Daam1_predicted  dishevelled associated activator of morphogenesis 1 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Daam1_predicted  dishevelled associated activator of morphogenesis 1 (predicted)      Symbol and Name status set to approved 70820 APPROVED