Daam1 (dishevelled associated activator of morphogenesis 1) - Rat Genome Database

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Gene: Daam1 (dishevelled associated activator of morphogenesis 1) Rattus norvegicus
Analyze
Symbol: Daam1
Name: dishevelled associated activator of morphogenesis 1
RGD ID: 1305119
Description: Predicted to enable identical protein binding activity. Involved in presynaptic actin cytoskeleton organization. Is active in glutamatergic synapse and presynapse. Orthologous to human DAAM1 (dishevelled associated activator of morphogenesis 1); PARTICIPATES IN Wnt signaling, non-canonical pathway; Wnt signaling, the planar cell polarity pathway; Wnt signaling pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: disheveled-associated activator of morphogenesis 1; LOC314212
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8696,125,521 - 96,286,049 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl696,125,621 - 96,286,049 (+)EnsemblGRCr8
mRatBN7.2690,389,544 - 90,550,114 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl690,389,688 - 90,550,114 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx690,816,596 - 90,919,779 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0691,116,053 - 91,219,233 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0690,555,621 - 90,658,792 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0694,606,675 - 94,739,026 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl694,636,222 - 94,739,026 (+)Ensemblrn6Rnor6.0
Rnor_5.06104,055,469 - 104,183,583 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4694,081,666 - 94,184,202 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera688,912,980 - 89,016,587 (+)NCBICelera
RGSC_v3.1694,081,654 - 94,185,174 (+)NCBI
Cytogenetic Map6q24NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-demecolcine  (ISO)
(-)-epigallocatechin 3-gallate  (ISO)
(1->4)-beta-D-glucan  (ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (EXP)
2,6-dimethoxyphenol  (ISO)
2,6-dinitrotoluene  (EXP)
2-hydroxypropanoic acid  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
all-trans-retinoic acid  (ISO)
antimycin A  (ISO)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
azoxystrobin  (ISO)
benzo[a]pyrene  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
buspirone  (EXP)
cadmium dichloride  (ISO)
caffeine  (ISO)
carbon nanotube  (ISO)
chlordecone  (ISO)
chromium(6+)  (ISO)
cisplatin  (ISO)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
crocidolite asbestos  (ISO)
cyclosporin A  (ISO)
deguelin  (ISO)
dibutyl phthalate  (EXP)
doxorubicin  (ISO)
elemental selenium  (ISO)
endosulfan  (EXP)
ethanol  (ISO)
fenpyroximate  (ISO)
flutamide  (EXP)
FR900359  (ISO)
fulvestrant  (ISO)
furfural  (ISO)
gentamycin  (EXP)
glyphosate  (ISO)
GSK-J4  (ISO)
lead(0)  (ISO)
manganese atom  (ISO)
manganese(0)  (ISO)
manganese(II) chloride  (ISO)
methapyrilene  (EXP)
methylmercury chloride  (ISO)
nefazodone  (EXP)
nimesulide  (EXP)
oxaliplatin  (EXP)
paracetamol  (EXP,ISO)
perfluorooctane-1-sulfonic acid  (ISO)
phenobarbital  (ISO)
picoxystrobin  (ISO)
pirinixic acid  (ISO)
potassium chromate  (ISO)
pregnenolone 16alpha-carbonitrile  (ISO)
propiconazole  (ISO)
pyrimidifen  (ISO)
rac-lactic acid  (ISO)
rotenone  (ISO)
selenium atom  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
sodium chloride  (ISO)
succimer  (ISO)
sunitinib  (ISO)
tamibarotene  (ISO)
tebufenpyrad  (ISO)
tetrachloromethane  (EXP)
thifluzamide  (ISO)
titanium dioxide  (ISO)
topotecan  (EXP)
trichostatin A  (ISO)
triphenyl phosphate  (ISO)
troglitazone  (ISO)
urethane  (ISO)
valdecoxib  (EXP)
valproic acid  (ISO)
vincristine  (ISO)
vitamin E  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Planar cell polarity signaling in vertebrates. Jones C and Chen P, Bioessays. 2007 Feb;29(2):120-32.
3. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
4. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
6. Localization of the Diaphanous-related formin Daam1 to neuronal dendrites. Salomon SN, etal., Neurosci Lett. 2008 Dec 5;447(1):62-7. doi: 10.1016/j.neulet.2008.09.051. Epub 2008 Sep 25.
7. Piccolo Directs Activity Dependent F-Actin Assembly from Presynaptic Active Zones via Daam1. Wagh D, etal., PLoS One. 2015 Apr 21;10(4):e0120093. doi: 10.1371/journal.pone.0120093. eCollection 2015.
Additional References at PubMed
PMID:16630611   PMID:18162551   PMID:18218625   PMID:19946888   PMID:20534871   PMID:26514267   PMID:26644512   PMID:26831620   PMID:28332181   PMID:32353957  


Genomics

Comparative Map Data
Daam1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8696,125,521 - 96,286,049 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl696,125,621 - 96,286,049 (+)EnsemblGRCr8
mRatBN7.2690,389,544 - 90,550,114 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl690,389,688 - 90,550,114 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx690,816,596 - 90,919,779 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0691,116,053 - 91,219,233 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0690,555,621 - 90,658,792 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0694,606,675 - 94,739,026 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl694,636,222 - 94,739,026 (+)Ensemblrn6Rnor6.0
Rnor_5.06104,055,469 - 104,183,583 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4694,081,666 - 94,184,202 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera688,912,980 - 89,016,587 (+)NCBICelera
RGSC_v3.1694,081,654 - 94,185,174 (+)NCBI
Cytogenetic Map6q24NCBI
DAAM1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381459,188,667 - 59,371,405 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1459,188,646 - 59,371,405 (+)Ensemblhg38GRCh38
GRCh371459,655,385 - 59,838,123 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361458,725,152 - 58,906,224 (+)NCBIBuild 36Build 36hg18NCBI36
Build 341458,725,151 - 58,906,224NCBI
Celera1439,705,036 - 39,886,100 (+)NCBICelera
Cytogenetic Map14q23.1NCBI
HuRef1439,819,615 - 40,001,983 (+)NCBIHuRef
CHM1_11459,593,312 - 59,776,243 (+)NCBICHM1_1
T2T-CHM13v2.01453,395,543 - 53,578,348 (+)NCBIT2T-CHM13v2.0
Daam1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391271,877,834 - 72,039,150 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1271,877,852 - 72,039,107 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381271,830,950 - 71,992,376 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1271,831,078 - 71,992,333 (+)Ensemblmm10GRCm38
MGSCv371272,932,065 - 73,093,354 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361272,749,655 - 72,910,944 (+)NCBIMGSCv36mm8
Celera1272,944,641 - 73,102,220 (+)NCBICelera
Cytogenetic Map12C3NCBI
cM Map1230.06NCBI
Daam1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546612,954,242 - 13,127,076 (+)Ensembl
ChiLan1.0NW_00495546612,954,557 - 13,129,483 (+)NCBIChiLan1.0ChiLan1.0
DAAM1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21560,322,767 - 60,505,772 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11459,539,281 - 59,722,288 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01439,792,952 - 39,975,754 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11458,059,616 - 58,241,353 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1458,133,462 - 58,241,353 (+)EnsemblpanPan2panpan1.1
DAAM1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1834,475,045 - 34,641,843 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl834,476,646 - 34,640,231 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha834,235,875 - 34,402,396 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0834,710,887 - 34,877,521 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl834,710,937 - 34,875,420 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1834,328,018 - 34,494,795 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0834,397,374 - 34,563,910 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0834,764,445 - 34,931,060 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Daam1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864070,431,852 - 70,599,910 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364953,661,284 - 3,759,905 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049364953,591,611 - 3,757,646 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DAAM1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1188,335,384 - 188,511,096 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11188,335,335 - 188,511,094 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21209,404,401 - 209,532,217 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DAAM1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12436,406,841 - 36,588,993 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2436,406,847 - 36,589,045 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366605324,661,222 - 24,842,408 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Daam1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473441,708,570 - 41,866,887 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462473441,709,226 - 41,880,149 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Daam1
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1785,496,216 - 85,656,893 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Daam1
1167 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:324
Count of miRNA genes:214
Interacting mature miRNAs:251
Transcripts:ENSRNOT00000005846
Prediction methods:Microtar, Miranda
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4145119Mcs25Mammary carcinoma susceptibility QTL 250.0001mammary gland integrity trait (VT:0010552)ratio of deaths to total study population during a period of time (CMO:0001023)671278722116278722Rat
70176Mcsm1Mammary carcinoma susceptibility modifier QTL 1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)664367996109367996Rat
2293088Iddm28Insulin dependent diabetes mellitus QTL 285.21blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)668767270135411972Rat
1331799Bp211Blood pressure QTL 2113.66407arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)688019181136741135Rat
10054138Gmadr3Adrenal mass QTL 33.680.00045adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)690871046135871046Rat
1581563Uae33Urinary albumin excretion QTL 33urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)693560258136550638Rat
4889933Bss88Bone structure and strength QTL 883.8tibia size trait (VT:0100001)tibia total bone volume (CMO:0001724)65368492198684921Rat
724524Uae2Urinary albumin excretion QTL 22.70.0005urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)679198463144254945Rat
737827Hcar11Hepatocarcinoma resistance QTL 114.4liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)646050607116278722Rat
2303624Vencon5Ventilatory control QTL 54.45respiration trait (VT:0001943)minute ventilation (CMO:0000132)693778632138778632Rat
1576309Emca7Estrogen-induced mammary cancer QTL 74mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)620859430113082285Rat
2293837Kiddil1Kidney dilation QTL 13.7kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)686867923110125012Rat
61329Eae9Experimental allergic encephalomyelitis QTL 93.7body mass (VT:0001259)change in body weight (CMO:0002045)684490437129490437Rat
2293842Kiddil3Kidney dilation QTL 34.3kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)686867923110125012Rat
10054123Srcrt6Stress Responsive Cort QTL 62.50.0043blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)690871046135871046Rat
724536Uae7Urinary albumin excretion QTL 73.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)693560258136550638Rat
5684963Bss99Bone structure and strength QTL 993.1tibia area (VT:1000281)tibia area measurement (CMO:0001382)65368492198684921Rat
5684992Bmd83Bone mineral density QTL 824.8tibia mineral mass (VT:1000283)bone mineral content (CMO:0001554)65368492198684921Rat
1576302Schws4Schwannoma susceptibility QTL 40.0078nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)678204640123204640Rat
1581550Pur8Proteinuria QTL 8urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)693560258136550638Rat
1300075Glom7Glomerulus QTL 75.60.0000002kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)676937178121937178Rat
1331789Rf37Renal function QTL 373.224kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)686494122112380234Rat

Markers in Region
D6Mit15  
Rat AssemblyChrPosition (strand)SourceJBrowse
Celera688,952,547 - 88,952,678UniSTS
RH 3.4 Map6648.3UniSTS
RH 3.4 Map6648.3RGD
RH 2.0 Map6845.4RGD
Cytogenetic Map6q24UniSTS
Daam1  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2690,505,521 - 90,505,804 (+)MAPPERmRatBN7.2
Rnor_6.0694,694,236 - 94,694,518NCBIRnor6.0
Rnor_5.06104,138,793 - 104,139,075UniSTSRnor5.0
RGSC_v3.4694,139,611 - 94,139,893UniSTSRGSC3.4
Celera688,971,566 - 88,971,848UniSTS
Cytogenetic Map6q24UniSTS
BI294805  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8696,272,955 - 96,273,154 (+)Marker Load Pipeline
mRatBN7.2690,537,019 - 90,537,218 (+)MAPPERmRatBN7.2
Rnor_6.0694,725,933 - 94,726,131NCBIRnor6.0
Rnor_5.06104,170,490 - 104,170,688UniSTSRnor5.0
RGSC_v3.4694,171,108 - 94,171,306UniSTSRGSC3.4
Celera689,003,494 - 89,003,692UniSTS
RH 3.4 Map6646.6UniSTS
Cytogenetic Map6q24UniSTS
RH129985  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8696,285,740 - 96,285,953 (+)Marker Load Pipeline
mRatBN7.2690,549,805 - 90,550,018 (+)MAPPERmRatBN7.2
Rnor_6.0694,738,718 - 94,738,930NCBIRnor6.0
Rnor_5.06104,183,275 - 104,183,487UniSTSRnor5.0
RGSC_v3.4694,183,894 - 94,184,106UniSTSRGSC3.4
Celera689,016,279 - 89,016,491UniSTS
RH 3.4 Map6653.59UniSTS
Cytogenetic Map6q24UniSTS
RH139208  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2690,548,943 - 90,549,142 (+)MAPPERmRatBN7.2
Rnor_6.0694,737,856 - 94,738,054NCBIRnor6.0
Rnor_5.06104,182,413 - 104,182,611UniSTSRnor5.0
RGSC_v3.4694,183,032 - 94,183,230UniSTSRGSC3.4
Celera689,015,417 - 89,015,615UniSTS
RH 3.4 Map6647.0UniSTS
Cytogenetic Map6q24UniSTS
RH140091  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2690,548,459 - 90,548,676 (+)MAPPERmRatBN7.2
Rnor_6.0694,737,372 - 94,737,588NCBIRnor6.0
Rnor_5.06104,181,929 - 104,182,145UniSTSRnor5.0
RGSC_v3.4694,182,548 - 94,182,764UniSTSRGSC3.4
Celera689,014,933 - 89,015,149UniSTS
RH 3.4 Map6651.2UniSTS
Cytogenetic Map6q24UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 164 91 90 59 92 59 6 356 192 11 143 81 92 31 17 17

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001108030 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001433960 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001433961 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001433962 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001433963 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001433964 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001433965 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006240211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006240212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039112260 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039112261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039112262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039112263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039112264 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039112265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039112266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063261924 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063261925 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide CH473947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000005846   ⟹   ENSRNOP00000005846
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl696,182,981 - 96,286,049 (+)Ensembl
mRatBN7.2 Ensembl690,447,036 - 90,550,114 (+)Ensembl
Rnor_6.0 Ensembl694,636,222 - 94,739,026 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000108952   ⟹   ENSRNOP00000076705
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl696,182,981 - 96,286,049 (+)Ensembl
mRatBN7.2 Ensembl690,447,036 - 90,550,114 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000110744   ⟹   ENSRNOP00000096283
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl696,125,628 - 96,284,690 (+)Ensembl
mRatBN7.2 Ensembl690,389,688 - 90,548,806 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000137984   ⟹   ENSRNOP00000107911
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl696,206,386 - 96,284,690 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000162986   ⟹   ENSRNOP00000100888
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl696,125,621 - 96,284,689 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000166462   ⟹   ENSRNOP00000100667
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl696,190,955 - 96,284,690 (+)Ensembl
RefSeq Acc Id: NM_001108030   ⟹   NP_001101500
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8696,182,981 - 96,286,049 (+)NCBI
mRatBN7.2690,447,036 - 90,550,114 (+)NCBI
Rnor_6.0694,636,222 - 94,739,026 (+)NCBI
Rnor_5.06104,055,469 - 104,183,583 (+)NCBI
RGSC_v3.4694,081,666 - 94,184,202 (+)RGD
Celera688,912,980 - 89,016,587 (+)RGD
Sequence:
RefSeq Acc Id: XM_039112260   ⟹   XP_038968188
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8696,125,554 - 96,286,000 (+)NCBI
mRatBN7.2690,389,577 - 90,550,069 (+)NCBI
RefSeq Acc Id: XM_039112261   ⟹   XP_038968189
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8696,125,564 - 96,286,000 (+)NCBI
mRatBN7.2690,389,544 - 90,550,069 (+)NCBI
RefSeq Acc Id: XM_039112262   ⟹   XP_038968190
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8696,125,529 - 96,286,000 (+)NCBI
mRatBN7.2690,389,586 - 90,550,069 (+)NCBI
RefSeq Acc Id: XM_039112263   ⟹   XP_038968191
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8696,125,570 - 96,286,000 (+)NCBI
mRatBN7.2690,389,600 - 90,550,069 (+)NCBI
RefSeq Acc Id: XM_039112264   ⟹   XP_038968192
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8696,173,578 - 96,286,000 (+)NCBI
mRatBN7.2690,437,255 - 90,550,069 (+)NCBI
RefSeq Acc Id: XM_039112265   ⟹   XP_038968193
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8696,125,554 - 96,286,000 (+)NCBI
mRatBN7.2690,389,580 - 90,550,069 (+)NCBI
RefSeq Acc Id: XM_039112266   ⟹   XP_038968194
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8696,173,584 - 96,286,000 (+)NCBI
mRatBN7.2690,437,256 - 90,550,069 (+)NCBI
RefSeq Acc Id: XM_063261924   ⟹   XP_063117994
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8696,125,529 - 96,286,000 (+)NCBI
RefSeq Acc Id: XM_063261925   ⟹   XP_063117995
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8696,125,521 - 96,286,000 (+)NCBI
RefSeq Acc Id: NP_001101500   ⟸   NM_001108030
- UniProtKB: D4ABM3 (UniProtKB/TrEMBL),   A6HC27 (UniProtKB/TrEMBL),   A0A8I5Y0A6 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000005846   ⟸   ENSRNOT00000005846
RefSeq Acc Id: XP_038968189   ⟸   XM_039112261
- Peptide Label: isoform X1
- UniProtKB: A0A8I6GM04 (UniProtKB/TrEMBL),   A0A8I5Y0A6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038968188   ⟸   XM_039112260
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038968193   ⟸   XM_039112265
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038968190   ⟸   XM_039112262
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038968191   ⟸   XM_039112263
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038968192   ⟸   XM_039112264
- Peptide Label: isoform X1
- UniProtKB: A0A8I6GM04 (UniProtKB/TrEMBL),   A0A8I5Y0A6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038968194   ⟸   XM_039112266
- Peptide Label: isoform X1
- UniProtKB: A0A8I6GM04 (UniProtKB/TrEMBL),   A0A8I5Y0A6 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000096283   ⟸   ENSRNOT00000110744
Ensembl Acc Id: ENSRNOP00000076705   ⟸   ENSRNOT00000108952
RefSeq Acc Id: XP_063117995   ⟸   XM_063261925
- Peptide Label: isoform X2
RefSeq Acc Id: XP_063117994   ⟸   XM_063261924
- Peptide Label: isoform X2
Ensembl Acc Id: ENSRNOP00000100888   ⟸   ENSRNOT00000162986
Ensembl Acc Id: ENSRNOP00000100667   ⟸   ENSRNOT00000166462
Ensembl Acc Id: ENSRNOP00000107911   ⟸   ENSRNOT00000137984
Protein Domains
DAD   FH2   GBD/FH3

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D4ABM3-F1-model_v2 AlphaFold D4ABM3 1-968 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13694650
Promoter ID:EPDNEW_R5175
Type:multiple initiation site
Name:Daam1_1
Description:dishevelled associated activator of morphogenesis 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0694,636,151 - 94,636,211EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1305119 AgrOrtholog
BioCyc Gene G2FUF-37162 BioCyc
Ensembl Genes ENSRNOG00000004345 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000005846 ENTREZGENE
  ENSRNOT00000005846.6 UniProtKB/TrEMBL
  ENSRNOT00000108952.2 UniProtKB/TrEMBL
  ENSRNOT00000110744 ENTREZGENE
  ENSRNOT00000110744.2 UniProtKB/TrEMBL
  ENSRNOT00000137984 ENTREZGENE
  ENSRNOT00000137984.1 UniProtKB/TrEMBL
  ENSRNOT00000162986 ENTREZGENE
  ENSRNOT00000162986.1 UniProtKB/TrEMBL
  ENSRNOT00000166462.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.58.2220 UniProtKB/TrEMBL
  1.25.10.10 UniProtKB/TrEMBL
  Formin, FH3 diaphanous domain UniProtKB/TrEMBL
  Nucleotidyltransferases domain 2 UniProtKB/TrEMBL
InterPro ARM-like UniProtKB/TrEMBL
  ARM-type_fold UniProtKB/TrEMBL
  Diaphanous_autoregulatory UniProtKB/TrEMBL
  Drf_FH3 UniProtKB/TrEMBL
  Drf_GTPase-bd UniProtKB/TrEMBL
  FH2_actin-bd UniProtKB/TrEMBL
  FH2_Formin_sf UniProtKB/TrEMBL
  Formin_Homology UniProtKB/TrEMBL
  GTPase-bd/formin_homology_3 UniProtKB/TrEMBL
KEGG Report rno:314212 UniProtKB/TrEMBL
NCBI Gene 314212 ENTREZGENE
PANTHER DISHEVELED-ASSOCIATED ACTIVATOR OF MORPHOGENESIS 1 UniProtKB/TrEMBL
  FORMIN HOMOLOGY 2 FAMILY MEMBER UniProtKB/TrEMBL
Pfam Drf_FH3 UniProtKB/TrEMBL
  Drf_GBD UniProtKB/TrEMBL
  FH2 UniProtKB/TrEMBL
PhenoGen Daam1 PhenoGen
PROSITE DAD UniProtKB/TrEMBL
  FH2 UniProtKB/TrEMBL
  GBD_FH3 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000004345 RatGTEx
SMART Drf_FH3 UniProtKB/TrEMBL
  Drf_GBD UniProtKB/TrEMBL
  FH2 UniProtKB/TrEMBL
Superfamily-SCOP ARM-type_fold UniProtKB/TrEMBL
  Formin homology 2 domain (FH2 domain) UniProtKB/TrEMBL
UniProt A0A8I5Y0A6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6GM04 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0L8Q7_RAT UniProtKB/TrEMBL
  A0ABK0LGC8_RAT UniProtKB/TrEMBL
  A0ABK0LZA9_RAT UniProtKB/TrEMBL
  A6HC27 ENTREZGENE, UniProtKB/TrEMBL
  D4ABM3 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-30 Daam1  dishevelled associated activator of morphogenesis 1   Daam1_predicted  dishevelled associated activator of morphogenesis 1 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Daam1_predicted  dishevelled associated activator of morphogenesis 1 (predicted)      Symbol and Name status set to approved 70820 APPROVED