Plpp1 (phospholipid phosphatase 1) - Rat Genome Database

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Gene: Plpp1 (phospholipid phosphatase 1) Mus musculus
Analyze
Symbol: Plpp1
Name: phospholipid phosphatase 1
RGD ID: 732311
MGI Page MGI
Description: Enables diacylglycerol diphosphate phosphatase activity and lipid phosphatase activity. Involved in several processes, including phospholipid dephosphorylation; phospholipid metabolic process; and sphingolipid metabolic process. Located in caveola. Is expressed in several structures, including alimentary system; heart; nervous system; respiratory system; and sensory organ. Orthologous to human PLPP1 (phospholipid phosphatase 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 35 kDa PAP; Hic53; Hpic; Hpic53; hydrogen peroxide inducible protein 53; hydrogen peroxide-inducible protein 53; L; lipid phosphate phosphatase 1; lipid phosphate phosphohydrolase 1; LP; LPP-1; LPP1; m; mPAP; P; PAP-2a; PAP2-alpha; PAP2a; phosphatidate phosphohydrolase type 2a; phosphatidic acid phosphatase 2a; phosphatidic acid phosphatase type 2A; Ppap2a
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3913112,937,311 - 113,004,428 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl13112,937,326 - 113,004,428 (+)EnsemblGRCm39 Ensembl
GRCm3813112,800,777 - 112,867,894 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl13112,800,792 - 112,867,894 (+)EnsemblGRCm38mm10GRCm38
MGSCv3713113,591,000 - 113,657,888 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3613113,921,670 - 113,988,558 (+)NCBIMGSCv36mm8
Celera13117,114,952 - 117,183,310 (+)NCBICelera
Cytogenetic Map13D2.2NCBI
cM Map1363.93NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (ISO)
1,1-dichloroethene  (EXP)
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
3,3',5,5'-tetrabromobisphenol A  (EXP)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-diaminodiphenylmethane  (EXP,ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (EXP)
5-azacytidine  (ISO)
6-propyl-2-thiouracil  (ISO)
acrylamide  (ISO)
alendronic acid  (ISO)
all-trans-retinoic acid  (ISO)
amitrole  (ISO)
ammonium chloride  (ISO)
aristolochic acid A  (ISO)
arsenous acid  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[b]fluoranthene  (EXP)
bisphenol A  (EXP,ISO)
Bisphenol B  (ISO)
bisphenol F  (ISO)
carbon nanotube  (EXP)
chlorpyrifos  (EXP)
chrysene  (EXP)
cobalt dichloride  (ISO)
cocaine  (EXP)
dexamethasone  (ISO)
diarsenic trioxide  (ISO)
dibenz[a,h]anthracene  (EXP)
dibutyl phthalate  (EXP)
dichlorine  (ISO)
dicrotophos  (ISO)
diuron  (ISO)
divanadium pentaoxide  (EXP)
dorsomorphin  (ISO)
entinostat  (ISO)
ethanol  (EXP)
fipronil  (ISO)
flavonoids  (ISO)
fluoranthene  (EXP)
folic acid  (EXP)
fulvestrant  (ISO)
furan  (ISO)
hydrogen peroxide  (ISO)
indometacin  (ISO)
irinotecan  (ISO)
iron atom  (ISO)
iron(0)  (ISO)
isoflavones  (ISO)
lead(0)  (ISO)
leflunomide  (ISO)
lipopolysaccharide  (EXP)
lithocholic acid  (EXP)
menadione  (ISO)
methimazole  (ISO)
methotrexate  (ISO)
methoxychlor  (ISO)
methyl methanesulfonate  (ISO)
methylmercury(1+)  (ISO)
N,N-diethyl-m-toluamide  (ISO)
N-nitrosodimethylamine  (ISO)
ochratoxin A  (ISO)
oxaliplatin  (ISO)
ozone  (EXP,ISO)
paclitaxel  (ISO)
paracetamol  (EXP,ISO)
paraquat  (EXP,ISO)
perfluorohexanesulfonic acid  (EXP)
perfluorooctanoic acid  (ISO)
permethrin  (ISO)
phenobarbital  (ISO)
pirinixic acid  (EXP)
potassium chromate  (ISO)
pregnenolone 16alpha-carbonitrile  (EXP)
raloxifene  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
Soman  (ISO)
sulfadimethoxine  (ISO)
sulforaphane  (ISO)
sunitinib  (ISO)
tetrachloromethane  (EXP)
tetraphene  (EXP)
titanium dioxide  (EXP)
topotecan  (ISO)
tributylstannane  (ISO)
Tributyltin oxide  (EXP,ISO)
Triptolide  (ISO)
tris(2-butoxyethyl) phosphate  (ISO)
undecane  (ISO)
valproic acid  (ISO)
vinclozolin  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
apical plasma membrane  (ISO)
caveola  (IDA)
membrane  (ISO)
membrane raft  (ISO)
plasma membrane  (IBA,IDA,ISO,TAS)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
3. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
4. Mouse MP Annotation Import Pipeline RGD automated import pipeline
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:7556647   PMID:8702556   PMID:8889548   PMID:9733709   PMID:10349636   PMID:10359651   PMID:10425403   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11535125   PMID:12466851  
PMID:12477932   PMID:12520002   PMID:12637511   PMID:12856002   PMID:12925589   PMID:14610273   PMID:14681479   PMID:14687668   PMID:14725715   PMID:15461590   PMID:15782199   PMID:16141072  
PMID:16141073   PMID:17934213   PMID:18799693   PMID:19215222   PMID:21267068   PMID:21319224   PMID:21873635   PMID:24866789   PMID:25210149   PMID:25769037   PMID:27641493   PMID:28273928  
PMID:35364055  


Genomics

Comparative Map Data
Plpp1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3913112,937,311 - 113,004,428 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl13112,937,326 - 113,004,428 (+)EnsemblGRCm39 Ensembl
GRCm3813112,800,777 - 112,867,894 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl13112,800,792 - 112,867,894 (+)EnsemblGRCm38mm10GRCm38
MGSCv3713113,591,000 - 113,657,888 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3613113,921,670 - 113,988,558 (+)NCBIMGSCv36mm8
Celera13117,114,952 - 117,183,310 (+)NCBICelera
Cytogenetic Map13D2.2NCBI
cM Map1363.93NCBI
PLPP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38555,424,854 - 55,534,964 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl555,424,854 - 55,534,969 (-)EnsemblGRCh38hg38GRCh38
GRCh37554,720,682 - 54,830,792 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36554,756,439 - 54,866,630 (-)NCBINCBI36Build 36hg18NCBI36
Build 34554,756,441 - 54,866,630NCBI
Celera551,673,499 - 51,784,986 (-)NCBICelera
Cytogenetic Map5q11.2NCBI
HuRef551,693,650 - 51,804,240 (-)NCBIHuRef
CHM1_1554,724,563 - 54,834,769 (-)NCBICHM1_1
T2T-CHM13v2.0556,252,163 - 56,362,555 (-)NCBIT2T-CHM13v2.0
Plpp1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8246,172,202 - 46,233,632 (+)NCBIGRCr8
mRatBN7.2244,439,002 - 44,500,430 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl244,438,994 - 44,501,268 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx251,552,134 - 51,613,393 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0249,610,495 - 49,671,753 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0244,485,653 - 44,547,000 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0244,664,076 - 44,726,820 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl244,664,124 - 44,726,689 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0263,704,421 - 63,767,925 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4244,183,290 - 44,247,787 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1244,111,522 - 44,176,018 (+)NCBI
Celera240,217,653 - 40,278,745 (+)NCBICelera
Cytogenetic Map2q14NCBI
Plpp1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544612,229,395 - 12,279,737 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495544612,201,678 - 12,279,992 (+)NCBIChiLan1.0ChiLan1.0
PLPP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2458,406,345 - 58,516,396 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1556,560,006 - 56,670,025 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0558,495,348 - 58,605,309 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1560,150,260 - 60,228,157 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl560,160,274 - 60,227,806 (+)Ensemblpanpan1.1panPan2
PLPP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1242,761,712 - 42,854,515 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl242,763,026 - 42,854,802 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha239,806,419 - 39,902,878 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0243,224,892 - 43,322,003 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl243,226,839 - 43,322,180 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1240,303,269 - 40,400,338 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0241,105,130 - 41,201,661 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0241,925,546 - 42,022,369 (-)NCBIUU_Cfam_GSD_1.0
Plpp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213203,328,791 - 203,421,183 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648012,265,246 - 12,359,450 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648012,265,304 - 12,357,747 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PLPP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1634,600,719 - 34,744,437 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11634,604,367 - 34,741,524 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21636,713,167 - 36,857,699 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PLPP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1451,667,336 - 51,777,016 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl451,667,684 - 51,776,981 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666049543,552 - 652,675 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Plpp1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247593,780,826 - 3,868,869 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247593,780,904 - 3,868,867 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Plpp1
2832 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:389
Count of miRNA genes:313
Interacting mature miRNAs:333
Transcripts:ENSMUST00000016144, ENSMUST00000070951
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10043997Bw40_mbody weight QTL 40 (mouse)Not determined1479239045113239162Mouse
10045623Heal18_mwound healing regeneration 18 (mouse)Not determined1379239045113239162Mouse
1558741Ses10_msalmonella enteritidis susceptibility 10 (mouse)Not determined1382739968116740106Mouse
4142465Pbwg17_mpostnatal body weight growth 17 (mouse)Not determined1383876060117876256Mouse
14700691Cisaq1_mcoxsackieviral infection serum ALT QTL 1 (mouse)1386148119120461536Mouse
4140995Fbtq6_mfemoral bone trait QTL 6 (mouse)Not determined1386341617120341758Mouse
1300939Hrtfm6_mheart failure modifier 6 (mouse)Not determined1391383692120883175Mouse
1300876Tanidd2_mtally ho associated non-insulin dependednt diabetes mellitus 2 (mouse)Not determined1391965303120883175Mouse
1301142Heal2_mwound healing/regeneration 2 (mouse)Not determined1393875267120883175Mouse
4142338Skmw18_mskeletal muscle weight 18 (mouse)Not determined1394528399120883175Mouse
1558763Gct9_mgranulosa cell tumorigenesis 9 (mouse)Not determined1395036824120883175Mouse
1357468Rplag_mreduced platelet aggregation (mouse)Not determined1395502130120883175Mouse
14746974Manh75_mmandible shape 75 (mouse)1399386647120883175Mouse
12879496Fexq2_mfear expression QTL 2 (mouse)13100741519120883175Mouse
4142400Tgq24_mtriglyceride QTL 24 (mouse)Not determined102602630120883175Mouse
4141826Tbqt5_mtibia bone quality traits 5 (mouse)Not determined13103341617117043216Mouse
4142334Svtms_msurvival time modifier of Sod2 (mouse)Not determined13107613580119476372Mouse
4141704Hipq1_mhyperinsulin production QTL 1 (mouse)Not determined110409487119476372Mouse

Markers in Region
D13Mit262  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3813112,814,230 - 112,814,354UniSTSGRCm38
MGSCv3713113,604,438 - 113,604,562UniSTSGRCm37
Celera13117,128,613 - 117,128,727UniSTS
Cytogenetic Map13D2.2UniSTS
cM Map1368.0UniSTS
Whitehead Genetic1347.0UniSTS
Whitehead/MRC_RH13975.05UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_008247 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_008903 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC159242 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC165265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK077275 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK190923 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK195536 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK203135 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK205792 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY247795 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY247796 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY247797 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB851583 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC061161 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY094239 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CD742481 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466568 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  D84376 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L43371 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000016144   ⟹   ENSMUSP00000016144
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl13112,937,326 - 113,004,428 (+)Ensembl
GRCm38.p6 Ensembl13112,800,792 - 112,867,894 (+)Ensembl
RefSeq Acc Id: ENSMUST00000070951   ⟹   ENSMUSP00000064423
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl13112,937,397 - 113,004,176 (+)Ensembl
GRCm38.p6 Ensembl13112,800,863 - 112,867,642 (+)Ensembl
RefSeq Acc Id: NM_008247   ⟹   NP_032273
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3913112,937,311 - 113,004,428 (+)NCBI
GRCm3813112,800,777 - 112,867,894 (+)NCBI
MGSCv3713113,591,000 - 113,657,888 (+)RGD
Celera13117,114,937 - 117,183,524 (+)NCBI
cM Map13 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_008903   ⟹   NP_032929
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3913112,937,311 - 113,004,428 (+)NCBI
GRCm3813112,800,777 - 112,867,894 (+)NCBI
MGSCv3713113,591,000 - 113,657,888 (+)RGD
Celera13117,114,937 - 117,183,524 (+)NCBI
cM Map13 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_032273   ⟸   NM_008247
- Peptide Label: isoform 1
- UniProtKB: Q61469 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_032929   ⟸   NM_008903
- Peptide Label: isoform 2
- UniProtKB: Q6GT30 (UniProtKB/Swiss-Prot),   Q61690 (UniProtKB/Swiss-Prot),   Q8BPB8 (UniProtKB/Swiss-Prot),   Q61469 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000064423   ⟸   ENSMUST00000070951
RefSeq Acc Id: ENSMUSP00000016144   ⟸   ENSMUST00000016144

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q61469-F1-model_v2 AlphaFold Q61469 1-283 view protein structure

Promoters
RGD ID:8681318
Promoter ID:EPDNEW_M18689
Type:initiation region
Name:Plpp1_1
Description:Mus musculus phospholipid phosphatase 1 , transcript variant1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M18690  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3813112,800,809 - 112,800,869EPDNEW
RGD ID:8681320
Promoter ID:EPDNEW_M18690
Type:single initiation site
Name:Plpp1_2
Description:Mus musculus phospholipid phosphatase 1 , transcript variant1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M18689  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3813112,801,169 - 112,801,229EPDNEW
RGD ID:6823546
Promoter ID:MM_KWN:15283
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:AK007275_1700125C05RIK,   ENSMUST00000016144,   UC007RWQ.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3613113,590,721 - 113,591,907 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:108412 AgrOrtholog
Ensembl Genes ENSMUSG00000021759 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000016144 ENTREZGENE
  ENSMUST00000016144.12 UniProtKB/Swiss-Prot
  ENSMUST00000070951 ENTREZGENE
  ENSMUST00000070951.8 UniProtKB/Swiss-Prot
Gene3D-CATH Phosphatidic acid phosphatase type 2/haloperoxidase UniProtKB/Swiss-Prot
InterPro P_Acid_Pase_2/haloperoxi_sf UniProtKB/Swiss-Prot
  P_Acid_Pase_2/haloperoxidase UniProtKB/Swiss-Prot
  PLPP UniProtKB/Swiss-Prot
KEGG Report mmu:19012 UniProtKB/Swiss-Prot
MGD MGI:108412 ENTREZGENE
NCBI Gene 19012 ENTREZGENE
PANTHER PTHR10165 UniProtKB/Swiss-Prot
  PTHR10165:SF26 UniProtKB/Swiss-Prot
Pfam PAP2 UniProtKB/Swiss-Prot
PhenoGen Plpp1 PhenoGen
SMART acidPPc UniProtKB/Swiss-Prot
Superfamily-SCOP SSF48317 UniProtKB/Swiss-Prot
UniProt PLPP1_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q61690 ENTREZGENE
  Q6GT30 ENTREZGENE
  Q8BPB8 ENTREZGENE
UniProt Secondary Q61690 UniProtKB/Swiss-Prot
  Q6GT30 UniProtKB/Swiss-Prot
  Q8BPB8 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-11-17 Plpp1  phospholipid phosphatase 1  Ppap2a  phosphatidic acid phosphatase type 2A  Symbol and/or name change 5135510 APPROVED