Fabp5 (fatty acid binding protein 5, epidermal) - Rat Genome Database

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Gene: Fabp5 (fatty acid binding protein 5, epidermal) Mus musculus
Analyze
Symbol: Fabp5
Name: fatty acid binding protein 5, epidermal
RGD ID: 731966
MGI Page MGI
Description: Enables retinoic acid binding activity. Involved in several processes, including positive regulation of cold-induced thermogenesis; positive regulation of peroxisome proliferator activated receptor signaling pathway; and regulation of retrograde trans-synaptic signaling by endocanabinoid. Acts upstream of or within several processes, including glucose homeostasis; negative regulation of glucose transmembrane transport; and phosphatidylcholine biosynthetic process. Located in several cellular components, including extracellular space; nucleus; and postsynaptic density. Is active in glutamatergic synapse; postsynaptic cytosol; and postsynaptic density, intracellular component. Is expressed in several structures, including central nervous system; jaw; peripheral nervous system ganglion; retina; and skin. Orthologous to several human genes including FABP5 (fatty acid binding protein 5).
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: E-FABP; epidermal-type fatty acid-binding protein; epithelial fatty acid-binding protein; Fabpe; Fabpe E-FABP; fatty acid-binding protein 5; fatty acid-binding protein, epidermal; keratinocyte lipid binding protein; keratinocyte lipid-binding protein; Kl; Klbp; ma; mal1; PA-FABP; psoriasis-associated fatty acid-binding protein homolog; putative Fabp5 product; uncharacterized protein LOC16592
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Fabp5l2   Gm13998   Gm14328   Gm6100   Gm6166  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39310,077,645 - 10,081,670 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl310,077,608 - 10,081,667 (+)EnsemblGRCm39 Ensembl
GRCm38310,012,585 - 10,016,610 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl310,012,548 - 10,016,607 (+)EnsemblGRCm38mm10GRCm38
MGSCv37310,012,606 - 10,016,610 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3639,995,138 - 9,999,142 (+)NCBIMGSCv36mm8
Celera310,036,283 - 10,040,303 (+)NCBICelera
Cytogenetic Map3A1NCBI
cM Map32.47NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (EXP)
1,2-dichloroethane  (EXP)
1-naphthyl isothiocyanate  (ISO)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (EXP,ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP,ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (EXP)
2,4-dinitrotoluene  (ISO)
2-butan-2-yl-4-[4-[4-[4-[[2-(2,4-dichlorophenyl)-2-(1,2,4-triazol-1-ylmethyl)-1,3-dioxolan-4-yl]methoxy]phenyl]-1-piperazinyl]phenyl]-1,2,4-triazol-3-one  (EXP)
2-butoxyethanol  (EXP)
2-hydroxypropanoic acid  (ISO)
2-palmitoylglycerol  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
3,3',5-triiodo-L-thyronine  (ISO)
3,4-methylenedioxymethamphetamine  (EXP)
3-isobutyl-1-methyl-7H-xanthine  (EXP,ISO)
3H-1,2-dithiole-3-thione  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (EXP,ISO)
5-aza-2'-deoxycytidine  (ISO)
6-propyl-2-thiouracil  (ISO)
9-cis-retinoic acid  (ISO)
aflatoxin B1  (EXP,ISO)
Alisol B  (EXP)
all-trans-4-oxoretinoic acid  (ISO)
all-trans-retinoic acid  (ISO)
amitrole  (ISO)
ammonium chloride  (ISO)
amphetamine  (ISO)
antirheumatic drug  (ISO)
arsane  (EXP,ISO)
arsenic atom  (EXP,ISO)
arsenite(3-)  (ISO)
arsenous acid  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[b]fluoranthene  (EXP)
Benzo[k]fluoranthene  (EXP)
beta-hexachlorocyclohexane  (EXP)
bis(2-chloroethyl) sulfide  (ISO)
bis(2-ethylhexyl) phthalate  (EXP,ISO)
bisphenol A  (EXP,ISO)
Brodifacoum  (ISO)
buspirone  (ISO)
butanal  (ISO)
Butylbenzyl phthalate  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
calciol  (EXP)
capsaicin  (ISO)
carbon nanotube  (EXP,ISO)
carnosic acid  (EXP)
CGP 52608  (ISO)
chloropicrin  (ISO)
choline  (EXP,ISO)
ciguatoxin CTX1B  (EXP)
cisplatin  (ISO)
clofibrate  (EXP)
clofibric acid  (ISO)
cobalt dichloride  (ISO)
copper atom  (EXP)
copper(0)  (EXP)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
cyanocob(III)alamin  (EXP)
dexamethasone  (EXP,ISO)
diarsenic trioxide  (ISO)
dibutyl phthalate  (ISO)
dichlorine  (ISO)
dichloroacetic acid  (EXP)
diclofenac  (EXP)
diethyl phthalate  (ISO)
diethylstilbestrol  (EXP)
difenoconazole  (EXP)
diisobutyl phthalate  (ISO)
diisononyl phthalate  (ISO)
dioxygen  (ISO)
dipotassium bis[mu-tartrato(4-)]diantimonate(2-) trihydrate  (ISO)
diuron  (ISO)
dorsomorphin  (ISO)
doxorubicin  (EXP,ISO)
emodin  (EXP)
endosulfan  (ISO)
enzyme inhibitor  (ISO)
epoxiconazole  (EXP)
ethanol  (EXP,ISO)
ethyl methanesulfonate  (ISO)
flutamide  (ISO)
folic acid  (EXP,ISO)
fonofos  (ISO)
fulvestrant  (ISO)
furan  (ISO)
gentamycin  (ISO)
glafenine  (ISO)
glycine betaine  (EXP)
graphene oxide  (EXP)
hydrogen peroxide  (ISO)
indometacin  (ISO)
inulin  (EXP)
isoprenaline  (EXP)
isotretinoin  (ISO)
itraconazole  (EXP)
ivermectin  (ISO)
ketoconazole  (EXP,ISO)
L-methionine  (EXP,ISO)
lead(0)  (ISO)
melphalan  (ISO)
mercury atom  (ISO)
mercury(0)  (ISO)
methcathinone  (ISO)
methimazole  (ISO)
methyl methanesulfonate  (ISO)
methylisothiazolinone  (ISO)
methylmercury chloride  (ISO)
microcystin RR  (ISO)
monosodium L-glutamate  (EXP)
N-methyl-4-phenylpyridinium  (ISO)
N-nitrosodiethylamine  (EXP,ISO)
nefazodone  (ISO)
nickel sulfate  (ISO)
nimesulide  (ISO)
nitrofen  (ISO)
ochratoxin A  (ISO)
ozone  (EXP,ISO)
paracetamol  (EXP,ISO)
paraquat  (EXP)
parathion  (ISO)
perfluorobutyric acid  (EXP)
perfluorohexanesulfonic acid  (EXP)
perfluorooctane-1-sulfonic acid  (EXP,ISO)
perfluorooctanoic acid  (ISO)
phenacetin  (ISO)
phenformin  (ISO)
phenobarbital  (EXP,ISO)
phenylhydrazine  (ISO)
piperonyl butoxide  (ISO)
pirinixic acid  (EXP)
pravastatin  (EXP,ISO)
pregnenolone 16alpha-carbonitrile  (EXP,ISO)
progesterone  (EXP)
propiconazole  (EXP)
protein kinase inhibitor  (ISO)
quercetin  (EXP)
quinolin-8-ol  (EXP)
rac-lactic acid  (ISO)
rotenone  (ISO)
sarin  (ISO)
SB 431542  (ISO)
silicon dioxide  (EXP,ISO)
sodium arsenate  (ISO)
sodium arsenite  (EXP,ISO)
sodium dichromate  (EXP,ISO)
Soman  (ISO)
sulfadimethoxine  (ISO)
sunitinib  (ISO)
terbufos  (ISO)
testosterone  (EXP)
tetrachloromethane  (EXP)
thalidomide  (EXP)
thioacetamide  (ISO)
titanium dioxide  (ISO)
toluene  (ISO)
tributylstannane  (EXP)
trichostatin A  (ISO)
triphenyl phosphate  (ISO)
Triptolide  (EXP)
troglitazone  (EXP)
tungsten  (EXP)
urethane  (ISO)
valdecoxib  (ISO)
valproic acid  (ISO)
vorinostat  (ISO)
zaragozic acid A  (EXP,ISO)
zinc atom  (EXP,ISO)
zinc sulfate  (ISO)
zinc(0)  (EXP,ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Gene expression profiling of Japanese psoriatic skin reveals an increased activity in molecular stress and immune response signals. Kulski JK, etal., J Mol Med. 2005 Dec;83(12):964-75. Epub 2005 Nov 11.
3. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
4. MGDs mouse GO annotations MGD data from the GO Consortium
5. Physiological insights into all-trans-retinoic acid biosynthesis. Napoli JL Biochim Biophys Acta. 2012 Jan;1821(1):152-67. Epub 2011 May 19.
6. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
7. Mouse MP Annotation Import Pipeline RGD automated import pipeline
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
9. PDLIM4 repression by hypermethylation as a potential biomarker for prostate cancer. Vanaja DK, etal., Clin Cancer Res. 2006 Feb 15;12(4):1128-36.
Additional References at PubMed
PMID:8349619   PMID:8889548   PMID:9666100   PMID:9795232   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11757913   PMID:11819097   PMID:11874481   PMID:11931385   PMID:12386159  
PMID:12477932   PMID:12479572   PMID:12540600   PMID:13129924   PMID:15164767   PMID:15212142   PMID:15226823   PMID:15342681   PMID:15353487   PMID:15489334   PMID:15582152   PMID:15589691  
PMID:15782199   PMID:16054052   PMID:16141072   PMID:16141073   PMID:16303844   PMID:16400526   PMID:16411018   PMID:16602821   PMID:16684508   PMID:16804058   PMID:16882015   PMID:16885566  
PMID:16998848   PMID:17512406   PMID:17579051   PMID:18025090   PMID:18485924   PMID:18551191   PMID:18805087   PMID:18805411   PMID:19494286   PMID:19787366   PMID:19956834   PMID:20238174  
PMID:21068754   PMID:21267068   PMID:21296956   PMID:21474828   PMID:21565611   PMID:21677750   PMID:21873635   PMID:21978752   PMID:22096492   PMID:22581784   PMID:22585040   PMID:22716252  
PMID:22901559   PMID:22916088   PMID:23105114   PMID:23144710   PMID:23620511   PMID:23624787   PMID:23663740   PMID:23722546   PMID:23968980   PMID:24003143   PMID:24114376   PMID:24154525  
PMID:24244493   PMID:24603714   PMID:24644281   PMID:24713431   PMID:24879443   PMID:25027319   PMID:25122651   PMID:25268051   PMID:25312643   PMID:25340345   PMID:25628425   PMID:25779666  
PMID:25992864   PMID:26105806   PMID:26311517   PMID:26416771   PMID:26592976   PMID:26625874   PMID:27588422   PMID:27852782   PMID:28219080   PMID:28378742   PMID:28500502   PMID:28589954  
PMID:28911862   PMID:28941596   PMID:29020626   PMID:29105065   PMID:29440395   PMID:29457656   PMID:29531087   PMID:29554241   PMID:29559340   PMID:29570114   PMID:29626089   PMID:29688375  
PMID:30100196   PMID:30389914   PMID:30471926   PMID:30713523   PMID:30866899   PMID:30884482   PMID:30886049   PMID:31112136   PMID:31220272   PMID:32325033   PMID:33024217   PMID:33124722  
PMID:33257783   PMID:33398436   PMID:33929718   PMID:33982279   PMID:33994513   PMID:34160301   PMID:34321999   PMID:34449874   PMID:34624687   PMID:34876574   PMID:34942197   PMID:35195769  
PMID:35202717   PMID:35408851   PMID:35436029   PMID:35655086   PMID:35689447   PMID:35831318   PMID:36100327   PMID:36293380   PMID:36384126   PMID:36426981   PMID:36481733   PMID:36788730  
PMID:37716413   PMID:37839992   PMID:37967009   PMID:38373971  


Genomics

Comparative Map Data
Fabp5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39310,077,645 - 10,081,670 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl310,077,608 - 10,081,667 (+)EnsemblGRCm39 Ensembl
GRCm38310,012,585 - 10,016,610 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl310,012,548 - 10,016,607 (+)EnsemblGRCm38mm10GRCm38
MGSCv37310,012,606 - 10,016,610 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3639,995,138 - 9,999,142 (+)NCBIMGSCv36mm8
Celera310,036,283 - 10,040,303 (+)NCBICelera
Cytogenetic Map3A1NCBI
cM Map32.47NCBI
FABP5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38881,280,536 - 81,284,775 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl881,280,536 - 81,284,777 (+)EnsemblGRCh38hg38GRCh38
GRCh37882,192,771 - 82,197,010 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36882,355,340 - 82,359,563 (+)NCBINCBI36Build 36hg18NCBI36
Build 34882,355,339 - 82,359,563NCBI
Celera878,197,737 - 78,201,964 (+)NCBICelera
Cytogenetic Map8q21.13NCBI
HuRef877,682,447 - 77,686,745 (+)NCBIHuRef
CHM1_1882,244,290 - 82,248,584 (+)NCBICHM1_1
T2T-CHM13v2.0881,712,114 - 81,716,359 (+)NCBIT2T-CHM13v2.0
Fabp5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8293,672,451 - 93,676,186 (-)NCBIGRCr8
mRatBN7.2291,765,056 - 91,768,716 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl291,765,056 - 91,853,773 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx298,262,009 - 98,265,679 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0296,383,007 - 96,386,677 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0291,439,871 - 91,443,541 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0293,981,662 - 93,985,322 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl293,981,656 - 93,985,378 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02113,735,156 - 113,738,856 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera287,366,175 - 87,369,839 (-)NCBICelera
Cytogenetic Map2q23NCBI
Fabp5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955444325,515 - 331,516 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955444325,515 - 329,248 (-)NCBIChiLan1.0ChiLan1.0
FABP5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2797,018,311 - 97,022,694 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1872,646,170 - 72,650,553 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0877,803,369 - 77,807,630 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1879,426,678 - 79,430,879 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl879,426,684 - 79,430,879 (+)Ensemblpanpan1.1panPan2
LOC102155424
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X35,086,820 - 35,087,968 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX22,435,088 - 22,436,224 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X35,135,219 - 35,136,355 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1X35,214,287 - 35,215,423 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X35,186,976 - 35,188,112 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X35,229,782 - 35,230,918 (+)NCBIUU_Cfam_GSD_1.0
Fabp5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530350,691,127 - 50,695,573 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049366562,881,552 - 2,886,192 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FABP5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl455,275,205 - 55,282,908 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1455,277,831 - 55,282,585 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2460,306,428 - 60,311,182 (-)NCBISscrofa10.2Sscrofa10.2susScr3
FABP5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1876,696,899 - 76,701,459 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366603964,492,525 - 64,497,788 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Fabp5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474410,129,515 - 10,133,700 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Fabp5
101 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:158
Count of miRNA genes:123
Interacting mature miRNAs:125
Transcripts:ENSMUST00000029046, ENSMUST00000123744
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301256Skmw1_mskeletal muscle weight 1 (mouse)Not determined3125786432Mouse
26884436Zlq3_mzygomatic length QTL 3, 10 week (mouse)33265060142405761Mouse
1300559Thypr3_mthymocyte proliferative response 3 (mouse)Not determined3452541938525519Mouse
12798540Scvg2_msubcutaneous vessel growth QTL 2 (mouse)3744981526249645Mouse
1558925Hivan1_mHIV-associated nephropathy 1 (mouse)Not determined3758617468716946Mouse
4142399Aec1_mautoimmune exocrinopathy 1 (mouse)Not determined7586174102690034Mouse

Markers in Region
Fabp5  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38957,484,095 - 57,484,324UniSTSGRCm38
GRCm381874,303,572 - 74,303,799UniSTSGRCm38
MGSCv371874,463,226 - 74,463,453UniSTSGRCm37
MGSCv37957,331,902 - 57,332,131UniSTSGRCm37
Celera1875,533,199 - 75,533,426UniSTS
Celera954,719,745 - 54,719,974UniSTS
Cytogenetic Map18E2UniSTS
Cytogenetic Map3A1-A3UniSTS
cM Map3 UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001272097 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001272098 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_010634 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC157379 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AH007032 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ223066 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK008782 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK011551 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK166506 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167389 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK216545 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC002008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC053042 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC100543 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BE987062 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466577 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  W54445 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X70100 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000029046   ⟹   ENSMUSP00000029046
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl310,077,608 - 10,081,667 (+)Ensembl
GRCm38.p6 Ensembl310,012,548 - 10,016,607 (+)Ensembl
RefSeq Acc Id: ENSMUST00000123744
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl310,077,665 - 10,081,395 (+)Ensembl
GRCm38.p6 Ensembl310,012,605 - 10,016,335 (+)Ensembl
RefSeq Acc Id: NM_001272097   ⟹   NP_001259026
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39310,077,645 - 10,081,670 (+)NCBI
GRCm38310,012,585 - 10,016,610 (+)NCBI
Celera310,036,262 - 10,040,303 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001272098   ⟹   NP_001259027
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39310,077,645 - 10,081,670 (+)NCBI
GRCm38310,012,585 - 10,016,610 (+)NCBI
Celera310,036,262 - 10,040,303 (+)NCBI
Sequence:
RefSeq Acc Id: NM_010634   ⟹   NP_034764
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39310,077,645 - 10,081,670 (+)NCBI
GRCm38310,012,585 - 10,016,610 (+)NCBI
MGSCv37310,012,606 - 10,016,610 (+)RGD
Celera310,036,262 - 10,040,303 (+)NCBI
cM Map3 ENTREZGENE
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_034764   ⟸   NM_010634
- Peptide Label: isoform 1
- UniProtKB: Q05816 (UniProtKB/Swiss-Prot),   Q497I3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001259026   ⟸   NM_001272097
- Peptide Label: isoform 2
- Sequence:
RefSeq Acc Id: NP_001259027   ⟸   NM_001272098
- Peptide Label: isoform 3
- Sequence:
RefSeq Acc Id: ENSMUSP00000029046   ⟸   ENSMUST00000029046
Protein Domains
Cytosolic fatty-acid binding proteins

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q05816-F1-model_v2 AlphaFold Q05816 1-135 view protein structure

Promoters
RGD ID:6833759
Promoter ID:MM_KWN:33752
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:OTTMUST00000074134,   OTTMUST00000074135
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36310,011,976 - 10,014,777 (+)MPROMDB
RGD ID:6880224
Promoter ID:EPDNEW_M3563
Type:multiple initiation site
Name:Fabp5_1
Description:Mus musculus fatty acid binding protein 5, epidermal , transcriptvariant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38310,012,591 - 10,012,651EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:101790 AgrOrtholog
Ensembl Genes ENSMUSG00000027533 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000029046 ENTREZGENE
  ENSMUST00000029046.9 UniProtKB/Swiss-Prot
Gene3D-CATH 2.40.128.20 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Calycin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Fatty_acid-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ILBP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Lipocln_cytosolic_FA-bd_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:16592 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:101790 ENTREZGENE
NCBI Gene 16592 ENTREZGENE
PANTHER FATTY ACID-BINDING PROTEIN 5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR11955 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Lipocalin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Fabp5 PhenoGen
PRINTS FATTYACIDBP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE FABP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF50814 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt FABP5_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q3TLH6_MOUSE UniProtKB/TrEMBL
  Q497I3 ENTREZGENE, UniProtKB/TrEMBL