Opn1sw (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 4 | 58,942,685 - 58,945,825 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 4 | 57,977,317 - 57,980,457 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 4 | 57,977,313 - 57,980,457 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 4 | 62,960,385 - 62,963,525 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 4 | 58,876,538 - 58,879,678 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 4 | 57,278,435 - 57,281,575 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 4 | 56,653,840 - 56,656,980 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 4 | 56,653,844 - 56,656,980 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 4 | 56,421,001 - 56,424,141 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 4 | 56,256,846 - 56,259,986 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 4 | 56,512,971 - 56,516,112 (-) | NCBI | | | | | Celera | 4 | 53,085,329 - 53,088,469 (-) | NCBI | | Celera | | | Cytogenetic Map | 4 | q22 | NCBI | | | | |
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OPN1SW (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 7 | 128,772,485 - 128,775,794 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 7 | 128,772,485 - 128,775,794 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 7 | 128,412,539 - 128,415,848 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 7 | 128,199,783 - 128,203,087 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 7 | 128,006,497 - 128,009,802 | NCBI | | | | | Celera | 7 | 123,208,297 - 123,211,598 (-) | NCBI | | Celera | | | Cytogenetic Map | 7 | q32.1 | NCBI | | | | | HuRef | 7 | 122,773,527 - 122,776,828 (-) | NCBI | | HuRef | | | CHM1_1 | 7 | 128,345,783 - 128,349,084 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 7 | 130,084,638 - 130,087,947 (-) | NCBI | | T2T-CHM13v2.0 | | | CRA_TCAGchr7v2 | 7 | 127,795,527 - 127,798,828 (-) | NCBI | | | | |
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Opn1sw (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 6 | 29,376,670 - 29,380,512 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 6 | 29,376,670 - 29,388,467 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 6 | 29,376,671 - 29,380,513 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 6 | 29,376,671 - 29,388,468 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 6 | 29,326,671 - 29,330,513 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 6 | 29,326,680 - 29,330,490 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 6 | 29,383,859 - 29,387,702 (-) | NCBI | | Celera | | | Cytogenetic Map | 6 | A3.3 | NCBI | | | | | cM Map | 6 | 12.36 | NCBI | | | | |
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Opn1sw (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955479 | 9,573,594 - 9,576,668 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955479 | 9,573,594 - 9,576,668 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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OPN1SW (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 6 | 165,576,694 - 165,584,445 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 7 | 17,586,802 - 17,590,192 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 7 | 120,724,363 - 120,727,649 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 7 | 133,246,131 - 133,251,464 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 7 | 133,246,131 - 133,251,464 (-) | Ensembl | panpan1.1 | | panPan2 | |
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OPN1SW (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 14 | 7,865,370 - 7,869,516 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 14 | 7,865,561 - 7,868,745 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 14 | 7,552,256 - 7,555,713 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 14 | 7,631,370 - 7,634,827 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 14 | 7,630,992 - 7,634,662 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 14 | 7,836,320 - 7,839,777 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 14 | 7,578,515 - 7,581,972 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 14 | 7,723,749 - 7,727,206 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Opn1sw (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405118 | 54,572,299 - 54,578,533 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936479 | 15,699,604 - 15,702,352 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936479 | 15,696,063 - 15,702,311 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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OPN1SW (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 18 | 19,836,453 - 19,839,425 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 18 | 19,836,453 - 19,839,425 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 18 | 20,905,871 - 20,908,843 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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OPN1SW (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 21 | 97,370,824 - 97,377,433 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 21 | 97,372,863 - 97,376,406 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666042 | 6,028,013 - 6,032,554 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Opn1sw (Heterocephalus glaber - naked mole-rat) |
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