TRANK1 (tetratricopeptide repeat and ankyrin repeat containing 1) - Rat Genome Database

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Gene: TRANK1 (tetratricopeptide repeat and ankyrin repeat containing 1) Homo sapiens
Analyze
Symbol: TRANK1
Name: tetratricopeptide repeat and ankyrin repeat containing 1
RGD ID: 2937319
HGNC Page HGNC:29011
Description: Predicted to enable Hsp90 protein binding activity.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: KIAA0342; LBA1; lupus brain antigen 1 homolog; TPR and ankyrin repeat-containing protein 1
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38336,826,819 - 36,945,744 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl336,826,819 - 36,945,057 (-)EnsemblGRCh38hg38GRCh38
GRCh37336,868,310 - 36,986,545 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36336,843,315 - 36,877,415 (-)NCBINCBI36Build 36hg18NCBI36
Celera336,811,078 - 36,929,308 (-)NCBICelera
Cytogenetic Map3p22.2NCBI
HuRef336,808,964 - 36,927,088 (-)NCBIHuRef
CHM1_1336,818,551 - 36,938,172 (-)NCBICHM1_1
T2T-CHM13v2.0336,828,168 - 36,947,110 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:9205841   PMID:10737800   PMID:14702039   PMID:15146197   PMID:21282530   PMID:21926972   PMID:22182935   PMID:23092984   PMID:24280982   PMID:24618891   PMID:25056061   PMID:31586073  
PMID:32791513   PMID:33737391   PMID:34014031   PMID:34349018   PMID:34992606   PMID:35256949   PMID:36774506  


Genomics

Comparative Map Data
TRANK1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38336,826,819 - 36,945,744 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl336,826,819 - 36,945,057 (-)EnsemblGRCh38hg38GRCh38
GRCh37336,868,310 - 36,986,545 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36336,843,315 - 36,877,415 (-)NCBINCBI36Build 36hg18NCBI36
Celera336,811,078 - 36,929,308 (-)NCBICelera
Cytogenetic Map3p22.2NCBI
HuRef336,808,964 - 36,927,088 (-)NCBIHuRef
CHM1_1336,818,551 - 36,938,172 (-)NCBICHM1_1
T2T-CHM13v2.0336,828,168 - 36,947,110 (-)NCBIT2T-CHM13v2.0
Trank1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399111,140,351 - 111,224,843 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl9111,140,807 - 111,224,843 (+)EnsemblGRCm39 Ensembl
GRCm389111,311,283 - 111,395,775 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9111,311,739 - 111,395,775 (+)EnsemblGRCm38mm10GRCm38
MGSCv379111,214,243 - 111,298,279 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv369111,219,636 - 111,240,591 (+)NCBIMGSCv36mm8
Celera9111,038,156 - 111,123,540 (+)NCBICelera
Cytogenetic Map9F3NCBI
cM Map960.95NCBI
Trank1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88120,153,381 - 120,233,879 (+)NCBIGRCr8
mRatBN7.28111,275,973 - 111,355,491 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8111,276,354 - 111,355,092 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx8116,892,440 - 116,970,177 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08115,091,671 - 115,169,416 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08112,934,500 - 113,012,248 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.08119,566,509 - 119,644,249 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8119,566,509 - 119,644,249 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08118,916,156 - 118,993,803 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48115,701,554 - 115,781,013 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera8110,557,993 - 110,635,930 (+)NCBICelera
Cytogenetic Map8q32NCBI
Trank1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554213,707,510 - 3,853,868 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554213,707,510 - 3,852,886 (-)NCBIChiLan1.0ChiLan1.0
TRANK1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2236,788,485 - 36,907,530 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1336,793,249 - 36,912,330 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0336,732,939 - 36,852,023 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1337,023,455 - 37,141,982 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl337,024,909 - 37,102,299 (-)Ensemblpanpan1.1panPan2
TRANK1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1236,749,817 - 6,849,113 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl236,631,276 - 6,849,034 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha236,789,473 - 6,869,908 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0237,034,999 - 7,115,474 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl236,946,464 - 7,134,352 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1236,854,618 - 6,935,467 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0236,997,235 - 7,077,671 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0236,987,132 - 7,067,610 (-)NCBIUU_Cfam_GSD_1.0
Trank1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118193,265,171 - 193,365,150 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647326,403,681 - 26,482,721 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647326,403,786 - 26,481,284 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TRANK1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1321,938,966 - 22,023,156 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11321,913,400 - 22,023,165 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21323,906,064 - 23,912,672 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TRANK1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1152,464,289 - 2,583,314 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl152,502,023 - 2,581,141 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606311,201,749 - 11,319,415 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Trank1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462478814,922,497 - 15,065,624 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462478814,926,685 - 15,035,745 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in TRANK1
170 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 3p22.3-22.2(chr3:33062199-36829440)x1 copy number loss See cases [RCV000051510] Chr3:33062199..36829440 [GRCh38]
Chr3:33103691..36870931 [GRCh37]
Chr3:33078695..36845935 [NCBI36]
Chr3:3p22.3-22.2		 pathogenic
GRCh38/hg38 3p26.3-22.2(chr3:52266-37148076)x3 copy number gain See cases [RCV000051097] Chr3:52266..37148076 [GRCh38]
Chr3:93949..37189567 [GRCh37]
Chr3:68949..37164571 [NCBI36]
Chr3:3p26.3-22.2		 pathogenic
GRCh38/hg38 3p25.3-22.2(chr3:11463328-38919543)x3 copy number gain See cases [RCV000051720] Chr3:11463328..38919543 [GRCh38]
Chr3:11504802..38961034 [GRCh37]
Chr3:11479802..38936038 [NCBI36]
Chr3:3p25.3-22.2		 pathogenic
NM_014831.2(TRANK1):c.8323G>A (p.Glu2775Lys) single nucleotide variant Malignant melanoma [RCV000066017] Chr3:36831128 [GRCh38]
Chr3:36872619 [GRCh37]
Chr3:36847623 [NCBI36]
Chr3:3p22.2		 not provided
NM_014831.2(TRANK1):c.7802A>G (p.Asp2601Gly) single nucleotide variant Malignant melanoma [RCV000066018] Chr3:36831649 [GRCh38]
Chr3:36873140 [GRCh37]
Chr3:36848144 [NCBI36]
Chr3:3p22.2		 not provided
NM_014831.2(TRANK1):c.7535C>T (p.Ser2512Leu) single nucleotide variant Malignant melanoma [RCV000066019] Chr3:36831916 [GRCh38]
Chr3:36873407 [GRCh37]
Chr3:36848411 [NCBI36]
Chr3:3p22.2		 not provided
NM_014831.2(TRANK1):c.6613G>A (p.Glu2205Lys) single nucleotide variant Malignant melanoma [RCV000066020] Chr3:36832838 [GRCh38]
Chr3:36874329 [GRCh37]
Chr3:36849333 [NCBI36]
Chr3:3p22.2		 not provided
NM_014831.2(TRANK1):c.5013C>T (p.Phe1671=) single nucleotide variant Malignant melanoma [RCV000066021] Chr3:36846294 [GRCh38]
Chr3:36887785 [GRCh37]
Chr3:36862789 [NCBI36]
Chr3:3p22.2		 not provided
NM_001329998.2(TRANK1):c.2833G>A (p.Val945Ile) single nucleotide variant Autism spectrum disorder [RCV001291338] Chr3:36856889 [GRCh38]
Chr3:36898380 [GRCh37]
Chr3:3p22.2		 association
NM_001329998.2(TRANK1):c.6458C>A (p.Thr2153Lys) single nucleotide variant Autism spectrum disorder [RCV001291339] Chr3:36833125 [GRCh38]
Chr3:36874616 [GRCh37]
Chr3:3p22.2		 association
NM_000249.3(MLH1):c.-54519_1731+2263del deletion Lynch syndrome [RCV000075065] Chr3:36939029..37044594 [GRCh38]
Chr3:36980520..37086085 [GRCh37]
Chr3:3p22.2		 pathogenic
GRCh38/hg38 3p22.3-22.1(chr3:33728406-40662451)x3 copy number gain See cases [RCV000134924] Chr3:33728406..40662451 [GRCh38]
Chr3:33769898..40703942 [GRCh37]
Chr3:33744902..40678946 [NCBI36]
Chr3:3p22.3-22.1		 pathogenic
GRCh38/hg38 3p26.3-22.1(chr3:53308-41381521)x3 copy number gain See cases [RCV000141810] Chr3:53308..41381521 [GRCh38]
Chr3:94991..41423012 [GRCh37]
Chr3:69991..41398016 [NCBI36]
Chr3:3p26.3-22.1		 pathogenic
GRCh38/hg38 3p22.2(chr3:36828515-37007227)x1 copy number loss See cases [RCV000142863] Chr3:36828515..37007227 [GRCh38]
Chr3:36870006..37048718 [GRCh37]
Chr3:36845010..37023722 [NCBI36]
Chr3:3p22.2		 pathogenic
GRCh38/hg38 3p22.2(chr3:36935294-37058124)x3 copy number gain See cases [RCV000142758] Chr3:36935294..37058124 [GRCh38]
Chr3:36976785..37099615 [GRCh37]
Chr3:36951789..37074619 [NCBI36]
Chr3:3p22.2		 benign
GRCh37/hg19 3p22.2(chr3:36948416-37016154)x1 copy number loss See cases [RCV000447421] Chr3:36948416..37016154 [GRCh37]
Chr3:3p22.2		 uncertain significance
GRCh37/hg19 3p26.3-22.2(chr3:61891-37459464)x3 copy number gain See cases [RCV000511463] Chr3:61891..37459464 [GRCh37]
Chr3:3p26.3-22.2		 pathogenic
NM_001329998.2(TRANK1):c.6164C>A (p.Thr2055Lys) single nucleotide variant not specified [RCV004296029] Chr3:36833419 [GRCh38]
Chr3:36874910 [GRCh37]
Chr3:3p22.2		 uncertain significance
GRCh37/hg19 3p26.3-q29(chr3:61892-197851986) copy number gain See cases [RCV000512358] Chr3:61892..197851986 [GRCh37]
Chr3:3p26.3-q29		 pathogenic
NM_001329998.2(TRANK1):c.4273A>G (p.Arg1425Gly) single nucleotide variant not specified [RCV004287564] Chr3:36855449 [GRCh38]
Chr3:36896940 [GRCh37]
Chr3:3p22.2		 uncertain significance
GRCh37/hg19 3p26.3-q29(chr3:61892-197851986)x3 copy number gain See cases [RCV000511055] Chr3:61892..197851986 [GRCh37]
Chr3:3p26.3-q29		 pathogenic
NM_001329998.2(TRANK1):c.676G>A (p.Val226Met) single nucleotide variant not specified [RCV004314341] Chr3:36892301 [GRCh38]
Chr3:36933792 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.4430G>A (p.Arg1477His) single nucleotide variant not specified [RCV004305100] Chr3:36855292 [GRCh38]
Chr3:36896783 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.7781C>T (p.Ser2594Leu) single nucleotide variant not specified [RCV004289199] Chr3:36831802 [GRCh38]
Chr3:36873293 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.2966A>G (p.Gln989Arg) single nucleotide variant not specified [RCV004316752] Chr3:36856756 [GRCh38]
Chr3:36898247 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.6475A>G (p.Ile2159Val) single nucleotide variant not specified [RCV004333064] Chr3:36833108 [GRCh38]
Chr3:36874599 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.2257T>G (p.Cys753Gly) single nucleotide variant not specified [RCV004310476] Chr3:36857465 [GRCh38]
Chr3:36898956 [GRCh37]
Chr3:3p22.2		 uncertain significance
GRCh37/hg19 3p24.3-21.31(chr3:16923595-45249923)x2,3 copy number gain not provided [RCV000682249] Chr3:16923595..45249923 [GRCh37]
Chr3:3p24.3-21.31		 pathogenic
GRCh37/hg19 3p26.3-q29(chr3:61495-197838262)x3 copy number gain not provided [RCV000742138] Chr3:61495..197838262 [GRCh37]
Chr3:3p26.3-q29		 pathogenic
GRCh37/hg19 3p26.3-q29(chr3:60174-197948027)x3 copy number gain not provided [RCV000742133] Chr3:60174..197948027 [GRCh37]
Chr3:3p26.3-q29		 pathogenic
NM_001329998.2(TRANK1):c.3308A>C (p.Gln1103Pro) single nucleotide variant not specified [RCV004299531] Chr3:36856414 [GRCh38]
Chr3:36897905 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.2981G>A (p.Arg994His) single nucleotide variant not specified [RCV004299627] Chr3:36856741 [GRCh38]
Chr3:36898232 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.3959A>G (p.Tyr1320Cys) single nucleotide variant not specified [RCV004288909] Chr3:36855763 [GRCh38]
Chr3:36897254 [GRCh37]
Chr3:3p22.2		 uncertain significance
GRCh37/hg19 3p22.2(chr3:36948416-37788630)x3 copy number gain not provided [RCV001005424] Chr3:36948416..37788630 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.4700T>C (p.Leu1567Pro) single nucleotide variant not specified [RCV004308362] Chr3:36852195 [GRCh38]
Chr3:36893686 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.5003G>A (p.Arg1668Gln) single nucleotide variant not specified [RCV004109003] Chr3:36847231 [GRCh38]
Chr3:36888722 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.908-2950_1078+1838del deletion not provided [RCV002227665] Chr3:36872288..36877246 [GRCh38]
Chr3:36913779..36918737 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.650T>C (p.Ile217Thr) single nucleotide variant not specified [RCV004308330] Chr3:36892327 [GRCh38]
Chr3:36933818 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.6102C>T (p.Phe2034=) single nucleotide variant not provided [RCV001816341] Chr3:36833481 [GRCh38]
Chr3:36874972 [GRCh37]
Chr3:3p22.2		 likely benign
NC_000003.11:g.(?_16710965)_(41275270_?)del deletion not provided [RCV001958625] Chr3:16710965..41275270 [GRCh37]
Chr3:3p24.3-22.1		 pathogenic
NM_001329998.2(TRANK1):c.4559A>G (p.Asn1520Ser) single nucleotide variant not specified [RCV004294195] Chr3:36852336 [GRCh38]
Chr3:36893827 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.2352T>G (p.Ser784Arg) single nucleotide variant not specified [RCV004302866] Chr3:36857370 [GRCh38]
Chr3:36898861 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.4565C>T (p.Ala1522Val) single nucleotide variant not specified [RCV004161796] Chr3:36852330 [GRCh38]
Chr3:36893821 [GRCh37]
Chr3:3p22.2		 uncertain significance
GRCh37/hg19 3p22.2(chr3:36948417-37028790)x1 copy number loss not provided [RCV002473611] Chr3:36948417..37028790 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.5795C>T (p.Ser1932Leu) single nucleotide variant not specified [RCV004236063] Chr3:36833788 [GRCh38]
Chr3:36875279 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.8333G>A (p.Arg2778His) single nucleotide variant not specified [RCV004188826] Chr3:36831250 [GRCh38]
Chr3:36872741 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.628C>T (p.Leu210Phe) single nucleotide variant not specified [RCV004081287] Chr3:36892909 [GRCh38]
Chr3:36934400 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.3931C>A (p.Arg1311Ser) single nucleotide variant not specified [RCV004225637] Chr3:36855791 [GRCh38]
Chr3:36897282 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.8158C>A (p.Gln2720Lys) single nucleotide variant not specified [RCV004090959] Chr3:36831425 [GRCh38]
Chr3:36872916 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.4472A>G (p.Asn1491Ser) single nucleotide variant not specified [RCV004209345] Chr3:36855250 [GRCh38]
Chr3:36896741 [GRCh37]
Chr3:3p22.2		 likely benign
NM_001329998.2(TRANK1):c.7355C>T (p.Thr2452Ile) single nucleotide variant not specified [RCV004140712] Chr3:36832228 [GRCh38]
Chr3:36873719 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.3617A>T (p.Gln1206Leu) single nucleotide variant not specified [RCV004195404] Chr3:36856105 [GRCh38]
Chr3:36897596 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.7682G>A (p.Arg2561Gln) single nucleotide variant not specified [RCV004217866] Chr3:36831901 [GRCh38]
Chr3:36873392 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.8762A>C (p.Asp2921Ala) single nucleotide variant not specified [RCV004139258] Chr3:36829611 [GRCh38]
Chr3:36871102 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.416T>G (p.Val139Gly) single nucleotide variant not specified [RCV004226467] Chr3:36899126 [GRCh38]
Chr3:36940617 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.7975A>G (p.Ile2659Val) single nucleotide variant not specified [RCV004100357] Chr3:36831608 [GRCh38]
Chr3:36873099 [GRCh37]
Chr3:3p22.2		 likely benign
NM_001329998.2(TRANK1):c.6902G>A (p.Arg2301Gln) single nucleotide variant not specified [RCV004241954] Chr3:36832681 [GRCh38]
Chr3:36874172 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.3616C>G (p.Gln1206Glu) single nucleotide variant not specified [RCV004100869] Chr3:36856106 [GRCh38]
Chr3:36897597 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.2798G>A (p.Arg933Gln) single nucleotide variant not specified [RCV004084440] Chr3:36856924 [GRCh38]
Chr3:36898415 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.7302G>A (p.Met2434Ile) single nucleotide variant not specified [RCV004113779] Chr3:36832281 [GRCh38]
Chr3:36873772 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.7197G>A (p.Met2399Ile) single nucleotide variant not specified [RCV004108534] Chr3:36832386 [GRCh38]
Chr3:36873877 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.277G>A (p.Val93Met) single nucleotide variant not specified [RCV004129831] Chr3:36903154 [GRCh38]
Chr3:36944645 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.5782A>G (p.Met1928Val) single nucleotide variant not specified [RCV004182548] Chr3:36833801 [GRCh38]
Chr3:36875292 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.8527G>A (p.Glu2843Lys) single nucleotide variant not specified [RCV004198206] Chr3:36831056 [GRCh38]
Chr3:36872547 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.2890C>T (p.Arg964Trp) single nucleotide variant not specified [RCV004151762] Chr3:36856832 [GRCh38]
Chr3:36898323 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.3283C>T (p.His1095Tyr) single nucleotide variant not specified [RCV004231319] Chr3:36856439 [GRCh38]
Chr3:36897930 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.4703G>A (p.Arg1568Gln) single nucleotide variant not specified [RCV004223067] Chr3:36852192 [GRCh38]
Chr3:36893683 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.2115C>G (p.Asp705Glu) single nucleotide variant not specified [RCV004141286] Chr3:36857607 [GRCh38]
Chr3:36899098 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.7568G>A (p.Arg2523Gln) single nucleotide variant not specified [RCV004212762] Chr3:36832015 [GRCh38]
Chr3:36873506 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.4801G>C (p.Gly1601Arg) single nucleotide variant not specified [RCV004106530] Chr3:36851805 [GRCh38]
Chr3:36893296 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.2567A>G (p.Lys856Arg) single nucleotide variant not specified [RCV004145763] Chr3:36857155 [GRCh38]
Chr3:36898646 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.3932G>A (p.Arg1311His) single nucleotide variant not specified [RCV004141721] Chr3:36855790 [GRCh38]
Chr3:36897281 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.6164C>T (p.Thr2055Met) single nucleotide variant not specified [RCV004211791] Chr3:36833419 [GRCh38]
Chr3:36874910 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.7223G>A (p.Arg2408Gln) single nucleotide variant not specified [RCV004074299] Chr3:36832360 [GRCh38]
Chr3:36873851 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.8803A>G (p.Lys2935Glu) single nucleotide variant not specified [RCV004131932] Chr3:36829570 [GRCh38]
Chr3:36871061 [GRCh37]
Chr3:3p22.2		 likely benign
NM_001329998.2(TRANK1):c.1504G>T (p.Asp502Tyr) single nucleotide variant not specified [RCV004189379] Chr3:36858886 [GRCh38]
Chr3:36900377 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.893G>C (p.Gly298Ala) single nucleotide variant not specified [RCV004234442] Chr3:36889843 [GRCh38]
Chr3:36931334 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.5549G>A (p.Ser1850Asn) single nucleotide variant not specified [RCV004210083] Chr3:36834876 [GRCh38]
Chr3:36876367 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.4877C>T (p.Thr1626Ile) single nucleotide variant not specified [RCV004090885] Chr3:36851729 [GRCh38]
Chr3:36893220 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.8533G>T (p.Val2845Leu) single nucleotide variant not specified [RCV004197388] Chr3:36831050 [GRCh38]
Chr3:36872541 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.1819G>A (p.Val607Met) single nucleotide variant not specified [RCV004120831] Chr3:36857903 [GRCh38]
Chr3:36899394 [GRCh37]
Chr3:3p22.2		 likely benign
NM_001329998.2(TRANK1):c.6958G>T (p.Ala2320Ser) single nucleotide variant not specified [RCV004161941] Chr3:36832625 [GRCh38]
Chr3:36874116 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.976C>T (p.Arg326Trp) single nucleotide variant not specified [RCV004178255] Chr3:36874228 [GRCh38]
Chr3:36915719 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.5125G>T (p.Ala1709Ser) single nucleotide variant not specified [RCV004148584] Chr3:36846314 [GRCh38]
Chr3:36887805 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.2456C>T (p.Thr819Met) single nucleotide variant not specified [RCV004085193] Chr3:36857266 [GRCh38]
Chr3:36898757 [GRCh37]
Chr3:3p22.2		 likely benign
NM_001329998.2(TRANK1):c.7580C>G (p.Ser2527Cys) single nucleotide variant not specified [RCV004186692] Chr3:36832003 [GRCh38]
Chr3:36873494 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.937C>A (p.Arg313Ser) single nucleotide variant not specified [RCV004208790] Chr3:36874267 [GRCh38]
Chr3:36915758 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.1651C>T (p.His551Tyr) single nucleotide variant not specified [RCV004100319] Chr3:36858739 [GRCh38]
Chr3:36900230 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.3083A>T (p.Lys1028Met) single nucleotide variant not specified [RCV004140802] Chr3:36856639 [GRCh38]
Chr3:36898130 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.5743G>T (p.Ala1915Ser) single nucleotide variant not specified [RCV004120393] Chr3:36833840 [GRCh38]
Chr3:36875331 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.7861G>T (p.Ala2621Ser) single nucleotide variant not specified [RCV004145540] Chr3:36831722 [GRCh38]
Chr3:36873213 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.3313G>A (p.Gly1105Arg) single nucleotide variant not specified [RCV004172724] Chr3:36856409 [GRCh38]
Chr3:36897900 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.3056C>T (p.Ala1019Val) single nucleotide variant not specified [RCV004243871] Chr3:36856666 [GRCh38]
Chr3:36898157 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.5807T>A (p.Ile1936Lys) single nucleotide variant not specified [RCV004164559] Chr3:36833776 [GRCh38]
Chr3:36875267 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.724A>G (p.Thr242Ala) single nucleotide variant not specified [RCV004126916] Chr3:36892253 [GRCh38]
Chr3:36933744 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.6073C>G (p.Gln2025Glu) single nucleotide variant not specified [RCV004185635] Chr3:36833510 [GRCh38]
Chr3:36875001 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.2633G>A (p.Arg878Gln) single nucleotide variant not specified [RCV004245409] Chr3:36857089 [GRCh38]
Chr3:36898580 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.341G>A (p.Arg114His) single nucleotide variant not specified [RCV004240886] Chr3:36899201 [GRCh38]
Chr3:36940692 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.6089C>T (p.Ala2030Val) single nucleotide variant not specified [RCV004175919] Chr3:36833494 [GRCh38]
Chr3:36874985 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.5989C>T (p.Arg1997Cys) single nucleotide variant not specified [RCV004159458] Chr3:36833594 [GRCh38]
Chr3:36875085 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.1168C>T (p.Arg390Trp) single nucleotide variant not specified [RCV004076035] Chr3:36864391 [GRCh38]
Chr3:36905882 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.2819G>A (p.Arg940Gln) single nucleotide variant not specified [RCV004170381] Chr3:36856903 [GRCh38]
Chr3:36898394 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.812A>G (p.Lys271Arg) single nucleotide variant not specified [RCV004221053] Chr3:36889924 [GRCh38]
Chr3:36931415 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.2204A>G (p.Asp735Gly) single nucleotide variant not specified [RCV004227789] Chr3:36857518 [GRCh38]
Chr3:36899009 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.937C>T (p.Arg313Cys) single nucleotide variant not specified [RCV004201993] Chr3:36874267 [GRCh38]
Chr3:36915758 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.7255G>A (p.Val2419Met) single nucleotide variant not specified [RCV004221831] Chr3:36832328 [GRCh38]
Chr3:36873819 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.2134G>A (p.Gly712Ser) single nucleotide variant not specified [RCV004150892] Chr3:36857588 [GRCh38]
Chr3:36899079 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.7417A>C (p.Asn2473His) single nucleotide variant not specified [RCV004244041] Chr3:36832166 [GRCh38]
Chr3:36873657 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.8157A>G (p.Ile2719Met) single nucleotide variant not specified [RCV004090958] Chr3:36831426 [GRCh38]
Chr3:36872917 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.2942A>C (p.Gln981Pro) single nucleotide variant not specified [RCV004201079] Chr3:36856780 [GRCh38]
Chr3:36898271 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.901G>A (p.Val301Ile) single nucleotide variant not specified [RCV004201555] Chr3:36889835 [GRCh38]
Chr3:36931326 [GRCh37]
Chr3:3p22.2		 likely benign
NM_001329998.2(TRANK1):c.7471T>C (p.Phe2491Leu) single nucleotide variant not specified [RCV004124773] Chr3:36832112 [GRCh38]
Chr3:36873603 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.1799A>G (p.Gln600Arg) single nucleotide variant not specified [RCV004178850] Chr3:36857923 [GRCh38]
Chr3:36899414 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.1678A>G (p.Ile560Val) single nucleotide variant not specified [RCV004153136] Chr3:36858044 [GRCh38]
Chr3:36899535 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.2971C>T (p.Arg991Cys) single nucleotide variant not specified [RCV004209077] Chr3:36856751 [GRCh38]
Chr3:36898242 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.6583T>G (p.Phe2195Val) single nucleotide variant not specified [RCV004188947] Chr3:36833000 [GRCh38]
Chr3:36874491 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.5243C>T (p.Ala1748Val) single nucleotide variant not specified [RCV004165050] Chr3:36842659 [GRCh38]
Chr3:36884150 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.538A>G (p.Lys180Glu) single nucleotide variant not specified [RCV004171870] Chr3:36895654 [GRCh38]
Chr3:36937145 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.7982G>A (p.Arg2661His) single nucleotide variant not provided [RCV003883938]|not specified [RCV004219284] Chr3:36831601 [GRCh38]
Chr3:36873092 [GRCh37]
Chr3:3p22.2		 likely benign|uncertain significance
NM_001329998.2(TRANK1):c.5347A>G (p.Thr1783Ala) single nucleotide variant not specified [RCV004180420] Chr3:36838650 [GRCh38]
Chr3:36880141 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.3839A>G (p.Gln1280Arg) single nucleotide variant not specified [RCV004069614] Chr3:36855883 [GRCh38]
Chr3:36897374 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.7122G>C (p.Arg2374Ser) single nucleotide variant not specified [RCV004154720] Chr3:36832461 [GRCh38]
Chr3:36873952 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.2774C>T (p.Thr925Met) single nucleotide variant not specified [RCV004144578] Chr3:36856948 [GRCh38]
Chr3:36898439 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.3164G>C (p.Gly1055Ala) single nucleotide variant not specified [RCV004174798] Chr3:36856558 [GRCh38]
Chr3:36898049 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.3488G>A (p.Gly1163Glu) single nucleotide variant not specified [RCV004165895] Chr3:36856234 [GRCh38]
Chr3:36897725 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.1619C>T (p.Thr540Met) single nucleotide variant not specified [RCV004180418] Chr3:36858771 [GRCh38]
Chr3:36900262 [GRCh37]
Chr3:3p22.2		 likely benign
NM_001329998.2(TRANK1):c.4336G>A (p.Glu1446Lys) single nucleotide variant not specified [RCV004074496] Chr3:36855386 [GRCh38]
Chr3:36896877 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.1805G>T (p.Gly602Val) single nucleotide variant not specified [RCV004094313] Chr3:36857917 [GRCh38]
Chr3:36899408 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.8195T>C (p.Leu2732Pro) single nucleotide variant not specified [RCV004077781] Chr3:36831388 [GRCh38]
Chr3:36872879 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.7981C>T (p.Arg2661Cys) single nucleotide variant not specified [RCV004105555] Chr3:36831602 [GRCh38]
Chr3:36873093 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.7129G>A (p.Gly2377Ser) single nucleotide variant not specified [RCV004174115] Chr3:36832454 [GRCh38]
Chr3:36873945 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.885C>G (p.His295Gln) single nucleotide variant not specified [RCV004311960] Chr3:36889851 [GRCh38]
Chr3:36931342 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.5443A>G (p.Thr1815Ala) single nucleotide variant not specified [RCV004314852] Chr3:36838446 [GRCh38]
Chr3:36879937 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.2762C>T (p.Thr921Met) single nucleotide variant not specified [RCV004262647] Chr3:36856960 [GRCh38]
Chr3:36898451 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.8001G>C (p.Glu2667Asp) single nucleotide variant not specified [RCV004263208] Chr3:36831582 [GRCh38]
Chr3:36873073 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.6671C>T (p.Ser2224Leu) single nucleotide variant not specified [RCV004273800] Chr3:36832912 [GRCh38]
Chr3:36874403 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.535A>G (p.Lys179Glu) single nucleotide variant not specified [RCV004268762] Chr3:36895657 [GRCh38]
Chr3:36937148 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.4166G>A (p.Ser1389Asn) single nucleotide variant not specified [RCV004267688] Chr3:36855556 [GRCh38]
Chr3:36897047 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.490G>A (p.Gly164Arg) single nucleotide variant not specified [RCV004262809] Chr3:36895702 [GRCh38]
Chr3:36937193 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.7522C>A (p.Gln2508Lys) single nucleotide variant not specified [RCV004272807] Chr3:36832061 [GRCh38]
Chr3:36873552 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.4162C>T (p.Arg1388Trp) single nucleotide variant not specified [RCV004251534] Chr3:36855560 [GRCh38]
Chr3:36897051 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.1817G>A (p.Arg606His) single nucleotide variant not specified [RCV004262705] Chr3:36857905 [GRCh38]
Chr3:36899396 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.1604G>A (p.Arg535His) single nucleotide variant not specified [RCV004278965] Chr3:36858786 [GRCh38]
Chr3:36900277 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.4615C>T (p.Arg1539Cys) single nucleotide variant not specified [RCV004276541] Chr3:36852280 [GRCh38]
Chr3:36893771 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.6782T>C (p.Met2261Thr) single nucleotide variant not specified [RCV004251057] Chr3:36832801 [GRCh38]
Chr3:36874292 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.7222C>T (p.Arg2408Trp) single nucleotide variant not specified [RCV004330715] Chr3:36832361 [GRCh38]
Chr3:36873852 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.8014C>T (p.Arg2672Cys) single nucleotide variant not specified [RCV004280440] Chr3:36831569 [GRCh38]
Chr3:36873060 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.5044G>A (p.Gly1682Arg) single nucleotide variant not specified [RCV004257381] Chr3:36846395 [GRCh38]
Chr3:36887886 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.2468A>G (p.Glu823Gly) single nucleotide variant not specified [RCV004275417] Chr3:36857254 [GRCh38]
Chr3:36898745 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.6961C>T (p.Arg2321Cys) single nucleotide variant not specified [RCV004251620] Chr3:36832622 [GRCh38]
Chr3:36874113 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.1204G>A (p.Val402Ile) single nucleotide variant not specified [RCV004268112] Chr3:36864355 [GRCh38]
Chr3:36905846 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.8445C>G (p.Ser2815Arg) single nucleotide variant not specified [RCV004267124] Chr3:36831138 [GRCh38]
Chr3:36872629 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.3608A>G (p.Gln1203Arg) single nucleotide variant not specified [RCV004327442] Chr3:36856114 [GRCh38]
Chr3:36897605 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.1764C>G (p.Asp588Glu) single nucleotide variant not specified [RCV004324244] Chr3:36857958 [GRCh38]
Chr3:36899449 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.8748C>G (p.Ile2916Met) single nucleotide variant not specified [RCV004326264] Chr3:36829625 [GRCh38]
Chr3:36871116 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.6697G>A (p.Gly2233Arg) single nucleotide variant not specified [RCV004299882] Chr3:36832886 [GRCh38]
Chr3:36874377 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.1088A>G (p.Asn363Ser) single nucleotide variant Autism [RCV003328501] Chr3:36864471 [GRCh38]
Chr3:36905962 [GRCh37]
Chr3:3p22.2		 likely benign
NM_001329998.2(TRANK1):c.818A>G (p.Glu273Gly) single nucleotide variant Autism [RCV003328508] Chr3:36889918 [GRCh38]
Chr3:36931409 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.4444C>T (p.Arg1482Cys) single nucleotide variant not specified [RCV004337793] Chr3:36855278 [GRCh38]
Chr3:36896769 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.3533T>C (p.Val1178Ala) single nucleotide variant not specified [RCV004346651] Chr3:36856189 [GRCh38]
Chr3:36897680 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.3100A>G (p.Thr1034Ala) single nucleotide variant not specified [RCV004351908] Chr3:36856622 [GRCh38]
Chr3:36898113 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.8032C>G (p.Pro2678Ala) single nucleotide variant not specified [RCV004346415] Chr3:36831551 [GRCh38]
Chr3:36873042 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.8881C>G (p.Arg2961Gly) single nucleotide variant not specified [RCV004352571] Chr3:36828304 [GRCh38]
Chr3:36869795 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.229G>A (p.Glu77Lys) single nucleotide variant not specified [RCV004340702] Chr3:36903202 [GRCh38]
Chr3:36944693 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.6935A>T (p.His2312Leu) single nucleotide variant not specified [RCV004346850] Chr3:36832648 [GRCh38]
Chr3:36874139 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.4774G>A (p.Ala1592Thr) single nucleotide variant not specified [RCV004354323] Chr3:36851832 [GRCh38]
Chr3:36893323 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.6643C>T (p.Arg2215Cys) single nucleotide variant not specified [RCV004365272] Chr3:36832940 [GRCh38]
Chr3:36874431 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.5950G>A (p.Asp1984Asn) single nucleotide variant not specified [RCV004364022] Chr3:36833633 [GRCh38]
Chr3:36875124 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.6764A>G (p.Tyr2255Cys) single nucleotide variant not specified [RCV004341182] Chr3:36832819 [GRCh38]
Chr3:36874310 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.6500C>A (p.Ala2167Asp) single nucleotide variant not specified [RCV004338721] Chr3:36833083 [GRCh38]
Chr3:36874574 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.4668G>A (p.Glu1556=) single nucleotide variant not provided [RCV003437750] Chr3:36852227 [GRCh38]
Chr3:36893718 [GRCh37]
Chr3:3p22.2		 likely benign
NM_001329998.2(TRANK1):c.3726G>A (p.Leu1242=) single nucleotide variant not provided [RCV003433514] Chr3:36855996 [GRCh38]
Chr3:36897487 [GRCh37]
Chr3:3p22.2		 likely benign
NM_001329998.2(TRANK1):c.7569G>C (p.Arg2523=) single nucleotide variant not provided [RCV003433513] Chr3:36832014 [GRCh38]
Chr3:36873505 [GRCh37]
Chr3:3p22.2		 likely benign
NM_001329998.2(TRANK1):c.855C>T (p.Gly285=) single nucleotide variant not provided [RCV003437751] Chr3:36889881 [GRCh38]
Chr3:36931372 [GRCh37]
Chr3:3p22.2		 likely benign
GRCh37/hg19 3p22.3-22.2(chr3:35970901-37455657)x3 copy number gain not specified [RCV003986423] Chr3:35970901..37455657 [GRCh37]
Chr3:3p22.3-22.2		 uncertain significance
GRCh37/hg19 3p22.3-22.2(chr3:35969734-37443324)x3 copy number gain not specified [RCV003986476] Chr3:35969734..37443324 [GRCh37]
Chr3:3p22.3-22.2		 uncertain significance
NM_001329998.2(TRANK1):c.6789C>G (p.Gly2263=) single nucleotide variant not provided [RCV003885650] Chr3:36832794 [GRCh38]
Chr3:36874285 [GRCh37]
Chr3:3p22.2		 likely benign
NM_001329998.2(TRANK1):c.2290G>A (p.Ala764Thr) single nucleotide variant not specified [RCV004471217] Chr3:36857432 [GRCh38]
Chr3:36898923 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.2713A>G (p.Ile905Val) single nucleotide variant not specified [RCV004471222] Chr3:36857009 [GRCh38]
Chr3:36898500 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.4255C>T (p.Arg1419Trp) single nucleotide variant not specified [RCV004471230] Chr3:36855467 [GRCh38]
Chr3:36896958 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.6962G>C (p.Arg2321Pro) single nucleotide variant not specified [RCV004471246] Chr3:36832621 [GRCh38]
Chr3:36874112 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.938G>A (p.Arg313His) single nucleotide variant not specified [RCV004471257] Chr3:36874266 [GRCh38]
Chr3:36915757 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.8255G>C (p.Arg2752Thr) single nucleotide variant not specified [RCV004471258] Chr3:36831328 [GRCh38]
Chr3:36872819 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.8890G>C (p.Gly2964Arg) single nucleotide variant not specified [RCV004471261] Chr3:36828295 [GRCh38]
Chr3:36869786 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.1114G>A (p.Asp372Asn) single nucleotide variant not specified [RCV004471262] Chr3:36864445 [GRCh38]
Chr3:36905936 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.1219C>T (p.Arg407Cys) single nucleotide variant not specified [RCV004471207] Chr3:36864340 [GRCh38]
Chr3:36905831 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.1349G>A (p.Arg450His) single nucleotide variant not specified [RCV004471208] Chr3:36861052 [GRCh38]
Chr3:36902543 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.1985C>T (p.Ala662Val) single nucleotide variant not specified [RCV004471212] Chr3:36857737 [GRCh38]
Chr3:36899228 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.2417G>A (p.Arg806Lys) single nucleotide variant not specified [RCV004471219] Chr3:36857305 [GRCh38]
Chr3:36898796 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.2633G>T (p.Arg878Leu) single nucleotide variant not specified [RCV004471220] Chr3:36857089 [GRCh38]
Chr3:36898580 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.2654G>A (p.Ser885Asn) single nucleotide variant not specified [RCV004471221] Chr3:36857068 [GRCh38]
Chr3:36898559 [GRCh37]
Chr3:3p22.2		 likely benign
NM_001329998.2(TRANK1):c.2863A>T (p.Ile955Phe) single nucleotide variant not specified [RCV004471224] Chr3:36856859 [GRCh38]
Chr3:36898350 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.3110C>G (p.Ala1037Gly) single nucleotide variant not specified [RCV004471225] Chr3:36856612 [GRCh38]
Chr3:36898103 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.4315A>T (p.Ile1439Phe) single nucleotide variant not specified [RCV004471231] Chr3:36855407 [GRCh38]
Chr3:36896898 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.4711A>G (p.Lys1571Glu) single nucleotide variant not specified [RCV004471235] Chr3:36852184 [GRCh38]
Chr3:36893675 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.4930T>A (p.Ser1644Thr) single nucleotide variant not specified [RCV004471236] Chr3:36847304 [GRCh38]
Chr3:36888795 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.643G>A (p.Val215Ile) single nucleotide variant not specified [RCV004471237] Chr3:36892334 [GRCh38]
Chr3:36933825 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.5566G>A (p.Ala1856Thr) single nucleotide variant not specified [RCV004471240] Chr3:36834859 [GRCh38]
Chr3:36876350 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.2155G>A (p.Glu719Lys) single nucleotide variant not specified [RCV004471214] Chr3:36857567 [GRCh38]
Chr3:36899058 [GRCh37]
Chr3:3p22.2		 likely benign
NM_001329998.2(TRANK1):c.2410G>T (p.Asp804Tyr) single nucleotide variant not specified [RCV004471218] Chr3:36857312 [GRCh38]
Chr3:36898803 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.3414C>G (p.Asp1138Glu) single nucleotide variant not specified [RCV004471227] Chr3:36856308 [GRCh38]
Chr3:36897799 [GRCh37]
Chr3:3p22.2		 likely benign
NM_001329998.2(TRANK1):c.4486C>G (p.Gln1496Glu) single nucleotide variant not specified [RCV004471232] Chr3:36855236 [GRCh38]
Chr3:36896727 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.7031C>T (p.Pro2344Leu) single nucleotide variant not specified [RCV004471248] Chr3:36832552 [GRCh38]
Chr3:36874043 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.7877C>G (p.Ser2626Cys) single nucleotide variant not specified [RCV004471254] Chr3:36831706 [GRCh38]
Chr3:36873197 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.7760G>A (p.Arg2587His) single nucleotide variant not specified [RCV004471251] Chr3:36831823 [GRCh38]
Chr3:36873314 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.1394A>C (p.Asp465Ala) single nucleotide variant not specified [RCV004471209] Chr3:36861007 [GRCh38]
Chr3:36902498 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.1444A>C (p.Thr482Pro) single nucleotide variant not specified [RCV004471210] Chr3:36860957 [GRCh38]
Chr3:36902448 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.2177G>A (p.Cys726Tyr) single nucleotide variant not specified [RCV004471215] Chr3:36857545 [GRCh38]
Chr3:36899036 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.2270C>G (p.Ser757Cys) single nucleotide variant not specified [RCV004471216] Chr3:36857452 [GRCh38]
Chr3:36898943 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.2797C>T (p.Arg933Trp) single nucleotide variant not specified [RCV004471223] Chr3:36856925 [GRCh38]
Chr3:36898416 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.3370G>A (p.Gly1124Arg) single nucleotide variant not specified [RCV004471226] Chr3:36856352 [GRCh38]
Chr3:36897843 [GRCh37]
Chr3:3p22.2		 likely benign
NM_001329998.2(TRANK1):c.3948C>A (p.Asp1316Glu) single nucleotide variant not specified [RCV004471228] Chr3:36855774 [GRCh38]
Chr3:36897265 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.4223T>C (p.Phe1408Ser) single nucleotide variant not specified [RCV004471229] Chr3:36855499 [GRCh38]
Chr3:36896990 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.4616G>A (p.Arg1539His) single nucleotide variant not specified [RCV004471233] Chr3:36852279 [GRCh38]
Chr3:36893770 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.4676G>A (p.Ser1559Asn) single nucleotide variant not specified [RCV004471234] Chr3:36852219 [GRCh38]
Chr3:36893710 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.5546G>A (p.Arg1849Gln) single nucleotide variant not specified [RCV004471238] Chr3:36834879 [GRCh38]
Chr3:36876370 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.5554T>C (p.Cys1852Arg) single nucleotide variant not specified [RCV004471239] Chr3:36834871 [GRCh38]
Chr3:36876362 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.5837G>A (p.Arg1946Gln) single nucleotide variant not specified [RCV004471241] Chr3:36833746 [GRCh38]
Chr3:36875237 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.6004A>G (p.Arg2002Gly) single nucleotide variant not specified [RCV004471242] Chr3:36833579 [GRCh38]
Chr3:36875070 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.6260G>T (p.Gly2087Val) single nucleotide variant not specified [RCV004471243] Chr3:36833323 [GRCh38]
Chr3:36874814 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.6901C>T (p.Arg2301Trp) single nucleotide variant not specified [RCV004471245] Chr3:36832682 [GRCh38]
Chr3:36874173 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.7361C>A (p.Ala2454Asp) single nucleotide variant not specified [RCV004471249] Chr3:36832222 [GRCh38]
Chr3:36873713 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.7850G>A (p.Arg2617Gln) single nucleotide variant not specified [RCV004471253] Chr3:36831733 [GRCh38]
Chr3:36873224 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.8162G>A (p.Arg2721Gln) single nucleotide variant not specified [RCV004471256] Chr3:36831421 [GRCh38]
Chr3:36872912 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.968G>A (p.Arg323Gln) single nucleotide variant not specified [RCV004471259] Chr3:36874236 [GRCh38]
Chr3:36915727 [GRCh37]
Chr3:3p22.2		 uncertain significance
NM_001329998.2(TRANK1):c.8737A>C (p.Asn2913His) single nucleotide variant not specified [RCV004471260] Chr3:36829636 [GRCh38]
Chr3:36871127 [GRCh37]
Chr3:3p22.2		 uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3487
Count of miRNA genes:1001
Interacting mature miRNAs:1223
Transcripts:ENST00000301807, ENST00000428977, ENST00000429976, ENST00000463764, ENST00000463984, ENST00000505962, ENST00000511973, ENST00000513141
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
STS-AA026362  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37336,872,963 - 36,873,206UniSTSGRCh37
Build 36336,847,967 - 36,848,210RGDNCBI36
Celera336,815,733 - 36,815,976RGD
Cytogenetic Map3p22.2UniSTS
HuRef336,813,619 - 36,813,862UniSTS
GeneMap99-GB4 RH Map3129.12UniSTS
G54052  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37336,869,376 - 36,869,508UniSTSGRCh37
Build 36336,844,380 - 36,844,512RGDNCBI36
Celera336,812,146 - 36,812,278RGD
Cytogenetic Map3p22.2UniSTS
HuRef336,810,032 - 36,810,164UniSTS
RH119458  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37336,931,799 - 36,932,072UniSTSGRCh37
Build 36336,906,803 - 36,907,076RGDNCBI36
Celera336,874,567 - 36,874,840RGD
Cytogenetic Map3p22.2UniSTS
HuRef336,872,481 - 36,872,754UniSTS
TNG Radiation Hybrid Map323116.0UniSTS
D3S3189  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh377121,189,630 - 121,189,890UniSTSGRCh37
Build 367120,976,866 - 120,977,126RGDNCBI36
Celera7115,998,912 - 115,999,172RGD
Cytogenetic Map3p22.2UniSTS
HuRef7115,552,656 - 115,552,916UniSTS
HuRef336,842,596 - 36,843,802UniSTS
CRA_TCAGchr7v27120,584,317 - 120,584,577UniSTS
D3S4036  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37336,941,197 - 36,941,375UniSTSGRCh37
Build 36336,916,201 - 36,916,379RGDNCBI36
Celera336,883,965 - 36,884,143RGD
Cytogenetic Map3p22.2UniSTS
D3S3436  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37336,941,149 - 36,941,292UniSTSGRCh37
Build 36336,916,153 - 36,916,296RGDNCBI36
Celera336,883,917 - 36,884,060RGD
Cytogenetic Map3p22.2UniSTS
HuRef336,881,833 - 36,881,976UniSTS
D3S3430  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37336,941,211 - 36,941,388UniSTSGRCh37
Build 36336,916,215 - 36,916,392RGDNCBI36
Celera336,883,979 - 36,884,156RGD
Cytogenetic Map3p22.2UniSTS
HuRef336,881,895 - 36,882,071UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 1470 1333 711 49 1246 43 920 559 1642 70 821 937 8 484 628 1
Low 952 1632 1008 571 692 418 3161 1344 2046 338 623 647 166 1 720 1893 2 2
Below cutoff 15 24 7 4 12 4 274 291 46 11 13 22 267 2

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001329998 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_014831 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011534289 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017007570 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017007571 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017007572 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017007573 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047449325 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047449326 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047449327 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047449328 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047449329 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047449330 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047449331 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047449332 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348588 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348589 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348590 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348591 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348592 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348593 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348594 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348595 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001740389 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001740390 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008486871 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008486872 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB002340 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC011816 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC097360 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC105749 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK096678 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BG750754 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BG960452 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ024165 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX956692 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CD698859 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN313593 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN482191 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068275 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EG328357 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EG328358 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HF583966 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF457622 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF457629 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000429976   ⟹   ENSP00000416168
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl336,826,820 - 36,945,057 (-)Ensembl
RefSeq Acc Id: ENST00000463764   ⟹   ENSP00000485569
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl336,899,107 - 36,908,518 (-)Ensembl
RefSeq Acc Id: ENST00000463984
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl336,842,680 - 36,850,651 (-)Ensembl
RefSeq Acc Id: ENST00000643881   ⟹   ENSP00000496256
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl336,826,832 - 36,857,632 (-)Ensembl
RefSeq Acc Id: ENST00000645898   ⟹   ENSP00000494480
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl336,826,819 - 36,945,054 (-)Ensembl
RefSeq Acc Id: ENST00000646436   ⟹   ENSP00000496740
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl336,826,832 - 36,856,645 (-)Ensembl
RefSeq Acc Id: ENST00000646897   ⟹   ENSP00000496771
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl336,826,826 - 36,944,861 (-)Ensembl
RefSeq Acc Id: NM_001329998   ⟹   NP_001316927
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38336,826,819 - 36,945,054 (-)NCBI
T2T-CHM13v2.0336,828,168 - 36,946,420 (-)NCBI
Sequence:
RefSeq Acc Id: NM_014831   ⟹   NP_055646
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38336,826,819 - 36,945,054 (-)NCBI
GRCh37336,868,308 - 36,986,548 (-)RGD
Build 36336,843,315 - 36,877,415 (-)NCBI Archive
Celera336,811,078 - 36,929,308 (-)RGD
HuRef336,808,964 - 36,927,088 (-)ENTREZGENE
CHM1_1336,818,551 - 36,938,172 (-)NCBI
T2T-CHM13v2.0336,828,168 - 36,946,420 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011534289   ⟹   XP_011532591
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38336,826,819 - 36,931,405 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017007570   ⟹   XP_016863059
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38336,826,819 - 36,945,744 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017007573   ⟹   XP_016863062
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38336,834,762 - 36,945,744 (-)NCBI
Sequence:
RefSeq Acc Id: XM_047449325   ⟹   XP_047305281
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38336,826,819 - 36,945,054 (-)NCBI
RefSeq Acc Id: XM_047449326   ⟹   XP_047305282
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38336,826,819 - 36,945,054 (-)NCBI
RefSeq Acc Id: XM_047449327   ⟹   XP_047305283
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38336,826,819 - 36,925,067 (-)NCBI
RefSeq Acc Id: XM_047449328   ⟹   XP_047305284
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38336,826,819 - 36,945,054 (-)NCBI
RefSeq Acc Id: XM_047449329   ⟹   XP_047305285
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38336,826,819 - 36,908,518 (-)NCBI
RefSeq Acc Id: XM_047449330   ⟹   XP_047305286
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38336,826,819 - 36,899,189 (-)NCBI
RefSeq Acc Id: XM_047449331   ⟹   XP_047305287
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38336,850,249 - 36,945,744 (-)NCBI
RefSeq Acc Id: XM_047449332   ⟹   XP_047305288
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38336,850,249 - 36,945,054 (-)NCBI
RefSeq Acc Id: XM_054348588   ⟹   XP_054204563
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0336,828,168 - 36,932,769 (-)NCBI
RefSeq Acc Id: XM_054348589   ⟹   XP_054204564
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0336,828,168 - 36,946,420 (-)NCBI
RefSeq Acc Id: XM_054348590   ⟹   XP_054204565
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0336,828,168 - 36,946,420 (-)NCBI
RefSeq Acc Id: XM_054348591   ⟹   XP_054204566
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0336,828,168 - 36,926,880 (-)NCBI
RefSeq Acc Id: XM_054348592   ⟹   XP_054204567
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0336,828,168 - 36,947,110 (-)NCBI
RefSeq Acc Id: XM_054348593   ⟹   XP_054204568
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0336,828,168 - 36,946,420 (-)NCBI
RefSeq Acc Id: XM_054348594   ⟹   XP_054204569
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0336,828,168 - 36,900,537 (-)NCBI
RefSeq Acc Id: XM_054348595   ⟹   XP_054204570
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0336,836,111 - 36,947,110 (-)NCBI
RefSeq Acc Id: XR_008486871
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0336,848,606 - 36,947,110 (-)NCBI
RefSeq Acc Id: XR_008486872
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0336,848,701 - 36,946,420 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001316927 (Get FASTA)   NCBI Sequence Viewer  
  NP_055646 (Get FASTA)   NCBI Sequence Viewer  
  XP_011532591 (Get FASTA)   NCBI Sequence Viewer  
  XP_016863059 (Get FASTA)   NCBI Sequence Viewer  
  XP_016863062 (Get FASTA)   NCBI Sequence Viewer  
  XP_047305281 (Get FASTA)   NCBI Sequence Viewer  
  XP_047305282 (Get FASTA)   NCBI Sequence Viewer  
  XP_047305283 (Get FASTA)   NCBI Sequence Viewer  
  XP_047305284 (Get FASTA)   NCBI Sequence Viewer  
  XP_047305285 (Get FASTA)   NCBI Sequence Viewer  
  XP_047305286 (Get FASTA)   NCBI Sequence Viewer  
  XP_047305287 (Get FASTA)   NCBI Sequence Viewer  
  XP_047305288 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204563 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204564 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204565 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204566 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204567 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204568 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204569 (Get FASTA)   NCBI Sequence Viewer  
  XP_054204570 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein BAA20800 (Get FASTA)   NCBI Sequence Viewer  
  BAC04838 (Get FASTA)   NCBI Sequence Viewer  
  CCQ43463 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000416168
  ENSP00000416168.2
  ENSP00000485569.1
  ENSP00000494480
  ENSP00000494480.1
  ENSP00000496256.1
  ENSP00000496740.1
  ENSP00000496771
  ENSP00000496771.1
GenBank Protein O15050 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: NP_055646   ⟸   NM_014831
- Peptide Label: isoform 2
- UniProtKB: Q8N8K0 (UniProtKB/Swiss-Prot),   O15050 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011532591   ⟸   XM_011534289
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_016863059   ⟸   XM_017007570
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_016863062   ⟸   XM_017007573
- Peptide Label: isoform X7
- UniProtKB: A0A2R8Y8A3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001316927   ⟸   NM_001329998
- Peptide Label: isoform 1
- UniProtKB: A0A2R8YEM9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSP00000485569   ⟸   ENST00000463764
RefSeq Acc Id: ENSP00000416168   ⟸   ENST00000429976
RefSeq Acc Id: ENSP00000496256   ⟸   ENST00000643881
RefSeq Acc Id: ENSP00000494480   ⟸   ENST00000645898
RefSeq Acc Id: ENSP00000496740   ⟸   ENST00000646436
RefSeq Acc Id: ENSP00000496771   ⟸   ENST00000646897
RefSeq Acc Id: XP_047305284   ⟸   XM_047449328
- Peptide Label: isoform X4
RefSeq Acc Id: XP_047305282   ⟸   XM_047449326
- Peptide Label: isoform X2
RefSeq Acc Id: XP_047305281   ⟸   XM_047449325
- Peptide Label: isoform X1
RefSeq Acc Id: XP_047305283   ⟸   XM_047449327
- Peptide Label: isoform X2
RefSeq Acc Id: XP_047305285   ⟸   XM_047449329
- Peptide Label: isoform X5
RefSeq Acc Id: XP_047305286   ⟸   XM_047449330
- Peptide Label: isoform X6
RefSeq Acc Id: XP_047305287   ⟸   XM_047449331
- Peptide Label: isoform X8
RefSeq Acc Id: XP_047305288   ⟸   XM_047449332
- Peptide Label: isoform X9
RefSeq Acc Id: XP_054204567   ⟸   XM_054348592
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054204568   ⟸   XM_054348593
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054204565   ⟸   XM_054348590
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054204564   ⟸   XM_054348589
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054204563   ⟸   XM_054348588
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054204566   ⟸   XM_054348591
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054204569   ⟸   XM_054348594
- Peptide Label: isoform X6
RefSeq Acc Id: XP_054204570   ⟸   XM_054348595
- Peptide Label: isoform X7

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-O15050-F1-model_v2 AlphaFold O15050 1-1400 view protein structure
AF-O15050-F2-model_v2 AlphaFold O15050 201-1600 view protein structure
AF-O15050-F3-model_v2 AlphaFold O15050 401-1800 view protein structure
AF-O15050-F4-model_v2 AlphaFold O15050 601-2000 view protein structure
AF-O15050-F5-model_v2 AlphaFold O15050 801-2200 view protein structure
AF-O15050-F6-model_v2 AlphaFold O15050 1001-2400 view protein structure
AF-O15050-F7-model_v2 AlphaFold O15050 1201-2600 view protein structure
AF-O15050-F8-model_v2 AlphaFold O15050 1401-2800 view protein structure
AF-O15050-F9-model_v2 AlphaFold O15050 1601-2925 view protein structure


Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:29011 AgrOrtholog
COSMIC TRANK1 COSMIC
Ensembl Genes ENSG00000168016 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000429976 ENTREZGENE
  ENST00000429976.5 UniProtKB/Swiss-Prot
  ENST00000463764.2 UniProtKB/TrEMBL
  ENST00000643881.1 UniProtKB/TrEMBL
  ENST00000645898 ENTREZGENE
  ENST00000645898.2 UniProtKB/TrEMBL
  ENST00000646436.1 UniProtKB/TrEMBL
  ENST00000646897 ENTREZGENE
  ENST00000646897.1 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  1.25.40.20 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.40.50.300 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000168016 GTEx
HGNC ID HGNC:29011 ENTREZGENE
Human Proteome Map TRANK1 Human Proteome Map
InterPro Ankyrin_rpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ankyrin_rpt-contain_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPR-like_helical_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPR_repeat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TRANK1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:9881 UniProtKB/Swiss-Prot
NCBI Gene 9881 ENTREZGENE
OMIM 619316 OMIM
PANTHER PTHR21529 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR22904 UniProtKB/TrEMBL
  STRESS-INDUCED-PHOSPHOPROTEIN 1 UniProtKB/TrEMBL
  TPR AND ANKYRIN REPEAT-CONTAINING PROTEIN 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA165698606 PharmGKB
PROSITE ANK_REP_REGION UniProtKB/Swiss-Prot
  TPR_REGION UniProtKB/Swiss-Prot
SMART ANK UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48403 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF48452 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF52540 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A096LPF5_HUMAN UniProtKB/TrEMBL
  A0A2R8Y7N6_HUMAN UniProtKB/TrEMBL
  A0A2R8Y890_HUMAN UniProtKB/TrEMBL
  A0A2R8Y8A3 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R8YEM9 ENTREZGENE, UniProtKB/TrEMBL
  L8EAQ6_HUMAN UniProtKB/TrEMBL
  O15050 ENTREZGENE
  Q8N8K0 ENTREZGENE
  TRNK1_HUMAN UniProtKB/Swiss-Prot
UniProt Secondary Q8N8K0 UniProtKB/Swiss-Prot