ZAN (zonadhesin) - Rat Genome Database

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Gene: ZAN (zonadhesin) Chlorocebus sabaeus
Analyze
Symbol: ZAN
Name: zonadhesin
RGD ID: 18725446
Description: ENCODES a protein that exhibits extracellular matrix binding (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); regulation of binding of sperm to zona pellucida (ortholog); ASSOCIATED WITH pleomorphic xanthoastrocytoma (ortholog); FOUND IN plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC103246718; LOC103246943; uncharacterized LOC103246718; zonadhesin-like
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12812,424,806 - 12,464,886 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660703,849,835 - 3,902,875 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
ZAN
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12812,424,806 - 12,464,886 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660703,849,835 - 3,902,875 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
ZAN
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387100,733,595 - 100,797,797 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7100,733,595 - 100,797,797 (+)EnsemblGRCh38hg38GRCh38
GRCh377100,331,218 - 100,395,419 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 367100,169,185 - 100,233,355 (+)NCBINCBI36Build 36hg18NCBI36
Build 34799,975,899 - 100,040,069NCBI
Celera795,061,816 - 95,125,973 (+)NCBICelera
Cytogenetic Map7q22.1NCBI
HuRef794,942,143 - 95,026,175 (+)NCBIHuRef
CHM1_17100,261,555 - 100,326,004 (+)NCBICHM1_1
T2T-CHM13v2.07101,973,655 - 102,037,894 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v2799,690,854 - 99,755,024 (+)NCBI
Zan
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395137,376,899 - 137,475,326 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5137,376,899 - 137,475,326 (-)EnsemblGRCm39 Ensembl
GRCm385137,378,637 - 137,477,064 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5137,378,637 - 137,477,064 (-)EnsemblGRCm38mm10GRCm38
MGSCv375137,819,865 - 137,918,292 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365137,608,425 - 137,706,852 (-)NCBIMGSCv36mm8
Celera5134,361,812 - 134,460,418 (-)NCBICelera
Cytogenetic Map5G2NCBI
cM Map576.4NCBI
Zan
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81224,851,798 - 24,963,837 (+)NCBIGRCr8
mRatBN7.21219,215,018 - 19,322,789 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1219,215,102 - 19,271,240 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.01222,285,377 - 22,389,008 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01224,302,791 - 24,403,597 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41219,534,110 - 19,544,674 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11219,177,051 - 19,533,612 (-)NCBI
Celera1221,019,647 - 21,123,959 (+)NCBICelera
Cytogenetic Map12q12NCBI
Zan
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955573152,700 - 194,466 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955573152,831 - 194,449 (-)NCBIChiLan1.0ChiLan1.0
ZAN
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26118,661,842 - 118,697,998 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan17166,926,473 - 166,962,622 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0792,763,696 - 92,819,419 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17106,154,363 - 106,218,608 (+)NCBIpanpan1.1PanPan1.1panPan2
ZAN
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.168,945,694 - 8,986,238 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha610,651,788 - 10,690,694 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.068,881,745 - 8,920,644 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl68,883,026 - 8,917,805 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.168,734,293 - 8,773,187 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.068,712,158 - 8,751,373 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.068,894,188 - 8,933,099 (-)NCBIUU_Cfam_GSD_1.0
Zan
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344133,243,961 - 133,281,383 (-)NCBIHiC_Itri_2
SpeTri2.0NW_004936543764,764 - 793,004 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZAN
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl38,632,701 - 8,668,880 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.138,638,422 - 8,668,881 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.238,032,726 - 8,095,773 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Zan
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474016,343,968 - 16,374,986 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_037990442   ⟹   XP_037846370
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660703,849,835 - 3,902,875 (+)NCBI
Protein Sequences
Protein RefSeqs XP_037846370 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_037846370   ⟸   XM_037990442


Additional Information

Database Acc Id Source(s)
NCBI Gene ZAN ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-12-03 ZAN  zonadhesin  LOC103246943  zonadhesin-like  Data merged from RGD:18359398 737654 PROVISIONAL
2020-12-03 ZAN  zonadhesin  LOC103246718  uncharacterized LOC103246718  Data merged from RGD:18640775 737654 PROVISIONAL