ZAN (zonadhesin) - Rat Genome Database

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Gene: ZAN (zonadhesin) Pan paniscus
Analyze
Symbol: ZAN
Name: zonadhesin
RGD ID: 11821807
Description: ENCODES a protein that exhibits extracellular matrix binding (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); regulation of binding of sperm to zona pellucida (ortholog); ASSOCIATED WITH pleomorphic xanthoastrocytoma (ortholog); FOUND IN plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC100995994; zonadhesin variant 6; zonadhesin-like
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26118,661,842 - 118,697,998 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan17166,926,473 - 166,962,622 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0792,763,696 - 92,819,419 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17106,154,363 - 106,218,608 (+)NCBIpanpan1.1PanPan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
ZAN
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26118,661,842 - 118,697,998 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan17166,926,473 - 166,962,622 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0792,763,696 - 92,819,419 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17106,154,363 - 106,218,608 (+)NCBIpanpan1.1PanPan1.1panPan2
ZAN
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387100,733,595 - 100,797,797 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7100,733,595 - 100,797,797 (+)EnsemblGRCh38hg38GRCh38
GRCh377100,331,218 - 100,395,419 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 367100,169,185 - 100,233,355 (+)NCBINCBI36Build 36hg18NCBI36
Build 34799,975,899 - 100,040,069NCBI
Celera795,061,816 - 95,125,973 (+)NCBICelera
Cytogenetic Map7q22.1NCBI
HuRef794,942,143 - 95,026,175 (+)NCBIHuRef
CHM1_17100,261,555 - 100,326,004 (+)NCBICHM1_1
T2T-CHM13v2.07101,973,655 - 102,037,894 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v2799,690,854 - 99,755,024 (+)NCBI
Zan
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395137,376,899 - 137,475,326 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5137,376,899 - 137,475,326 (-)EnsemblGRCm39 Ensembl
GRCm385137,378,637 - 137,477,064 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5137,378,637 - 137,477,064 (-)EnsemblGRCm38mm10GRCm38
MGSCv375137,819,865 - 137,918,292 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365137,608,425 - 137,706,852 (-)NCBIMGSCv36mm8
Celera5134,361,812 - 134,460,418 (-)NCBICelera
Cytogenetic Map5G2NCBI
cM Map576.4NCBI
Zan
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81224,851,798 - 24,963,837 (+)NCBIGRCr8
mRatBN7.21219,215,018 - 19,322,789 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1219,215,102 - 19,271,240 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.01222,285,377 - 22,389,008 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01224,302,791 - 24,403,597 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41219,534,110 - 19,544,674 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11219,177,051 - 19,533,612 (-)NCBI
Celera1221,019,647 - 21,123,959 (+)NCBICelera
Cytogenetic Map12q12NCBI
Zan
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955573152,700 - 194,466 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955573152,831 - 194,449 (-)NCBIChiLan1.0ChiLan1.0
ZAN
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.168,945,694 - 8,986,238 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha610,651,788 - 10,690,694 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.068,881,745 - 8,920,644 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl68,883,026 - 8,917,805 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.168,734,293 - 8,773,187 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.068,712,158 - 8,751,373 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.068,894,188 - 8,933,099 (-)NCBIUU_Cfam_GSD_1.0
Zan
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344133,243,961 - 133,281,383 (-)NCBIHiC_Itri_2
SpeTri2.0NW_004936543764,764 - 793,004 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZAN
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl38,632,701 - 8,668,880 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.138,638,422 - 8,668,881 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.238,032,726 - 8,095,773 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ZAN
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12812,424,806 - 12,464,886 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660703,849,835 - 3,902,875 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Zan
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474016,343,968 - 16,374,986 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_055115250   ⟹   XP_054971225
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v26118,661,842 - 118,697,998 (+)NCBI
NHGRI_mPanPan17166,926,473 - 166,962,622 (+)NCBI
Protein Sequences
Protein RefSeqs XP_054971225 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAX37901 (Get FASTA)   NCBI Sequence Viewer  
  ABD14584 (Get FASTA)   NCBI Sequence Viewer  
  ABD14585 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000030728.1
  ENSPPAP00000030750.1
Reference Protein Sequences
RefSeq Acc Id: XP_054971225   ⟸   XM_055115250
Protein Domains
EGF-like   MAM   VWFD


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000038269 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000053592.1 UniProtKB/TrEMBL
  ENSPPAT00000053614.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.120.200 UniProtKB/TrEMBL
  Laminin UniProtKB/TrEMBL
InterPro ConA-like_dom_sf UniProtKB/TrEMBL
  EGF-like_dom UniProtKB/TrEMBL
  MAM_dom UniProtKB/TrEMBL
  Ser_inhib-like_sf UniProtKB/TrEMBL
  TIL_dom UniProtKB/TrEMBL
  TILa_dom UniProtKB/TrEMBL
  Unchr_dom_Cys-rich UniProtKB/TrEMBL
  VWF_dom UniProtKB/TrEMBL
  VWF_type-D UniProtKB/TrEMBL
NCBI Gene ZAN ENTREZGENE
PANTHER APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR UniProtKB/TrEMBL
  CLASS C SCAVENGER RECEPTOR (SUSHI/SCR/CCP AND SOMATOMEDIN B DOMAINS) UniProtKB/TrEMBL
  EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED UniProtKB/TrEMBL
  ZONADHESIN UniProtKB/TrEMBL
Pfam EGF UniProtKB/TrEMBL
  MAM UniProtKB/TrEMBL
  PF08742 UniProtKB/TrEMBL
  TIL UniProtKB/TrEMBL
  TILa UniProtKB/TrEMBL
  VWD UniProtKB/TrEMBL
PRINTS PRICHEXTENSN UniProtKB/TrEMBL
PROSITE EGF_1 UniProtKB/TrEMBL
  EGF_2 UniProtKB/TrEMBL
  EGF_3 UniProtKB/TrEMBL
  MAM_1 UniProtKB/TrEMBL
  MAM_2 UniProtKB/TrEMBL
  VWFD UniProtKB/TrEMBL
SMART EGF UniProtKB/TrEMBL
  MAM UniProtKB/TrEMBL
  SM00832 UniProtKB/TrEMBL
  VWC_out UniProtKB/TrEMBL
  VWD UniProtKB/TrEMBL
Superfamily-SCOP EGF/Laminin UniProtKB/TrEMBL
  SSF49899 UniProtKB/TrEMBL
  SSF57567 UniProtKB/TrEMBL
UniProt A0A2R9BM33_PANPA UniProtKB/TrEMBL
  A0A2R9BQM6_PANPA UniProtKB/TrEMBL
  Q2EG66_PANPA UniProtKB/TrEMBL
  Q2EG67_PANPA UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-06-11 ZAN  zonadhesin  LOC100995994  zonadhesin-like  Data merged from RGD:12005201 737654 PROVISIONAL