Phf23 (PHD finger protein 23) - Rat Genome Database

Name: Phf23
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Phf23 (PHD finger protein 23) Mus musculus

Analyze

Symbol:

Phf23

Name:

PHD finger protein 23

RGD ID:

1622205

MGI Page

MGI

Description:

Predicted to enable metal ion binding activity. Predicted to be involved in negative regulation of autophagosome assembly; negative regulation of autophagosome maturation; and positive regulation of protein ubiquitination. Predicted to act upstream of or within autophagy. Predicted to be located in nucleoplasm. Predicted to be active in nucleus. Is expressed in central nervous system; early conceptus; genitourinary system; and limb. Orthologous to human PHF23 (PHD finger protein 23).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

2410141M05Rik; JUNE-1; novel PHD-finger protein JUNE1; PDH-containing protein JUNE-1; PHD zinc finger containing protein JUNE1; RP23-172M21.13

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	PHF23 (PHD finger protein 23)	HGNC	Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Phf23 (PHD finger protein 23)	RGD	RGD
Chinchilla lanigera (long-tailed chinchilla):	Phf23 (PHD finger protein 23)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	PHF23 (PHD finger protein 23)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	PHF23 (PHD finger protein 23)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Phf23 (PHD finger protein 23)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	PHF23 (PHD finger protein 23)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	PHF23 (PHD finger protein 23)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Phf23 (PHD finger protein 23)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Phf23 (PHD finger protein 23)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	PHF23 (PHD finger protein 23)	Alliance	DIOPT (HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	phf23b (PHD finger protein 23b)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB\|SonicParanoid\|ZFIN)
Danio rerio (zebrafish):	phf23a (PHD finger protein 23a)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB\|SonicParanoid\|ZFIN)

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	69,886,592 - 69,890,837 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	69,886,603 - 69,890,835 (+)	Ensembl		GRCm39 Ensembl
GRCm38	11	69,995,766 - 70,000,011 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	69,995,777 - 70,000,009 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	69,809,273 - 69,813,513 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	69,811,972 - 69,816,111 (+)	NCBI		MGSCv36	mm8
Celera	11	77,543,581 - 77,547,821 (+)	NCBI		Celera
Cytogenetic Map	11	B3	NCBI
cM Map	11	42.95	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

common variable immunodeficiency (ISO)

congenital myasthenic syndrome 2A (ISO)

dyskeratosis congenita (ISO)

genetic disease (ISO)

intellectual disability (ISO)

Li-Fraumeni syndrome (ISO)

very long chain acyl-CoA dehydrogenase deficiency (ISO)

Weissenbacher-Zweymuller syndrome (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (EXP)

17alpha-ethynylestradiol (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2-methylcholine (ISO)

aflatoxin B1 (ISO)

arsane (ISO)

arsenic atom (ISO)

atrazine (ISO)

benzo[a]pyrene diol epoxide I (ISO)

bisphenol A (ISO)

caffeine (ISO)

carbon nanotube (EXP)

chlorpyrifos (EXP)

clofibrate (EXP)

coumarin (ISO)

cyclosporin A (ISO)

epoxiconazole (EXP)

ethyl methanesulfonate (ISO)

flutamide (ISO)

folic acid (EXP)

formaldehyde (ISO)

FR900359 (ISO)

gentamycin (ISO)

iron dichloride (ISO)

ivermectin (ISO)

lead(0) (ISO)

leflunomide (ISO)

methotrexate (ISO)

methyl methanesulfonate (ISO)

nickel atom (ISO)

paracetamol (EXP,ISO)

Soman (ISO)

tamoxifen (EXP)

tetrachloromethane (EXP)

thioacetamide (ISO)

trichostatin A (ISO)

urethane (ISO)

valproic acid (EXP,ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

autophagy (IEA)

negative regulation of autophagosome assembly (IBA,ISO)

negative regulation of autophagosome maturation (IBA,ISO)

positive regulation of protein ubiquitination (IBA,ISO)

Cellular Component

cytoplasm (IEA)

nucleoplasm (ISO)

nucleus (IBA)

Molecular Function

metal ion binding (IEA)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:8889548	PMID:10349636	PMID:10922068	PMID:11042159	PMID:11076861	PMID:11125038	PMID:11217851	PMID:12466851	PMID:12477932	PMID:12904583	PMID:14610273	PMID:15618518
PMID:16141072	PMID:16141073	PMID:17015433	PMID:18287559	PMID:18799693	PMID:20059953	PMID:20412781	PMID:21677750	PMID:21873635	PMID:24535671	PMID:31146259	PMID:32978226

Genomics

Comparative Map Data

Phf23
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	69,886,592 - 69,890,837 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	69,886,603 - 69,890,835 (+)	Ensembl		GRCm39 Ensembl
GRCm38	11	69,995,766 - 70,000,011 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	69,995,777 - 70,000,009 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	69,809,273 - 69,813,513 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	69,811,972 - 69,816,111 (+)	NCBI		MGSCv36	mm8
Celera	11	77,543,581 - 77,547,821 (+)	NCBI		Celera
Cytogenetic Map	11	B3	NCBI
cM Map	11	42.95	NCBI

PHF23
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	7,235,038 - 7,240,828 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	7,235,029 - 7,239,722 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	7,138,357 - 7,142,776 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	7,079,071 - 7,083,549 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	17	7,162,996 - 7,167,472 (-)	NCBI		Celera
Cytogenetic Map	17	p13.1	NCBI
HuRef	17	7,030,142 - 7,034,231 (-)	NCBI		HuRef
CHM1_1	17	7,147,095 - 7,151,617 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	17	7,135,965 - 7,140,642 (-)	NCBI		T2T-CHM13v2.0

Phf23
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	55,217,351 - 55,221,471 (+)	NCBI		GRCr8
mRatBN7.2	10	54,718,663 - 54,722,784 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	54,717,724 - 54,722,782 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	59,380,855 - 59,384,975 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	58,869,435 - 58,873,555 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	54,376,707 - 54,380,824 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	56,605,078 - 56,609,236 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	56,605,140 - 56,609,233 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	56,350,190 - 56,354,355 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	56,841,624 - 56,846,146 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	56,855,246 - 56,859,768 (+)	NCBI
Celera	10	53,872,270 - 53,876,378 (+)	NCBI		Celera
Cytogenetic Map	10	q24	NCBI

Phf23
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955467	9,671,133 - 9,675,434 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955467	9,671,133 - 9,675,434 (+)	NCBI	ChiLan1.0	ChiLan1.0

PHF23
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	14,827,723 - 14,832,176 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	16,793,726 - 16,798,161 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	7,264,944 - 7,269,549 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	7,252,024 - 7,256,756 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	7,252,024 - 7,256,756 (-)	Ensembl	panpan1.1		panPan2

PHF23
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	32,202,636 - 32,207,738 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	32,202,825 - 32,207,000 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	32,340,941 - 32,346,052 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	32,308,259 - 32,313,378 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	32,308,262 - 32,312,683 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	32,273,557 - 32,278,662 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	32,232,584 - 32,237,690 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	32,409,527 - 32,414,643 (-)	NCBI		UU_Cfam_GSD_1.0

Phf23
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	47,054,644 - 47,059,100 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936595	528,516 - 533,235 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936595	528,832 - 533,212 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PHF23
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	52,590,804 - 52,595,266 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	52,590,801 - 52,595,208 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	54,845,281 - 54,847,896 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PHF23
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	6,609,106 - 6,613,693 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	16	6,609,087 - 6,613,690 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666059	14,797,196 - 14,801,651 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Phf23
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624786	9,852,366 - 9,856,524 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624786	9,852,151 - 9,856,541 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Phf23
122 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	1758
Count of miRNA genes:	424
Interacting mature miRNAs:	493
Transcripts:	ENSMUST00000018716, ENSMUST00000101526, ENSMUST00000123817, ENSMUST00000133485, ENSMUST00000135814, ENSMUST00000138186, ENSMUST00000141231, ENSMUST00000146789, ENSMUST00000153684
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
26884453	Sklq16_m	skull length QTL 16, 16 week (mouse)					11	3250000	72690826	Mouse
13208559	Wght10_m	weight 10 (mouse)					11	3950000	88890826	Mouse
13208558	Lgth12_m	body length 12 (mouse)					11	3950000	94890826	Mouse
1300905	Scc6_m	colon tumor susceptibility 6 (mouse)			Not determined		11	6880277	89019734	Mouse
39128214	Lwq20_m	liver weight QTL 20 (mouse)					11	12268637	118022724	Mouse
4141894	Nidd6k_m	Nidd6 on KK-A (mouse)			Not determined			19124204	96897826	Mouse
10412246	Dfs2_m	dental fluorosis suseptibility 2 (mouse)			Not determined		11	21807364	95881231	Mouse
13208569	Bmiq10_m	body mass index QTL 10 (mouse)					11	35890827	84890826	Mouse
1301328	Mol4_m	modifier of LPS-response 4 (mouse)			Not determined		11	36282577	83481356	Mouse
1301788	Lbw8_m	lupus NZB x NZW 8 (mouse)			Not determined		11	36503287	70509492	Mouse
1301896	Tria1_m	T-cell receptor induced activation 1 (mouse)			Not determined		11	36613565	70613855	Mouse
4141853	Skmw17_m	skeletal muscle weight 17 (mouse)			Not determined		11	37080941	71081064	Mouse
10766457	Nwa3_m	New Zealand White autoimmunity 3 (mouse)					11	38016115	72016209	Mouse
11532698	Sluc36a_m	susceptibility to lung cancer 36a (mouse)					11	42256617	76256730	Mouse
11532699	Sluc36b_m	susceptibility to lung cancer 36b (mouse)					11	42256617	76256730	Mouse
4142300	Ctrq3_m	C. trachomatis resistance QTL 3 (mouse)			Not determined		11	44630038	76854757	Mouse
4141367	Inf1_m	acute ozone induced inflammation (mouse)			Not determined			44630038	113058009	Mouse
1302021	Nidd1n_m	non-insulin-dependent diabetes mellitus 1 in NSY (mouse)			Not determined		11	45165873	79978324	Mouse
1357878	Mastr_m	modifier of astrocytoma (mouse)			Not determined		11	45708581	89818733	Mouse
1300765	Bbaa4_m	B.burgdorferi-associated arthritis 4 (mouse)			Not determined		11	46185167	80185262	Mouse
1301988	Bmd11_m	bone mineral density 11 (mouse)			Not determined		11	46319407	80319522	Mouse
1301830	Ssta4_m	susceptibility to Salmonella typhimurium antigens 4 (mouse)			Not determined		11	50078191	84078411	Mouse
13524840	Ppiq9a_m	prepulse inhibition QTL 9a (mouse)					11	52494385	86494385	Mouse
1300774	Pgia7_m	proteoglycan induced arthritis 7 (mouse)			Not determined		11	53390588	87390737	Mouse
4141830	Pregq1_m	pregnancy QTL 1 (mouse)			Not determined		11	54126752	83733652	Mouse
4141875	Etax9_m	ethanol induced ataxia 9 (mouse)			Not determined			55284985	72209927	Mouse
4142121	Tmc1m2_m	Tmc1 modifier 2 (mouse)			Not determined		11	56864027	114157957	Mouse
1300664	Etohcta9_m	ethanol conditioned taste aversion 9 (mouse)			Not determined		11	57754660	91754758	Mouse
10053682	Eae45_m	experimental allergic encephalomyelitis susceptibility 45 (mouse)			Not determined		11	58490555	74754758	Mouse
1300924	Ity2_m	immunity to S. typhimurium 2 (mouse)			Not determined		1	58508030	87695238	Mouse
4141982	Skts-fp2_m	skin tumor susceptibility in FVB and PWK 2 (mouse)			Not determined			58719266	85066529	Mouse
1301987	Pid3_m	prior incubation determinant 3 (mouse)			Not determined		11	61686820	88699728	Mouse
1301319	Dautb4_m	dopamine uptake transporter binding 4 (mouse)			Not determined		11	62156005	96156153	Mouse
27226730	Tibmd1_m	tibia midshaft diameter 1, 5 week (mouse)					11	62590826	109390826	Mouse
1301999	Lmr15_m	leishmaniasis resistance 15 (mouse)			Not determined		11	63319407	81830473	Mouse
10044004	Stzid3_m	streptozotocin induced diabetes susceptibility 3 (mouse)			Not determined		11	63319407	94063918	Mouse
11039502	Ltpr6b_m	Leishmania tropica response 6b (mouse)					11	64830336	98830473	Mouse
11039501	Ltpr6a_m	Leishmania tropica response 6a (mouse)					11	64830336	98830473	Mouse
11039515	Ltpr6_m	Leishmania tropica response 6 (mouse)					11	64830336	98830473	Mouse
1357766	Si5lq6_m	serum IGFBP-5 level QTL 6 (mouse)			Not determined		11	66733420	100733652	Mouse
1301546	Pcir2_m	periosteal circumference 2 (mouse)			Not determined		11	66733420	100733652	Mouse
1301833	Tbbmd5_m	total body bone mineral density 5 (mouse)			Not determined		11	66733420	100733652	Mouse
1300628	Lgth6_m	body length 6 (mouse)			Not determined		11	66733420	100733652	Mouse
4141012	Femwf6_m	femur work to failure 6 (mouse)			Not determined			66733420	100733652	Mouse
1300784	Prdt3_m	prion disease incubation time 3 (mouse)			Not determined		11	66733420	100733652	Mouse
4142316	Ity2b_m	immunity to S. typhimurium 2b (mouse)			Not determined		11	67078191	79813912	Mouse
27226783	Tibl5_m	tibia length 5, 5 week (mouse)					11	68190826	101890826	Mouse
36049778	Ars6_m	antibody response to SARS-CoV 6, day 15, IgM (mouse)					11	68990826	72490826	Mouse
36049779	Ars7_m	antibody response to SARS-CoV 7, day 29, IgG1 (mouse)					11	68990826	72490826	Mouse
36049784	Ars8_m	antibody response to SARS-CoV 8, day 29, IgG2a+IgG2c (mouse)					11	68990826	72490826	Mouse
36049785	Ars9_m	antibody response to SARS-CoV 9, day 29, IgM (mouse)					11	68990826	72490826	Mouse
36049786	Ars10_m	antibody response to SARS-CoV 10, 4 days post-rechallenge, IgG2a+IgG2c (mouse)					11	68990826	72490826	Mouse
36049787	Ars11_m	antibody response to SARS-CoV 11, 4 days post-rechallenge, IgM (mouse)					11	68990826	72490826	Mouse
36049788	Ars1_m	antibody response to SARS-CoV 1, day 7, IgG1 (mouse)					11	68990826	72490826	Mouse
36049789	Ars2_m	antibody response to SARS-CoV 2, day 7, IgG2a+IgG2c (mouse)					11	68990826	72490826	Mouse
36049790	Ars3_m	antibody response to SARS-CoV 3, day 7, IgG2b (mouse)					11	68990826	72490826	Mouse
36049791	Ars4_m	antibody response to SARS-CoV 4, day 7, IgG3 (mouse)					11	68990826	72490826	Mouse
36049792	Ars5_m	antibody response to SARS-CoV 5, day 7, IgM (mouse)					11	68990826	72490826	Mouse
35673314	Ari2_m	antibody response to influenza 2, day 10, IgG3 (mouse)					11	68990826	72490826	Mouse

Markers in Region

RH128955

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	11	69,994,769 - 69,994,944	UniSTS	GRCm38
MGSCv37	11	69,808,271 - 69,808,446	UniSTS	GRCm37
Celera	11	77,542,579 - 77,542,754	UniSTS
Cytogenetic Map	11	B3	UniSTS
Cytogenetic Map	11	B4	UniSTS
cM Map	11	42.0	UniSTS

UniSTS:224312

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	11	69,994,831 - 69,994,943	UniSTS	GRCm38
MGSCv37	11	69,808,333 - 69,808,445	UniSTS	GRCm37
Celera	11	77,542,641 - 77,542,753	UniSTS
Cytogenetic Map	11	B4	UniSTS
Cytogenetic Map	11	B3	UniSTS
cM Map	11	42.0	UniSTS

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001291125	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001291126	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001291127	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_030064	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006534501	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006534502	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_030246427	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_030246428	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_030246429	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_036157091	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AK019135	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK027950	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK029376	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK031159	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK170022	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK170729	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL596185	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY099326	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY099327	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC033533	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BM947867	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BY262829	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BY294224	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BY632579	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CA750740	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466596	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CR933541	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DV662694	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	Y17676	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSMUST00000018716 ⟹ ENSMUSP00000018716

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	11	69,886,603 - 69,890,835 (+)	Ensembl
GRCm38.p6 Ensembl	11	69,995,777 - 70,000,009 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000101526 ⟹ ENSMUSP00000099064

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	11	69,886,702 - 69,890,835 (+)	Ensembl
GRCm38.p6 Ensembl	11	69,995,876 - 70,000,009 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000123817

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	11	69,887,767 - 69,889,322 (+)	Ensembl
GRCm38.p6 Ensembl	11	69,996,941 - 69,998,496 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000133485 ⟹ ENSMUSP00000117373

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	11	69,887,214 - 69,890,591 (+)	Ensembl
GRCm38.p6 Ensembl	11	69,996,388 - 69,999,765 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000135814 ⟹ ENSMUSP00000120665

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	11	69,887,935 - 69,890,832 (+)	Ensembl
GRCm38.p6 Ensembl	11	69,997,109 - 70,000,006 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000138186 ⟹ ENSMUSP00000117635

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	11	69,887,557 - 69,889,577 (+)	Ensembl
GRCm38.p6 Ensembl	11	69,996,731 - 69,998,751 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000141231

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	11	69,886,820 - 69,889,202 (+)	Ensembl
GRCm38.p6 Ensembl	11	69,995,994 - 69,998,376 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000146789

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	11	69,887,783 - 69,889,223 (+)	Ensembl
GRCm38.p6 Ensembl	11	69,996,957 - 69,998,397 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000153684 ⟹ ENSMUSP00000121780

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	11	69,887,817 - 69,890,834 (+)	Ensembl
GRCm38.p6 Ensembl	11	69,996,991 - 70,000,008 (+)	Ensembl

RefSeq Acc Id:

NM_001291125 ⟹ NP_001278054

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	11	69,886,592 - 69,890,837 (+)	NCBI
GRCm38	11	69,995,766 - 70,000,011 (+)	NCBI
Celera	11	77,543,576 - 77,547,821 (+)	NCBI

Sequence:

show sequence

GGGGCAGAAGGGAGGGAGGAGAGAGGAGGAGGAGGAGGAGGGAGCAGGCGGCCGGCGGTGCGGG
GGGAGGGGGCCCGGTCCGGGAGTGCGGGAGGCAGTGGTGGAGGGAGGTGGCGGTAGCGGAGTGG
AGTCTCAACCGCGCCAAGCGGACACTTCGGTGGAGCGAGGCGGTAGAAACACGGAGCACTCAAG
GCAGCACCGGGAATCCCGGCTTCGAGGAGGGGGTCGCCGGACCGGGTGGAGGGGAGGGGGCGAT
GCTGGAAGCCATGGCGGAGCCCAGTCCCGAAGATCCGCCTCCGACTCTTAAACCAGAGACTCAG
CCACCGGAGAAAAGGCGGAGAACCATTGAGGATTTTAACAAATTCTGCAGTTTTGTCTTGGCCT
ATGCTGGTTACATCCCCCCTAGCAAAGAGGCTCCTGACAGTGCTACTCTGCTTGAGAAGATGAA
GCTCAAGGACTCTCTTTTTGATCTGGATGGGCCCAAAGTGGCATCTCCACTCTCTCCCACATCA
TTGACGCATACTTCCCGGCCCCCCGCTGCTCTCGCCCCAGTGCCGCTGTCCCAGGGGGACCTCT
CCCAGCCTCGAAAGAAGGACCGAAAGAATAGAAAGTTGGGACCAGGAGGTGGGGCTGGCTTTGG
GGTGCTTCGGAGACCTCGACCAGCTCCTGGGGATGGGGAAAAGCGGTCTCGAATCAAGAAGAGC
AAGAAGCGGAAGTTGAAAAAGGCAGATCGGGGAGATAGACTCCCACCTCCTGGCCCTCCTAGGG
CTCCTCCCAGTGATACAGACTCTGAAGAGGAGGAGGAAGAGGAAGAAGAGGAAGATGATGAGGA
AGAGATGACAGTGGGGGGTGGAGTCCCAGCCCCTGTGCTCCCAACACCCCCTGAGGCCCCCAGG
CCCCCTGTTACAGTGCACTCTGAAGGTGCTCCCCCTACTGACAGTGAAGGCAAAGATGTGGGCA
GCACAGAAACAAGCCAAGATGGAGATGCTAGCTCCAGTGAAGGCGAGATGCGGGTCATGGATGA
GGACATCATGGTAGAATCAGGTGACGACTCCTGGGATCTGATCACGTGTTACTGCAGAAAGCCC
TTTGCGGGGCGGCCCATGATTGAGTGCAGCCTCTGTGGGACGTGGATCCACCTCTCCTGTGCTA
AGATTAAGAAGACCAACGTTCCCGACTTCTTTTATTGCCAGAAATGCAAGGAACTTCGGCCAGA
GGCCCGGCGGTTAGGGGGTCTCCCCAAATCTGGAGAACCCTGACATCACTAAGGCTGGAACTTG
TGACATTACTTGGGAACTGAGCCTCAGGGTCCCCAGCCTTCCCTTGGAGTGAGGAGGCTGTCCC
CACTTGAGGGCCACAATTCCCAAGGGAGACGTATTTGGAAATGAGTGTCTTCTACTCTGTCCTT
CCTGCTCCATGGACTTGAAGTTGACCCCATTACAGTTGGGTCGGGGAGGCTGGATCTGTAGACA
GAATCTCTGTCCAGTCAACCCTGTACCCTTTTCACTTGCAGGTCCAGGGCTCAAACTGGGATGT
AATGGGATAGTTGTCTATAAAACTGTAGTGTAAATACAGCACTCCCCTCATGTTTCTTCTCTCT
CCCGTTTACTTTCTTTTACACCGGATGTATTTTTAATTTGGGGCTCCCCCATTTGAGCGAGGTT
GCTCAGAGGTGGAGTACCAAAGCCTGTGGAGTGAGGAAGGAAAGAAAAAGGTGTCAATTAGCAC
TCGCCTCGTTTTTAATACTGTTGGCCGGCTGCTCAGACAGACGGCCTGCGTGTTGTAAATAAAG
CAGAGTGGGCTCTTGTGTTTTACAGC

hide sequence

RefSeq Acc Id:

NM_001291126 ⟹ NP_001278055

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	11	69,887,767 - 69,890,837 (+)	NCBI
GRCm38	11	69,996,941 - 70,000,011 (+)	NCBI
Celera	11	77,543,576 - 77,547,821 (+)	NCBI

Sequence:

show sequence

GGGGCGGAGGGACAGCGAAATTGTGGGGAGCGCGGCCGCGGGGTGGGGTGGGGGTCTGGCTCCG
GGCTGCAGCTCTTCGCCCGTCCCGGACGCGAAGTAGCGTTGGGGAGTGTGAGCCTATCCGCCTC
CGACTCTTAAACCAGAGACTCAGCCACCGGAGAAAAGGCGGAGAACCATTGAGGATTTTAACAA
ATTCTGCAGTTTTGTCTTGGCCTATGCTGGTTACATCCCCCCTAGCAAAGAGGAAAGCGATTGG
CCAGCCTCTGGCTCTAGCTCTCCATTGCGAGGTGAGAGTGCAGCAGACAGTGATGGCTGGGACT
CGGCCCCGTCGGACCTTCGAACTATCCAGACTTTTGTTAAGAAAGCAAAGTCATCAAAGAGAAG
GGCAGTTCAATCAGGTCCTACCCAGCCAGGACCCCCAAGGTCCACTTTTTCTCGTCTGCAGGCT
CCTGACAGTGCTACTCTGCTTGAGAAGATGAAGCTCAAGGACTCTCTTTTTGATCTGGATGGGC
CCAAAGTGGCATCTCCACTCTCTCCCACATCATTGACGCATACTTCCCGGCCCCCCGCTGCTCT
CGCCCCAGTGCCGCTGTCCCAGGGGGACCTCTCCCAGCCTCGAAAGAAGGACCGAAAGAATAGA
AAGTTGGGACCAGGAGGTGGGGCTGGCTTTGGGGTGCTTCGGAGACCTCGACCAGCTCCTGGGG
ATGGGGAAAAGCGGTCTCGAATCAAGAAGAGCAAGAAGCGGAAGTTGAAAAAGGCAGATCGGGG
AGATAGACTCCCACCTCCTGGCCCTCCTAGGGCTCCTCCCAGTGATACAGACTCTGAAGAGGAG
GAGGAAGAGGAAGAAGAGGAAGATGATGAGGAAGAGATGACAGTGGGGGGTGGAGTCCCAGCCC
CTGTGCTCCCAACACCCCCTGAGGCCCCCAGGCCCCCTGTTACAGTGCACTCTGAAGGTGCTCC
CCCTACTGACAGTGAAGGCAAAGATGTGGGCAGCACAGAAACAAGCCAAGATGGAGATGCTAGC
TCCAGTGAAGGCGAGATGCGGGTCATGGATGAGGACATCATGGTAGAATCAGGTGACGACTCCT
GGGATCTGATCACGTGTTACTGCAGAAAGCCCTTTGCGGGGCGGCCCATGATTGAGTGCAGCCT
CTGTGGGACGTGGATCCACCTCTCCTGTGCTAAGATTAAGAAGACCAACGTTCCCGACTTCTTT
TATTGCCAGAAATGCAAGGAACTTCGGCCAGAGGCCCGGCGGTTAGGGGGTCTCCCCAAATCTG
GAGAACCCTGACATCACTAAGGCTGGAACTTGTGACATTACTTGGGAACTGAGCCTCAGGGTCC
CCAGCCTTCCCTTGGAGTGAGGAGGCTGTCCCCACTTGAGGGCCACAATTCCCAAGGGAGACGT
ATTTGGAAATGAGTGTCTTCTACTCTGTCCTTCCTGCTCCATGGACTTGAAGTTGACCCCATTA
CAGTTGGGTCGGGGAGGCTGGATCTGTAGACAGAATCTCTGTCCAGTCAACCCTGTACCCTTTT
CACTTGCAGGTCCAGGGCTCAAACTGGGATGTAATGGGATAGTTGTCTATAAAACTGTAGTGTA
AATACAGCACTCCCCTCATGTTTCTTCTCTCTCCCGTTTACTTTCTTTTACACCGGATGTATTT
TTAATTTGGGGCTCCCCCATTTGAGCGAGGTTGCTCAGAGGTGGAGTACCAAAGCCTGTGGAGT
GAGGAAGGAAAGAAAAAGGTGTCAATTAGCACTCGCCTCGTTTTTAATACTGTTGGCCGGCTGC
TCAGACAGACGGCCTGCGTGTTGTAAATAAAGCAGAGTGGGCTCTTGTGTTTTACAGC

hide sequence

RefSeq Acc Id:

NM_001291127 ⟹ NP_001278056

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	11	69,888,288 - 69,890,837 (+)	NCBI
GRCm38	11	69,997,462 - 70,000,011 (+)	NCBI
Celera	11	77,543,576 - 77,547,821 (+)	NCBI

Sequence:

show sequence

AGCTGGGGGCTGTGGCTGGCTGGGCTAGGCGACCTCACGGTGGATGGGATTAGGTCGGGAACTC
CGAGGTTTAGAGGTAGGATTTTACACGGACTCTTTTCTAGTGCCTTGACTCAGCTTTTATTGAT
TTCACAGATCCGCCTCCGACTCTTAAACCAGAGACTCAGCCACCGGAGAAAAGGCGGAGAACCA
TTGAGGATTTTAACAAATTCTGCAGTTTTGTCTTGGCCTATGCTGGTTACATCCCCCCTAGCAA
AGAGGAAAGCGATTGGCCAGCCTCTGGCTCTAGCTCTCCATTGCGAGGTGAGAGTGCAGCAGAC
AGTGATGGCTGGGACTCGGCCCCGTCGGACCTTCGAACTATCCAGACTTTTGTTAAGAAAGCAA
AGTCATCAAAGAGAAGGGCAGTTCAATCAGGTCCTACCCAGCCAGGACCCCCAAGGTCCACTTT
TTCTCGTCTGCAGGCTCCTGACAGTGCTACTCTGCTTGAGAAGATGAAGCTCAAGGACTCTCTT
TTTGATCTGGATGGGCCCAAAGTGGCATCTCCACTCTCTCCCACATCATTGACGCATACTTCCC
GGCCCCCCGCTGCTCTCGCCCCAGTGCCGCTGTCCCAGGGGGACCTCTCCCAGCCTCGAAAGAA
GGACCGAAAGAATAGAAAGTTGGGACCAGGAGGTGGGGCTGGCTTTGGGGTGCTTCGGAGACCT
CGACCAGCTCCTGGGGATGGGGAAAAGCGGTCTCGAATCAAGAAGAGCAAGAAGCGGAAGTTGA
AAAAGGCAGATCGGGGAGATAGACTCCCACCTCCTGGCCCTCCTAGGGCTCCTCCCAGTGATAC
AGACTCTGAAGAGGAGGAGGAAGAGGAAGAAGAGGAAGATGATGAGGAAGAGATGACAGTGGGG
GGTGGAGTCCCAGCCCCTGTGCTCCCAACACCCCCTGAGGCCCCCAGGCCCCCTGTTACAGTGC
ACTCTGAAGGTGCTCCCCCTACTGACAGTGAAGGCAAAGATGTGGGCAGCACAGAAACAAGCCA
AGATGGAGATGCTAGCTCCAGTGAAGGCGAGATGCGGGTCATGGATGAGGACATCATGGTAGAA
TCAGGTGACGACTCCTGGGATCTGATCACGTGTTACTGCAGAAAGCCCTTTGCGGGGCGGCCCA
TGATTGAGTGCAGCCTCTGTGGGACGTGGATCCACCTCTCCTGTGCTAAGATTAAGAAGACCAA
CGTTCCCGACTTCTTTTATTGCCAGAAATGCAAGGAACTTCGGCCAGAGGCCCGGCGGTTAGGG
GGTCTCCCCAAATCTGGAGAACCCTGACATCACTAAGGCTGGAACTTGTGACATTACTTGGGAA
CTGAGCCTCAGGGTCCCCAGCCTTCCCTTGGAGTGAGGAGGCTGTCCCCACTTGAGGGCCACAA
TTCCCAAGGGAGACGTATTTGGAAATGAGTGTCTTCTACTCTGTCCTTCCTGCTCCATGGACTT
GAAGTTGACCCCATTACAGTTGGGTCGGGGAGGCTGGATCTGTAGACAGAATCTCTGTCCAGTC
AACCCTGTACCCTTTTCACTTGCAGGTCCAGGGCTCAAACTGGGATGTAATGGGATAGTTGTCT
ATAAAACTGTAGTGTAAATACAGCACTCCCCTCATGTTTCTTCTCTCTCCCGTTTACTTTCTTT
TACACCGGATGTATTTTTAATTTGGGGCTCCCCCATTTGAGCGAGGTTGCTCAGAGGTGGAGTA
CCAAAGCCTGTGGAGTGAGGAAGGAAAGAAAAAGGTGTCAATTAGCACTCGCCTCGTTTTTAAT
ACTGTTGGCCGGCTGCTCAGACAGACGGCCTGCGTGTTGTAAATAAAGCAGAGTGGGCTCTTGT
GTTTTACAGC

hide sequence

RefSeq Acc Id:

NM_030064 ⟹ NP_084340

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	11	69,886,592 - 69,890,837 (+)	NCBI
GRCm38	11	69,995,766 - 70,000,011 (+)	NCBI
MGSCv37	11	69,809,273 - 69,813,513 (+)	RGD
Celera	11	77,543,576 - 77,547,821 (+)	NCBI
cM Map	11		ENTREZGENE

Sequence:

show sequence

GGGGCAGAAGGGAGGGAGGAGAGAGGAGGAGGAGGAGGAGGGAGCAGGCGGCCGGCGGTGCGGG
GGGAGGGGGCCCGGTCCGGGAGTGCGGGAGGCAGTGGTGGAGGGAGGTGGCGGTAGCGGAGTGG
AGTCTCAACCGCGCCAAGCGGACACTTCGGTGGAGCGAGGCGGTAGAAACACGGAGCACTCAAG
GCAGCACCGGGAATCCCGGCTTCGAGGAGGGGGTCGCCGGACCGGGTGGAGGGGAGGGGGCGAT
GCTGGAAGCCATGGCGGAGCCCAGTCCCGAAGATCCGCCTCCGACTCTTAAACCAGAGACTCAG
CCACCGGAGAAAAGGCGGAGAACCATTGAGGATTTTAACAAATTCTGCAGTTTTGTCTTGGCCT
ATGCTGGTTACATCCCCCCTAGCAAAGAGGAAAGCGATTGGCCAGCCTCTGGCTCTAGCTCTCC
ATTGCGAGGTGAGAGTGCAGCAGACAGTGATGGCTGGGACTCGGCCCCGTCGGACCTTCGAACT
ATCCAGACTTTTGTTAAGAAAGCAAAGTCATCAAAGAGAAGGGCAGTTCAATCAGGTCCTACCC
AGCCAGGACCCCCAAGGTCCACTTTTTCTCGTCTGCAGGCTCCTGACAGTGCTACTCTGCTTGA
GAAGATGAAGCTCAAGGACTCTCTTTTTGATCTGGATGGGCCCAAAGTGGCATCTCCACTCTCT
CCCACATCATTGACGCATACTTCCCGGCCCCCCGCTGCTCTCGCCCCAGTGCCGCTGTCCCAGG
GGGACCTCTCCCAGCCTCGAAAGAAGGACCGAAAGAATAGAAAGTTGGGACCAGGAGGTGGGGC
TGGCTTTGGGGTGCTTCGGAGACCTCGACCAGCTCCTGGGGATGGGGAAAAGCGGTCTCGAATC
AAGAAGAGCAAGAAGCGGAAGTTGAAAAAGGCAGATCGGGGAGATAGACTCCCACCTCCTGGCC
CTCCTAGGGCTCCTCCCAGTGATACAGACTCTGAAGAGGAGGAGGAAGAGGAAGAAGAGGAAGA
TGATGAGGAAGAGATGACAGTGGGGGGTGGAGTCCCAGCCCCTGTGCTCCCAACACCCCCTGAG
GCCCCCAGGCCCCCTGTTACAGTGCACTCTGAAGGTGCTCCCCCTACTGACAGTGAAGGCAAAG
ATGTGGGCAGCACAGAAACAAGCCAAGATGGAGATGCTAGCTCCAGTGAAGGCGAGATGCGGGT
CATGGATGAGGACATCATGGTAGAATCAGGTGACGACTCCTGGGATCTGATCACGTGTTACTGC
AGAAAGCCCTTTGCGGGGCGGCCCATGATTGAGTGCAGCCTCTGTGGGACGTGGATCCACCTCT
CCTGTGCTAAGATTAAGAAGACCAACGTTCCCGACTTCTTTTATTGCCAGAAATGCAAGGAACT
TCGGCCAGAGGCCCGGCGGTTAGGGGGTCTCCCCAAATCTGGAGAACCCTGACATCACTAAGGC
TGGAACTTGTGACATTACTTGGGAACTGAGCCTCAGGGTCCCCAGCCTTCCCTTGGAGTGAGGA
GGCTGTCCCCACTTGAGGGCCACAATTCCCAAGGGAGACGTATTTGGAAATGAGTGTCTTCTAC
TCTGTCCTTCCTGCTCCATGGACTTGAAGTTGACCCCATTACAGTTGGGTCGGGGAGGCTGGAT
CTGTAGACAGAATCTCTGTCCAGTCAACCCTGTACCCTTTTCACTTGCAGGTCCAGGGCTCAAA
CTGGGATGTAATGGGATAGTTGTCTATAAAACTGTAGTGTAAATACAGCACTCCCCTCATGTTT
CTTCTCTCTCCCGTTTACTTTCTTTTACACCGGATGTATTTTTAATTTGGGGCTCCCCCATTTG
AGCGAGGTTGCTCAGAGGTGGAGTACCAAAGCCTGTGGAGTGAGGAAGGAAAGAAAAAGGTGTC
AATTAGCACTCGCCTCGTTTTTAATACTGTTGGCCGGCTGCTCAGACAGACGGCCTGCGTGTTG
TAAATAAAGCAGAGTGGGCTCTTGTGTTTTACAGC

hide sequence

RefSeq Acc Id:

XM_006534501 ⟹ XP_006534564

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	11	69,887,749 - 69,890,835 (+)	NCBI
GRCm38	11	69,996,923 - 70,000,009 (+)	NCBI

Sequence:

show sequence

GGGCTAAAGCCCCGGATGGGGGCGGAGGGACAGCGAAATTGTGGGGAGCGCGGCCGCGGGGTGG
GGTGGGGGTCTGGCTCCGGGCTGCAGCTCTTCGCCCGTCCCGGACGCGAAGTAGCGTTGGGGAG
TGTGAGCCTGTATCCGCCTCCGACTCTTAAACCAGAGACTCAGCCACCGGAGAAAAGGCGGAGA
ACCATTGAGGATTTTAACAAATTCTGCAGTTTTGTCTTGGCCTATGCTGGTTACATCCCCCCTA
GCAAAGAGGAAAGCGATTGGCCAGCCTCTGGCTCTAGCTCTCCATTGCGAGGTGAGAGTGCAGC
AGACAGTGATGGCTGGGACTCGGCCCCGTCGGACCTTCGAACTATCCAGACTTTTGTTAAGAAA
GCAAAGTCATCAAAGAGAAGGGCAGTTCAATCAGGTCCTACCCAGCCAGGACCCCCAAGGTCCA
CTTTTTCTCGTCTGCAGGCTCCTGACAGTGCTACTCTGCTTGAGAAGATGAAGCTCAAGGACTC
TCTTTTTGATCTGGATGGGCCCAAAGTGGCATCTCCACTCTCTCCCACATCATTGACGCATACT
TCCCGGCCCCCCGCTGCTCTCGCCCCAGTGCCGCTGTCCCAGGGGGACCTCTCCCAGCCTCGAA
AGAAGGACCGAAAGAATAGAAAGTTGGGACCAGGAGGTGGGGCTGGCTTTGGGGTGCTTCGGAG
ACCTCGACCAGCTCCTGGGGATGGGGAAAAGCGGTCTCGAATCAAGAAGAGCAAGAAGCGGAAG
TTGAAAAAGGCAGATCGGGGAGATAGACTCCCACCTCCTGGCCCTCCTAGGGCTCCTCCCAGTG
ATACAGACTCTGAAGAGGAGGAGGAAGAGGAAGAAGAGGAAGATGATGAGGAAGAGATGACAGT
GGGGGGTGGAGTCCCAGCCCCTGTGCTCCCAACACCCCCTGAGGCCCCCAGGCCCCCTGTTACA
GTGCACTCTGAAGGTGCTCCCCCTACTGACAGTGAAGGCAAAGATGTGGGCAGCACAGAAACAA
GCCAAGATGGAGATGCTAGCTCCAGTGAAGGCGAGATGCGGGTCATGGATGAGGACATCATGGT
AGAATCAGGTGACGACTCCTGGGATCTGATCACGTGTTACTGCAGAAAGCCCTTTGCGGGGCGG
CCCATGATTGAGTGCAGCCTCTGTGGGACGTGGATCCACCTCTCCTGTGCTAAGATTAAGAAGA
CCAACGTTCCCGACTTCTTTTATTGCCAGAAATGCAAGGAACTTCGGCCAGAGGCCCGGCGGTT
AGGGGGTCTCCCCAAATCTGGAGAACCCTGACATCACTAAGGCTGGAACTTGTGACATTACTTG
GGAACTGAGCCTCAGGGTCCCCAGCCTTCCCTTGGAGTGAGGAGGCTGTCCCCACTTGAGGGCC
ACAATTCCCAAGGGAGACGTATTTGGAAATGAGTGTCTTCTACTCTGTCCTTCCTGCTCCATGG
ACTTGAAGTTGACCCCATTACAGTTGGGTCGGGGAGGCTGGATCTGTAGACAGAATCTCTGTCC
AGTCAACCCTGTACCCTTTTCACTTGCAGGTCCAGGGCTCAAACTGGGATGTAATGGGATAGTT
GTCTATAAAACTGTAGTGTAAATACAGCACTCCCCTCATGTTTCTTCTCTCTCCCGTTTACTTT
CTTTTACACCGGATGTATTTTTAATTTGGGGCTCCCCCATTTGAGCGAGGTTGCTCAGAGGTGG
AGTACCAAAGCCTGTGGAGTGAGGAAGGAAAGAAAAAGGTGTCAATTAGCACTCGCCTCGTTTT
TAATACTGTTGGCCGGCTGCTCAGACAGACGGCCTGCGTGTTGTAAATAAAGCAGAGTGGGCTC
TTGTGTTTTACA

hide sequence

RefSeq Acc Id:

XM_006534502 ⟹ XP_006534565

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	11	69,887,753 - 69,890,835 (+)	NCBI
GRCm38	11	69,996,945 - 70,000,009 (+)	NCBI

Sequence:

show sequence

TAAAGCCCCGGATGGGGGCGGAGGGACAGCGAAATTGTGGGGAGCGCGGCCGCGGGGTGGGGTG
GGGGTCTGGCTCCGGGCTGCAGCTCTTCGCCCGTCCCGGACGCGAAGTAGCGTTGGGGAGTGTG
AGCCTGTATCCGCCTCCGACTCTTAAACCAGAGACTCAGCCACCGGAGAAAAGGCGGAGAACCA
TTGAGGATTTTAACAAATTCTGCAGTTTTGTCTTGGCCTATGCTGGTTACATCCCCCCTAGCAA
AGAGGCTCCTGACAGTGCTACTCTGCTTGAGAAGATGAAGCTCAAGGACTCTCTTTTTGATCTG
GATGGGCCCAAAGTGGCATCTCCACTCTCTCCCACATCATTGACGCATACTTCCCGGCCCCCCG
CTGCTCTCGCCCCAGTGCCGCTGTCCCAGGGGGACCTCTCCCAGCCTCGAAAGAAGGACCGAAA
GAATAGAAAGTTGGGACCAGGAGGTGGGGCTGGCTTTGGGGTGCTTCGGAGACCTCGACCAGCT
CCTGGGGATGGGGAAAAGCGGTCTCGAATCAAGAAGAGCAAGAAGCGGAAGTTGAAAAAGGCAG
ATCGGGGAGATAGACTCCCACCTCCTGGCCCTCCTAGGGCTCCTCCCAGTGATACAGACTCTGA
AGAGGAGGAGGAAGAGGAAGAAGAGGAAGATGATGAGGAAGAGATGACAGTGGGGGGTGGAGTC
CCAGCCCCTGTGCTCCCAACACCCCCTGAGGCCCCCAGGCCCCCTGTTACAGTGCACTCTGAAG
GTGCTCCCCCTACTGACAGTGAAGGCAAAGATGTGGGCAGCACAGAAACAAGCCAAGATGGAGA
TGCTAGCTCCAGTGAAGGCGAGATGCGGGTCATGGATGAGGACATCATGGTAGAATCAGGTGAC
GACTCCTGGGATCTGATCACGTGTTACTGCAGAAAGCCCTTTGCGGGGCGGCCCATGATTGAGT
GCAGCCTCTGTGGGACGTGGATCCACCTCTCCTGTGCTAAGATTAAGAAGACCAACGTTCCCGA
CTTCTTTTATTGCCAGAAATGCAAGGAACTTCGGCCAGAGGCCCGGCGGTTAGGGGGTCTCCCC
AAATCTGGAGAACCCTGACATCACTAAGGCTGGAACTTGTGACATTACTTGGGAACTGAGCCTC
AGGGTCCCCAGCCTTCCCTTGGAGTGAGGAGGCTGTCCCCACTTGAGGGCCACAATTCCCAAGG
GAGACGTATTTGGAAATGAGTGTCTTCTACTCTGTCCTTCCTGCTCCATGGACTTGAAGTTGAC
CCCATTACAGTTGGGTCGGGGAGGCTGGATCTGTAGACAGAATCTCTGTCCAGTCAACCCTGTA
CCCTTTTCACTTGCAGGTCCAGGGCTCAAACTGGGATGTAATGGGATAGTTGTCTATAAAACTG
TAGTGTAAATACAGCACTCCCCTCATGTTTCTTCTCTCTCCCGTTTACTTTCTTTTACACCGGA
TGTATTTTTAATTTGGGGCTCCCCCATTTGAGCGAGGTTGCTCAGAGGTGGAGTACCAAAGCCT
GTGGAGTGAGGAAGGAAAGAAAAAGGTGTCAATTAGCACTCGCCTCGTTTTTAATACTGTTGGC
CGGCTGCTCAGACAGACGGCCTGCGTGTTGTAAATAAAGCAGAGTGGGCTCTTGTGTTTTACA

hide sequence

RefSeq Acc Id:

XM_030246427 ⟹ XP_030102287

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	11	69,887,831 - 69,890,835 (+)	NCBI
GRCm38	11	69,997,068 - 70,000,009 (+)	NCBI

Sequence:

show sequence

GGCTGCAGCTCTTCGCCCGTCCCGGACGCGAAGTAGCGTTGGGGAGTGTGAGCCTGTGTGTGTT
TGGGGTGGGGGTGAGGGGCGCGCCCGGCCTCGTGTTCGAGTCGAAGGGGCCCGGAGGGCGGGGA
GCAGTTCAGCGTGGTCATCCTGGACCCTGGGGGCGGGCAGGCGGCTTGTGCGGTCTCGGAGGGC
CCAGGGCAGTGGAGCGCGGCCGGCTGGGAACTCTGGGCTCCGGGCGCGTGTGAAGGACGGGGGC
GGGCGGTGGCCTGGTCTCGCCCCGGGAGCGATCCGCCTCCGACTCTTAAACCAGAGACTCAGCC
ACCGGAGAAAAGGCGGAGAACCATTGAGGATTTTAACAAATTCTGCAGTTTTGTCTTGGCCTAT
GCTGGTTACATCCCCCCTAGCAAAGAGGAAAGCGATTGGCCAGCCTCTGGCTCTAGCTCTCCAT
TGCGAGGTGAGAGTGCAGCAGACAGTGATGGCTGGGACTCGGCCCCGTCGGACCTTCGAACTAT
CCAGACTTTTGTTAAGAAAGCAAAGTCATCAAAGAGAAGGGCAGTTCAATCAGGTCCTACCCAG
CCAGGACCCCCAAGGTCCACTTTTTCTCGTCTGCAGGCTCCTGACAGTGCTACTCTGCTTGAGA
AGATGAAGCTCAAGGACTCTCTTTTTGATCTGGATGGGCCCAAAGTGGCATCTCCACTCTCTCC
CACATCATTGACGCATACTTCCCGGCCCCCCGCTGCTCTCGCCCCAGTGCCGCTGTCCCAGGGG
GACCTCTCCCAGCCTCGAAAGAAGGACCGAAAGAATAGAAAGTTGGGACCAGGAGGTGGGGCTG
GCTTTGGGGTGCTTCGGAGACCTCGACCAGCTCCTGGGGATGGGGAAAAGCGGTCTCGAATCAA
GAAGAGCAAGAAGCGGAAGTTGAAAAAGGCAGATCGGGGAGATAGACTCCCACCTCCTGGCCCT
CCTAGGGCTCCTCCCAGTGATACAGACTCTGAAGAGGAGGAGGAAGAGGAAGAAGAGGAAGATG
ATGAGGAAGAGATGACAGTGGGGGGTGGAGTCCCAGCCCCTGTGCTCCCAACACCCCCTGAGGC
CCCCAGGCCCCCTGTTACAGTGCACTCTGAAGGTGCTCCCCCTACTGACAGTGAAGGCAAAGAT
GTGGGCAGCACAGAAACAAGCCAAGATGGAGATGCTAGCTCCAGTGAAGGCGAGATGCGGGTCA
TGGATGAGGACATCATGGTAGAATCAGGTGACGACTCCTGGGATCTGATCACGTGTTACTGCAG
AAAGCCCTTTGCGGGGCGGCCCATGATTGAGTGCAGCCTCTGTGGGACGTGGATCCACCTCTCC
TGTGCTAAGATTAAGAAGACCAACGTTCCCGACTTCTTTTATTGCCAGAAATGCAAGGAACTTC
GGCCAGAGGCCCGGCGGTTAGGGGGTCTCCCCAAATCTGGAGAACCCTGACATCACTAAGGCTG
GAACTTGTGACATTACTTGGGAACTGAGCCTCAGGGTCCCCAGCCTTCCCTTGGAGTGAGGAGG
CTGTCCCCACTTGAGGGCCACAATTCCCAAGGGAGACGTATTTGGAAATGAGTGTCTTCTACTC
TGTCCTTCCTGCTCCATGGACTTGAAGTTGACCCCATTACAGTTGGGTCGGGGAGGCTGGATCT
GTAGACAGAATCTCTGTCCAGTCAACCCTGTACCCTTTTCACTTGCAGGTCCAGGGCTCAAACT
GGGATGTAATGGGATAGTTGTCTATAAAACTGTAGTGTAAATACAGCACTCCCCTCATGTTTCT
TCTCTCTCCCGTTTACTTTCTTTTACACCGGATGTATTTTTAATTTGGGGCTCCCCCATTTGAG
CGAGGTTGCTCAGAGGTGGAGTACCAAAGCCTGTGGAGTGAGGAAGGAAAGAAAAAGGTGTCAA
TTAGCACTCGCCTCGTTTTTAATACTGTTGGCCGGCTGCTCAGACAGACGGCCTGCGTGTTGTA
AATAAAGCAGAGTGGGCTCTTGTGTTTTACA

hide sequence

RefSeq Acc Id:

XM_030246428 ⟹ XP_030102288

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	11	69,887,768 - 69,890,835 (+)	NCBI
GRCm38	11	69,996,963 - 70,000,009 (+)	NCBI

Sequence:

show sequence

GGGCGGAGGGACAGCGAAATTGTGGGGAGCGCGGCCGCGGGGTGGGGTGGGGGTCTGGCTCCGG
GCTGCAGCTCTTCGCCCGTCCCGGACGCGAAATCCGCCTCCGACTCTTAAACCAGAGACTCAGC
CACCGGAGAAAAGGCGGAGAACCATTGAGGATTTTAACAAATTCTGCAGTTTTGTCTTGGCCTA
TGCTGGTTACATCCCCCCTAGCAAAGAGGCTCCTGACAGTGCTACTCTGCTTGAGAAGATGAAG
CTCAAGGACTCTCTTTTTGATCTGGATGGGCCCAAAGTGGCATCTCCACTCTCTCCCACATCAT
TGACGCATACTTCCCGGCCCCCCGCTGCTCTCGCCCCAGTGCCGCTGTCCCAGGGGGACCTCTC
CCAGCCTCGAAAGAAGGACCGAAAGAATAGAAAGTTGGGACCAGGAGGTGGGGCTGGCTTTGGG
GTGCTTCGGAGACCTCGACCAGCTCCTGGGGATGGGGAAAAGCGGTCTCGAATCAAGAAGAGCA
AGAAGCGGAAGTTGAAAAAGGCAGATCGGGGAGATAGACTCCCACCTCCTGGCCCTCCTAGGGC
TCCTCCCAGTGATACAGACTCTGAAGAGGAGGAGGAAGAGGAAGAAGAGGAAGATGATGAGGAA
GAGATGACAGTGGGGGGTGGAGTCCCAGCCCCTGTGCTCCCAACACCCCCTGAGGCCCCCAGGC
CCCCTGTTACAGTGCACTCTGAAGGTGCTCCCCCTACTGACAGTGAAGGCAAAGATGTGGGCAG
CACAGAAACAAGCCAAGATGGAGATGCTAGCTCCAGTGAAGGCGAGATGCGGGTCATGGATGAG
GACATCATGGTAGAATCAGGTGACGACTCCTGGGATCTGATCACGTGTTACTGCAGAAAGCCCT
TTGCGGGGCGGCCCATGATTGAGTGCAGCCTCTGTGGGACGTGGATCCACCTCTCCTGTGCTAA
GATTAAGAAGACCAACGTTCCCGACTTCTTTTATTGCCAGAAATGCAAGGAACTTCGGCCAGAG
GCCCGGCGGTTAGGGGGTCTCCCCAAATCTGGAGAACCCTGACATCACTAAGGCTGGAACTTGT
GACATTACTTGGGAACTGAGCCTCAGGGTCCCCAGCCTTCCCTTGGAGTGAGGAGGCTGTCCCC
ACTTGAGGGCCACAATTCCCAAGGGAGACGTATTTGGAAATGAGTGTCTTCTACTCTGTCCTTC
CTGCTCCATGGACTTGAAGTTGACCCCATTACAGTTGGGTCGGGGAGGCTGGATCTGTAGACAG
AATCTCTGTCCAGTCAACCCTGTACCCTTTTCACTTGCAGGTCCAGGGCTCAAACTGGGATGTA
ATGGGATAGTTGTCTATAAAACTGTAGTGTAAATACAGCACTCCCCTCATGTTTCTTCTCTCTC
CCGTTTACTTTCTTTTACACCGGATGTATTTTTAATTTGGGGCTCCCCCATTTGAGCGAGGTTG
CTCAGAGGTGGAGTACCAAAGCCTGTGGAGTGAGGAAGGAAAGAAAAAGGTGTCAATTAGCACT
CGCCTCGTTTTTAATACTGTTGGCCGGCTGCTCAGACAGACGGCCTGCGTGTTGTAAATAAAGC
AGAGTGGGCTCTTGTGTTTTACA

hide sequence

RefSeq Acc Id:

XM_030246429 ⟹ XP_030102289

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	11	69,887,894 - 69,890,835 (+)	NCBI
GRCm38	11	69,997,068 - 70,000,009 (+)	NCBI

Sequence:

show sequence

TTGGGGTGGGGGTGAGGGGCGCGCCCGGCCTCGTGTTCGAGTCGAAGGGGCCCGGAGGGCGGGG
AGCAGTTCAGCGTGGTCATCCTGGACCCTGGGGGCGGGCAGGCGGCTTGTGCGGTCTCGGAGGG
CCCAGGGCAGTGGAGCGCGGCCGGCTGGGAACTCTGGGCTCCGGGCGCGTGTGAAGGACGGGGG
CGGGCGGTGGCCTGGTCTCGCCCCGGGAGCGATCCGCCTCCGACTCTTAAACCAGAGACTCAGC
CACCGGAGAAAAGGCGGAGAACCATTGAGGATTTTAACAAATTCTGCAGTTTTGTCTTGGCCTA
TGCTGGTTACATCCCCCCTAGCAAAGAGGCTCCTGACAGTGCTACTCTGCTTGAGAAGATGAAG
CTCAAGGACTCTCTTTTTGATCTGGATGGGCCCAAAGTGGCATCTCCACTCTCTCCCACATCAT
TGACGCATACTTCCCGGCCCCCCGCTGCTCTCGCCCCAGTGCCGCTGTCCCAGGGGGACCTCTC
CCAGCCTCGAAAGAAGGACCGAAAGAATAGAAAGTTGGGACCAGGAGGTGGGGCTGGCTTTGGG
GTGCTTCGGAGACCTCGACCAGCTCCTGGGGATGGGGAAAAGCGGTCTCGAATCAAGAAGAGCA
AGAAGCGGAAGTTGAAAAAGGCAGATCGGGGAGATAGACTCCCACCTCCTGGCCCTCCTAGGGC
TCCTCCCAGTGATACAGACTCTGAAGAGGAGGAGGAAGAGGAAGAAGAGGAAGATGATGAGGAA
GAGATGACAGTGGGGGGTGGAGTCCCAGCCCCTGTGCTCCCAACACCCCCTGAGGCCCCCAGGC
CCCCTGTTACAGTGCACTCTGAAGGTGCTCCCCCTACTGACAGTGAAGGCAAAGATGTGGGCAG
CACAGAAACAAGCCAAGATGGAGATGCTAGCTCCAGTGAAGGCGAGATGCGGGTCATGGATGAG
GACATCATGGTAGAATCAGGTGACGACTCCTGGGATCTGATCACGTGTTACTGCAGAAAGCCCT
TTGCGGGGCGGCCCATGATTGAGTGCAGCCTCTGTGGGACGTGGATCCACCTCTCCTGTGCTAA
GATTAAGAAGACCAACGTTCCCGACTTCTTTTATTGCCAGAAATGCAAGGAACTTCGGCCAGAG
GCCCGGCGGTTAGGGGGTCTCCCCAAATCTGGAGAACCCTGACATCACTAAGGCTGGAACTTGT
GACATTACTTGGGAACTGAGCCTCAGGGTCCCCAGCCTTCCCTTGGAGTGAGGAGGCTGTCCCC
ACTTGAGGGCCACAATTCCCAAGGGAGACGTATTTGGAAATGAGTGTCTTCTACTCTGTCCTTC
CTGCTCCATGGACTTGAAGTTGACCCCATTACAGTTGGGTCGGGGAGGCTGGATCTGTAGACAG
AATCTCTGTCCAGTCAACCCTGTACCCTTTTCACTTGCAGGTCCAGGGCTCAAACTGGGATGTA
ATGGGATAGTTGTCTATAAAACTGTAGTGTAAATACAGCACTCCCCTCATGTTTCTTCTCTCTC
CCGTTTACTTTCTTTTACACCGGATGTATTTTTAATTTGGGGCTCCCCCATTTGAGCGAGGTTG
CTCAGAGGTGGAGTACCAAAGCCTGTGGAGTGAGGAAGGAAAGAAAAAGGTGTCAATTAGCACT
CGCCTCGTTTTTAATACTGTTGGCCGGCTGCTCAGACAGACGGCCTGCGTGTTGTAAATAAAGC
AGAGTGGGCTCTTGTGTTTTACA

hide sequence

RefSeq Acc Id:

XM_036157091 ⟹ XP_036012984

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	11	69,887,830 - 69,890,835 (+)	NCBI

Sequence:

show sequence

GGGCTGCAGCTCTTCGCCCGTCCCGGACGCGAAGTAGCGTTGGGGAGTATCCGCCTCCGACTCT
TAAACCAGAGACTCAGCCACCGGAGAAAAGGCGGAGAACCATTGAGGATTTTAACAAATTCTGC
AGTTTTGTCTTGGCCTATGCTGGTTACATCCCCCCTAGCAAAGAGGCTCCTGACAGTGCTACTC
TGCTTGAGAAGATGAAGCTCAAGGACTCTCTTTTTGATCTGGATGGGCCCAAAGTGGCATCTCC
ACTCTCTCCCACATCATTGACGCATACTTCCCGGCCCCCCGCTGCTCTCGCCCCAGTGCCGCTG
TCCCAGGGGGACCTCTCCCAGCCTCGAAAGAAGGACCGAAAGAATAGAAAGTTGGGACCAGGAG
GTGGGGCTGGCTTTGGGGTGCTTCGGAGACCTCGACCAGCTCCTGGGGATGGGGAAAAGCGGTC
TCGAATCAAGAAGAGCAAGAAGCGGAAGTTGAAAAAGGCAGATCGGGGAGATAGACTCCCACCT
CCTGGCCCTCCTAGGGCTCCTCCCAGTGATACAGACTCTGAAGAGGAGGAGGAAGAGGAAGAAG
AGGAAGATGATGAGGAAGAGATGACAGTGGGGGGTGGAGTCCCAGCCCCTGTGCTCCCAACACC
CCCTGAGGCCCCCAGGCCCCCTGTTACAGTGCACTCTGAAGGTGCTCCCCCTACTGACAGTGAA
GGCAAAGATGTGGGCAGCACAGAAACAAGCCAAGATGGAGATGCTAGCTCCAGTGAAGGCGAGA
TGCGGGTCATGGATGAGGACATCATGGTAGAATCAGGTGACGACTCCTGGGATCTGATCACGTG
TTACTGCAGAAAGCCCTTTGCGGGGCGGCCCATGATTGAGTGCAGCCTCTGTGGGACGTGGATC
CACCTCTCCTGTGCTAAGATTAAGAAGACCAACGTTCCCGACTTCTTTTATTGCCAGAAATGCA
AGGAACTTCGGCCAGAGGCCCGGCGGTTAGGGGGTCTCCCCAAATCTGGAGAACCCTGACATCA
CTAAGGCTGGAACTTGTGACATTACTTGGGAACTGAGCCTCAGGGTCCCCAGCCTTCCCTTGGA
GTGAGGAGGCTGTCCCCACTTGAGGGCCACAATTCCCAAGGGAGACGTATTTGGAAATGAGTGT
CTTCTACTCTGTCCTTCCTGCTCCATGGACTTGAAGTTGACCCCATTACAGTTGGGTCGGGGAG
GCTGGATCTGTAGACAGAATCTCTGTCCAGTCAACCCTGTACCCTTTTCACTTGCAGGTCCAGG
GCTCAAACTGGGATGTAATGGGATAGTTGTCTATAAAACTGTAGTGTAAATACAGCACTCCCCT
CATGTTTCTTCTCTCTCCCGTTTACTTTCTTTTACACCGGATGTATTTTTAATTTGGGGCTCCC
CCATTTGAGCGAGGTTGCTCAGAGGTGGAGTACCAAAGCCTGTGGAGTGAGGAAGGAAAGAAAA
AGGTGTCAATTAGCACTCGCCTCGTTTTTAATACTGTTGGCCGGCTGCTCAGACAGACGGCCTG
CGTGTTGTAAATAAAGCAGAGTGGGCTCTTGTGTTTTACA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001278054	(Get FASTA)	NCBI Sequence Viewer
	NP_001278055	(Get FASTA)	NCBI Sequence Viewer
	NP_001278056	(Get FASTA)	NCBI Sequence Viewer
	NP_084340	(Get FASTA)	NCBI Sequence Viewer
	XP_006534564	(Get FASTA)	NCBI Sequence Viewer
	XP_006534565	(Get FASTA)	NCBI Sequence Viewer
	XP_030102287	(Get FASTA)	NCBI Sequence Viewer
	XP_030102288	(Get FASTA)	NCBI Sequence Viewer
	XP_030102289	(Get FASTA)	NCBI Sequence Viewer
	XP_036012984	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH33533	(Get FASTA)	NCBI Sequence Viewer
	AAM44127	(Get FASTA)	NCBI Sequence Viewer
	AAM44128	(Get FASTA)	NCBI Sequence Viewer
	BAB31562	(Get FASTA)	NCBI Sequence Viewer
	BAC25679	(Get FASTA)	NCBI Sequence Viewer
	BAC26426	(Get FASTA)	NCBI Sequence Viewer
	BAC27285	(Get FASTA)	NCBI Sequence Viewer
	BAE41985	(Get FASTA)	NCBI Sequence Viewer
	EDL12514	(Get FASTA)	NCBI Sequence Viewer
	EDL12515	(Get FASTA)	NCBI Sequence Viewer
	EDL12516	(Get FASTA)	NCBI Sequence Viewer
	EDL12517	(Get FASTA)	NCBI Sequence Viewer
	EDL12518	(Get FASTA)	NCBI Sequence Viewer
	EDL12519	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000018716
	ENSMUSP00000018716.4
	ENSMUSP00000099064
	ENSMUSP00000099064.3
	ENSMUSP00000117373.2
	ENSMUSP00000117635.2
	ENSMUSP00000120665
	ENSMUSP00000120665.2
	ENSMUSP00000121780
	ENSMUSP00000121780.2
GenBank Protein	Q8BSN5	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_084340 ⟸ NM_030064
- Peptide Label:	isoform a
- UniProtKB:	Q8CIU9 (UniProtKB/Swiss-Prot), Q8CIU8 (UniProtKB/Swiss-Prot), Q8CIA4 (UniProtKB/Swiss-Prot), Q8CDY2 (UniProtKB/Swiss-Prot), Q8BT31 (UniProtKB/Swiss-Prot), Q3TCH1 (UniProtKB/Swiss-Prot), Q9CWC8 (UniProtKB/Swiss-Prot), Q8BSN5 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MLEAMAEPSPEDPPPTLKPETQPPEKRRRTIEDFNKFCSFVLAYAGYIPPSKEESDWPASGSSS PLRGESAADSDGWDSAPSDLRTIQTFVKKAKSSKRRAVQSGPTQPGPPRSTFSRLQAPDSATLL EKMKLKDSLFDLDGPKVASPLSPTSLTHTSRPPAALAPVPLSQGDLSQPRKKDRKNRKLGPGGG AGFGVLRRPRPAPGDGEKRSRIKKSKKRKLKKADRGDRLPPPGPPRAPPSDTDSEEEEEEEEEE DDEEEMTVGGGVPAPVLPTPPEAPRPPVTVHSEGAPPTDSEGKDVGSTETSQDGDASSSEGEMR VMDEDIMVESGDDSWDLITCYCRKPFAGRPMIECSLCGTWIHLSCAKIKKTNVPDFFYCQKCKE LRPEARRLGGLPKSGEP hide sequence

RefSeq Acc Id:

XP_006534564 ⟸ XM_006534501

- Peptide Label:

isoform X1

- Sequence:

show sequence

MGAEGQRNCGERGRGVGWGSGSGLQLFARPGREVALGSVSLYPPPTLKPETQPPEKRRRTIEDF
NKFCSFVLAYAGYIPPSKEESDWPASGSSSPLRGESAADSDGWDSAPSDLRTIQTFVKKAKSSK
RRAVQSGPTQPGPPRSTFSRLQAPDSATLLEKMKLKDSLFDLDGPKVASPLSPTSLTHTSRPPA
ALAPVPLSQGDLSQPRKKDRKNRKLGPGGGAGFGVLRRPRPAPGDGEKRSRIKKSKKRKLKKAD
RGDRLPPPGPPRAPPSDTDSEEEEEEEEEEDDEEEMTVGGGVPAPVLPTPPEAPRPPVTVHSEG
APPTDSEGKDVGSTETSQDGDASSSEGEMRVMDEDIMVESGDDSWDLITCYCRKPFAGRPMIEC
SLCGTWIHLSCAKIKKTNVPDFFYCQKCKELRPEARRLGGLPKSGEP

hide sequence

RefSeq Acc Id:

XP_006534565 ⟸ XM_006534502

- Peptide Label:

isoform X2

- Sequence:

show sequence

MKLKDSLFDLDGPKVASPLSPTSLTHTSRPPAALAPVPLSQGDLSQPRKKDRKNRKLGPGGGAG
FGVLRRPRPAPGDGEKRSRIKKSKKRKLKKADRGDRLPPPGPPRAPPSDTDSEEEEEEEEEEDD
EEEMTVGGGVPAPVLPTPPEAPRPPVTVHSEGAPPTDSEGKDVGSTETSQDGDASSSEGEMRVM
DEDIMVESGDDSWDLITCYCRKPFAGRPMIECSLCGTWIHLSCAKIKKTNVPDFFYCQKCKELR
PEARRLGGLPKSGEP

hide sequence

RefSeq Acc Id:	NP_001278054 ⟸ NM_001291125
- Peptide Label:	isoform b
- UniProtKB:	Q8BSN5 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MLEAMAEPSPEDPPPTLKPETQPPEKRRRTIEDFNKFCSFVLAYAGYIPPSKEAPDSATLLEKM KLKDSLFDLDGPKVASPLSPTSLTHTSRPPAALAPVPLSQGDLSQPRKKDRKNRKLGPGGGAGF GVLRRPRPAPGDGEKRSRIKKSKKRKLKKADRGDRLPPPGPPRAPPSDTDSEEEEEEEEEEDDE EEMTVGGGVPAPVLPTPPEAPRPPVTVHSEGAPPTDSEGKDVGSTETSQDGDASSSEGEMRVMD EDIMVESGDDSWDLITCYCRKPFAGRPMIECSLCGTWIHLSCAKIKKTNVPDFFYCQKCKELRP EARRLGGLPKSGEP hide sequence

RefSeq Acc Id:	NP_001278055 ⟸ NM_001291126
- Peptide Label:	isoform c
- UniProtKB:	Q8BSN5 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MKLKDSLFDLDGPKVASPLSPTSLTHTSRPPAALAPVPLSQGDLSQPRKKDRKNRKLGPGGGAG FGVLRRPRPAPGDGEKRSRIKKSKKRKLKKADRGDRLPPPGPPRAPPSDTDSEEEEEEEEEEDD EEEMTVGGGVPAPVLPTPPEAPRPPVTVHSEGAPPTDSEGKDVGSTETSQDGDASSSEGEMRVM DEDIMVESGDDSWDLITCYCRKPFAGRPMIECSLCGTWIHLSCAKIKKTNVPDFFYCQKCKELR PEARRLGGLPKSGEP hide sequence

RefSeq Acc Id:	NP_001278056 ⟸ NM_001291127
- Peptide Label:	isoform c
- UniProtKB:	Q8BSN5 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MKLKDSLFDLDGPKVASPLSPTSLTHTSRPPAALAPVPLSQGDLSQPRKKDRKNRKLGPGGGAG FGVLRRPRPAPGDGEKRSRIKKSKKRKLKKADRGDRLPPPGPPRAPPSDTDSEEEEEEEEEEDD EEEMTVGGGVPAPVLPTPPEAPRPPVTVHSEGAPPTDSEGKDVGSTETSQDGDASSSEGEMRVM DEDIMVESGDDSWDLITCYCRKPFAGRPMIECSLCGTWIHLSCAKIKKTNVPDFFYCQKCKELR PEARRLGGLPKSGEP hide sequence

RefSeq Acc Id:	XP_030102288 ⟸ XM_030246428
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_030102287 ⟸ XM_030246427
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_030102289 ⟸ XM_030246429
- Peptide Label:	isoform X3

RefSeq Acc Id:

ENSMUSP00000117635 ⟸ ENSMUST00000138186

RefSeq Acc Id:

ENSMUSP00000117373 ⟸ ENSMUST00000133485

RefSeq Acc Id:

ENSMUSP00000099064 ⟸ ENSMUST00000101526

RefSeq Acc Id:

ENSMUSP00000120665 ⟸ ENSMUST00000135814

RefSeq Acc Id:

ENSMUSP00000121780 ⟸ ENSMUST00000153684

RefSeq Acc Id:

ENSMUSP00000018716 ⟸ ENSMUST00000018716

RefSeq Acc Id:	XP_036012984 ⟸ XM_036157091
- Peptide Label:	isoform X3

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q8BSN5-F1-model_v2	AlphaFold	Q8BSN5	1-401	view protein structure

Promoters

RGD ID:

6821546

Promoter ID:

MM_KWN:8166

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day2, 3T3L1_Day3, 3T3L1_Day4, 3T3L1_Day6, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney, Liver, Lung, MEF_B4, MEF_B6, Spleen

Transcripts:

NM_030064, OTTMUST00000013500, OTTMUST00000013501, OTTMUST00000013502, OTTMUST00000013503, OTTMUST00000013504, OTTMUST00000013505, OTTMUST00000038732, UC007JTI.1

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	11	69,808,611 - 69,810,702 (+)	MPROMDB

RGD ID:

8675276

Promoter ID:

EPDNEW_M15668

Type:

initiation region

Name:

Phf23_1

Description:

Mus musculus PHD finger protein 23 , transcript variant 4, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_M15669

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	11	69,995,850 - 69,995,910	EPDNEW

RGD ID:

8675278

Promoter ID:

EPDNEW_M15669

Type:

initiation region

Name:

Phf23_2

Description:

Mus musculus PHD finger protein 23 , transcript variant 4, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_M15668

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	11	69,997,473 - 69,997,533	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1925496	AgrOrtholog
Ensembl Genes	ENSMUSG00000018572	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000018716	ENTREZGENE
	ENSMUST00000018716.10	UniProtKB/Swiss-Prot
	ENSMUST00000101526	ENTREZGENE
	ENSMUST00000101526.9	UniProtKB/Swiss-Prot
	ENSMUST00000133485.8	UniProtKB/Swiss-Prot
	ENSMUST00000135814	ENTREZGENE
	ENSMUST00000135814.2	UniProtKB/Swiss-Prot
	ENSMUST00000138186.2	UniProtKB/TrEMBL
	ENSMUST00000153684	ENTREZGENE
	ENSMUST00000153684.8	UniProtKB/Swiss-Prot
Gene3D-CATH	3.30.40.10	UniProtKB/Swiss-Prot
InterPro	Znf_FYVE_PHD	UniProtKB/Swiss-Prot
	Znf_PHD	UniProtKB/Swiss-Prot
	Znf_RING/FYVE/PHD	UniProtKB/Swiss-Prot
KEGG Report	mmu:78246	UniProtKB/Swiss-Prot
MGD	MGI:1925496	ENTREZGENE
NCBI Gene	78246	ENTREZGENE
PANTHER	PHD FINGER PROTEIN 23	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	UNCHARACTERIZED	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	PHD_2	UniProtKB/Swiss-Prot
PhenoGen	Phf23	PhenoGen
SMART	PHD	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF57903	UniProtKB/Swiss-Prot
UniProt	B0QZH9_MOUSE	UniProtKB/TrEMBL
	PHF23_MOUSE	UniProtKB/Swiss-Prot
	Q3TCH1	ENTREZGENE
	Q8BSN5	ENTREZGENE
	Q8BT31	ENTREZGENE
	Q8CDY2	ENTREZGENE
	Q8CIA4	ENTREZGENE
	Q8CIU8	ENTREZGENE
	Q8CIU9	ENTREZGENE
	Q9CWC8	ENTREZGENE
UniProt Secondary	Q3TCH1	UniProtKB/Swiss-Prot
	Q8BT31	UniProtKB/Swiss-Prot
	Q8CDY2	UniProtKB/Swiss-Prot
	Q8CIA4	UniProtKB/Swiss-Prot
	Q8CIU8	UniProtKB/Swiss-Prot
	Q8CIU9	UniProtKB/Swiss-Prot
	Q9CWC8	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar