Ticrr (TOPBP1-interacting checkpoint and replication regulator) - Rat Genome Database

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Gene: Ticrr (TOPBP1-interacting checkpoint and replication regulator) Mus musculus
Analyze
Symbol: Ticrr
Name: TOPBP1-interacting checkpoint and replication regulator
RGD ID: 1621459
MGI Page MGI
Description: Predicted to enable chromatin binding activity. Predicted to be involved in DNA replication; mitotic G2/M transition checkpoint; and regulation of DNA-templated DNA replication initiation. Predicted to act upstream of or within DNA repair. Predicted to be located in cytosol and nucleoplasm. Predicted to be active in nucleus. Is expressed in brain ventricular layer and inferior colliculus. Orthologous to human TICRR (TOPBP1 interacting checkpoint and replication regulator).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 5730590G19Rik; 8030425L21; BC028450; cDNA sequence BC028450; leucine-rich repeat kinase 1; Lrrk1; topBP1-interacting, replication-stimulating protein; treslin
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39779,309,944 - 79,347,896 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl779,309,944 - 79,347,896 (+)EnsemblGRCm39 Ensembl
GRCm38779,660,196 - 79,698,148 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl779,660,196 - 79,698,148 (+)EnsemblGRCm38mm10GRCm38
MGSCv37786,805,082 - 86,843,034 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36779,533,709 - 79,571,661 (+)NCBIMGSCv36mm8
Celera777,067,037 - 77,096,906 (+)NCBICelera
Cytogenetic Map7D2NCBI
cM Map745.09NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Mouse MP Annotation Import Pipeline RGD automated import pipeline
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11544199   PMID:12466851   PMID:12477932   PMID:12520002   PMID:12904583   PMID:14610273   PMID:16141072   PMID:16141073  
PMID:20080954   PMID:21267068   PMID:21677750   PMID:21873635   PMID:23201226   PMID:26410627   PMID:38355793  


Genomics

Comparative Map Data
Ticrr
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39779,309,944 - 79,347,896 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl779,309,944 - 79,347,896 (+)EnsemblGRCm39 Ensembl
GRCm38779,660,196 - 79,698,148 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl779,660,196 - 79,698,148 (+)EnsemblGRCm38mm10GRCm38
MGSCv37786,805,082 - 86,843,034 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36779,533,709 - 79,571,661 (+)NCBIMGSCv36mm8
Celera777,067,037 - 77,096,906 (+)NCBICelera
Cytogenetic Map7D2NCBI
cM Map745.09NCBI
TICRR
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381589,575,469 - 89,628,023 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1589,575,469 - 89,631,056 (+)EnsemblGRCh38hg38GRCh38
GRCh371590,118,700 - 90,171,254 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361587,919,822 - 87,972,258 (+)NCBINCBI36Build 36hg18NCBI36
Celera1566,521,348 - 66,573,839 (+)NCBICelera
Cytogenetic Map15q26.1NCBI
HuRef1566,231,687 - 66,284,363 (+)NCBIHuRef
CHM1_11589,959,812 - 90,012,225 (+)NCBICHM1_1
T2T-CHM13v2.01587,331,418 - 87,383,956 (+)NCBIT2T-CHM13v2.0
Ticrr
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81143,006,989 - 143,048,836 (+)NCBIGRCr8
mRatBN7.21133,597,618 - 133,639,513 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1133,597,716 - 133,639,523 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.01141,391,738 - 141,433,615 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1141,391,262 - 141,433,109 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01142,352,601 - 142,394,553 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41135,428,695 - 135,471,349 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11135,514,671 - 135,549,760 (+)NCBI
Celera1125,660,602 - 125,703,125 (+)NCBICelera
Cytogenetic Map1q31NCBI
Ticrr
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541615,572,331 - 15,615,603 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541615,572,789 - 15,615,556 (-)NCBIChiLan1.0ChiLan1.0
TICRR
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21679,126,016 - 79,178,208 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11582,830,314 - 82,882,473 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01568,270,029 - 68,322,201 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11587,476,738 - 87,528,875 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1587,476,738 - 87,528,870 (+)Ensemblpanpan1.1panPan2
TICRR
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1352,584,913 - 52,629,731 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl352,584,454 - 52,629,164 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha355,218,464 - 55,263,804 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0353,000,604 - 53,046,170 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl353,000,601 - 53,046,153 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1352,522,964 - 52,568,260 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0352,733,097 - 52,778,304 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0353,073,123 - 53,118,437 (+)NCBIUU_Cfam_GSD_1.0
Ticrr
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640130,911,256 - 130,953,159 (-)NCBIHiC_Itri_2
SpeTri2.0NW_00493648315,381,486 - 15,422,600 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TICRR
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl755,143,240 - 55,200,640 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1755,142,957 - 55,200,259 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
TICRR
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1298,117,198 - 8,171,956 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605938,641,216 - 38,695,171 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ticrr
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476816,670,390 - 16,715,697 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476816,669,847 - 16,716,335 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ticrr
1097 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:461
Count of miRNA genes:342
Interacting mature miRNAs:388
Transcripts:ENSMUST00000035977
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300722Sle3_msystemic lupus erythmatosus susceptibility 3 (mouse)Not determined7351172887142720Mouse
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
12792978Fbmd3_mfemoral bone mineral density 3, females only (mouse)77050288142367832Mouse
10412199Sst2_msusceptibility to tuberculosis 2 (mouse)Not determined718728794119485380Mouse
1301158Eae4_msusceptibility to experimental allergic encephalomyelitis 4 (mouse)Not determined719147398141919804Mouse
4141805Sle19_msystematic lupus erythematosus susceptibility 19 (mouse)Not determined3003248581135653Mouse
26884404Huml1_mhumerus length 1, 5 week (mouse)730199425108999207Mouse
1301514Rigs1_mradiation induced gastroschisis 1 (mouse)Not determined73628001592394346Mouse
1301082Bbaa16_mB.burgdorferi-associated arthritis 16 (mouse)Not determined736280015116416877Mouse
25314303Vmm4_mvariable multisystem mineralization 4, kidney (mouse)73729942587049208Mouse
1300791Abbp3_mA/J and C57BL/6 blood pressure 3 (mouse)Not determined739673887103510010Mouse
10043926Bw1n_mbody weight 1 in NSY (mouse)Not determined745161966118693530Mouse
1302141Fcsa6_mfemoral cross-sectional area 6 (mouse)Not determined74838446182384607Mouse
11532741Tbrs5_mtuberculosis resistance 5 (mouse)74915922783235415Mouse
1357752Tabw_mtally ho asscoiated body weight (mouse)Not determined74919327883193390Mouse
10053685Eae43_mexperimental allergic encephalomyelitis susceptibility 43 (mouse)Not determined75112495485125093Mouse
10054064Bwq11_mbody weight QTL 11 (mouse)Not determined75112495485125093Mouse
13208555Lgth10_mbody length 10 (mouse)751649748125599172Mouse
12880418V125Dq6_mvitamin D active form serum level QTL 6 (mouse)75214974886149748Mouse
27226751Femd5_mfemur midshaft diameter 5, 10 week (mouse)753249748143153737Mouse
25823170Hrsq7_mhost response to SARS QTL 7, log titer (mouse)754819589116822815Mouse
11565101Tsve1_mvariable short tail (Tsv) enhancer 1 (mouse)75588950887142720Mouse
27226778Femd11_mfemur midshaft diameter 11, 16 week (mouse)756949748134001729Mouse
1300952Hcs1_mhepatocarcinogenesis susceptibility 1 (mouse)Not determined75732612191326352Mouse
1301465Egrm3_mearly growth rate (mouse)Not determined75732612191326352Mouse
1301663Skull9_mskull morphology 9 (mouse)Not determined75732612191326352Mouse
26884408Bzwq13_mbi-zygomatic width QTL 13, 16 week (mouse)761749748121399223Mouse
27095916Scvln15_msacral vertebrae length 2, 16 week (mouse)761749748123699223Mouse
25314305Vmm6_mvariable multisystem mineralization 6, eye (mouse)761849748102749207Mouse
1301383Aem2_manti-erythrocyte autoantibody modifier 2 (mouse)Not determined76413542498135653Mouse
26884381Bzwq2_mbi-zygomatic width QTL 2, 5 week (mouse)76524974896949207Mouse
26884440Sklq4_mskull length QTL 4, 5 week (mouse)765249748126499172Mouse
11553865Stmm1c_mskin tumor modifier of MSM 1c (mouse)76578898699788986Mouse
11553866Stmm1d_mskin tumor modifier of MSM 1d (mouse)76578898699788986Mouse
27095937Ulnl7_mulna length 7, 10 week (mouse)76644974898349207Mouse
12801463Rta1_mretinal aging 1 (mouse)76716802789089989Mouse
1301826Pgia3_mproteoglycan induced arthritis 3 (mouse)Not determined767290094101290240Mouse
1301784Ses2_msalmonella enteritidis susceptibility 2 (mouse)Not determined767290094101290240Mouse
1300620Pgia21_mproteoglycan induced arthritis 21 (mouse)Not determined767290094101290240Mouse
26884418Bzwq7_mbi-zygomatic width QTL 7, 10 week (mouse)767849748105449207Mouse
27226715Metcl3_mmetatarsal-calcaneal length 3, 5 week (mouse)767849748119499223Mouse
26884444Sklq8_mskull length QTL 8, 10 week (mouse)767849748124199223Mouse
26884451Sklq14_mskull length QTL 14, 16 week (mouse)767849748124999172Mouse
1300654Bomd1_mbone mineral density 1 (mouse)Not determined768365595102365702Mouse
27095907Scvln4_msacral vertebrae length 2, 5 week (mouse)769949748120499223Mouse
1301155Bpq7_mblood pressure QTL 7 (mouse)Not determined770143137104143379Mouse
10043973Obq29_mobesity QTL 29 (mouse)Not determined772263372106263372Mouse
4142319Powg_mpost-ovarectomy weight gain (mouse)Not determined7285710592582163Mouse
27095910Pglq13_mpelvic girdle length QTL 13, 16 week (mouse)773049748125699172Mouse
27095933Ulnl3_mulna length 3, 5 week (mouse)773149748143153737Mouse
11553869Stmm2b_mskin tumor modifier of MSM 2a (mouse)773725965107725965Mouse
4142212Png1_mPostnatal growth 1 (mouse)Not determined7432612192394346Mouse
27226745Metcl9_mmetatarsal-calcaneal length 9, 10 week (mouse)774849748122199223Mouse
27226781Tibl3_mtibia length 3, 5 week (mouse)774849748122199223Mouse
1301566Adip3_madiposity 3 (mouse)Not determined775394215109394346Mouse
14746989Manh62_mmandible shape 62 (mouse)775742528109742528Mouse
26884398Humsd6_mhumerus midshaft diameter 6, 16 week (mouse)778649748136901729Mouse

Markers in Region
D7Mit181  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38779,671,770 - 79,671,920UniSTSGRCm38
MGSCv37786,816,656 - 86,816,806UniSTSGRCm37
Celera777,069,881 - 77,070,015UniSTS
Celera777,069,881 - 77,070,598UniSTS
Cytogenetic Map7D3UniSTS
cM Map737.0UniSTS
Whitehead Genetic728.4UniSTS
Whitehead_YAC7 UniSTS
UniSTS:235694  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38779,681,179 - 79,681,384UniSTSGRCm38
MGSCv37786,826,065 - 86,826,270UniSTSGRCm37
Celera1468,318,312 - 68,318,517UniSTS
Celera777,079,981 - 77,080,186UniSTS
Cytogenetic Map7D3UniSTS
5730590G19Rik  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map7D3UniSTS
cM Map7 UniSTS
cM Map745.09UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_029835 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC114988 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC158582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK017879 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK033104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK041726 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK045208 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK051639 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK054492 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK137597 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK157802 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC028450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC058634 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC158103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY731867 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF730550 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN537331 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000035977   ⟹   ENSMUSP00000041377
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl779,309,944 - 79,347,896 (+)Ensembl
GRCm38.p6 Ensembl779,660,196 - 79,698,148 (+)Ensembl
RefSeq Acc Id: ENSMUST00000205750
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl779,309,970 - 79,311,421 (+)Ensembl
GRCm38.p6 Ensembl779,660,222 - 79,661,673 (+)Ensembl
RefSeq Acc Id: ENSMUST00000206017   ⟹   ENSMUSP00000146221
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl779,309,993 - 79,334,236 (+)Ensembl
GRCm38.p6 Ensembl779,660,245 - 79,684,488 (+)Ensembl
RefSeq Acc Id: ENSMUST00000206072
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl779,319,285 - 79,325,461 (+)Ensembl
GRCm38.p6 Ensembl779,669,537 - 79,675,713 (+)Ensembl
RefSeq Acc Id: ENSMUST00000206591   ⟹   ENSMUSP00000145735
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl779,309,995 - 79,343,681 (+)Ensembl
GRCm38.p6 Ensembl779,660,247 - 79,693,933 (+)Ensembl
RefSeq Acc Id: ENSMUST00000206622   ⟹   ENSMUSP00000146155
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl779,309,979 - 79,347,882 (+)Ensembl
GRCm38.p6 Ensembl779,660,231 - 79,698,134 (+)Ensembl
RefSeq Acc Id: ENSMUST00000206677
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl779,320,669 - 79,325,461 (+)Ensembl
GRCm38.p6 Ensembl779,670,921 - 79,675,713 (+)Ensembl
RefSeq Acc Id: NM_029835   ⟹   NP_084111
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39779,309,944 - 79,347,896 (+)NCBI
GRCm38779,660,196 - 79,698,148 (+)ENTREZGENE
MGSCv37786,805,082 - 86,843,034 (+)RGD
Celera777,067,037 - 77,096,906 (+)RGD
cM Map7 ENTREZGENE
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_084111   ⟸   NM_029835
- UniProtKB: Q8C9N4 (UniProtKB/Swiss-Prot),   B2RY55 (UniProtKB/Swiss-Prot),   Q8CCI2 (UniProtKB/Swiss-Prot),   Q8BQ33 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000146221   ⟸   ENSMUST00000206017
RefSeq Acc Id: ENSMUSP00000146155   ⟸   ENSMUST00000206622
RefSeq Acc Id: ENSMUSP00000145735   ⟸   ENSMUST00000206591
RefSeq Acc Id: ENSMUSP00000041377   ⟸   ENSMUST00000035977
Protein Domains
Treslin N-terminal

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8BQ33-F1-model_v2 AlphaFold Q8BQ33 1-1889 view protein structure

Promoters
RGD ID:8664513
Promoter ID:EPDNEW_M10288
Type:initiation region
Name:Ticrr_1
Description:Mus musculus TOPBP1-interacting checkpoint and replication regulator, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38779,660,224 - 79,660,284EPDNEW
RGD ID:6840292
Promoter ID:MM_KWN:51245
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   ES_Cell,   Kidney,   Lung,   MEF_B4,   Spleen
Transcripts:NM_029835
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36786,804,701 - 86,805,201 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1924261 AgrOrtholog
Ensembl Genes ENSMUSG00000046591 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000035977 ENTREZGENE
  ENSMUST00000035977.9 UniProtKB/Swiss-Prot
  ENSMUST00000206017.2 UniProtKB/TrEMBL
  ENSMUST00000206591.2 UniProtKB/TrEMBL
  ENSMUST00000206622.2 UniProtKB/TrEMBL
InterPro Treslin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Treslin_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:77011 UniProtKB/Swiss-Prot
MGD MGI:1924261 ENTREZGENE
NCBI Gene 77011 ENTREZGENE
PANTHER PTHR21556 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TRESLIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Treslin_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ticrr PhenoGen
UniProt A0A0U1RNX1_MOUSE UniProtKB/TrEMBL
  A0A0U1RQ28_MOUSE UniProtKB/TrEMBL
  B2RY55 ENTREZGENE
  Q3UV49_MOUSE UniProtKB/TrEMBL
  Q8BQ33 ENTREZGENE
  Q8BRB3_MOUSE UniProtKB/TrEMBL
  Q8C6J3_MOUSE UniProtKB/TrEMBL
  Q8C9N4 ENTREZGENE
  Q8CCI2 ENTREZGENE
  TICRR_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary B2RY55 UniProtKB/Swiss-Prot
  Q8C9N4 UniProtKB/Swiss-Prot
  Q8CCI2 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-04-05 Ticrr  TOPBP1-interacting checkpoint and replication regulator  BC028450  cDNA sequence BC028450  Data merged from RGD:1318373 737654 PROVISIONAL
2012-09-19 Ticrr  TOPBP1-interacting checkpoint and replication regulator  5730590G19Rik  RIKEN cDNA 5730590G19 gene  Symbol and/or name change 5135510 APPROVED