Sash1 (SAM and SH3 domain containing 1) - Rat Genome Database

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Gene: Sash1 (SAM and SH3 domain containing 1) Mus musculus
Analyze
Symbol: Sash1
Name: SAM and SH3 domain containing 1
RGD ID: 1557371
MGI Page MGI
Description: Predicted to enable G-protein alpha-subunit binding activity; mitogen-activated protein kinase kinase kinase binding activity; and molecular adaptor activity. Predicted to be involved in positive regulation of non-canonical NF-kappaB signal transduction and regulation of epithelial cell migration. Predicted to act upstream of or within several processes, including positive regulation of endothelial cell migration; positive regulation of signal transduction; and regulation of protein ubiquitination. Located in membrane. Human ortholog(s) of this gene implicated in dyschromatosis universalis hereditaria. Orthologous to human SASH1 (SAM and SH3 domain containing 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 1100001C18Rik; 2500002E12Rik; A330076K04Rik; mKIAA0790; putative adapter and scaffold protein 1; SAM and SH3 domain-containing protein 1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39108,597,981 - 8,821,290 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl108,597,983 - 8,761,814 (-)EnsemblGRCm39 Ensembl
GRCm38108,722,217 - 8,945,608 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl108,722,219 - 8,886,070 (-)EnsemblGRCm38mm10GRCm38
MGSCv37108,442,017 - 8,605,868 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36108,412,409 - 8,576,075 (-)NCBIMGSCv36mm8
Celera108,606,870 - 8,773,158 (-)NCBICelera
Cytogenetic Map10A1NCBI
cM Map102.75NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:12520002   PMID:12771949   PMID:12819125   PMID:14610273   PMID:14621295   PMID:15782199   PMID:16137664   PMID:16141072   PMID:16141073  
PMID:16452087   PMID:18799693   PMID:21267068   PMID:21677750   PMID:21873635   PMID:22794259   PMID:22859403   PMID:23776175   PMID:31067462   PMID:38355793  


Genomics

Comparative Map Data
Sash1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39108,597,981 - 8,821,290 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl108,597,983 - 8,761,814 (-)EnsemblGRCm39 Ensembl
GRCm38108,722,217 - 8,945,608 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl108,722,219 - 8,886,070 (-)EnsemblGRCm38mm10GRCm38
MGSCv37108,442,017 - 8,605,868 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36108,412,409 - 8,576,075 (-)NCBIMGSCv36mm8
Celera108,606,870 - 8,773,158 (-)NCBICelera
Cytogenetic Map10A1NCBI
cM Map102.75NCBI
SASH1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh386148,193,468 - 148,552,044 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl6148,272,304 - 148,552,044 (+)EnsemblGRCh38hg38GRCh38
GRCh376148,593,464 - 148,873,180 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 366148,705,422 - 148,914,877 (+)NCBINCBI36Build 36hg18NCBI36
Build 346148,705,421 - 148,914,877NCBI
Celera6149,404,636 - 149,614,083 (+)NCBICelera
Cytogenetic Map6q24.3-q25.1NCBI
HuRef6146,228,564 - 146,437,707 (+)NCBIHuRef
CHM1_16148,927,589 - 149,138,096 (+)NCBICHM1_1
T2T-CHM13v2.06149,389,474 - 149,748,326 (+)NCBIT2T-CHM13v2.0
Sash1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr814,940,207 - 5,238,777 (-)NCBIGRCr8
mRatBN7.213,119,915 - 3,418,536 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl13,121,332 - 3,439,870 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.012,782,905 - 2,950,749 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl12,782,864 - 2,846,200 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.014,467,643 - 4,632,109 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.413,322,905 - 3,486,748 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera11,666,679 - 1,982,045 (-)NCBICelera
Cytogenetic Map1p13NCBI
Sash1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543912,550,273 - 12,839,896 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543912,551,361 - 12,729,500 (-)NCBIChiLan1.0ChiLan1.0
SASH1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v25168,287,588 - 168,574,591 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan16166,254,686 - 166,468,553 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v06146,154,178 - 146,368,101 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.16150,863,677 - 151,075,817 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl6150,863,677 - 151,075,816 (+)Ensemblpanpan1.1panPan2
SASH1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1139,221,243 - 39,478,057 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl139,146,020 - 39,476,914 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha140,063,060 - 40,376,699 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0139,338,888 - 39,653,867 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl139,321,449 - 39,651,475 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1139,334,532 - 39,530,859 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0139,083,215 - 39,397,497 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0139,422,669 - 39,737,198 (+)NCBIUU_Cfam_GSD_1.0
Sash1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404946134,317,060 - 134,488,406 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364891,447,885 - 1,740,400 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364891,569,143 - 1,740,398 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SASH1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl117,306,373 - 17,511,672 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1117,306,364 - 17,663,117 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
SASH1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11323,147,162 - 24,240,008 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1323,147,160 - 23,369,118 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040199,128,646 - 199,411,956 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Sash1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247859,553,982 - 9,854,034 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247859,555,146 - 9,795,638 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Sash1
8594 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:872
Count of miRNA genes:538
Interacting mature miRNAs:625
Transcripts:ENSMUST00000015449
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11532725Sluc44b_msusceptibility to lung cancer 44b (mouse)10126289265Mouse
11532724Sluc44c_msusceptibility to lung cancer 44c (mouse)10126289265Mouse
11532723Sluc44d_msusceptibility to lung cancer 44d (mouse)10126289265Mouse
11532722Sluc44e_msusceptibility to lung cancer 44e (mouse)10126289265Mouse
11532721Sluc44_msusceptibility to lung cancer 44 (mouse)10126289265Mouse
11532720Sluc44a_msusceptibility to lung cancer 44a (mouse)10126289265Mouse
11532718Sluc44f_msusceptibility to lung cancer 44f (mouse)10126289265Mouse
11532717Sluc44g_msusceptibility to lung cancer 44g (mouse)10126289265Mouse
11533917Mts2_mmammary tumor susceptibility 2 (mouse)10126289265Mouse
1300759Geot_mgeotaxia (mouse)Not determined10126289265Mouse
1300881Sluc29_msusceptibility to lung cancer 29 (mouse)Not determined10126289265Mouse
12879494Facq1_mfear acquisition QTL 1 (mouse)10131279130Mouse
15039341Nmrs28_mNAFLD-associated magnetic resonance shift 28 (mouse)1035100134351001Mouse
1357813Ath20_matherosclerosis 20 (mouse)Not determined10328318537283334Mouse
1300790Pgia6_mproteoglycan induced arthritis 6 (mouse)Not determined10381017137810295Mouse
1300997Eae15_msusceptibility to experimental allergic encephalomyelitis 15 (mouse)Not determined10440815438408276Mouse
13208561Wght8_mweight 8 (mouse)10495000043875996Mouse
1302092Ath11_matherosclerosis 11 (mouse)Not determined10615194558693521Mouse
1357740Obsty3_mobesity 3 (mouse)Not determined108235478116190980Mouse
1558865Lith21_mlithogenic gene 21 (mouse)Not determined10852500342525126Mouse

Markers in Region
D10Mit298  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38108,787,531 - 8,787,680UniSTSGRCm38
MGSCv37108,507,329 - 8,507,478UniSTSGRCm37
Celera108,674,115 - 8,674,278UniSTS
Cytogenetic Map10A1UniSTS
cM Map103.0UniSTS
Whitehead Genetic101.1UniSTS
Whitehead/MRC_RH10104.81UniSTS
Whitehead_YAC10 UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_175155 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006512837 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006512839 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006512840 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006512841 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245255 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245256 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245257 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036155989 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036155990 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC091522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC153566 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC153569 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ507736 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK003151 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010852 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK039638 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK041048 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK049453 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK129216 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK149872 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK193372 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK197316 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK204720 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY770549 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ125950 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000015449   ⟹   ENSMUSP00000015449
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl108,597,983 - 8,761,814 (-)Ensembl
GRCm38.p6 Ensembl108,722,219 - 8,886,070 (-)Ensembl
RefSeq Acc Id: ENSMUST00000212553   ⟹   ENSMUSP00000148656
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl108,626,923 - 8,638,238 (-)Ensembl
GRCm38.p6 Ensembl108,751,159 - 8,762,474 (-)Ensembl
RefSeq Acc Id: ENSMUST00000212869   ⟹   ENSMUSP00000148780
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl108,620,363 - 8,632,525 (-)Ensembl
GRCm38.p6 Ensembl108,744,599 - 8,756,761 (-)Ensembl
RefSeq Acc Id: ENSMUST00000213032
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl108,689,486 - 8,761,796 (-)Ensembl
GRCm38.p6 Ensembl108,813,722 - 8,886,052 (-)Ensembl
RefSeq Acc Id: NM_175155   ⟹   NP_780364
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39108,597,983 - 8,761,814 (-)NCBI
GRCm38108,722,219 - 8,886,070 (-)NCBI
MGSCv37108,442,017 - 8,605,868 (-)RGD
Celera108,606,870 - 8,773,158 (-)RGD
cM Map10 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006512837   ⟹   XP_006512900
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39108,597,981 - 8,821,263 (-)NCBI
GRCm38108,722,217 - 8,945,590 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006512839   ⟹   XP_006512902
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39108,597,981 - 8,633,732 (-)NCBI
GRCm38108,722,217 - 8,758,247 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006512840   ⟹   XP_006512903
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39108,597,981 - 8,638,626 (-)NCBI
GRCm38108,722,217 - 8,762,862 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006512841   ⟹   XP_006512904
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39108,597,981 - 8,634,212 (-)NCBI
GRCm38108,722,217 - 8,758,272 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245255   ⟹   XP_030101115
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39108,597,981 - 8,762,133 (-)NCBI
GRCm38108,722,217 - 8,886,480 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245256   ⟹   XP_030101116
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39108,597,981 - 8,821,290 (-)NCBI
GRCm38108,722,217 - 8,945,608 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245257   ⟹   XP_030101117
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39108,597,981 - 8,638,395 (-)NCBI
GRCm38108,722,217 - 8,762,631 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036155989   ⟹   XP_036011882
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39108,597,981 - 8,757,918 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036155990   ⟹   XP_036011883
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39108,597,981 - 8,622,333 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_780364   ⟸   NM_175155
- UniProtKB: P59808 (UniProtKB/Swiss-Prot),   F8VQK5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006512900   ⟸   XM_006512837
- Peptide Label: isoform X4
- UniProtKB: P59808 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006512903   ⟸   XM_006512840
- Peptide Label: isoform X8
- UniProtKB: Q6ZQ46 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006512902   ⟸   XM_006512839
- Peptide Label: isoform X7
- UniProtKB: Q6ZQ46 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006512904   ⟸   XM_006512841
- Peptide Label: isoform X5
- UniProtKB: Q6ZQ46 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030101116   ⟸   XM_030245256
- Peptide Label: isoform X2
- UniProtKB: P59808 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_030101115   ⟸   XM_030245255
- Peptide Label: isoform X1
- UniProtKB: P59808 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_030101117   ⟸   XM_030245257
- Peptide Label: isoform X6
- UniProtKB: Q6ZQ46 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000015449   ⟸   ENSMUST00000015449
RefSeq Acc Id: ENSMUSP00000148656   ⟸   ENSMUST00000212553
RefSeq Acc Id: ENSMUSP00000148780   ⟸   ENSMUST00000212869
RefSeq Acc Id: XP_036011882   ⟸   XM_036155989
- Peptide Label: isoform X3
- UniProtKB: P59808 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_036011883   ⟸   XM_036155990
- Peptide Label: isoform X9
Protein Domains
SAM   SH3

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P59808-F1-model_v2 AlphaFold P59808 1-1230 view protein structure

Promoters
RGD ID:6848577
Promoter ID:MM_TRO:763
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour
Transcripts:MTR019212.10.92.4
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36108,470,436 - 8,470,936 (-)MPROMDB
RGD ID:6819880
Promoter ID:MM_KWN:3508
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day2,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6
Transcripts:NM_175155,   UC007EIV.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36108,605,771 - 8,606,302 (-)MPROMDB
RGD ID:8671472
Promoter ID:EPDNEW_M13767
Type:initiation region
Name:Sash1_1
Description:Mus musculus SAM and SH3 domain containing 1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38108,886,049 - 8,886,109EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1917347 AgrOrtholog
Ensembl Genes ENSMUSG00000015305 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000015449 ENTREZGENE
  ENSMUST00000015449.6 UniProtKB/TrEMBL
  ENSMUST00000212553.2 UniProtKB/TrEMBL
  ENSMUST00000212869.2 UniProtKB/TrEMBL
Gene3D-CATH 1.10.150.50 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3 Domains UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro rSAM/SH3_domain-containing UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SAM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SAM/pointed_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SASH1_SAM_repeat1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SASH1_SAM_repeat2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SASH1_SH3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:70097 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1917347 ENTREZGENE
NCBI Gene 70097 ENTREZGENE
PANTHER SAM AND SH3 DOMAIN-CONTAINING PROTEIN 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SAM-DOMAIN, SH3 AND NUCLEAR LOCALIZATION SIGNALS PROTEIN RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam SAM_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SAM_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SLY UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Sash1 PhenoGen
PROSITE SAM_DOMAIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART SAM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF47769 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF50044 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A1D5RM71_MOUSE UniProtKB/TrEMBL
  A0A1D5RMH4_MOUSE UniProtKB/TrEMBL
  F8VQK5 ENTREZGENE, UniProtKB/TrEMBL
  P59808 ENTREZGENE
  Q6ZQ46 ENTREZGENE, UniProtKB/TrEMBL
  Q8BRY6_MOUSE UniProtKB/TrEMBL
  SASH1_MOUSE UniProtKB/Swiss-Prot