Or4n5 (olfactory receptor family 4 subfamily N member 5) - Rat Genome Database

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Gene: Or4n5 (olfactory receptor family 4 subfamily N member 5) Mus musculus
Analyze
Symbol: Or4n5
Name: olfactory receptor family 4 subfamily N member 5
RGD ID: 1553799
MGI Page MGI
Description: Predicted to enable olfactory receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway and sensory perception of smell. Predicted to be located in membrane. Predicted to be active in plasma membrane. Orthologous to human OR4N5 (olfactory receptor family 4 subfamily N member 5).
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: GA_x6K02T2PMLR-5566715-5565789; MOR241; MOR241-3; olfactory receptor 722; olfactory receptor MOR241-3; Olfr722
RGD Orthologs
Human
Rat
Bonobo
Dog
Pig
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391450,131,715 - 50,139,398 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1450,131,715 - 50,139,456 (-)EnsemblGRCm39 Ensembl
GRCm381449,894,258 - 49,901,941 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1449,894,258 - 49,901,999 (-)EnsemblGRCm38mm10GRCm38
MGSCv371450,513,933 - 50,521,616 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361448,816,209 - 48,823,892 (-)NCBIMGSCv36mm8
Celera1446,106,005 - 46,113,652 (-)NCBICelera
Cytogenetic Map14C1NCBI
cM Map1425.87NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:11802173   PMID:11875048   PMID:12477932   PMID:14611657   PMID:16602821   PMID:21873635   PMID:32295537  


Genomics

Comparative Map Data
Or4n5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391450,131,715 - 50,139,398 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1450,131,715 - 50,139,456 (-)EnsemblGRCm39 Ensembl
GRCm381449,894,258 - 49,901,941 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1449,894,258 - 49,901,999 (-)EnsemblGRCm38mm10GRCm38
MGSCv371450,513,933 - 50,521,616 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361448,816,209 - 48,823,892 (-)NCBIMGSCv36mm8
Celera1446,106,005 - 46,113,652 (-)NCBICelera
Cytogenetic Map14C1NCBI
cM Map1425.87NCBI
OR4N5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381420,138,820 - 20,145,471 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1420,138,820 - 20,145,471 (+)EnsemblGRCh38hg38GRCh38
GRCh371420,606,979 - 20,613,630 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361419,681,735 - 19,682,661 (+)NCBINCBI36Build 36hg18NCBI36
Build 341419,681,734 - 19,682,661NCBI
Celera14473,483 - 474,409 (+)NCBICelera
Cytogenetic Map14q11.2NCBI
HuRef14733,765 - 734,691 (+)NCBIHuRef
CHM1_11420,612,963 - 20,613,889 (+)NCBICHM1_1
T2T-CHM13v2.01414,333,608 - 14,340,261 (+)NCBIT2T-CHM13v2.0
Or4n5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81525,647,331 - 25,648,257 (-)NCBIGRCr8
mRatBN7.21523,167,750 - 23,168,676 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1523,166,235 - 23,174,805 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1525,945,006 - 25,945,932 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01526,906,359 - 26,907,285 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01525,153,556 - 25,154,482 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01526,780,039 - 26,780,965 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1526,780,039 - 26,780,965 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01530,704,833 - 30,705,759 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41526,395,468 - 26,396,394 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11526,411,167 - 26,412,094 (-)NCBI
Celera1523,530,039 - 23,530,965 (-)NCBICelera
Cytogenetic Map15p14NCBI
LOC100969123
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21521,679,596 - 21,680,522 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11420,896,086 - 20,897,012 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0141,044,704 - 1,045,630 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11419,108,400 - 19,109,325 (+)NCBIpanpan1.1PanPan1.1panPan2
OR4N5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.130590,601 - 592,858 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl30591,511 - 592,437 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha30636,337 - 637,263 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.030688,094 - 689,020 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl30688,094 - 689,020 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.130637,125 - 638,051 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.030733,102 - 734,028 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.030866,065 - 866,991 (-)NCBIUU_Cfam_GSD_1.0
LOC100152712
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1779,379,088 - 79,380,023 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2783,904,483 - 83,949,871 (-)NCBISscrofa10.2Sscrofa10.2susScr3

Variants

.
Variants in Or4n5
177 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:114
Count of miRNA genes:102
Interacting mature miRNAs:104
Transcripts:ENSMUST00000053290
Prediction methods:Miranda
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301372Sluc13_msusceptibility to lung cancer 13 (mouse)Not determined141882760452827726Mouse
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420887473121269804Mouse
1357527Epfpq1_mepididymal fat percentage QTL 1 (mouse)Not determined142106245071885801Mouse
14746973Manh76_mmandible shape 76 (mouse)142228721756287217Mouse
4142485Modor2_mmodifier of ocular retardation 2 (mouse)Not determined142492624858179769Mouse
13506929Recrq10_mrecombination rate in male meiosis QTL 10 (mouse)142792195761137449Mouse
10043886Cia49_mcollagen induced arthritis QTL 49 (mouse)Not determined142999699463997133Mouse
27226744Metcl6_mmetatarsal-calcaneal length 6, 5 week (mouse)143032195752937457Mouse
27226774Tibl15_mtibia length 15, 10 week (mouse)143032195787937436Mouse
1300909Ath13_matherosclerosis 13 (mouse)Not determined143033525064335381Mouse
1300998Cia17_mcollagen induced arthritis 17 (mouse)Not determined143033525064335381Mouse
27226737Metcl12_mmetatarsal-calcaneal length 12, 10 week (mouse)143322195759437449Mouse
27226727Tibl21_mtibia length 21, 16 week (mouse)143412195752937457Mouse
1300625Cosz2_mcocaine seizure 2 (mouse)Not determined143504579768785736Mouse
10043887Cia50_mcollagen induced arthritis QTL 50 (mouse)Not determined143743018571430320Mouse
4142419Tgq26_mtriglyceride QTL 26 (mouse)Not determined4033731974337319Mouse
1301777Bglq15_mbody growth late QTL 15 (mouse)Not determined144296241676962593Mouse
1301424Skull21_mskull morphology 21 (mouse)Not determined144296241676962593Mouse
1300805Mors3_mmodifier of obesity related sterility 3 (mouse)Not determined144303727077037418Mouse
1301091Bbaa21_mB.burgdorferi-associated arthritis 21 (mouse)Not determined144306584777066045Mouse
4141400Nilac8_mnicotine induced locomotor activity 8 (mouse)Not determined144306584777066045Mouse
4141484Hcbip1_mhexachlorobenzene induced porphyria 1 (mouse)Not determined4733525059962593Mouse
1300605El5_mepilepsy 5 (mouse)Not determined144945542583455556Mouse


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000053290   ⟹   ENSMUSP00000059721
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1450,131,715 - 50,139,398 (-)Ensembl
GRCm38.p6 Ensembl1449,894,258 - 49,901,941 (-)Ensembl
RefSeq Acc Id: ENSMUST00000213271
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1450,131,715 - 50,139,456 (-)Ensembl
GRCm38.p6 Ensembl1449,894,258 - 49,901,999 (-)Ensembl
RefSeq Acc Id: NM_146494   ⟹   NP_666705
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391450,131,715 - 50,139,398 (-)NCBI
GRCm381449,894,258 - 49,901,941 (-)ENTREZGENE
MGSCv371450,513,933 - 50,521,616 (-)RGD
Celera1446,106,005 - 46,113,652 (-)RGD
cM Map14 ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_666705 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH51403 (Get FASTA)   NCBI Sequence Viewer  
  AAL61266 (Get FASTA)   NCBI Sequence Viewer  
  AAP71185 (Get FASTA)   NCBI Sequence Viewer  
  EDL20793 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000059721
  ENSMUSP00000059721.7
Reference Protein Sequences
RefSeq Acc Id: NP_666705   ⟸   NM_146494
- UniProtKB: Q8VFC8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000059721   ⟸   ENSMUST00000053290
Protein Domains
G-protein coupled receptors family 1 profile

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8VFC8-F1-model_v2 AlphaFold Q8VFC8 1-308 view protein structure


Additional Information

Database Acc Id Source(s)
AGR Gene MGI:3030556 AgrOrtholog
Ensembl Genes ENSMUSG00000048933 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000053290 ENTREZGENE
  ENSMUST00000053290.8 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro 7TM_GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_supfam UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
KEGG Report mmu:258487 UniProtKB/TrEMBL
MGD MGI:3030556 ENTREZGENE
NCBI Gene 258487 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/TrEMBL
  OLFACTORY RECEPTOR 4N5 UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PhenoGen Or4n5 PhenoGen
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt Q8VFC8 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-05-24 Or4n5  olfactory receptor family 4 subfamily N member 5  Olfr722  olfactory receptor 722  Symbol and/or name change 5135510 APPROVED