Zbtb44 (zinc finger and BTB domain containing 44) - Rat Genome Database

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Gene: Zbtb44 (zinc finger and BTB domain containing 44) Mus musculus
Analyze
Symbol: Zbtb44
Name: zinc finger and BTB domain containing 44
RGD ID: 1552909
MGI Page MGI
Description: Predicted to enable DNA binding activity and metal ion binding activity. Predicted to be located in nucleus. Is expressed in several structures, including central nervous system; early conceptus; and genitourinary system. Orthologous to human ZBTB44 (zinc finger and BTB domain containing 44).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 6030404E16Rik; BC038156; BTB (POZ) domain containing 15; BTB/POZ domain-containing protein 15; Btbd15; cDNA sequence BC038156; E230011F09; zinc finger and BTB domain-containing protein 44
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Gm4813  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39930,941,016 - 30,987,181 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl930,941,940 - 30,987,181 (+)EnsemblGRCm39 Ensembl
GRCm38931,029,720 - 31,075,885 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl931,030,644 - 31,075,885 (+)EnsemblGRCm38mm10GRCm38
MGSCv37930,838,229 - 30,883,470 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36930,780,209 - 30,819,776 (+)NCBIMGSCv36mm8
Celera928,289,333 - 28,335,081 (+)NCBICelera
Cytogenetic Map9A4NCBI
cM Map916.56NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-demecolcine  (ISO)
1,2-dichloroethane  (EXP)
1,2-dimethylhydrazine  (EXP)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
3,3',4,4'-tetrachlorobiphenyl  (EXP)
4,4'-sulfonyldiphenol  (EXP)
6-propyl-2-thiouracil  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
amitrole  (ISO)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
avobenzone  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[e]pyrene  (ISO)
bisphenol A  (EXP,ISO)
butanal  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
caffeine  (ISO)
carbon nanotube  (EXP)
CGP 52608  (ISO)
chlorpyrifos  (EXP)
cobalt dichloride  (ISO)
cyclosporin A  (ISO)
dibutyl phthalate  (EXP)
dioxygen  (EXP)
disodium selenite  (ISO)
diuron  (ISO)
dorsomorphin  (ISO)
elemental selenium  (ISO)
fenthion  (EXP)
FR900359  (ISO)
furan  (ISO)
gentamycin  (ISO)
indometacin  (ISO)
isoprenaline  (EXP)
maneb  (EXP)
methapyrilene  (ISO)
methidathion  (EXP)
methimazole  (ISO)
methylmercury chloride  (ISO)
paracetamol  (ISO)
paraquat  (EXP)
perfluorooctane-1-sulfonic acid  (EXP)
phenacetin  (ISO)
phenobarbital  (EXP)
phenylhydrazine  (ISO)
phenylmercury acetate  (ISO)
PhIP  (ISO)
pinosylvin  (ISO)
pirinixic acid  (EXP)
propiconazole  (EXP)
pyridaben  (EXP)
SB 431542  (ISO)
selenium atom  (ISO)
sodium arsenite  (ISO)
sulfadimethoxine  (ISO)
sunitinib  (ISO)
temozolomide  (ISO)
trans-pinosylvin  (ISO)
triptonide  (EXP)
troglitazone  (EXP)
urethane  (ISO)
valproic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleus  (IEA)

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Mouse brain organization revealed through direct genome-scale TF expression analysis. Gray PA, etal., Science 2004 Dec 24;306(5705):2255-7.
2. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:12477932   PMID:12520002   PMID:12904583   PMID:14610273   PMID:15489334   PMID:15741177   PMID:16141072   PMID:16141073  
PMID:17967808   PMID:18287559   PMID:18799693   PMID:18973680   PMID:20412781   PMID:21267068   PMID:21677750   PMID:34351428   PMID:38355793  


Genomics

Comparative Map Data
Zbtb44
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39930,941,016 - 30,987,181 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl930,941,940 - 30,987,181 (+)EnsemblGRCm39 Ensembl
GRCm38931,029,720 - 31,075,885 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl931,030,644 - 31,075,885 (+)EnsemblGRCm38mm10GRCm38
MGSCv37930,838,229 - 30,883,470 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36930,780,209 - 30,819,776 (+)NCBIMGSCv36mm8
Celera928,289,333 - 28,335,081 (+)NCBICelera
Cytogenetic Map9A4NCBI
cM Map916.56NCBI
ZBTB44
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3811130,226,677 - 130,314,917 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl11130,226,677 - 130,314,917 (-)EnsemblGRCh38hg38GRCh38
GRCh3711130,096,572 - 130,184,812 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3611129,608,335 - 129,689,817 (-)NCBINCBI36Build 36hg18NCBI36
Celera11127,264,450 - 127,352,483 (-)NCBICelera
Cytogenetic Map11q24.3NCBI
HuRef11126,049,248 - 126,084,496 (-)NCBIHuRef
CHM1_111129,982,379 - 130,070,414 (-)NCBICHM1_1
T2T-CHM13v2.011130,262,483 - 130,350,761 (-)NCBIT2T-CHM13v2.0
Zbtb44
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8837,724,237 - 37,782,220 (+)NCBIGRCr8
mRatBN7.2829,466,055 - 29,524,027 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl829,466,352 - 29,518,163 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx833,535,723 - 33,587,518 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0831,830,117 - 31,881,915 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0829,698,088 - 29,749,760 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0832,165,388 - 32,223,341 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl832,165,810 - 32,217,476 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0832,191,422 - 32,248,945 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4830,841,899 - 30,894,133 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1830,850,442 - 30,921,405 (+)NCBI
Celera830,928,937 - 30,979,901 (+)NCBICelera
Cytogenetic Map8q13NCBI
Zbtb44
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541231,147,147 - 31,205,226 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541231,146,620 - 31,205,226 (-)NCBIChiLan1.0ChiLan1.0
ZBTB44
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v29130,904,391 - 130,992,454 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan111132,015,072 - 132,103,110 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v011125,037,645 - 125,125,711 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.111128,929,819 - 129,017,533 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl11128,929,826 - 128,964,790 (-)Ensemblpanpan1.1panPan2
ZBTB44
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.154,574,604 - 4,641,431 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl54,574,243 - 4,635,066 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha54,634,397 - 4,702,362 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.054,534,775 - 4,601,607 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl54,535,991 - 4,595,515 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.154,568,897 - 4,635,604 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.054,577,604 - 4,644,363 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.054,604,461 - 4,671,747 (+)NCBIUU_Cfam_GSD_1.0
Zbtb44
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947112,330,715 - 112,397,948 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365722,052,408 - 2,113,821 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365722,052,408 - 2,117,120 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZBTB44
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl956,947,391 - 57,017,791 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1956,947,145 - 57,018,803 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2963,071,002 - 63,152,634 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ZBTB44
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11121,317,527 - 121,382,608 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660434,725,695 - 4,800,607 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Zbtb44
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248124,631,468 - 4,694,218 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Zbtb44
1474 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1915
Count of miRNA genes:792
Interacting mature miRNAs:1022
Transcripts:ENSMUST00000115222, ENSMUST00000167346
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
12790993Adq1_maortic diameter QTL 1 (mouse)91574962749749627Mouse
11354951Pdcc3_mplasmacytoid dentritic cell compartment 3 (mouse)91574962749749627Mouse
1357465Vtbt6_mvertebral trabecular bone trait 6 (mouse)Not determined91697884050978943Mouse
10043847Hdlq89_mHDL QTL 89 (mouse)Not determined92929292963293072Mouse
4141447Cfmq2_mcystic fibrosis modifier QTL 2 (mouse)Not determined91541175149411890Mouse
11532696Sluc39c_msusceptibility to lung cancer 39c (mouse)92558748559587581Mouse
10043867Mtbcq9_mmultiple trait body composition QTL 9 (mouse)Not determined92679642160796552Mouse
1301421Lgth4_mbody length 4 (mouse)Not determined91541175149411890Mouse
13504834Hdlq109_mHDL QTL 109 (mouse)91670964150709641Mouse
1301365Ap5q_malcohol preference 5 QTL (mouse)Not determined93005316464053277Mouse
12880415V125Dq7_mvitamin D active form serum level QTL 7 (mouse)91601129650011296Mouse
13208563Bmiq8_mbody mass index QTL 8 (mouse)92491129668907282Mouse
1357746Vtbt7_mvertebral trabecular bone trait 7 (mouse)Not determined93073991564740021Mouse
4141591Cq4_mcholesterol QTL 4 (mouse)Not determined91541175149411890Mouse
11532712Sluc39d_msusceptibility to lung cancer 39d (mouse)92558748559587581Mouse
12790997Adq2_maortic diameter QTL 2 (mouse)91574962749749627Mouse
10043987Stheal13_msoft tissue heal 13 (mouse)Not determined92679642160796552Mouse
1558949Igan3_mIgA nephropathy 3 (mouse)Not determined93041469440565914Mouse
13504833Bglu19_mblood glucose level 19 (mouse)9991076843910768Mouse
1301045Sluc10_msusceptibility to lung cancer 10 (mouse)Not determined92030619754306370Mouse
4142352Lmr17_mleishmaniasis resistance 17 (mouse)Not determined92030619754306370Mouse
1301883Skull12_mskull morphology 12 (mouse)Not determined92030619754306370Mouse
1301000Obq5_mobesity QTL 5 (mouse)Not determined92850333341799326Mouse
1300849Sles4_msystemic lupus erythmatosus suppressor 4 (mouse)Not determined9910756237306370Mouse
1300932Hdlq17_mHDL QTL 17 (mouse)Not determined92679642160796552Mouse
12880416V125Dq8_mvitamin D active form serum level QTL 8 (mouse)91601129650011296Mouse
11532695Sluc39b_msusceptibility to lung cancer 39b (mouse)92558748559587581Mouse
12904939Edlmmq8_mextensor digitorum longus muscle mass QTL 8 (mouse)92085274054852740Mouse
10043878Adip20_madiposity 20 (mouse)Not determined92725119461251323Mouse
1357637Si5lq2_mserum IGFBP-5 level QTL 2 (mouse)Not determined91541175149411890Mouse
14700787Ncdq1_mnevus cell density QTL 1 (mouse)92811129636111296Mouse
10043917Obq37_mobesity QTL 37 (mouse)Not determined91339117547391175Mouse
10043950Pbft5_mpercent body fat 5 (mouse)Not determined92030619754306370Mouse
1301782Chol11_mcholesterol 11 (mouse)Not determined92929292963293072Mouse
1300643Pvcan2_mprotection against vaginal candidiasis 2 (mouse)Not determined91994340653943525Mouse
11532694Sluc39a_msusceptibility to lung cancer 39a (mouse)92558748559587581Mouse
1300532Tbs2_mtuberculosis severity 2 (mouse)Not determined91236997046370114Mouse
1301439Morph2_mmorphine antinociception 2 (mouse)Not determined92015336254153492Mouse

Markers in Region
BB253507  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38931,029,003 - 31,029,118UniSTSGRCm38
MGSCv37930,836,588 - 30,836,703UniSTSGRCm37
Celera928,287,692 - 28,287,807UniSTS
Cytogenetic Map9A4UniSTS
Whitehead/MRC_RH9322.81UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001115130 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_172765 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006510215 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006510216 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006510217 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154869 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK020046 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK036895 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK053995 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK153955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK162427 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AV279920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC037671 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC038156 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC090965 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT025653 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000115222   ⟹   ENSMUSP00000110877
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl930,941,942 - 30,987,181 (+)Ensembl
GRCm38.p6 Ensembl931,030,646 - 31,075,885 (+)Ensembl
RefSeq Acc Id: ENSMUST00000167346   ⟹   ENSMUSP00000133109
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl930,964,592 - 30,980,051 (+)Ensembl
GRCm38.p6 Ensembl931,053,296 - 31,068,755 (+)Ensembl
RefSeq Acc Id: ENSMUST00000213202   ⟹   ENSMUSP00000150226
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl930,965,548 - 30,968,413 (+)Ensembl
GRCm38.p6 Ensembl931,054,252 - 31,057,117 (+)Ensembl
RefSeq Acc Id: ENSMUST00000214585   ⟹   ENSMUSP00000149121
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl930,964,603 - 30,980,887 (+)Ensembl
GRCm38.p6 Ensembl931,053,307 - 31,069,591 (+)Ensembl
RefSeq Acc Id: ENSMUST00000216649   ⟹   ENSMUSP00000149386
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl930,941,940 - 30,981,529 (+)Ensembl
GRCm38.p6 Ensembl931,030,644 - 31,070,233 (+)Ensembl
RefSeq Acc Id: ENSMUST00000217092   ⟹   ENSMUSP00000149969
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl930,964,535 - 30,980,887 (+)Ensembl
GRCm38.p6 Ensembl931,053,239 - 31,069,591 (+)Ensembl
RefSeq Acc Id: NM_001115130   ⟹   NP_001108602
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39930,941,940 - 30,987,181 (+)NCBI
GRCm38931,030,644 - 31,075,885 (+)NCBI
MGSCv37930,838,229 - 30,883,470 (+)RGD
Celera928,289,333 - 28,335,081 (+)RGD
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_172765   ⟹   NP_766353
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39930,941,940 - 30,987,181 (+)NCBI
GRCm38931,030,644 - 31,075,885 (+)NCBI
MGSCv37930,838,229 - 30,883,470 (+)RGD
Celera928,289,333 - 28,335,081 (+)RGD
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006510215   ⟹   XP_006510278
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39930,941,016 - 30,986,133 (+)NCBI
GRCm38931,029,720 - 31,075,882 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006510216   ⟹   XP_006510279
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39930,941,655 - 30,986,133 (+)NCBI
GRCm38931,030,177 - 31,075,882 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006510217   ⟹   XP_006510280
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39930,941,655 - 30,986,133 (+)NCBI
GRCm38931,030,177 - 31,075,882 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036154869   ⟹   XP_036010762
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39930,941,655 - 30,986,133 (+)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_766353   ⟸   NM_172765
- Peptide Label: isoform b
- UniProtKB: Q8R0A2 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001108602   ⟸   NM_001115130
- Peptide Label: isoform a
- UniProtKB: Q8CB31 (UniProtKB/Swiss-Prot),   Q8R0A2 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006510279   ⟸   XM_006510216
- Peptide Label: isoform X2
- UniProtKB: A0A1L1SQN1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006510280   ⟸   XM_006510217
- Peptide Label: isoform X3
- UniProtKB: A0A1L1SQN1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006510278   ⟸   XM_006510215
- Peptide Label: isoform X1
- UniProtKB: A0A1L1SSL7 (UniProtKB/TrEMBL),   A0A1L1SQN1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000149969   ⟸   ENSMUST00000217092
RefSeq Acc Id: ENSMUSP00000149386   ⟸   ENSMUST00000216649
RefSeq Acc Id: ENSMUSP00000150226   ⟸   ENSMUST00000213202
RefSeq Acc Id: ENSMUSP00000110877   ⟸   ENSMUST00000115222
RefSeq Acc Id: ENSMUSP00000133109   ⟸   ENSMUST00000167346
RefSeq Acc Id: ENSMUSP00000149121   ⟸   ENSMUST00000214585
RefSeq Acc Id: XP_036010762   ⟸   XM_036154869
- Peptide Label: isoform X4
Protein Domains
BTB   C2H2-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8R0A2-F1-model_v2 AlphaFold Q8R0A2 1-453 view protein structure

Promoters
RGD ID:8669104
Promoter ID:EPDNEW_M12583
Type:initiation region
Name:Zbtb44_1
Description:Mus musculus zinc finger and BTB domain containing 44 , transcriptvariant b, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M12584  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38931,030,683 - 31,030,743EPDNEW
RGD ID:8669106
Promoter ID:EPDNEW_M12584
Type:multiple initiation site
Name:Zbtb44_2
Description:Mus musculus zinc finger and BTB domain containing 44 , transcriptvariant b, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M12583  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38931,041,888 - 31,041,948EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1925123 AgrOrtholog
Ensembl Genes ENSMUSG00000047412 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000115222 ENTREZGENE
  ENSMUST00000115222.10 UniProtKB/Swiss-Prot
  ENSMUST00000167346.2 UniProtKB/Swiss-Prot
  ENSMUST00000213202.2 UniProtKB/TrEMBL
  ENSMUST00000214585 ENTREZGENE
  ENSMUST00000214585.2 UniProtKB/TrEMBL
  ENSMUST00000216649 ENTREZGENE
  ENSMUST00000216649.2 UniProtKB/Swiss-Prot
  ENSMUST00000217092 ENTREZGENE
  ENSMUST00000217092.2 UniProtKB/TrEMBL
Gene3D-CATH Classic Zinc Finger UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro BTB/POZ_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SKP1/BTB/POZ_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:235132 UniProtKB/Swiss-Prot
MGD MGI:1925123 ENTREZGENE
NCBI Gene 235132 ENTREZGENE
PANTHER AGAP004733-PA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZINC FINGER AND BTB DOMAIN-CONTAINING PROTEIN 44 UniProtKB/TrEMBL
  ZINC FINGER AND BTB DOMAIN-CONTAINING PROTEIN 44 ISOFORM X1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZINC FINGER PROTEIN UniProtKB/TrEMBL
Pfam BTB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  zf-C2H2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Zbtb44 PhenoGen
PROSITE BTB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART BTB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZnF_C2H2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF54695 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF57667 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A1L1SQN1 ENTREZGENE, UniProtKB/TrEMBL
  A0A1L1SSL7 ENTREZGENE, UniProtKB/TrEMBL
  A0A1L1ST93_MOUSE UniProtKB/TrEMBL
  Q3TRW7_MOUSE UniProtKB/TrEMBL
  Q8C6R6_MOUSE UniProtKB/TrEMBL
  Q8CB31 ENTREZGENE
  Q8R0A2 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q8CB31 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-04-28 Zbtb44  zinc finger and BTB domain containing 44  BC038156  cDNA sequence BC038156  Data merged from RGD:1615586 737654 PROVISIONAL