Or4m1 (olfactory receptor family 4 subfamily M member 1) - Rat Genome Database

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Gene: Or4m1 (olfactory receptor family 4 subfamily M member 1) Mus musculus
Analyze
Symbol: Or4m1
Name: olfactory receptor family 4 subfamily M member 1
RGD ID: 1552184
MGI Page MGI
Description: Enables olfactory receptor activity. Involved in several processes, including glucose homeostasis; positive regulation of appetite; and positive regulation of flagellated sperm motility. Is active in plasma membrane. Is expressed in olfactory epithelium. Orthologous to several human genes including OR4M1 (olfactory receptor family 4 subfamily M member 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: GA_x6K02T2PMLR-6013665-6012724; MOR242; MOR242-1; olfactory receptor 4M1; olfactory receptor 734; olfactory receptor MOR242-1; Olfr734
RGD Orthologs
Human
Rat
Chinchilla
Squirrel
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391450,557,293 - 50,558,325 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1450,553,963 - 50,564,218 (-)EnsemblGRCm39 Ensembl
GRCm381450,319,836 - 50,320,868 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1450,316,506 - 50,326,761 (-)EnsemblGRCm38mm10GRCm38
MGSCv371450,939,567 - 50,940,508 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361449,241,843 - 49,242,784 (-)NCBIMGSCv36mm8
Celera1446,553,556 - 46,554,497 (-)NCBICelera
Cytogenetic Map14C1NCBI
cM Map1426.05NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
membrane  (ISA)
plasma membrane  (IBA,IDA,ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:11802173   PMID:11875048   PMID:12477932   PMID:14611657   PMID:16602821   PMID:21267068   PMID:21873635   PMID:31230984   PMID:31798959   PMID:32295537   PMID:32337066  


Genomics

Comparative Map Data
Or4m1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391450,557,293 - 50,558,325 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1450,553,963 - 50,564,218 (-)EnsemblGRCm39 Ensembl
GRCm381450,319,836 - 50,320,868 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1450,316,506 - 50,326,761 (-)EnsemblGRCm38mm10GRCm38
MGSCv371450,939,567 - 50,940,508 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361449,241,843 - 49,242,784 (-)NCBIMGSCv36mm8
Celera1446,553,556 - 46,554,497 (-)NCBICelera
Cytogenetic Map14C1NCBI
cM Map1426.05NCBI
OR4M1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381419,773,504 - 19,783,696 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1419,773,504 - 19,783,696 (+)EnsemblGRCh38hg38GRCh38
GRCh371420,241,663 - 20,251,855 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361419,318,322 - 19,319,263 (+)NCBINCBI36Build 36hg18NCBI36
Build 341419,318,321 - 19,319,263NCBI
Celera14113,936 - 114,877 (+)NCBICelera
Cytogenetic Map14q11.2NCBI
HuRef14374,754 - 375,695 (+)NCBIHuRef
CHM1_11420,249,938 - 20,250,879 (+)NCBICHM1_1
T2T-CHM13v2.01413,972,933 - 13,983,132 (+)NCBIT2T-CHM13v2.0
Or4m1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81525,980,799 - 25,981,740 (-)NCBIGRCr8
mRatBN7.21523,507,213 - 23,508,154 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1523,507,213 - 23,508,154 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1526,278,486 - 26,279,427 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01527,239,804 - 27,240,745 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01525,487,028 - 25,487,969 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01527,139,716 - 27,140,657 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1527,139,716 - 27,140,657 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01531,066,249 - 31,067,190 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41526,032,642 - 26,033,583 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11526,048,341 - 26,049,283 (-)NCBI
Celera1523,839,131 - 23,840,072 (-)NCBICelera
Cytogenetic Map15p14NCBI
LOC102015988
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_004955550587,951 - 588,914 (-)NCBIChiLan1.0ChiLan1.0
LOC101958842
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864077,113,377 - 77,115,397 (-)NCBIHiC_Itri_2
SpeTri2.0NW_00493687795,426 - 96,548 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LOC100153496
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa10.2784,148,577 - 84,158,463 (-)NCBISscrofa10.2Sscrofa10.2susScr3
LOC101715193
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248255,519,839 - 5,520,768 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Or4m1
18 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:45
Count of miRNA genes:45
Interacting mature miRNAs:45
Transcripts:ENSMUST00000050928
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301372Sluc13_msusceptibility to lung cancer 13 (mouse)Not determined141882760452827726Mouse
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420887473121269804Mouse
1357527Epfpq1_mepididymal fat percentage QTL 1 (mouse)Not determined142106245071885801Mouse
14746973Manh76_mmandible shape 76 (mouse)142228721756287217Mouse
4142485Modor2_mmodifier of ocular retardation 2 (mouse)Not determined142492624858179769Mouse
13506929Recrq10_mrecombination rate in male meiosis QTL 10 (mouse)142792195761137449Mouse
10043886Cia49_mcollagen induced arthritis QTL 49 (mouse)Not determined142999699463997133Mouse
27226744Metcl6_mmetatarsal-calcaneal length 6, 5 week (mouse)143032195752937457Mouse
27226774Tibl15_mtibia length 15, 10 week (mouse)143032195787937436Mouse
1300909Ath13_matherosclerosis 13 (mouse)Not determined143033525064335381Mouse
1300998Cia17_mcollagen induced arthritis 17 (mouse)Not determined143033525064335381Mouse
27226737Metcl12_mmetatarsal-calcaneal length 12, 10 week (mouse)143322195759437449Mouse
27226727Tibl21_mtibia length 21, 16 week (mouse)143412195752937457Mouse
1300625Cosz2_mcocaine seizure 2 (mouse)Not determined143504579768785736Mouse
10043887Cia50_mcollagen induced arthritis QTL 50 (mouse)Not determined143743018571430320Mouse
4142419Tgq26_mtriglyceride QTL 26 (mouse)Not determined4033731974337319Mouse
1301777Bglq15_mbody growth late QTL 15 (mouse)Not determined144296241676962593Mouse
1301424Skull21_mskull morphology 21 (mouse)Not determined144296241676962593Mouse
1300805Mors3_mmodifier of obesity related sterility 3 (mouse)Not determined144303727077037418Mouse
1301091Bbaa21_mB.burgdorferi-associated arthritis 21 (mouse)Not determined144306584777066045Mouse
4141400Nilac8_mnicotine induced locomotor activity 8 (mouse)Not determined144306584777066045Mouse
4141484Hcbip1_mhexachlorobenzene induced porphyria 1 (mouse)Not determined4733525059962593Mouse
1300605El5_mepilepsy 5 (mouse)Not determined144945542583455556Mouse

Markers in Region
UniSTS:485138  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381450,319,892 - 50,320,833UniSTSGRCm38
MGSCv371450,939,567 - 50,940,508UniSTSGRCm37
Celera1446,553,556 - 46,554,497UniSTS
Cytogenetic Map14C3-D1UniSTS
UniSTS:494334  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381450,319,836 - 50,320,868UniSTSGRCm38
MGSCv371450,939,511 - 50,940,543UniSTSGRCm37
Celera1446,553,500 - 46,554,532UniSTS
Cytogenetic Map14C3-D1UniSTS


Expression


Sequence


RefSeq Acc Id: ENSMUST00000050928   ⟹   ENSMUSP00000057376
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1450,557,293 - 50,558,325 (-)Ensembl
GRCm38.p6 Ensembl1450,319,836 - 50,320,868 (-)Ensembl
RefSeq Acc Id: ENSMUST00000216732
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1450,554,153 - 50,564,218 (-)Ensembl
GRCm38.p6 Ensembl1450,316,696 - 50,326,761 (-)Ensembl
RefSeq Acc Id: ENSMUST00000217152   ⟹   ENSMUSP00000150732
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1450,553,963 - 50,564,218 (-)Ensembl
GRCm38.p6 Ensembl1450,316,506 - 50,326,761 (-)Ensembl
RefSeq Acc Id: NM_146664   ⟹   NP_666875
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391450,557,293 - 50,558,325 (-)NCBI
GRCm381450,319,836 - 50,320,868 (-)NCBI
MGSCv371450,939,567 - 50,940,508 (-)RGD
Celera1446,553,556 - 46,554,497 (-)RGD
cM Map14 ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_666875 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAI41030 (Get FASTA)   NCBI Sequence Viewer  
  AAL61095 (Get FASTA)   NCBI Sequence Viewer  
  AAP71197 (Get FASTA)   NCBI Sequence Viewer  
  EDL20804 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000057376
  ENSMUSP00000057376.3
  ENSMUSP00000150732.2
GenBank Protein Q8VFT4 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_666875   ⟸   NM_146664
- UniProtKB: Q8VFT4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000150732   ⟸   ENSMUST00000217152
RefSeq Acc Id: ENSMUSP00000057376   ⟸   ENSMUST00000050928

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8VFT4-F1-model_v2 AlphaFold Q8VFT4 1-313 view protein structure


Additional Information

Database Acc Id Source(s)
AGR Gene MGI:3030568 AgrOrtholog
Ensembl Genes ENSMUSG00000045306 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000050928 ENTREZGENE
  ENSMUST00000050928.3 UniProtKB/Swiss-Prot
  ENSMUST00000217152.2 UniProtKB/Swiss-Prot
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/Swiss-Prot
InterPro GPCR_Rhodpsn UniProtKB/Swiss-Prot
  GPCR_Rhodpsn_7TM UniProtKB/Swiss-Prot
  Olfact_rcpt UniProtKB/Swiss-Prot
KEGG Report mmu:258658 UniProtKB/Swiss-Prot
MGD MGI:3030568 ENTREZGENE
NCBI Gene 258658 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/Swiss-Prot
  OLFACTORY RECEPTOR 4M1-RELATED UniProtKB/Swiss-Prot
Pfam 7tm_4 UniProtKB/Swiss-Prot
PhenoGen Or4m1 PhenoGen
PRINTS GPCRRHODOPSN UniProtKB/Swiss-Prot
  OLFACTORYR UniProtKB/Swiss-Prot
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/Swiss-Prot
  G_PROTEIN_RECEP_F1_2 UniProtKB/Swiss-Prot
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/Swiss-Prot
UniProt OL734_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-05-24 Or4m1  olfactory receptor family 4 subfamily M member 1  Olfr734  olfactory receptor 734  Symbol and/or name change 5135510 APPROVED