Eif3d (eukaryotic translation initiation factor 3, subunit D) - Rat Genome Database

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Gene: Eif3d (eukaryotic translation initiation factor 3, subunit D) Mus musculus
Analyze
Symbol: Eif3d
Name: eukaryotic translation initiation factor 3, subunit D
RGD ID: 1551512
MGI Page MGI
Description: Contributes to translation initiation factor activity. Involved in formation of cytoplasmic translation initiation complex. Part of eukaryotic translation initiation factor 3 complex, eIF3m. Is active in synapse. Is expressed in embryo. Orthologous to human EIF3D (eukaryotic translation initiation factor 3 subunit D).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 66/67kD; 66/67kDa; AA407891; eIF-3-zeta; Eif3; eIF3 p66; eIF3p; eIF3p66; Eif3s7; eukaryotic translation initiation factor 3 subunit 7; eukaryotic translation initiation factor 3 subunit D; eukaryotic translation initiation factor 3, subunit 7 (zeta); MGC115774; translation initiation factor eIF3 p66
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Gm17031  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391577,843,201 - 77,855,006 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1577,843,198 - 77,855,013 (-)EnsemblGRCm39 Ensembl
GRCm381577,958,998 - 77,970,824 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1577,958,998 - 77,970,813 (-)EnsemblGRCm38mm10GRCm38
MGSCv371577,789,428 - 77,801,254 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361577,786,256 - 77,798,015 (-)NCBIMGSCv36mm8
Celera1579,418,242 - 79,430,068 (-)NCBICelera
Cytogenetic Map15E1NCBI
cM Map1536.92NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. The scanning mechanism of eukaryotic translation initiation. Hinnebusch AG Annu Rev Biochem. 2014;83:779-812. doi: 10.1146/annurev-biochem-060713-035802. Epub 2014 Jan 29.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12477932   PMID:12520002   PMID:12904583   PMID:14610273   PMID:15782199   PMID:16141072  
PMID:16141073   PMID:17581632   PMID:18799693   PMID:21267068   PMID:21873635   PMID:24003236   PMID:24457600   PMID:25211037   PMID:26365490   PMID:30196744   PMID:30457570   PMID:31162944  
PMID:32325033   PMID:32434143   PMID:32554809   PMID:34133714   PMID:34752747  


Genomics

Comparative Map Data
Eif3d
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391577,843,201 - 77,855,006 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1577,843,198 - 77,855,013 (-)EnsemblGRCm39 Ensembl
GRCm381577,958,998 - 77,970,824 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1577,958,998 - 77,970,813 (-)EnsemblGRCm38mm10GRCm38
MGSCv371577,789,428 - 77,801,254 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361577,786,256 - 77,798,015 (-)NCBIMGSCv36mm8
Celera1579,418,242 - 79,430,068 (-)NCBICelera
Cytogenetic Map15E1NCBI
cM Map1536.92NCBI
EIF3D
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382236,510,855 - 36,529,166 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2236,510,855 - 36,529,184 (-)EnsemblGRCh38hg38GRCh38
GRCh372236,906,902 - 36,925,213 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362235,236,843 - 35,255,223 (-)NCBINCBI36Build 36hg18NCBI36
Build 342235,231,397 - 35,249,983NCBI
Celera2220,709,038 - 20,727,412 (-)NCBICelera
Cytogenetic Map22q12.3NCBI
HuRef2219,874,728 - 19,893,087 (-)NCBIHuRef
CHM1_12236,865,836 - 36,884,218 (-)NCBICHM1_1
T2T-CHM13v2.02236,971,029 - 36,989,335 (-)NCBIT2T-CHM13v2.0
Eif3d
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87111,420,351 - 111,432,761 (-)NCBIGRCr8
mRatBN7.27109,539,795 - 109,552,184 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7109,539,356 - 109,552,206 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx7111,289,645 - 111,302,037 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07113,513,203 - 113,525,595 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07113,481,200 - 113,493,575 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.07119,188,189 - 119,200,578 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7119,188,185 - 119,200,623 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07119,182,951 - 119,195,340 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47115,877,161 - 115,889,550 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.17115,911,390 - 115,923,780 (-)NCBI
Celera7105,880,627 - 105,893,016 (-)NCBICelera
Cytogenetic Map7q34NCBI
Eif3d
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541323,092,749 - 23,110,312 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541323,096,440 - 23,110,312 (-)NCBIChiLan1.0ChiLan1.0
EIF3D
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22346,365,301 - 46,383,977 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12249,056,546 - 49,075,197 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02217,425,745 - 17,444,130 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12235,262,541 - 35,282,360 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2235,262,541 - 35,282,360 (-)Ensemblpanpan1.1panPan2
EIF3D
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11027,890,913 - 27,904,887 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1027,890,938 - 27,904,886 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1027,844,591 - 27,858,525 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01028,676,131 - 28,690,129 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1028,676,132 - 28,690,138 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11028,404,604 - 28,418,627 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01028,712,367 - 28,726,367 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01028,891,157 - 28,905,180 (+)NCBIUU_Cfam_GSD_1.0
Eif3d
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494511,245,864 - 11,260,055 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364924,255,977 - 4,271,081 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364924,256,210 - 4,270,469 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EIF3D
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl511,213,312 - 11,229,158 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1511,213,312 - 11,229,158 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.258,895,436 - 8,911,620 (+)NCBISscrofa10.2Sscrofa10.2susScr3
EIF3D
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11919,220,542 - 19,238,534 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1919,221,199 - 19,238,468 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666045106,632,591 - 106,651,239 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Eif3d
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462475211,197,189 - 11,212,440 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Eif3d
372 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:171
Count of miRNA genes:162
Interacting mature miRNAs:170
Transcripts:ENSMUST00000100484
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300800Ses3_msalmonella enteritidis susceptibility 3 (mouse)Not determined155711700591117153Mouse
1300851Heal4_mwound healing/regeneration 4 (mouse)Not determined1577527592104073951Mouse
1300627Sluc26_msusceptibility to lung cancer 26 (mouse)Not determined1570345653104073951Mouse
1300648Dbsty4_mdiabesity 4 (mouse)Not determined1570349271104073951Mouse
1300726Pitm4_mprion incubation time 4 (mouse)Not determined1570349271104073951Mouse
1301006Hfib1_mhepatic fibrogenesis 1 (mouse)Not determined154730633481306479Mouse
1301119Drb7_mdopamine receptor binding 7 (mouse)Not determined156533657899341028Mouse
1301171Brm2_mbrachyury modifier 2 (mouse)Not determined156552537699525499Mouse
1301708Cocrb14_mcocaine related behavior 14 (mouse)Not determined155180651585806651Mouse
1301472Pain1_mpain 1 (mouse)Not determined157532084690813185Mouse
1301860Gct3_mgranulosa cell tumorigenesis 3 (mouse)Not determined154740959681409691Mouse
1301568Tria2_mT-cell receptor induced activation 2 (mouse)Not determined154485914178859281Mouse
1301601Faq9_mfluctuating asymmetry QTL 9 (mouse)Not determined156316390397163995Mouse
1302002Cocia2_mcocaine induced activation 2 (mouse)Not determined157237245979899178Mouse
1302197Bhr2_mbronchial hyperresponsiveness 2 (mouse)Not determined1564306334103425899Mouse
1302074Bmd4_mbone mineral density 4 (mouse)Not determined1556186708103425899Mouse
1302080Szs13_mseizure susceptibility 13 (mouse)Not determined155168583285694449Mouse
1301429Pcir3_mperiosteal circumference 3 (mouse)Not determined154846536282465496Mouse
1301433Rapop5_mradiation-induced apoptosis 5 (mouse)Not determined15927302279474762Mouse
1357407Pfat4_mpredicted fat percentage 4 (mouse)8.6Body fat amountpredicted fat percentage155711700591117153Mouse
1357659Epfpq4_mepididymal fat percentage QTL 4 (mouse)Not determined15348969478601286Mouse
1357526Hyplip2_mhyperlipidemia 2 (mouse)Not determined1512402203102896555Mouse
1357559Scfq2_msubcutaneous fat pad weight QTL 2 (mouse)Not determined15348969478601286Mouse
1357756Alaa4_malopecia areata 4 (mouse)Not determined154638964680389845Mouse
1357703Vtbt17_mvertebral trabecular bone trait 17 (mouse)Not determined154455331378553437Mouse
1558786Msq1_mMAV-1 susceptibility QTL 1 (mouse)Not determined156338964681086436Mouse
1558985Eae32_mexperimental allergic encephalomyelitis susceptibility 32 (mouse)Not determined1532578416103425899Mouse
4141135Cia35_mcollagen induced arthritis 35 (mouse)Not determined156481182698811946Mouse
4142448Tailq6_mtail length QTL 6 (mouse)Not determined348969478601286Mouse
4141921Pstc3_mperiosteal circumference 3 (mouse)Not determined1567270698101270847Mouse
4141952W3q7_mweight 3 weeks QTL 7 (mouse)Not determined348969478601286Mouse
4142198Hbtq_mhabituation QTL (mouse)Not determined155116070885160833Mouse
4142252Tailaq4_mtail length adjusted QTL 4 (mouse)Not determined348969478601286Mouse
10755515Amzn3_manatomical modifier of Zfp423 3 (mouse)154638964680389845Mouse
10412067Pain2_mpain 2 (mouse)Not determined155164533985645626Mouse
10045637Heal27_mwound healing/regeneration 29 (mouse)Not determined155141836185418511Mouse
13442492Mecth2_mmechanosensation threshold 2 (mouse)157466284979387201Mouse
13504731Cath5_mcarotid atherosclerosis 5 (mouse)155478912988789129Mouse
12880420V25Dq8_mvitamin D inactive form serum level QTL 8 (mouse)156158420095584200Mouse
12791003Aath8_maortic arch atherosclerosis 8 (mouse)1573430144104073951Mouse
27226777Tibl8_mtibia length 8, 5 week (mouse)15692948184584201Mouse
15092079Igly6_mIgG glycosylation 6, GP6 (mouse)157410054082674156Mouse
15092080Igly7_mIgG glycosylation 7, GP10 (mouse)157779491982674156Mouse
27095936Ulnl4_mulna length 4, 5 week (mouse)155676339687684201Mouse
14747011Mancz13_mmandible centroid size 13 (mouse)1572382669104073951Mouse
38501067Tip3_mtuberculosis immunophenotype 3, IFN-g level (mouse)155356339689584203Mouse
26884397Humsd5_mhumerus midshaft diameter 5, 10 week (mouse)154836339698397881Mouse
26884399Humsd1_mhumerus midshaft diameter 1, 5 week (mouse)1548363396101708435Mouse
26884402Cvht9_mcranial vault height 9, 16 week (mouse)154216339695497881Mouse
26884425Cvht2_mcranial vault height 2, 5 week (mouse)1528800146102008435Mouse
26884442Sklq6_mskull length QTL 6, 5 week (mouse)156129481100797881Mouse
27226717Tibw4_mtibia width 4, proximal, 10 week (mouse)15612948178684200Mouse
27226729Tibmd2_mtibia midshaft diameter 2, 5 week (mouse)153800024486684201Mouse
27226734Tibmd5_mtibia midshaft diameter 5, 10 week (mouse)15612948186684201Mouse

Markers in Region
RH125745  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381577,959,019 - 77,959,632UniSTSGRCm38
MGSCv371577,789,449 - 77,790,062UniSTSGRCm37
Celera1579,418,263 - 79,418,876UniSTS
Cytogenetic Map15E1UniSTS
Whitehead/MRC_RH15656.93UniSTS
MARC_13472-13473:1002304233:5  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381577,959,643 - 77,960,022UniSTSGRCm38
MGSCv371577,790,073 - 77,790,452UniSTSGRCm37
Celera1579,418,887 - 79,419,266UniSTS
Cytogenetic Map15E1UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001411926 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_018749 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB012580 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK045228 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK049767 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK137428 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK145689 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK158344 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168256 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK183958 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK185859 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK191549 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK193840 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK203325 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK205598 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK216723 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL589650 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC018598 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC089020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY143197 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466545 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000100484   ⟹   ENSMUSP00000098053
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1577,843,198 - 77,855,013 (-)Ensembl
GRCm38.p6 Ensembl1577,958,998 - 77,970,813 (-)Ensembl
RefSeq Acc Id: ENSMUST00000229413
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1577,849,035 - 77,852,723 (-)Ensembl
GRCm38.p6 Ensembl1577,964,835 - 77,968,523 (-)Ensembl
RefSeq Acc Id: ENSMUST00000229713
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1577,852,414 - 77,854,997 (-)Ensembl
GRCm38.p6 Ensembl1577,968,214 - 77,970,797 (-)Ensembl
RefSeq Acc Id: ENSMUST00000229737
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1577,847,437 - 77,848,378 (-)Ensembl
GRCm38.p6 Ensembl1577,963,237 - 77,964,178 (-)Ensembl
RefSeq Acc Id: ENSMUST00000229784
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1577,849,353 - 77,854,997 (-)Ensembl
GRCm38.p6 Ensembl1577,965,153 - 77,970,797 (-)Ensembl
RefSeq Acc Id: ENSMUST00000229824
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1577,843,782 - 77,844,681 (-)Ensembl
GRCm38.p6 Ensembl1577,959,582 - 77,960,481 (-)Ensembl
RefSeq Acc Id: ENSMUST00000230419   ⟹   ENSMUSP00000155152
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1577,849,172 - 77,854,845 (-)Ensembl
GRCm38.p6 Ensembl1577,964,972 - 77,970,645 (-)Ensembl
RefSeq Acc Id: ENSMUST00000230711
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1577,846,693 - 77,847,972 (-)Ensembl
GRCm38.p6 Ensembl1577,962,493 - 77,963,772 (-)Ensembl
RefSeq Acc Id: NM_001411926   ⟹   NP_001398855
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391577,843,201 - 77,855,006 (-)NCBI
RefSeq Acc Id: NM_018749   ⟹   NP_061219
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391577,843,201 - 77,855,006 (-)NCBI
GRCm381577,958,998 - 77,970,824 (-)NCBI
MGSCv371577,789,428 - 77,801,254 (-)RGD
Celera1579,418,242 - 79,430,068 (-)RGD
cM Map15 ENTREZGENE
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_061219   ⟸   NM_018749
- UniProtKB: Q8BLH0 (UniProtKB/Swiss-Prot),   Q8BWW1 (UniProtKB/Swiss-Prot),   O70194 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000155152   ⟸   ENSMUST00000230419
RefSeq Acc Id: ENSMUSP00000098053   ⟸   ENSMUST00000100484
RefSeq Acc Id: NP_001398855   ⟸   NM_001411926
- UniProtKB: Q8BLH0 (UniProtKB/Swiss-Prot),   O70194 (UniProtKB/Swiss-Prot),   Q8BWW1 (UniProtKB/Swiss-Prot)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-O70194-F1-model_v2 AlphaFold O70194 1-548 view protein structure

Promoters
RGD ID:6825738
Promoter ID:MM_KWN:18961
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6
Transcripts:UC007WON.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361577,791,256 - 77,792,472 (+)MPROMDB
RGD ID:6825952
Promoter ID:MM_KWN:18962
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000016698,   NM_018749
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361577,801,056 - 77,801,672 (-)MPROMDB
RGD ID:8684230
Promoter ID:EPDNEW_M20145
Type:multiple initiation site
Name:AK137428_1
Description:n/a
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381577,961,589 - 77,961,649EPDNEW
RGD ID:8684232
Promoter ID:EPDNEW_M20146
Type:initiation region
Name:Eif3d_1
Description:Mus musculus eukaryotic translation initiation factor 3, subunitD , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381577,970,774 - 77,970,834EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1933181 AgrOrtholog
Ensembl Genes ENSMUSG00000016554 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000100484 ENTREZGENE
  ENSMUST00000100484.6 UniProtKB/Swiss-Prot
  ENSMUST00000230419.2 UniProtKB/TrEMBL
InterPro eIF3d UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:55944 UniProtKB/Swiss-Prot
MGD MGI:1933181 ENTREZGENE
NCBI Gene 55944 ENTREZGENE
PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT D UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR12399 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam eIF-3_zeta UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Eif3d PhenoGen
PIRSF EIF-3_zeta UniProtKB/Swiss-Prot
UniProt A0A2R8VK20_MOUSE UniProtKB/TrEMBL
  EIF3D_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q8BLH0 ENTREZGENE
  Q8BWW1 ENTREZGENE
UniProt Secondary Q8BLH0 UniProtKB/Swiss-Prot
  Q8BWW1 UniProtKB/Swiss-Prot