Annotation (Toggle Detail/Summary View) | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Gene-Chemical Interaction AnnotationsGene-Chemical Interaction Annotations
Gene-Chemical Interaction AnnotationsTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | 1,3-dinitrobenzene | increases expression | ISO | RGD:1359485 | 6480464 | 3-dinitrobenzene results in increased expression of CTNNA1 mRNA | CTD | PMID:21983209 | 17beta-hydroxy-5alpha-androstan-3-one | decreases expression | ISO | | 6480464 | Dihydrotestosterone results in decreased expression of CTNNA1 mRNA | CTD | PMID:17023530 | 2,3,7,8-tetrachlorodibenzodioxine | increases expression | EXP | | 6480464 | Tetrachlorodibenzodioxin results in increased expression of CTNNA1 mRNA | CTD | PMID:20106945 | 2,3,7,8-tetrachlorodibenzodioxine | increases expression | EXP | | 6480464 | Tetrachlorodibenzodioxin results in increased expression of CTNNA1 mRNA | CTD | PMID:20106945 PMID:21632981 | 2,3,7,8-tetrachlorodibenzodioxine | affects expression | ISO | | 6480464 | Tetrachlorodibenzodioxin affects the expression of CTNNA1 mRNA | CTD | PMID:21570461 | 3,4-methylenedioxymethamphetamine | increases expression | ISO | | 6480464 | N-Methyl-3,4-methylenedioxyamphetamine results in increased expression of CTNNA1 mRNA | CTD | PMID:20188158 | 3-methylcholanthrene | multiple interactions | EXP | | 6480464 | Methylcholanthrene promotes the reaction [AHR protein binds to CTNNA1 promoter] | CTD | PMID:20348232 | 5-aza-2'-deoxycytidine | multiple interactions | EXP | | 6480464 | [decitabine co-treated with vorinostat] affects the expression of CTNNA1 mRNA | CTD | PMID:17330099 | 6-propyl-2-thiouracil | affects expression | ISO | RGD:1359485 | 6480464 | Propylthiouracil affects the expression of CTNNA1 mRNA | CTD | PMID:19483382 | all-trans-retinoic acid | decreases expression | EXP | | 6480464 | Tretinoin results in decreased expression of CTNNA1 mRNA | CTD | PMID:12875902 | all-trans-retinoic acid | increases expression | ISO | | 6480464 | Tretinoin results in increased expression of CTNNA1 mRNA | CTD | PMID:16236135 | amiodarone | affects expression | ISO | RGD:1359485 | 6480464 | Amiodarone affects the expression of CTNNA1 mRNA | CTD | PMID:19483382 | ammonium chloride | increases expression | ISO | RGD:1359485 | 6480464 | Ammonium Chloride results in increased expression of CTNNA1 protein | CTD | PMID:16483693 | atrazine | multiple interactions | EXP | | 6480464 | [Atrazine co-treated with Arsenates] results in increased expression of CTNNA1 mRNA | CTD | PMID:18585445 | benzbromarone | affects expression | ISO | RGD:1359485 | 6480464 | Benzbromarone affects the expression of CTNNA1 mRNA | CTD | PMID:19483382 | benzo[a]pyrene | multiple interactions | ISO | | 6480464 | [Benzo(a)pyrene co-treated with XPA gene mutant form co-treated with TRP53 gene mutant form] results in decreased expression of CTNNA1 mRNA | CTD | PMID:21715664 | bis(2-chloroethyl) sulfide | increases phosphorylation | EXP | | 6480464 | Mustard Gas results in increased phosphorylation of CTNNA1 protein | CTD | PMID:19845377 | bis(2-ethylhexyl) phthalate | increases expression | ISO | RGD:1359485 | 6480464 | Diethylhexyl Phthalate results in increased expression of CTNNA1 protein | CTD | PMID:16678996 | bis(2-ethylhexyl) phthalate | increases expression | ISO | RGD:1359485 | 6480464 | Diethylhexyl Phthalate results in increased expression of CTNNA1 mRNA | CTD | PMID:20920545 | cadmium dichloride | multiple interactions | ISO | RGD:1359485 | 6480464 | Cadmium Chloride inhibits the reaction [CTNNB1 protein binds to CDH1 protein binds to CTNNA1 protein] | CTD | PMID:20459685 | cadmium dichloride | affects localization | ISO | RGD:1359485 | 6480464 | Cadmium Chloride affects the localization of CTNNA1 protein | CTD | PMID:20459685 | calcitriol | decreases expression | EXP | | 6480464 | Calcitriol results in decreased expression of CTNNA1 mRNA | CTD | PMID:12875902 | cisplatin | decreases expression | ISO | RGD:1359485 | 6480464 | Cisplatin results in decreased expression of CTNNA1 protein | CTD | PMID:22023808 | clofibrate | affects expression | ISO | RGD:1359485 | 6480464 | Clofibrate affects the expression of CTNNA1 mRNA | CTD | PMID:19483382 | copper(2+) sulfate | increases expression | EXP | | 6480464 | Copper Sulfate results in increased expression of CTNNA1 mRNA | CTD | PMID:19549813 | corticosterone | multiple interactions | ISO | | 6480464 | [Corticosterone results in increased phosphorylation of NDRG1 protein] which results in increased expression of and results in increased localization of CTNNA1 protein | CTD | PMID:21655274 | diarsenic trioxide | decreases expression | EXP | | 6480464 | arsenic trioxide results in decreased expression of CTNNA1 mRNA | CTD | PMID:15761015 | dibutyl phthalate | increases expression | ISO | | 6480464 | Dibutyl Phthalate results in increased expression of CTNNA1 mRNA | CTD | PMID:21266533 | elemental selenium | increases expression | EXP | | 6480464 | Selenium results in increased expression of CTNNA1 mRNA | CTD | PMID:19244175 | fumonisin B1 | increases expression | ISO | | 6480464 | fumonisin B1 results in increased expression of CTNNA1 mRNA | CTD | PMID:16221962 | hydrogen peroxide | decreases expression | EXP | | 6480464 | Hydrogen Peroxide results in decreased expression of CTNNA1 mRNA | CTD | PMID:12419474 | hydrogen peroxide | decreases secretion | ISO | | 6480464 | Hydrogen Peroxide results in decreased secretion of CTNNA1 mRNA | CTD | PMID:21179422 | L-ethionine | affects expression | ISO | RGD:1359485 | 6480464 | Ethionine affects the expression of CTNNA1 mRNA | CTD | PMID:19483382 | manganese atom | decreases expression | EXP | | 6480464 | Manganese results in decreased expression of CTNNA1 mRNA | CTD | PMID:17175027 | manganese(0) | decreases expression | EXP | | 6480464 | Manganese results in decreased expression of CTNNA1 mRNA | CTD | PMID:17175027 | manganese(II) chloride | decreases expression | EXP | | 6480464 | manganese chloride results in decreased expression of CTNNA1 mRNA | CTD | PMID:17175027 | methylazoxymethanol | increases expression | ISO | | 6480464 | methylazoxymethanol results in increased expression of CTNNA1 mRNA | CTD | PMID:17107856 | mitomycin C | affects response to substance | EXP | | 6480464 | CTNNA1 protein affects the susceptibility to Mitomycin | CTD | PMID:16217747 | ochratoxin A | increases expression | ISO | RGD:1359485 | 6480464 | ochratoxin A results in increased expression of CTNNA1 mRNA | CTD | PMID:22124623 | ochratoxin A | increases expression | EXP | | 6480464 | ochratoxin A results in increased expression of CTNNA1 mRNA | CTD | PMID:22124623 | omeprazole | affects expression | ISO | RGD:1359485 | 6480464 | Omeprazole affects the expression of CTNNA1 mRNA | CTD | PMID:19483382 | paracetamol | affects expression | ISO | | 6480464 | Acetaminophen affects the expression of CTNNA1 mRNA | CTD | PMID:17562736 | phenobarbital | increases expression | ISO | RGD:1359485 | 6480464 | Phenobarbital results in increased expression of CTNNA1 mRNA | CTD | PMID:12082028 | phenobarbital | affects expression | ISO | | 6480464 | Phenobarbital affects the expression of CTNNA1 mRNA | CTD | PMID:23091169 | pirinixic acid | increases expression | ISO | | 6480464 | pirinixic acid results in increased expression of CTNNA1 mRNA | CTD | PMID:16221962 | pirinixic acid | affects expression | ISO | RGD:1359485 | 6480464 | pirinixic acid affects the expression of CTNNA1 mRNA | CTD | PMID:19483382 | quercetin | increases expression | EXP | | 6480464 | Quercetin results in increased expression of CTNNA1 mRNA | CTD | PMID:15309432 | selenium atom | increases expression | EXP | | 6480464 | Selenium results in increased expression of CTNNA1 mRNA | CTD | PMID:19244175 | sodium dichromate | decreases expression | EXP | | 6480464 | sodium bichromate results in decreased expression of CTNNA1 mRNA | CTD | PMID:12760830 | tert-butyl hydroperoxide | decreases expression | EXP | | 6480464 | tert-Butylhydroperoxide results in decreased expression of CTNNA1 mRNA | CTD | PMID:12419474 | thioacetamide | affects expression | ISO | RGD:1359485 | 6480464 | Thioacetamide affects the expression of CTNNA1 mRNA | CTD | PMID:19483382 | trimellitic anhydride | decreases expression | ISO | | 6480464 | trimellitic anhydride results in decreased expression of CTNNA1 mRNA | CTD | PMID:19042947 | tunicamycin | decreases expression | ISO | | 6480464 | Tunicamycin results in decreased expression of CTNNA1 mRNA | CTD | PMID:17127020 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Gene Ontology AnnotationsMolecular Pathway AnnotationsDisease Annotations
|
|
|
Gene-Chemical Interaction AnnotationsGene Ontology Annotations
|
|
|
|
|
|
|
|
Molecular Pathway Annotations
|
|
| External Database Links | |
| KEGG Pathway | Adherens junction |
| Arrhythmogenic right ventricular cardiomyopathy (ARVC) | |
| Bacterial invasion of epithelial cells | |
| Endometrial cancer | |
| Hippo signaling pathway | |
| Leukocyte transendothelial migration | |
| Pathways in cancer | |
| Tight junction | |
| Pathway Interaction Database | Arf6 trafficking events (PID:200057) |
| CDC42 signaling events (PID:200069) | |
| E-cadherin signaling in keratinocytes (PID:200147) | |
| E-cadherin signaling in the nascent adherens junction (PID:200124) | |
| N-cadherin signaling events (PID:200209) | |
| Nectin adhesion pathway (PID:200065) | |
| Posttranslational regulation of adherens junction stability and dissassembly (PID:200117) | |
| RAC1 signaling pathway (PID:200222) | |
| Signaling events mediated by Hepatocyte Growth Factor Receptor (c-Met) (PID:200041) | |
| Signaling events mediated by VEGFR1 and VEGFR2 (PID:200188) | |
| Stabilization and expansion of the E-cadherin adherens junction (PID:200182) | |
References - curated| 1. |
Aaltomaa S, etal., Anticancer Res. 2005 Nov-Dec;25(6C):4707-12. |
| 2. |
Blanco D, etal., Lab Invest. 2004 Aug;84(8):999-1012. |
| 3. |
Carico E, etal., Gynecol Oncol. 2001 Feb;80(2):156-61. |
| 4. |
Davies BR, etal., Histopathology. 1998 Jan;32(1):69-80. |
| 5. |
GOA_HUMAN data from the GO Consortium |
| 6. |
Kashibuchi K, etal., Eur Urol. 2006 May;49(5):839-45; discussion 845. Epub 2006 Jan 6. |
| 7. |
Kashibuchi K, etal., Int J Urol. 2007 Sep;14(9):789-94. |
| 8. |
Khare L, etal., Int J Oncol. 1999 Jan;14(1):33-40. |
| 9. |
Nakopoulou L, etal., Histopathology. 2002 Jun;40(6):536-46. |
| 10. |
Park D, etal., APMIS. 2007 Jan;115(1):52-65. |
| 11. |
Pipeline to import KEGG annotations from KEGG into RGD Pathway Ontology |
| 12. |
Pipeline to import Pathway Interaction Database annotations from NCI into RGD |
| 13. |
RGD automated import pipeline for gene-chemical interactions |
| 14. |
Scholten AN, etal., Int J Gynecol Cancer. 2006 May-Jun;16(3):1379-85. |
| 15. |
Shimazui T, etal., Int J Cancer. 1997 Oct 21;74(5):523-8. |
| 16. |
Tomlinson JS, etal., Cancer Res. 2001 Jul 1;61(13):5231-41. |
| 17. |
van Oort IM, etal., Prostate. 2007 Sep 15;67(13):1432-8. |
References - uncurated| PubMed | 10026224 |
| 10381631 | |
| 10420987 | |
| 10460003 | |
| 10508479 | |
| 10635315 | |
| 10868478 | |
| 10910767 | |
| 11069925 | |
| 11080149 | |
| 11179419 | |
| 11226248 | |
| 11274246 | |
| 11883950 | |
| 11907041 | |
| 11960376 | |
| 12003790 | |
| 12417594 | |
| 12477722 | |
| 12477932 | |
| 12532469 | |
| 12604612 | |
| 12640114 | |
| 12734196 | |
| 12808048 | |
| 14567991 | |
| 14599963 | |
| 14625392 | |
| 14702039 | |
| 14755240 | |
| 15294866 | |
| 15297182 | |
| 15302935 | |
| 15489334 | |
| 15492215 | |
| 15541354 | |
| 15561718 | |
| 15695815 | |
| 15916880 | |
| 15923648 | |
| 15948257 | |
| 16212417 | |
| 16273278 | |
| 16322481 | |
| 16344560 | |
| 16798615 | |
| 16807684 | |
| 16927799 | |
| 17072306 | |
| 17081983 | |
| 17576040 | |
| 17620599 | |
| 17668349 | |
| 17979184 | |
| 18078809 | |
| 18215130 | |
| 18418437 | |
| 18566211 | |
| 18781797 | |
| 1904011 | |
| 19124205 | |
| 1924379 | |
| 19458087 | |
| 19656157 | |
| 19726720 | |
| 19745064 | |
| 19763817 | |
| 19773761 | |
| 19826047 | |
| 19913121 | |
| 19918298 | |
| 19941816 | |
| 20032304 | |
| 20360068 | |
| 20371743 | |
| 20529814 | |
| 20529828 | |
| 20628086 | |
| 20933443 | |
| 20936779 | |
| 21030692 | |
| 21139048 | |
| 21145461 | |
| 21693764 | |
| 21708131 | |
| 21832049 | |
| 21875946 | |
| 21890473 | |
| 21900206 | |
| 21906983 | |
| 21937720 | |
| 21963094 | |
| 22080244 | |
| 22381337 | |
| 22469663 | |
| 22493458 | |
| 22586326 | |
| 22774602 | |
| 22797925 | |
| 22863883 | |
| 22939629 | |
| 23000965 | |
| 23208944 | |
| 23383273 | |
| 7542250 | |
| 7650039 | |
| 7651399 | |
| 7706414 | |
| 7790378 | |
| 7806582 | |
| 7890674 | |
| 7945318 | |
| 7954478 | |
| 8188230 | |
| 8227214 | |
| 8259519 | |
| 8323564 | |
| 8404069 | |
| 9110993 | |
| 9168809 | |
| 9214391 | |
| 9233779 | |
| 9266853 | |
| 9434630 | |
| 9512503 | |
| 9700171 | |
| 9762469 |
RGD Disease Portals| CTNNA1 has been annotated in the following RGD Disease Portals. |
|||||||
 |
| ||||||
 |
| ||||||
 |
| ||||||
 |
| ||||||
 |
| ||||||
 |
| ||||||
 |
| ||||||
Candidate Gene StatusComparative Map Data| CTNNA1 (Homo sapiens) |
|
|||||||||||||||||||||||||||||||||||
| Ctnna1 (Rattus norvegicus) |
|
Position Markers| WI-17966 |
|
||||||||||||||||||||||||||||||||||||||||||||||||||
| SHGC-13050 |
|
||||||||||||||||||||||||||||||||||||||||||||||||||
| RH91185 |
|
||||||||||||||||||||||||||||||||||||||||||||||||||
| SHGC-149332 |
|
||||||||||||||||||||||||||||||||||||||||||||||||||
| SHGC-36193 |
|
||||||||||||||||||||||||||||||||||||||||||||||||||
| bac5237S |
|
||||||||||||||||||||||||||||||||||||||||||||||||||
| bac5253S |
|
||||||||||||||||||||||||||||||||||||||||||||||||||
| SHGC-145669 |
|
||||||||||||||||||||||||||||||||||||||||||||||||||
| RH16367 |
|
||||||||||||||||||||||||||||||||||||||||||||||||||
| RH11437 |
|
||||||||||||||||||||||||||||||||||||||||||||||||||
| G17002 |
|
||||||||||||||||||||||||||||||||||||||||||||||||||
| SHGC-2340 |
|
||||||||||||||||||||||||||||||||||||||||||||||||||
| RH70257 |
|
||||||||||||||||||||||||||||||||||||||||||||||||||
| D5S1856 |
|
||||||||||||||||||||||||||||||||||||||||||||||||||
| G29950 |
|
||||||||||||||||||||||||||||||||||||||||||||||||||
| RH36132 |
|
||||||||||||||||||||||||||||||||||||||||||||||||||
| A002T30 |
|
||||||||||||||||||||||||||||||||||||||||||||||||||
| MARC_13807-13808:1006870442:1 |
|
||||||||||||||||||||||||||||||||||||||||||||||||||
| D5S517E |
|
||||||||||||||||||||||||||||||||||||||||||||||||||
| STS-AA026630 |
|
||||||||||||||||||||||||||||||||||||||||||||||||||
| GDB:591091 |
|
||||||||||||||||||||||||||||||||||||||||||||||||||
| D5S2430 |
|
||||||||||||||||||||||||||||||||||||||||||||||||||
| Lrrtm2 |
|
QTLs in Region (Human Genome Assembly GRCh37)| The following QTLs overlap with this region. |  | Full Report | | CSV | | TAB | | Printer | | Gviewer |
Nucleotide Sequences| Nucleotide RefSeqs | NM_001903 | (Get FASTA) | Search GEO for Microarray Profiles |
| GenBank Nucleotide | ABBA01068653 | (Get FASTA) | Search GEO for Microarray Profiles |
| ABBA01068654 | (Get FASTA) | Search GEO for Microarray Profiles | |
| ABBA01068655 | (Get FASTA) | Search GEO for Microarray Profiles | |
| ABBA01068656 | (Get FASTA) | Search GEO for Microarray Profiles | |
| ABBA01068657 | (Get FASTA) | Search GEO for Microarray Profiles | |
| ABBA01068658 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AC011405 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AC034243 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AF102803 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK055751 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK094151 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK296708 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK297332 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK300439 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK304267 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AMYH01015644 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AMYH01015645 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AMYH01015646 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AU141929 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AY884207 | (Get FASTA) | Search GEO for Microarray Profiles | |
| BC000385 | (Get FASTA) | Search GEO for Microarray Profiles | |
| BC031262 | (Get FASTA) | Search GEO for Microarray Profiles | |
| BU624488 | (Get FASTA) | Search GEO for Microarray Profiles | |
| CH471062 | (Get FASTA) | Search GEO for Microarray Profiles | |
| D13866 | (Get FASTA) | Search GEO for Microarray Profiles | |
| D14705 | (Get FASTA) | Search GEO for Microarray Profiles | |
| HQ589335 | (Get FASTA) | Search GEO for Microarray Profiles | |
| L22080 | (Get FASTA) | Search GEO for Microarray Profiles | |
| L23805 | (Get FASTA) | Search GEO for Microarray Profiles | |
| U03100 | (Get FASTA) | Search GEO for Microarray Profiles |
| RefSeq Acc Id: | NM_001903 | |||||||||||||||||||||||||
| RefSeq Status: | VALIDATED | |||||||||||||||||||||||||
| Type: | CODING | |||||||||||||||||||||||||
| Protein Acc Id: | NP_001894 | |||||||||||||||||||||||||
| Position: |
|
Protein Sequences| Protein RefSeqs | NP_001894 | (Get FASTA) |
| GenBank Protein | AAA18949 | (Get FASTA) |
| AAA35502 | (Get FASTA) | |
| AAA86430 | (Get FASTA) | |
| AAC99459 | (Get FASTA) | |
| AAH00385 | (Get FASTA) | |
| AAH31262 | (Get FASTA) | |
| AAW56940 | (Get FASTA) | |
| ABM82176 | (Get FASTA) | |
| ABM85361 | (Get FASTA) | |
| AEF32483 | (Get FASTA) | |
| BAA02979 | (Get FASTA) | |
| BAA03530 | (Get FASTA) | |
| BAG52830 | (Get FASTA) | |
| BAG59301 | (Get FASTA) | |
| BAG62162 | (Get FASTA) | |
| BAG65130 | (Get FASTA) | |
| BAH12550 | (Get FASTA) | |
| EAW62122 | (Get FASTA) | |
| EAW62123 | (Get FASTA) | |
| EAW62124 | (Get FASTA) | |
| P35221 | (Get FASTA) |
Promoters| RGD ID: | 6859440 | ||||||||||
| Promoter ID: | EPDNEW_H2885 | ||||||||||
| Type: | initiation region | ||||||||||
| Name: | PREB_1 | ||||||||||
| Description: | prolactin regulatory element binding | ||||||||||
| SO ACC ID: | SO:0000170 | ||||||||||
| Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||||
| Position: |
|
| RGD ID: | 6802983 | ||||||||||
| Promoter ID: | HG_KWN:51217 | ||||||||||
| Type: | CpG-Island | ||||||||||
| SO ACC ID: | SO:0000170 | ||||||||||
| Source: | MPROMDB | ||||||||||
| Tissues & Cell Lines: | HeLa_S3, K562, Lymphoblastoid, NB4 | ||||||||||
| Transcripts: | NM_001903, UC003LDI.1 | ||||||||||
| Position: |
|
| RGD ID: | 6851322 | ||||||||||
| Promoter ID: | EP73459 | ||||||||||
| Type: | initiation region | ||||||||||
| Name: | HS_CTNNA1 | ||||||||||
| Description: | Catenin (cadherin-associated protein), alpha 1, 102kDa. | ||||||||||
| SO ACC ID: | SO:0000170 | ||||||||||
| Source: | EPD (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||||
| Experiment Methods: | NEDO full length human cDNA sequencing project.; Oligo-capping | ||||||||||
| Position: |
|
| RGD ID: | 6869436 | ||||||||||
| Promoter ID: | EPDNEW_H7883 | ||||||||||
| Type: | initiation region | ||||||||||
| Name: | CTNNA1_5 | ||||||||||
| Description: | catenin (cadherin-associated protein), alpha 1, 102kDa | ||||||||||
| SO ACC ID: | SO:0000170 | ||||||||||
| Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||||
| Position: |
|
| RGD ID: | 6869438 | ||||||||||
| Promoter ID: | EPDNEW_H7884 | ||||||||||
| Type: | initiation region | ||||||||||
| Name: | CTNNA1_6 | ||||||||||
| Description: | catenin (cadherin-associated protein), alpha 1, 102kDa | ||||||||||
| SO ACC ID: | SO:0000170 | ||||||||||
| Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||||
| Position: |
|
| RGD ID: | 6869444 | ||||||||||
| Promoter ID: | EPDNEW_H7886 | ||||||||||
| Type: | initiation region | ||||||||||
| Name: | CTNNA1_7 | ||||||||||
| Description: | catenin (cadherin-associated protein), alpha 1, 102kDa | ||||||||||
| SO ACC ID: | SO:0000170 | ||||||||||
| Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||||
| Position: |
|
| RGD ID: | 6869446 | ||||||||||
| Promoter ID: | EPDNEW_H7887 | ||||||||||
| Type: | initiation region | ||||||||||
| Name: | CTNNA1_8 | ||||||||||
| Description: | catenin (cadherin-associated protein), alpha 1, 102kDa | ||||||||||
| SO ACC ID: | SO:0000170 | ||||||||||
| Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||||
| Position: |
|
| RGD ID: | 6803003 | ||||||||||
| Promoter ID: | HG_KWN:51219 | ||||||||||
| Type: | Non-CpG | ||||||||||
| SO ACC ID: | SO:0000170 | ||||||||||
| Source: | MPROMDB | ||||||||||
| Tissues & Cell Lines: | CD4+TCell | ||||||||||
| Transcripts: | ENST00000274711, NM_015564, UC003LDK.1, UC003LDL.1, UC010JEZ.1 | ||||||||||
| Position: |
|
| RGD ID: | 6869450 | ||||||||||
| Promoter ID: | EPDNEW_H7888 | ||||||||||
| Type: | initiation region | ||||||||||
| Name: | CTNNA1_9 | ||||||||||
| Description: | catenin (cadherin-associated protein), alpha 1, 102kDa | ||||||||||
| SO ACC ID: | SO:0000170 | ||||||||||
| Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||||
| Position: |
|
| RGD ID: | 6869448 | ||||||||||
| Promoter ID: | EPDNEW_H7889 | ||||||||||
| Type: | initiation region | ||||||||||
| Name: | CTNNA1_10 | ||||||||||
| Description: | catenin (cadherin-associated protein), alpha 1, 102kDa | ||||||||||
| SO ACC ID: | SO:0000170 | ||||||||||
| Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||||
| Position: |
|
External Database Links| Database | Acc Id | Source(s) |
| COSMIC | CTNNA1 | COSMIC |
| Ensembl Genes | ENSG00000044115 | ENTREZGENE |
| Ensembl Protein | ENSP00000304669 | ENTREZGENE |
| Ensembl Transcript | ENST00000302763 | ENTREZGENE |
| Entrez Gene | 1495 | ENTREZGENE |
| Germonline | ENSG00000044115 | |
| HGNC ID | 2509 | ENTREZGENE |
| HomoloGene Group ID | 1433 | ENTREZGENE |
| HPRD ID | 00285 | ENTREZGENE |
| InterPro | Alpha_catenin | UniProtKB/Swiss-Prot |
| Vinculin/catenin | UniProtKB/Swiss-Prot | |
| Vinculin_CS | UniProtKB/Swiss-Prot | |
| IPI | IPI00215948 | UniProtKB/Swiss-Prot |
| IPI00473136 | UniProtKB/Swiss-Prot | |
| IPI00973923 | UniProtKB/TrEMBL | |
| IPI00974270 | UniProtKB/TrEMBL | |
| IPI00974559 | UniProtKB/TrEMBL | |
| IPI00975808 | UniProtKB/TrEMBL | |
| IPI00976432 | UniProtKB/TrEMBL | |
| IPI00977020 | UniProtKB/TrEMBL | |
| IPI00977948 | UniProtKB/TrEMBL | |
| IPI00978814 | UniProtKB/TrEMBL | |
| IPI00979448 | UniProtKB/TrEMBL | |
| IPI00980391 | UniProtKB/TrEMBL | |
| IPI00980677 | UniProtKB/TrEMBL | |
| IPI00981186 | UniProtKB/TrEMBL | |
| IPI00981271 | UniProtKB/TrEMBL | |
| IPI00981825 | UniProtKB/TrEMBL | |
| IPI00982099 | UniProtKB/TrEMBL | |
| IPI00982474 | UniProtKB/TrEMBL | |
| IPI00982653 | UniProtKB/TrEMBL | |
| IPI00983612 | UniProtKB/TrEMBL | |
| IPI00983665 | UniProtKB/TrEMBL | |
| IPI00984217 | UniProtKB/TrEMBL | |
| IPI00984258 | UniProtKB/TrEMBL | |
| IPI00984801 | UniProtKB/TrEMBL | |
| IPI00984817 | UniProtKB/TrEMBL | |
| IPI00985339 | UniProtKB/TrEMBL | |
| IPI00985354 | UniProtKB/TrEMBL | |
| KEGG Report | hsa:1495 | ENTREZGENE, UniProtKB/Swiss-Prot |
| OMIM | 116805 | OMIM |
| Pfam | Vinculin | UniProtKB/Swiss-Prot |
| PharmGKB | PA27008 | PharmGKB |
| PRINTS | ALPHACATENIN | UniProtKB/Swiss-Prot |
| PROSITE | VINCULIN_1 | UniProtKB/Swiss-Prot |
| Superfamily-SCOP | Vinculin/catenin | UniProtKB/Swiss-Prot |
| UniGene | Hs.445981 | ENTREZGENE |
| Hs.656653 | ENTREZGENE | |
| UniProt | CTNA1_HUMAN | UniProtKB/Swiss-Prot |
| E5RFG3_HUMAN | UniProtKB/TrEMBL | |
| E5RFK9_HUMAN | UniProtKB/TrEMBL | |
| E5RFM3_HUMAN | UniProtKB/TrEMBL | |
| E5RFM5_HUMAN | UniProtKB/TrEMBL | |
| E5RG03_HUMAN | UniProtKB/TrEMBL | |
| E5RGD2_HUMAN | UniProtKB/TrEMBL | |
| E5RGG4_HUMAN | UniProtKB/TrEMBL | |
| E5RGS1_HUMAN | UniProtKB/TrEMBL | |
| E5RGU3_HUMAN | UniProtKB/TrEMBL | |
| E5RGY6_HUMAN | UniProtKB/TrEMBL | |
| E5RGY7_HUMAN | UniProtKB/TrEMBL | |
| E5RHJ5_HUMAN | UniProtKB/TrEMBL | |
| E5RHR7_HUMAN | UniProtKB/TrEMBL | |
| E5RHV7_HUMAN | UniProtKB/TrEMBL | |
| E5RHY5_HUMAN | UniProtKB/TrEMBL | |
| E5RIB1_HUMAN | UniProtKB/TrEMBL | |
| E5RIC3_HUMAN | UniProtKB/TrEMBL | |
| E5RIE0_HUMAN | UniProtKB/TrEMBL | |
| E5RIT8_HUMAN | UniProtKB/TrEMBL | |
| E5RJ41_HUMAN | UniProtKB/TrEMBL | |
| E5RJ43_HUMAN | UniProtKB/TrEMBL | |
| E5RJC9_HUMAN | UniProtKB/TrEMBL | |
| E5RJL0_HUMAN | UniProtKB/TrEMBL | |
| E5RJP7_HUMAN | UniProtKB/TrEMBL | |
| E5RJZ2_HUMAN | UniProtKB/TrEMBL | |
| F8W845_HUMAN | UniProtKB/TrEMBL | |
| G3XAM7_HUMAN | UniProtKB/TrEMBL | |
| H0YB54_HUMAN | UniProtKB/TrEMBL | |
| H0YBB8_HUMAN | UniProtKB/TrEMBL | |
| Q8N1C0_HUMAN | UniProtKB/TrEMBL |
| More on CTNNA1 | |||
|
Entrez Gene | ||
|
Ensembl Gene | ||
|
|
|
||
|
HGNC Report | ||
|
NCBI Map Viewer | ||
|
Vista | ||
|
Vista + UCSC | ||
| RGD Object Information | |
| RGD ID: | 1348842 |
| Created: | 2005-03-08 |
| Species: | Homo sapiens |
| Last Modified: | 2013-04-30 |
| Status: | ACTIVE |
© Bioinformatics Program, HMGC at the Medical College of Wisconsin
RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.