Cnot2 (CCR4-NOT transcription complex, subunit 2) - Rat Genome Database

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Gene: Cnot2 (CCR4-NOT transcription complex, subunit 2) Mus musculus
Analyze
Symbol: Cnot2
Name: CCR4-NOT transcription complex, subunit 2
RGD ID: 1323254
MGI Page MGI
Description: Predicted to enable transcription corepressor binding activity. Predicted to contribute to poly(A)-specific ribonuclease activity. Involved in regulation of stem cell population maintenance and trophectodermal cell differentiation. Predicted to be located in cytosol; nucleoplasm; and plasma membrane. Predicted to be part of CCR4-NOT core complex. Predicted to be active in P-body. Is expressed in several structures, including 1st branchial arch; brain; genitourinary system; gut; and hemolymphoid system gland. Orthologous to human CNOT2 (CCR4-NOT transcription complex subunit 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2600016M12Rik; 2810470K03Rik; AA537049; AA959607; AW557563; C79650; CCR4-associated factor 2; CCR4-NOT transcription complex subunit 2; MGC115808
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3910116,321,065 - 116,418,891 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl10116,321,066 - 116,417,416 (-)EnsemblGRCm39 Ensembl
GRCm3810116,485,160 - 116,581,900 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl10116,485,161 - 116,581,511 (-)EnsemblGRCm38mm10GRCm38
MGSCv3710115,922,217 - 116,018,567 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3610115,889,276 - 115,985,621 (-)NCBIMGSCv36mm8
Celera10118,426,741 - 118,523,052 (-)NCBICelera
Cytogenetic Map10D2NCBI
cM Map1064.76NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Mouse brain organization revealed through direct genome-scale TF expression analysis. Gray PA, etal., Science 2004 Dec 24;306(5705):2255-7.
2. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3. Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Ko MS, etal., Development 2000 Apr;127(8):1737-49.
4. MGDs mouse GO annotations MGD data from the GO Consortium
5. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. RNA decay machines: deadenylation by the Ccr4-not and Pan2-Pan3 complexes. Wahle E and Winkler GS, Biochim Biophys Acta. 2013 Jun-Jul;1829(6-7):561-70. doi: 10.1016/j.bbagrm.2013.01.003. Epub 2013 Jan 19.
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10512203   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11544199   PMID:12477932   PMID:12520002   PMID:12904583   PMID:14610273   PMID:15489334  
PMID:15782199   PMID:15840001   PMID:16141072   PMID:16141073   PMID:17967808   PMID:18287559   PMID:18799693   PMID:20059953   PMID:20412781   PMID:21267068   PMID:21677750   PMID:21741365  
PMID:21873635   PMID:22367759   PMID:22988430   PMID:24200330   PMID:26496610   PMID:27899360   PMID:30457570   PMID:30733279   PMID:34622152   PMID:36417873  


Genomics

Comparative Map Data
Cnot2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3910116,321,065 - 116,418,891 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl10116,321,066 - 116,417,416 (-)EnsemblGRCm39 Ensembl
GRCm3810116,485,160 - 116,581,900 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl10116,485,161 - 116,581,511 (-)EnsemblGRCm38mm10GRCm38
MGSCv3710115,922,217 - 116,018,567 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3610115,889,276 - 115,985,621 (-)NCBIMGSCv36mm8
Celera10118,426,741 - 118,523,052 (-)NCBICelera
Cytogenetic Map10D2NCBI
cM Map1064.76NCBI
CNOT2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381270,243,018 - 70,354,993 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1270,243,002 - 70,354,993 (+)EnsemblGRCh38hg38GRCh38
GRCh371270,636,798 - 70,748,773 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361268,923,044 - 69,035,040 (+)NCBINCBI36Build 36hg18NCBI36
Build 341268,923,488 - 69,033,960NCBI
Celera1270,300,448 - 70,412,447 (+)NCBICelera
Cytogenetic Map12q15NCBI
HuRef1267,686,934 - 67,798,932 (+)NCBIHuRef
CHM1_11270,606,077 - 70,718,081 (+)NCBICHM1_1
T2T-CHM13v2.01270,222,411 - 70,334,463 (+)NCBIT2T-CHM13v2.0
Cnot2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8754,016,447 - 54,117,511 (-)NCBIGRCr8
mRatBN7.2752,130,445 - 52,222,338 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl752,130,441 - 52,223,575 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx754,037,151 - 54,128,665 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0756,240,245 - 56,331,759 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0756,018,227 - 56,109,741 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0759,526,105 - 59,617,307 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl759,527,124 - 59,587,385 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0759,537,579 - 59,628,786 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4755,823,982 - 55,880,812 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1755,844,724 - 55,901,542 (-)NCBI
Celera748,914,667 - 48,971,519 (-)NCBICelera
Cytogenetic Map7q22NCBI
Cnot2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540510,451,414 - 10,547,229 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540510,451,414 - 10,547,229 (+)NCBIChiLan1.0ChiLan1.0
CNOT2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21078,258,520 - 78,370,806 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11278,255,483 - 78,367,205 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01267,753,703 - 67,865,375 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11270,520,722 - 70,633,149 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1270,520,722 - 70,633,149 (+)Ensemblpanpan1.1panPan2
CNOT2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11012,057,269 - 12,174,405 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1012,009,762 - 12,172,427 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1011,995,863 - 12,112,451 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01012,188,879 - 12,305,324 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1012,141,268 - 12,305,312 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11012,055,404 - 12,171,985 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01012,302,721 - 12,419,265 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01012,426,002 - 12,542,252 (+)NCBIUU_Cfam_GSD_1.0
Cnot2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494546,069,715 - 46,170,762 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365457,938,934 - 8,042,117 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365457,938,934 - 8,040,409 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CNOT2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl534,426,394 - 34,549,310 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1534,470,911 - 34,548,968 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2537,132,108 - 37,207,783 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CNOT2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11165,823,294 - 65,932,588 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1165,861,353 - 65,934,042 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666037179,752,841 - 179,862,945 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cnot2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475027,430,575 - 27,529,081 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475027,433,671 - 27,529,545 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Cnot2
3716 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2886
Count of miRNA genes:753
Interacting mature miRNAs:932
Transcripts:ENSMUST00000020374, ENSMUST00000105265, ENSMUST00000105267, ENSMUST00000164088, ENSMUST00000164383, ENSMUST00000165527, ENSMUST00000166166, ENSMUST00000167644, ENSMUST00000167706, ENSMUST00000168036, ENSMUST00000169507, ENSMUST00000169576, ENSMUST00000169921, ENSMUST00000169937, ENSMUST00000171214, ENSMUST00000171944
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1302067Scc9_mcolon tumor susceptibility 9 (mouse)Not determined1018259333125575232Mouse
27226772Tibl13_mtibia length 13, 10 week (mouse)1018875748129635869Mouse
26884426Cvht1_mcranial vault height 1, 5 week (mouse)1024675898121035905Mouse
27095911Pglq15_mpelvic girdle length QTL 15, 16 week (mouse)1039175996129635869Mouse
27226764Tibl19_mtibia length 19, 16 week (mouse)1039175996129635869Mouse
26884407Bzwq14_mbi-zygomatic width QTL 14, 16 wee (mouse)1045476096120635905Mouse
26884450Sklq15_mskull length QTL 15, 16 week (mouse)1059335822122335905Mouse
13208560Wght9_mweight 9 (mouse)1059835822120835905Mouse
26884430Zlq5_mzygomatic length QTL 5, 10 week (mouse)1067835830124835905Mouse
26884405Huml2_mhumerus length 2, 5 week (mouse)1069735830130430862Mouse
11353832Pcholq4_mplasma cholesterol QTL 4 (mouse)1073987216125515907Mouse
11353843Gluq1_mblood glucose QTL 1 (mouse)1073987216125515907Mouse
10043881Adip24_madiposity 24 (mouse)Not determined1082392803116392952Mouse
4141054mwfh_mmodifier of white forlock hypopigmentation (mouse)Not determined83017003117017136Mouse
1357594Estoq3_membryo survival total QTL 3 (mouse)Not determined1084079650122041528Mouse
1357622Espq3_membryo survival preimplantation QTL 3 (mouse)Not determined1084079650122041528Mouse
4141479W10q8_mweight 10 weeks QTL 8 (mouse)Not determined84079650122041528Mouse
4142496W6q8_mweight 6 weeks QTL 8 (mouse)Not determined84079650122041528Mouse
4141387Lgaq5_mlate growth adjusted QTL 5 (mouse)Not determined84079650122041528Mouse
4142365Egq9_mearly growth QTL 9 (mouse)Not determined84079650122041528Mouse
1357779Tesq3_mtestis weight QTL 3 (mouse)Not determined1084079650122041528Mouse
1357638Cia29_mcollagen induced arthritis 29 (mouse)Not determined1085454982118497353Mouse
1300797Sluc22_msusceptibility to lung cancer 22 (mouse)Not determined1086713608120713756Mouse
1300908Insq4_minsulin QTL 4 (mouse)Not determined1086909085120909229Mouse
1301520Uvbi1_mUVB induced immunosuppression 1 (mouse)Not determined1086909085120909229Mouse
1300921Skl4_mskeletal size (tail length) 4 (mouse)Not determined1088088254122088391Mouse
4142386Tgq20_mtriglyceride QTL 20 (mouse)Not determined88836456122836456Mouse
1301758Fcsa3_mfemoral cross-sectional area 3 (mouse)Not determined1089927651123927754Mouse
11039516Ltpr5_mLeishmania tropica response 5 (mouse)1090506901125575232Mouse
13208554Lgth11_mbody length 11 (mouse)1090835862120835905Mouse
1357544Vtbt10_mvertebral trabecular bone trait 10 (mouse)Not determined1097217101130530862Mouse
4142461Bmd25_mbone mineral density 25 (mouse)Not determined1097217101130530862Mouse
11533919Mvb4_mmodifier of vibrator 4 (mouse)397217101130530862Mouse
11533921Mvb2_mmodifier of vibrator 2 (mouse)1097217101130530862Mouse
12880413V125Dq9_mvitamin D active form serum level QTL 9 (mouse)1097535905130530862Mouse
4141402T2dm1sa_mtype 2 diabetes mellitus 1 in SMXA RI mice (mouse)Not determined97758644130530862Mouse
11040593Lmr5e_mleishmaniasis resistance 5e (mouse)1099220635130530862Mouse
11040595Lmr5c_mleishmaniasis resistance 5c (mouse)1099220635130530862Mouse
11040597Lmr5a_mleishmaniasis resistance 5a (mouse)1099220635130530862Mouse
1357744Cfbw4_mcystic fibrosis body weight 4 (mouse)Not determined10100986516130530862Mouse
1301968Estq4_mestradiol regulated response QTL 4 (mouse)Not determined10100986516130530862Mouse
1301901Im5_mimmunoregulatory 5 (mouse)Not determined10101497164130530862Mouse
4141361Cfmq3_mcystic fibrosis modifier QTL 3 (mouse)Not determined10101497164130530862Mouse
1300678Leg2_mlongevity extending gene 2 (mouse)Not determined10102506908130530862Mouse
27226725Tibw1_mtibia width 1, proximal, 5 week (mouse)10102735861123235905Mouse
1301895Exq1_mexploratory and excitability QTL 1 (mouse)Not determined10102847852130530862Mouse
14696727Kidrq2_mkidney weight, right QTL 2 (mouse)10102902508130530862Mouse
4141007Obrq10_mobesity resistance QTL 10 (mouse)Not determined103243727130530862Mouse
4141487Tgq21_mtriglyceride QTL 21 (mouse)Not determined104110021130530862Mouse
14746996Manh69_mmandible shape 69 (mouse)10104763638130530862Mouse
1302200Sle12_msystematic lupus erythematosus susceptibility 12 (mouse)Not determined10105041304130530862Mouse
1357482Nhdlq4_mnon-HDL QTL 4 (mouse)Not determined10105041304130530862Mouse
1300679Nociq2_mnociceptive sensitivity inflammatory QTL 2 (mouse)Not determined10105041304130530862Mouse
4141269Ipng2_mimprinted postnatal growth 2 (mouse)Not determined105088254118497353Mouse
11040594Lmr5f_mleishmaniasis resistance 5f (mouse)10105179713130530862Mouse
11040596Lmr5d_mleishmaniasis resistance 5d (mouse)10105179713130530862Mouse
11040598Lmr5b_mleishmaniasis resistance 5b (mouse)10105179713130530862Mouse
4142089Obrq9_mobesity resistance QTL 9 (mouse)Not determined108515907130530862Mouse
4141153Ltgq2_mliver triglyceride QTL 2 (mouse)Not determined108515907130530862Mouse
11041664Lmr25_mleishmaniasis resistance 25 (mouse)10108575094130530862Mouse
11039496Ltpr5b_mLeishmania tropica response 5b (mouse)10108575094130530862Mouse
11049570Lmr25b_mleishmaniasis resistance 25b (mouse)10108575094130530862Mouse
11049563Lmr25a_mleishmaniasis resistance 25a (mouse)10108575094130530862Mouse
27226722Tibw7_mtibia width 7, proximal, 16 week (mouse)10108635861125435869Mouse
27095902Scvln11_msacral vertebrae length 2, 10 week (mouse)10110035861125435869Mouse
11353822Insq12_minsulin QTL 12 (mouse)10110453347125515907Mouse
11353823Homaq2_mhomeostatic model assessment QTL 2 (mouse)10110453347125515907Mouse
10412078Hylaq3_mHyperlocomotor activity related QTL 3 (mouse)Not determined10111568226117986649Mouse
26884391Skwq11_mskull length QTL 11, 16 week (mouse)10113535905121635905Mouse
26884433Zlq2_mzygomatic length QTL 2, 5 week (mouse)10113535905125735869Mouse
26884383Bzwq3_mbi-zygomatic width QTL 3, 5 week (mouse)10114235905122735905Mouse
13506931Recrq11_mrecombination rate in male meiosis QTL 11 (mouse)10114335905123635905Mouse
26884377Skwq3_mskull length QTL 3, 5 week (mouse)10114635905122735905Mouse
1300796Lmr5_mleishmaniasis resistance 5 (mouse)Not determined10116220635122179828Mouse

Markers in Region
RH126708  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3810116,485,995 - 116,486,206UniSTSGRCm38
MGSCv3710115,923,051 - 115,923,262UniSTSGRCm37
Celera10118,427,575 - 118,427,786UniSTS
Cytogenetic Map10D2UniSTS
Whitehead/MRC_RH101312.23UniSTS
RH136131  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3810116,518,859 - 116,519,035UniSTSGRCm38
MGSCv3710115,955,915 - 115,956,091UniSTSGRCm37
Celera10118,460,456 - 118,460,632UniSTS
Cytogenetic Map10D2UniSTS
RH136541  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3810116,498,751 - 116,498,991UniSTSGRCm38
MGSCv3710115,935,807 - 115,936,047UniSTSGRCm37
Celera10118,440,331 - 118,440,571UniSTS
Cytogenetic Map10D2UniSTS
AA959607  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3810116,485,658 - 116,485,743UniSTSGRCm38
MGSCv3710115,922,714 - 115,922,799UniSTSGRCm37
Celera10118,427,238 - 118,427,323UniSTS
Cytogenetic Map10D2UniSTS
Whitehead/MRC_RH101227.07UniSTS
Whitehead/MRC_RH101226.47UniSTS
RH124513  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3810116,485,656 - 116,485,747UniSTSGRCm38
MGSCv3710115,922,712 - 115,922,803UniSTSGRCm37
Celera10118,427,236 - 118,427,327UniSTS
Cytogenetic Map10D2UniSTS
UniSTS:236463  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3810116,582,360 - 116,582,565UniSTSGRCm38
MGSCv3710116,019,416 - 116,019,621UniSTSGRCm37
Celera10118,523,901 - 118,524,106UniSTS
Cytogenetic Map10D2UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001037846 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001037847 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001037848 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359247 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359248 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359249 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359250 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359251 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359252 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359253 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359563 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_028082 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006514174 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006514175 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006514181 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006514182 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006514183 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006514184 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006514186 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006514188 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006514189 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006514190 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006514191 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017314107 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017314111 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245296 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245297 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245299 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245300 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245301 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245302 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156033 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156036 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156037 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156038 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156039 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156040 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156041 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC139376 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI428917 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK011231 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK019295 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK078121 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK149767 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167834 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK172132 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK202363 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK205222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK214392 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB345568 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB353467 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC043133 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC063105 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC065171 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC090624 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BG067916 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM245866 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CD578905 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466539 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CX562783 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KY499703 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000020374   ⟹   ENSMUSP00000020374
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10116,345,696 - 116,417,416 (-)Ensembl
GRCm38.p6 Ensembl10116,509,791 - 116,581,511 (-)Ensembl
RefSeq Acc Id: ENSMUST00000105265   ⟹   ENSMUSP00000100900
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10116,321,414 - 116,417,406 (-)Ensembl
GRCm38.p6 Ensembl10116,485,509 - 116,581,501 (-)Ensembl
RefSeq Acc Id: ENSMUST00000105267   ⟹   ENSMUSP00000100902
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10116,321,071 - 116,417,405 (-)Ensembl
GRCm38.p6 Ensembl10116,485,166 - 116,581,500 (-)Ensembl
RefSeq Acc Id: ENSMUST00000164088   ⟹   ENSMUSP00000127830
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10116,321,070 - 116,385,068 (-)Ensembl
GRCm38.p6 Ensembl10116,485,165 - 116,549,163 (-)Ensembl
RefSeq Acc Id: ENSMUST00000164383
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10116,335,274 - 116,417,395 (-)Ensembl
GRCm38.p6 Ensembl10116,499,369 - 116,581,490 (-)Ensembl
RefSeq Acc Id: ENSMUST00000165527
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10116,345,696 - 116,417,401 (-)Ensembl
GRCm38.p6 Ensembl10116,509,791 - 116,581,496 (-)Ensembl
RefSeq Acc Id: ENSMUST00000166166
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10116,335,279 - 116,417,390 (-)Ensembl
GRCm38.p6 Ensembl10116,499,374 - 116,581,485 (-)Ensembl
RefSeq Acc Id: ENSMUST00000167644
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10116,346,065 - 116,417,388 (-)Ensembl
GRCm38.p6 Ensembl10116,510,160 - 116,581,483 (-)Ensembl
RefSeq Acc Id: ENSMUST00000167706   ⟹   ENSMUSP00000128837
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10116,322,102 - 116,417,407 (-)Ensembl
GRCm38.p6 Ensembl10116,486,197 - 116,581,502 (-)Ensembl
RefSeq Acc Id: ENSMUST00000168036   ⟹   ENSMUSP00000132315
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10116,321,066 - 116,417,416 (-)Ensembl
GRCm38.p6 Ensembl10116,485,161 - 116,581,511 (-)Ensembl
RefSeq Acc Id: ENSMUST00000169507   ⟹   ENSMUSP00000128720
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10116,339,945 - 116,417,370 (-)Ensembl
GRCm38.p6 Ensembl10116,504,040 - 116,581,465 (-)Ensembl
RefSeq Acc Id: ENSMUST00000169576   ⟹   ENSMUSP00000130192
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10116,321,070 - 116,417,401 (-)Ensembl
GRCm38.p6 Ensembl10116,485,165 - 116,581,496 (-)Ensembl
RefSeq Acc Id: ENSMUST00000169921   ⟹   ENSMUSP00000132152
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10116,321,692 - 116,417,416 (-)Ensembl
GRCm38.p6 Ensembl10116,485,787 - 116,581,511 (-)Ensembl
RefSeq Acc Id: ENSMUST00000169937
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10116,333,993 - 116,417,388 (-)Ensembl
GRCm38.p6 Ensembl10116,498,088 - 116,581,483 (-)Ensembl
RefSeq Acc Id: ENSMUST00000171214
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10116,334,243 - 116,417,398 (-)Ensembl
GRCm38.p6 Ensembl10116,498,338 - 116,581,493 (-)Ensembl
RefSeq Acc Id: ENSMUST00000171944
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10116,342,286 - 116,417,396 (-)Ensembl
GRCm38.p6 Ensembl10116,506,381 - 116,581,491 (-)Ensembl
RefSeq Acc Id: ENSMUST00000218490   ⟹   ENSMUSP00000151847
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10116,342,137 - 116,416,443 (-)Ensembl
GRCm38.p6 Ensembl10116,506,232 - 116,580,538 (-)Ensembl
RefSeq Acc Id: ENSMUST00000218744   ⟹   ENSMUSP00000151501
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10116,353,226 - 116,417,333 (-)Ensembl
GRCm38.p6 Ensembl10116,517,321 - 116,581,428 (-)Ensembl
RefSeq Acc Id: ENSMUST00000219544
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10116,333,890 - 116,335,383 (-)Ensembl
GRCm38.p6 Ensembl10116,497,985 - 116,499,478 (-)Ensembl
RefSeq Acc Id: NM_001037846   ⟹   NP_001032935
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,066 - 116,417,416 (-)NCBI
GRCm3810116,485,161 - 116,581,511 (-)NCBI
MGSCv3710115,922,217 - 116,018,567 (-)RGD
Celera10118,426,741 - 118,523,052 (-)RGD
cM Map10 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001037847   ⟹   NP_001032936
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,066 - 116,417,416 (-)NCBI
GRCm3810116,485,161 - 116,581,511 (-)NCBI
MGSCv3710115,922,217 - 116,018,567 (-)RGD
Celera10118,426,741 - 118,523,052 (-)RGD
cM Map10 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001037848   ⟹   NP_001032937
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,345,696 - 116,417,416 (-)NCBI
GRCm3810116,509,791 - 116,581,511 (-)NCBI
MGSCv3710115,922,217 - 116,018,567 (-)RGD
Celera10118,426,741 - 118,523,052 (-)RGD
cM Map10 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001359247   ⟹   NP_001346176
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,065 - 116,417,416 (-)NCBI
GRCm3810116,485,160 - 116,581,511 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001359248   ⟹   NP_001346177
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,065 - 116,416,441 (-)NCBI
GRCm3810116,485,160 - 116,580,536 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001359249   ⟹   NP_001346178
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,065 - 116,417,416 (-)NCBI
GRCm3810116,485,160 - 116,581,511 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001359250   ⟹   NP_001346179
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,065 - 116,416,441 (-)NCBI
GRCm3810116,485,160 - 116,580,536 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001359251   ⟹   NP_001346180
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,065 - 116,417,416 (-)NCBI
GRCm3810116,485,160 - 116,581,511 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001359252   ⟹   NP_001346181
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,065 - 116,416,441 (-)NCBI
GRCm3810116,485,160 - 116,580,536 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001359253   ⟹   NP_001346182
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,065 - 116,363,854 (-)NCBI
GRCm3810116,485,160 - 116,527,949 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001359563   ⟹   NP_001346492
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,065 - 116,417,416 (-)NCBI
GRCm3810116,485,160 - 116,581,511 (-)NCBI
Sequence:
RefSeq Acc Id: NM_028082   ⟹   NP_082358
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,066 - 116,417,416 (-)NCBI
GRCm3810116,485,161 - 116,581,511 (-)NCBI
MGSCv3710115,922,217 - 116,018,567 (-)RGD
Celera10118,426,741 - 118,523,052 (-)RGD
cM Map10 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006514174   ⟹   XP_006514237
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,074 - 116,417,897 (-)NCBI
GRCm3810116,485,165 - 116,581,530 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006514175   ⟹   XP_006514238
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,074 - 116,416,500 (-)NCBI
GRCm3810116,485,165 - 116,581,203 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006514181   ⟹   XP_006514244
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,074 - 116,417,802 (-)NCBI
GRCm3810116,485,165 - 116,581,897 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006514182   ⟹   XP_006514245
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,074 - 116,417,433 (-)NCBI
GRCm3810116,485,165 - 116,581,523 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006514183   ⟹   XP_006514246
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,070 - 116,417,441 (-)NCBI
GRCm3810116,485,165 - 116,581,536 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006514184   ⟹   XP_006514247
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,070 - 116,417,396 (-)NCBI
GRCm3810116,485,165 - 116,581,491 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006514186   ⟹   XP_006514249
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,070 - 116,417,904 (-)NCBI
GRCm3810116,485,165 - 116,581,530 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006514188   ⟹   XP_006514251
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,070 - 116,418,891 (-)NCBI
GRCm3810116,485,165 - 116,581,830 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006514189   ⟹   XP_006514252
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,070 - 116,417,441 (-)NCBI
GRCm3810116,485,165 - 116,581,536 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006514190   ⟹   XP_006514253
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,070 - 116,417,441 (-)NCBI
GRCm3810116,485,165 - 116,581,536 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006514191   ⟹   XP_006514254
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,070 - 116,417,384 (-)NCBI
GRCm3810116,485,165 - 116,581,488 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017314107   ⟹   XP_017169596
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,074 - 116,417,441 (-)NCBI
GRCm3810116,485,165 - 116,581,536 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017314111   ⟹   XP_017169600
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,070 - 116,417,441 (-)NCBI
GRCm3810116,485,165 - 116,581,536 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245296   ⟹   XP_030101156
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,074 - 116,416,500 (-)NCBI
GRCm3810116,485,165 - 116,581,204 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245297   ⟹   XP_030101157
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,074 - 116,417,805 (-)NCBI
GRCm3810116,485,165 - 116,581,900 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245299   ⟹   XP_030101159
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,070 - 116,417,770 (-)NCBI
GRCm3810116,485,165 - 116,581,500 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245300   ⟹   XP_030101160
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,070 - 116,417,435 (-)NCBI
GRCm3810116,485,165 - 116,581,530 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245301   ⟹   XP_030101161
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,070 - 116,417,441 (-)NCBI
GRCm3810116,485,165 - 116,581,536 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245302   ⟹   XP_030101162
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,070 - 116,417,441 (-)NCBI
GRCm3810116,485,165 - 116,581,536 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036156033   ⟹   XP_036011926
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,074 - 116,417,073 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036156034   ⟹   XP_036011927
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,074 - 116,417,079 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036156035   ⟹   XP_036011928
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,070 - 116,417,441 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036156036   ⟹   XP_036011929
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,070 - 116,417,441 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036156037   ⟹   XP_036011930
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,070 - 116,416,500 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036156038   ⟹   XP_036011931
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,070 - 116,417,405 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036156039   ⟹   XP_036011932
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,070 - 116,417,404 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036156040   ⟹   XP_036011933
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,070 - 116,417,385 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036156041   ⟹   XP_036011934
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,346,252 - 116,417,435 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001032935 (Get FASTA)   NCBI Sequence Viewer  
  NP_001032936 (Get FASTA)   NCBI Sequence Viewer  
  NP_001032937 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346176 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346177 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346178 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346179 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346180 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346181 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346182 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346492 (Get FASTA)   NCBI Sequence Viewer  
  NP_082358 (Get FASTA)   NCBI Sequence Viewer  
  XP_006514237 (Get FASTA)   NCBI Sequence Viewer  
  XP_006514238 (Get FASTA)   NCBI Sequence Viewer  
  XP_006514244 (Get FASTA)   NCBI Sequence Viewer  
  XP_006514245 (Get FASTA)   NCBI Sequence Viewer  
  XP_006514246 (Get FASTA)   NCBI Sequence Viewer  
  XP_006514247 (Get FASTA)   NCBI Sequence Viewer  
  XP_006514249 (Get FASTA)   NCBI Sequence Viewer  
  XP_006514251 (Get FASTA)   NCBI Sequence Viewer  
  XP_006514252 (Get FASTA)   NCBI Sequence Viewer  
  XP_006514253 (Get FASTA)   NCBI Sequence Viewer  
  XP_006514254 (Get FASTA)   NCBI Sequence Viewer  
  XP_017169596 (Get FASTA)   NCBI Sequence Viewer  
  XP_017169600 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101156 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101157 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101159 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101160 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101161 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101162 (Get FASTA)   NCBI Sequence Viewer  
  XP_036011926 (Get FASTA)   NCBI Sequence Viewer  
  XP_036011927 (Get FASTA)   NCBI Sequence Viewer  
  XP_036011928 (Get FASTA)   NCBI Sequence Viewer  
  XP_036011929 (Get FASTA)   NCBI Sequence Viewer  
  XP_036011930 (Get FASTA)   NCBI Sequence Viewer  
  XP_036011931 (Get FASTA)   NCBI Sequence Viewer  
  XP_036011932 (Get FASTA)   NCBI Sequence Viewer  
  XP_036011933 (Get FASTA)   NCBI Sequence Viewer  
  XP_036011934 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH43133 (Get FASTA)   NCBI Sequence Viewer  
  AAH63105 (Get FASTA)   NCBI Sequence Viewer  
  AAH65171 (Get FASTA)   NCBI Sequence Viewer  
  AAH90624 (Get FASTA)   NCBI Sequence Viewer  
  AQS27624 (Get FASTA)   NCBI Sequence Viewer  
  BAB27481 (Get FASTA)   NCBI Sequence Viewer  
  BAC37134 (Get FASTA)   NCBI Sequence Viewer  
  BAE29072 (Get FASTA)   NCBI Sequence Viewer  
  BAE39856 (Get FASTA)   NCBI Sequence Viewer  
  EDL21790 (Get FASTA)   NCBI Sequence Viewer  
  EDL21791 (Get FASTA)   NCBI Sequence Viewer  
  EDL21792 (Get FASTA)   NCBI Sequence Viewer  
  EDL21793 (Get FASTA)   NCBI Sequence Viewer  
  EDL21794 (Get FASTA)   NCBI Sequence Viewer  
  EDL21795 (Get FASTA)   NCBI Sequence Viewer  
  EDL21796 (Get FASTA)   NCBI Sequence Viewer  
  EDL21797 (Get FASTA)   NCBI Sequence Viewer  
  EDL21798 (Get FASTA)   NCBI Sequence Viewer  
  EDL21799 (Get FASTA)   NCBI Sequence Viewer  
  EDL21800 (Get FASTA)   NCBI Sequence Viewer  
  EDL21801 (Get FASTA)   NCBI Sequence Viewer  
  EDL21802 (Get FASTA)   NCBI Sequence Viewer  
  EDL21803 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000020374
  ENSMUSP00000020374.6
  ENSMUSP00000100900
  ENSMUSP00000100900.2
  ENSMUSP00000100902
  ENSMUSP00000100902.2
  ENSMUSP00000127830.2
  ENSMUSP00000128720.2
  ENSMUSP00000128837.2
  ENSMUSP00000130192.2
  ENSMUSP00000132152.2
  ENSMUSP00000132315
  ENSMUSP00000132315.2
  ENSMUSP00000151501.2
  ENSMUSP00000151847.2
GenBank Protein Q8C5L3 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001032935   ⟸   NM_001037846
- Peptide Label: isoform a
- UniProtKB: Q80YA5 (UniProtKB/Swiss-Prot),   Q3UE39 (UniProtKB/Swiss-Prot),   Q9D0P1 (UniProtKB/Swiss-Prot),   Q8C5L3 (UniProtKB/Swiss-Prot),   Q3TIJ0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_082358   ⟸   NM_028082
- Peptide Label: isoform b
- UniProtKB: E9Q027 (UniProtKB/TrEMBL),   Q5CZY5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001032936   ⟸   NM_001037847
- Peptide Label: isoform d
- UniProtKB: A0A1S6GWJ6 (UniProtKB/TrEMBL),   Q3TIJ0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001032937   ⟸   NM_001037848
- Peptide Label: isoform c
- UniProtKB: H7BWX6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006514244   ⟸   XM_006514181
- Peptide Label: isoform X3
- UniProtKB: Q3TIJ0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006514237   ⟸   XM_006514174
- Peptide Label: isoform X1
- UniProtKB: Q5CZY5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006514247   ⟸   XM_006514184
- Peptide Label: isoform X5
- UniProtKB: Q5CZY5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006514254   ⟸   XM_006514191
- Peptide Label: isoform X11
- Sequence:
RefSeq Acc Id: XP_006514249   ⟸   XM_006514186
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_006514245   ⟸   XM_006514182
- Peptide Label: isoform X4
- UniProtKB: Q3TIJ0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006514252   ⟸   XM_006514189
- Peptide Label: isoform X10
- Sequence:
RefSeq Acc Id: XP_006514253   ⟸   XM_006514190
- Peptide Label: isoform X11
- Sequence:
RefSeq Acc Id: XP_006514246   ⟸   XM_006514183
- Peptide Label: isoform X5
- UniProtKB: Q5CZY5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006514251   ⟸   XM_006514188
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: XP_006514238   ⟸   XM_006514175
- Peptide Label: isoform X2
- UniProtKB: Q80YA5 (UniProtKB/Swiss-Prot),   Q3UE39 (UniProtKB/Swiss-Prot),   Q9D0P1 (UniProtKB/Swiss-Prot),   Q8C5L3 (UniProtKB/Swiss-Prot),   Q3TIJ0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017169600   ⟸   XM_017314111
- Peptide Label: isoform X9
- Sequence:
RefSeq Acc Id: XP_017169596   ⟸   XM_017314107
- Peptide Label: isoform X3
- UniProtKB: Q3TIJ0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001346176   ⟸   NM_001359247
- Peptide Label: isoform e
- UniProtKB: Q3TIJ0 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001346492   ⟸   NM_001359563
- Peptide Label: isoform g
- UniProtKB: Q5CZY5 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001346180   ⟸   NM_001359251
- Peptide Label: isoform e
- UniProtKB: Q3TIJ0 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001346178   ⟸   NM_001359249
- Peptide Label: isoform e
- UniProtKB: Q3TIJ0 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001346179   ⟸   NM_001359250
- Peptide Label: isoform e
- UniProtKB: Q3TIJ0 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001346177   ⟸   NM_001359248
- Peptide Label: isoform e
- UniProtKB: Q3TIJ0 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001346181   ⟸   NM_001359252
- Peptide Label: isoform e
- UniProtKB: Q3TIJ0 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001346182   ⟸   NM_001359253
- Peptide Label: isoform f
RefSeq Acc Id: XP_030101157   ⟸   XM_030245297
- Peptide Label: isoform X3
- UniProtKB: Q3TIJ0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030101162   ⟸   XM_030245302
- Peptide Label: isoform X11
RefSeq Acc Id: XP_030101161   ⟸   XM_030245301
- Peptide Label: isoform X9
RefSeq Acc Id: XP_030101160   ⟸   XM_030245300
- Peptide Label: isoform X7
RefSeq Acc Id: XP_030101159   ⟸   XM_030245299
- Peptide Label: isoform X5
- UniProtKB: Q5CZY5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030101156   ⟸   XM_030245296
- Peptide Label: isoform X2
- UniProtKB: Q8C5L3 (UniProtKB/Swiss-Prot),   Q80YA5 (UniProtKB/Swiss-Prot),   Q3UE39 (UniProtKB/Swiss-Prot),   Q9D0P1 (UniProtKB/Swiss-Prot),   Q3TIJ0 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000151501   ⟸   ENSMUST00000218744
RefSeq Acc Id: ENSMUSP00000151847   ⟸   ENSMUST00000218490
RefSeq Acc Id: ENSMUSP00000100900   ⟸   ENSMUST00000105265
RefSeq Acc Id: ENSMUSP00000100902   ⟸   ENSMUST00000105267
RefSeq Acc Id: ENSMUSP00000127830   ⟸   ENSMUST00000164088
RefSeq Acc Id: ENSMUSP00000020374   ⟸   ENSMUST00000020374
RefSeq Acc Id: ENSMUSP00000130192   ⟸   ENSMUST00000169576
RefSeq Acc Id: ENSMUSP00000128720   ⟸   ENSMUST00000169507
RefSeq Acc Id: ENSMUSP00000132315   ⟸   ENSMUST00000168036
RefSeq Acc Id: ENSMUSP00000128837   ⟸   ENSMUST00000167706
RefSeq Acc Id: ENSMUSP00000132152   ⟸   ENSMUST00000169921
RefSeq Acc Id: XP_036011928   ⟸   XM_036156035
- Peptide Label: isoform X5
- UniProtKB: Q5CZY5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036011929   ⟸   XM_036156036
- Peptide Label: isoform X5
- UniProtKB: Q5CZY5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036011931   ⟸   XM_036156038
- Peptide Label: isoform X9
RefSeq Acc Id: XP_036011932   ⟸   XM_036156039
- Peptide Label: isoform X9
RefSeq Acc Id: XP_036011933   ⟸   XM_036156040
- Peptide Label: isoform X11
RefSeq Acc Id: XP_036011930   ⟸   XM_036156037
- Peptide Label: isoform X9
RefSeq Acc Id: XP_036011927   ⟸   XM_036156034
- Peptide Label: isoform X3
- UniProtKB: Q3TIJ0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036011926   ⟸   XM_036156033
- Peptide Label: isoform X3
- UniProtKB: Q3TIJ0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036011934   ⟸   XM_036156041
- Peptide Label: isoform X12
Protein Domains
NOT2/NOT3/NOT5 C-terminal

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8C5L3-F1-model_v2 AlphaFold Q8C5L3 1-540 view protein structure

Promoters
RGD ID:6819119
Promoter ID:MM_KWN:5666
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:ENSMUST00000105266
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3610115,974,506 - 115,975,006 (-)MPROMDB
RGD ID:8673332
Promoter ID:EPDNEW_M14682
Type:multiple initiation site
Name:Cnot2_2
Description:Mus musculus CCR4-NOT transcription complex, subunit 2 , transcriptvariant 4, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M14683  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3810116,559,278 - 116,559,338EPDNEW
RGD ID:8673304
Promoter ID:EPDNEW_M14683
Type:multiple initiation site
Name:Cnot2_1
Description:Mus musculus CCR4-NOT transcription complex, subunit 2 , transcriptvariant 4, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M14682  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3810116,581,500 - 116,581,560EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1919318 AgrOrtholog
Ensembl Genes ENSMUSG00000020166 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000020374 ENTREZGENE
  ENSMUST00000020374.6 UniProtKB/TrEMBL
  ENSMUST00000105265 ENTREZGENE
  ENSMUST00000105265.8 UniProtKB/Swiss-Prot
  ENSMUST00000105267 ENTREZGENE
  ENSMUST00000105267.8 UniProtKB/Swiss-Prot
  ENSMUST00000164088.8 UniProtKB/TrEMBL
  ENSMUST00000167706.8 UniProtKB/TrEMBL
  ENSMUST00000168036 ENTREZGENE
  ENSMUST00000168036.8 UniProtKB/TrEMBL
  ENSMUST00000169507.8 UniProtKB/TrEMBL
  ENSMUST00000169576.8 UniProtKB/TrEMBL
  ENSMUST00000169921.8 UniProtKB/Swiss-Prot
  ENSMUST00000218490.2 UniProtKB/TrEMBL
  ENSMUST00000218744.2 UniProtKB/TrEMBL
Gene3D-CATH 2.30.30.1020 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro CCR4-NOT_su2/3/5_N_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Not2/3/5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NOT2/3/5_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:72068 UniProtKB/Swiss-Prot
MGD MGI:1919318 ENTREZGENE
NCBI Gene 72068 ENTREZGENE
PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR23326 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam NOT2_3_5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Cnot2 PhenoGen
UniProt A0A1S6GWJ6 ENTREZGENE, UniProtKB/TrEMBL
  A0A1W2P771_MOUSE UniProtKB/TrEMBL
  CNOT2_MOUSE UniProtKB/Swiss-Prot
  E9Q027 ENTREZGENE, UniProtKB/TrEMBL
  E9Q7M5_MOUSE UniProtKB/TrEMBL
  E9Q8D5_MOUSE UniProtKB/TrEMBL
  E9Q8R6_MOUSE UniProtKB/TrEMBL
  H7BWX6 ENTREZGENE, UniProtKB/TrEMBL
  Q3TIJ0 ENTREZGENE, UniProtKB/TrEMBL
  Q3UE39 ENTREZGENE
  Q5CZY5 ENTREZGENE, UniProtKB/TrEMBL
  Q80YA5 ENTREZGENE
  Q8C5L3 ENTREZGENE
  Q9D0P1 ENTREZGENE
UniProt Secondary Q3UE39 UniProtKB/Swiss-Prot
  Q80YA5 UniProtKB/Swiss-Prot
  Q9D0P1 UniProtKB/Swiss-Prot