Cnot2 (CCR4-NOT transcription complex subunit 2)

Gene: Cnot2 (CCR4-NOT transcription complex subunit 2) Ictidomys tridecemlineatus

Analyze

Symbol:

Cnot2

Name:

CCR4-NOT transcription complex subunit 2

RGD ID:

12451590

Description:

ENCODES a protein that exhibits poly(A)-specific ribonuclease activity (ortholog); INVOLVED IN negative regulation of intracellular estrogen receptor signaling pathway (inferred); negative regulation of transcription by RNA polymerase II (inferred); nuclear-transcribed mRNA poly(A) tail shortening (inferred); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH genetic disease (ortholog); Intellectual Developmental Disorder with Nasal Speech, Dysmorphic Facies, and Variable Skeletal Anomalies (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN CCR4-NOT complex (inferred); CCR4-NOT core complex (inferred); cytoplasm (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

CCR4-NOT transcription complex subunit 2, transcript variant X1; CCR4-NOT transcription complex subunit 2, transcript variant X2; CCR4-NOT transcription complex subunit 2, transcript variant X3; CCR4-NOT transcription complex subunit 2, transcript variant X4; CCR4-NOT transcription complex subunit 2, transcript variant X5; CCR4-NOT transcription complex subunit 2, transcript variant X6; CCR4-NOT transcription complex subunit 2, transcript variant X7; CCR4-NOT transcription complex subunit 2, transcript variant X8

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	46,069,715 - 46,170,762 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936545	7,938,934 - 8,042,117 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936545	7,938,934 - 8,040,409 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Intellectual Developmental Disorder with Nasal Speech, Dysmorphic Facies, and Variable Skeletal Anomalies (ISO)

Neurodevelopmental Disorders (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

negative regulation of intracellular estrogen receptor signaling pathway (IEA)

negative regulation of transcription by RNA polymerase II (IEA)

nuclear-transcribed mRNA poly(A) tail shortening (IEA)

positive regulation of cytoplasmic mRNA processing body assembly (IEA)

regulation of DNA-templated transcription (IEA)

regulation of stem cell population maintenance (IEA)

trophectodermal cell differentiation (IEA)

Cellular Component

CCR4-NOT complex (IEA)

CCR4-NOT core complex (IEA)

cytoplasm (IEA)

cytosol (IEA)

nucleoplasm (IEA)

P-body (IEA)

plasma membrane (IEA)

Molecular Function

poly(A)-specific ribonuclease activity (IEA,ISO)

protein binding (ISO)

transcription corepressor binding (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

microRNA pathway (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Cnot2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	46,069,715 - 46,170,762 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936545	7,938,934 - 8,042,117 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936545	7,938,934 - 8,040,409 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CNOT2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	70,243,018 - 70,354,993 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	70,243,002 - 70,354,993 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	12	70,636,798 - 70,748,773 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	68,923,044 - 69,035,040 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	12	68,923,488 - 69,033,960	NCBI
Celera	12	70,300,448 - 70,412,447 (+)	NCBI		Celera
Cytogenetic Map	12	q15	NCBI
HuRef	12	67,686,934 - 67,798,932 (+)	NCBI		HuRef
CHM1_1	12	70,606,077 - 70,718,081 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	12	70,222,411 - 70,334,463 (+)	NCBI		T2T-CHM13v2.0

Cnot2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	116,321,065 - 116,418,891 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	116,321,066 - 116,417,416 (-)	Ensembl		GRCm39 Ensembl
GRCm38	10	116,485,160 - 116,581,900 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	116,485,161 - 116,581,511 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	115,922,217 - 116,018,567 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	10	115,889,276 - 115,985,621 (-)	NCBI		MGSCv36	mm8
Celera	10	118,426,741 - 118,523,052 (-)	NCBI		Celera
Cytogenetic Map	10	D2	NCBI
cM Map	10	64.76	NCBI

Cnot2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	54,016,447 - 54,117,511 (-)	NCBI		GRCr8
mRatBN7.2	7	52,130,445 - 52,222,338 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	52,130,441 - 52,223,575 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	54,037,151 - 54,128,665 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	56,240,245 - 56,331,759 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	56,018,227 - 56,109,741 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	59,526,105 - 59,617,307 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	59,527,124 - 59,587,385 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	59,537,579 - 59,628,786 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	55,823,982 - 55,880,812 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	7	55,844,724 - 55,901,542 (-)	NCBI
Celera	7	48,914,667 - 48,971,519 (-)	NCBI		Celera
Cytogenetic Map	7	q22	NCBI

Cnot2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955405	10,451,414 - 10,547,229 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955405	10,451,414 - 10,547,229 (+)	NCBI	ChiLan1.0	ChiLan1.0

CNOT2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	78,258,520 - 78,370,806 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	78,255,483 - 78,367,205 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	67,753,703 - 67,865,375 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	70,520,722 - 70,633,149 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	12	70,520,722 - 70,633,149 (+)	Ensembl	panpan1.1		panPan2

CNOT2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	10	12,057,269 - 12,174,405 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	10	12,009,762 - 12,172,427 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	10	11,995,863 - 12,112,451 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	10	12,188,879 - 12,305,324 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	10	12,141,268 - 12,305,312 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	10	12,055,404 - 12,171,985 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	10	12,302,721 - 12,419,265 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	10	12,426,002 - 12,542,252 (+)	NCBI		UU_Cfam_GSD_1.0

CNOT2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	34,426,394 - 34,549,310 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	5	34,470,911 - 34,548,968 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	37,132,108 - 37,207,783 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CNOT2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	65,823,294 - 65,932,588 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	11	65,861,353 - 65,934,042 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666037	179,752,841 - 179,862,945 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cnot2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624750	27,430,575 - 27,529,081 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624750	27,433,671 - 27,529,545 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005328740	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005328741	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013360125	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013360126	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013360127	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013360130	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021728705	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021728706	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040280322	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040280323	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040280324	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSTOT00000011114 ⟹ ENSSTOP00000009969

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936545	7,974,296 - 8,039,354 (+)	Ensembl

RefSeq Acc Id:

ENSSTOT00000030847 ⟹ ENSSTOP00000029570

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936545	7,939,350 - 8,042,117 (+)	Ensembl

RefSeq Acc Id:

ENSSTOT00000042452 ⟹ ENSSTOP00000025045

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936545	7,938,934 - 8,042,117 (+)	Ensembl

RefSeq Acc Id:

XM_005328740 ⟹ XP_005328797

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404945	46,069,715 - 46,170,754 (-)	NCBI
SpeTri2.0	NW_004936545	7,939,442 - 8,040,409 (+)	NCBI

Sequence:

show sequence

TCCGCGGTGGATACGTCGCCATCTTGGATCCGCGGGACAAGAAAATTCATGCGTACTGTGAGGA
AAGGACAAGACTCTATGGTGAGGACTGATGGACATACATTATCTGAGAAAAGAAACTACCAGGT
GACAAACAGCATGTTTGGTGCTTCAAGAAAGAAGTTTGTAGAGGGGGTCGACAGTGACTACCAT
GACGAAAACATGTACTACAGCCAGTCTTCTATGTTCCCACATCGGTCAGAAAAAGATATGCTGG
CATCACCATCTACATCAGGTCAGCTGTCTCAGTTTGGGGCAAGTTTATACGGGCAACAAAGTGC
ACTAGGCCTTCCAATGAGGGGAATGAGCAACAATACCCCTCAGTTAAATCGCAGCTTATCACAA
GGCACTCAGTTACCGAGCCACGTCACGCCAACAACAGGGGTACCAACAATGTCACTTCACACGC
CTCCATCTCCAAGCAGGGGTATTTTGCCTATGAATCCTAGGAATATGATGAACCACTCCCAGGT
TGGTCAGGGCATTGGAATTCCTAGCAGGACAAATAGCATGAGCAGTTCAGGGTTAGGTAGCCCC
AACAGAAGCTCGCCAAGCATAATATGTATGCCAAAGCAGCAGCCTTCTCGACAGCCTTTTACTG
TGAACAGTATGTCTGGATTTGGAATGAACAGGAATCAGGCATTTGGAATGAATAACTCCTTATC
AAGTAACATTTTTAATGGAACAGATGGAAGTGAAAATGTGACAGGATTGGACCTTTCAGATTTT
CCAGCATTAGCAGACCGAAACAGAAGGGAAGGAAGTGGTAACCCAACTCCATTAATAAACCCCT
TGGCTGGAAGAGCTCCATATGTTGGAATGGTAACAAAACCAGCAAATGAGCAATCCCAGGACTT
CTCAATACACAATGAAGATTTTCCAGCATTACCTGGTTCCAGCTATAAAGATCCAACCTCAAGT
AATGATGACAGTAAATCTAATTTGAATACATCTGGCAAGCCAACTTCAAGTACAGATGGACCCA
AATTCCCTGGAGATAAAAGTTCAACAACACAAAATAATAATCAGCAGAAAAAAGGGATCCAGGT
GTTACCTGATGGTCGGGTTACTAACATTCCTCAAGGAATGGTGACGGACCAATTTGGAATGATT
GGCCTGTTAACATTTATCAGGGCAGCAGAGACAGACCCAGGAATGGTACATCTTGCTTTAGGAA
GTGACTTAACAACATTAGGCCTCAATCTGAACTCTCCTGAAAATCTCTACCCCAAATTTGCATC
ACCCTGGGCATCTTCACCTTGTCGACCTCAAGACATAGACTTCCATGTTCCATCTGAGTACTTA
ACGAACATTCACATTAGGGATAAGCTGGCTGCAATAAAACTTGGTCGATATGGAGAAGACCTTC
TCTTCTATCTCTATTACATGAATGGAGGAGACGTATTACAACTTTTAGCTGCAGTAGAGCTTTT
TAATCGTGATTGGAGATATCACAAAGAAGAACGAGTATGGATTACCAGAGCACCAGGCATGGAA
CCAACAATGAAAACCAATACATATGAGAGGGGAACATATTACTTCTTTGACTGTCTTAACTGGA
GGAAAGTAGCTAAGGAGTTCCATCTGGAATATGATAAATTAGAAGAACGGCCTCATCTGCCATC
CACCTTCAACTACAACCCTGCTCAACAAGCCTTCTAAAAAGACTTCCCTTTTCTTGGGGTATGG
CTGTCTCAGCACAATACTCAACATAACTGCAGAACTGATGTGGCTCAGGCACCCTGGTTGTAAT
TCCTTGAGGATCTGGCAATTGGCTTACGCAAAGGGTCACCATTTGAGGTCCTGCCTTACTAATT
ATGTGCTGCCCAACAACTAAATTTGTAATTTGTTTTTCTCTAGTTTGAGCAGGGTCTGAATTTT
TTCATTTATTTTCATTTTTGCCAGCAGACAGACTTGGGTCTGTAAAGACAAGCAAGTACACTGA
CAGAAGTTTACCATTTAGTTTCTTATATGTAAAAAAGAAAACCCACAAAAGACTCAACAAAATT
AGACCACAAAATTTGCTTTGTTCATTGTAGCACTATTGGTAATAAAATAACAAATGTTTGTGCA
TTTTTATGTGAAGATCCTTCTCGTATTTCATTTGGAAAGATGAGCAAGGTCTGCTTCCTTCATT
TTACTTCCCCTTCTGTTTTTGAAAGGCAGTTTCGCCAAGCTTAACGCAAGAATATCTGACTGTT
TAAAAGAATGATATTGCCACAATCTCTGGATGGTCTCCAGGGTTGTGTTATTACTGAGCTTCAT
CTTTCCAGAATGAGCAAAACACTGTCCAGTCTTTGTTACGATTTTGTAATAAATGTGTACATTT
TTTTTAAATTTTTGGACATCACATGAATAAAGGTATGTATGTACGAATGTGTATATATTATATA
TATGACATCTATTTTGGAAAATGTTTGCCCTGCTGTACCTCATTTTTAGGAGGTGTGCATGGAT
GCAATATATGAAAATGGGACATTCTGGAACTGCTGGTCAGGGGACTTTGTCGCCCTGTGCACTA
AAGGGCCAGATTTTCAGCAGCCAAGGACATCCATACCCAAGTGAATGTGATGGGACTTAAAGAA
GTGAACTGAGACAATTCACTCTGGCTGTTTGAACAGCAGCGTTTCATAGGAAGAGAAAAAAAGA
TCAATCTTGTATTTTCTGACCACATAAAGGCTTCTTCTCTTTGTAATAAAGTAGAAAAGCTCTC
CTCA

hide sequence

RefSeq Acc Id:

XM_005328741 ⟹ XP_005328798

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404945	46,069,715 - 46,170,762 (-)	NCBI
SpeTri2.0	NW_004936545	7,938,934 - 8,040,409 (+)	NCBI

Sequence:

show sequence

AGGGGCTGGGGAAGGAAACAAGACGGCCATCAGATTTGCTCCAAGAGGTGCGAGGGCGCCGGTC
TCGAAGCGGACGTGGTGGGGGGGCGGGGAACAGGACACAAACACAAACACAAACACGCTCAGCG
TCCCCCAGGTGGGCGGACCGACGCCACCTCACCATTCCCCGCCCCTGGACCCCGCGGCCCCCCT
CGGACTCAAGGCCGGAGCCCAGTGCGAAGCAACCTGGCTTTAGGAGCAAGGCAGCTGCCGCAAA
GGCCCCGCTCACTGTAACGGCCGCGGAGCGACAAGCCTTTCAGTCAGTAGGTAGGAGACAACGT
AGAGTCTCGATGCGGGCGGTGGGGGAGTGAAGCATTTCTCCTCTTCCTCTCACAAGCGCGCGGG
AAGCAGCTTACCCACCCCCAACTCTGTCGCAGCTCCCACCTTCCGCCGCCGCCGCCTTGAGGGA
AGTCGGAGCGACGGGGGTCACGGCGGGGGTCAGAGGGTAAAGGTCTTGCTCCCAGCAGCCTCCG
CGGTGGATACGTCGCCATCTTGGATCCGCGGGACAAGAAAATTCATGCGAGGGAGAACTGGTGG
GCGGTCCTTCCTGTGACACGACCCTTGAGTGACAGTTCTATTTGATTGCCTCCAGTACTGTGAG
GAAAGGACAAGACTCTATGGTGAGGACTGATGGACATACATTATCTGAGAAAAGAAACTACCAG
GTGACAAACAGCATGTTTGGTGCTTCAAGAAAGAAGTTTGTAGAGGGGGTCGACAGTGACTACC
ATGACGAAAACATGTACTACAGCCAGTCTTCTATGTTCCCACATCGGTCAGAAAAAGATATGCT
GGCATCACCATCTACATCAGGTCAGCTGTCTCAGTTTGGGGCAAGTTTATACGGGCAACAAAGT
GCACTAGGCCTTCCAATGAGGGGAATGAGCAACAATACCCCTCAGTTAAATCGCAGCTTATCAC
AAGGCACTCAGTTACCGAGCCACGTCACGCCAACAACAGGGGTACCAACAATGTCACTTCACAC
GCCTCCATCTCCAAGCAGGGGTATTTTGCCTATGAATCCTAGGAATATGATGAACCACTCCCAG
GTTGGTCAGGGCATTGGAATTCCTAGCAGGACAAATAGCATGAGCAGTTCAGGGTTAGGTAGCC
CCAACAGAAGCTCGCCAAGCATAATATGTATGCCAAAGCAGCAGCCTTCTCGACAGCCTTTTAC
TGTGAACAGTATGTCTGGATTTGGAATGAACAGGAATCAGGCATTTGGAATGAATAACTCCTTA
TCAAGTAACATTTTTAATGGAACAGATGGAAGTGAAAATGTGACAGGATTGGACCTTTCAGATT
TTCCAGCATTAGCAGACCGAAACAGAAGGGAAGGAAGTGGTAACCCAACTCCATTAATAAACCC
CTTGGCTGGAAGAGCTCCATATGTTGGAATGGTAACAAAACCAGCAAATGAGCAATCCCAGGAC
TTCTCAATACACAATGAAGATTTTCCAGCATTACCTGGTTCCAGCTATAAAGATCCAACCTCAA
GTAATGATGACAGTAAATCTAATTTGAATACATCTGGCAAGCCAACTTCAAGTACAGATGGACC
CAAATTCCCTGGAGATAAAAGTTCAACAACACAAAATAATAATCAGCAGAAAAAAGGGATCCAG
GTGTTACCTGATGGTCGGGTTACTAACATTCCTCAAGGAATGGTGACGGACCAATTTGGAATGA
TTGGCCTGTTAACATTTATCAGGGCAGCAGAGACAGACCCAGGAATGGTACATCTTGCTTTAGG
AAGTGACTTAACAACATTAGGCCTCAATCTGAACTCTCCTGAAAATCTCTACCCCAAATTTGCA
TCACCCTGGGCATCTTCACCTTGTCGACCTCAAGACATAGACTTCCATGTTCCATCTGAGTACT
TAACGAACATTCACATTAGGGATAAGCTGGCTGCAATAAAACTTGGTCGATATGGAGAAGACCT
TCTCTTCTATCTCTATTACATGAATGGAGGAGACGTATTACAACTTTTAGCTGCAGTAGAGCTT
TTTAATCGTGATTGGAGATATCACAAAGAAGAACGAGTATGGATTACCAGAGCACCAGGCATGG
AACCAACAATGAAAACCAATACATATGAGAGGGGAACATATTACTTCTTTGACTGTCTTAACTG
GAGGAAAGTAGCTAAGGAGTTCCATCTGGAATATGATAAATTAGAAGAACGGCCTCATCTGCCA
TCCACCTTCAACTACAACCCTGCTCAACAAGCCTTCTAAAAAGACTTCCCTTTTCTTGGGGTAT
GGCTGTCTCAGCACAATACTCAACATAACTGCAGAACTGATGTGGCTCAGGCACCCTGGTTGTA
ATTCCTTGAGGATCTGGCAATTGGCTTACGCAAAGGGTCACCATTTGAGGTCCTGCCTTACTAA
TTATGTGCTGCCCAACAACTAAATTTGTAATTTGTTTTTCTCTAGTTTGAGCAGGGTCTGAATT
TTTTCATTTATTTTCATTTTTGCCAGCAGACAGACTTGGGTCTGTAAAGACAAGCAAGTACACT
GACAGAAGTTTACCATTTAGTTTCTTATATGTAAAAAAGAAAACCCACAAAAGACTCAACAAAA
TTAGACCACAAAATTTGCTTTGTTCATTGTAGCACTATTGGTAATAAAATAACAAATGTTTGTG
CATTTTTATGTGAAGATCCTTCTCGTATTTCATTTGGAAAGATGAGCAAGGTCTGCTTCCTTCA
TTTTACTTCCCCTTCTGTTTTTGAAAGGCAGTTTCGCCAAGCTTAACGCAAGAATATCTGACTG
TTTAAAAGAATGATATTGCCACAATCTCTGGATGGTCTCCAGGGTTGTGTTATTACTGAGCTTC
ATCTTTCCAGAATGAGCAAAACACTGTCCAGTCTTTGTTACGATTTTGTAATAAATGTGTACAT
TTTTTTTAAATTTTTGGACATCACATGAATAAAGGTATGTATGTACGAATGTGTATATATTATA
TATATGACATCTATTTTGGAAAATGTTTGCCCTGCTGTACCTCATTTTTAGGAGGTGTGCATGG
ATGCAATATATGAAAATGGGACATTCTGGAACTGCTGGTCAGGGGACTTTGTCGCCCTGTGCAC
TAAAGGGCCAGATTTTCAGCAGCCAAGGACATCCATACCCAAGTGAATGTGATGGGACTTAAAG
AAGTGAACTGAGACAATTCACTCTGGCTGTTTGAACAGCAGCGTTTCATAGGAAGAGAAAAAAA
GATCAATCTTGTATTTTCTGACCACATAAAGGCTTCTTCTCTTTGTAATAAAGTAGAAAAGCTC
TCCTCA

hide sequence

RefSeq Acc Id:

XM_013360125 ⟹ XP_013215579

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404945	46,069,715 - 46,135,923 (-)	NCBI
SpeTri2.0	NW_004936545	7,939,436 - 8,040,409 (+)	NCBI

Sequence:

show sequence

GCAGCCTCCGCGGTGGATACGTCGCCATCTTGGATCCGCGGGACAAGAAAATTCATGCGAGGGA
GAACTGGTGGGCGGTCCTTCCTGTGACACGACCCTTGAGTGACAGTTCTATTTGATTGCCTCCA
GTACTGTGAGGAAAGGACAAGACTCTATGGTGAGGACTGATGGACATACATTATCTGAGAAAAG
AAACTACCAGAGCAGAAGAATCCCATCGTTTATCATGTTCTGGTTGGACTCCTTTCTTATCGTT
TGCTGGAGTTTGAACTTCAGAGCTATGGTGTCAACCCTGCTGTAATATCTCAGGGGAGCTCCTA
GTGTGGGGCTGGTGCCATGGCTCACCCTCCAACCTTTCCTTCTTCACTTCAGCCTCCAGCTCTG
AGCTTTCCAATCCCCAGAGTAGCAAATGTTGAAAGAAGTTGCACAGGTGACAAACAGCATGTTT
GGTGCTTCAAGAAAGAAGTTTGTAGAGGGGGTCGACAGTGACTACCATGACGAAAACATGTACT
ACAGCCAGTCTTCTATGTTCCCACATCGGTCAGAAAAAGATATGCTGGCATCACCATCTACATC
AGGTCAGCTGTCTCAGTTTGGGGCAAGTTTATACGGGCAACAAAGTGCACTAGGCCTTCCAATG
AGGGGAATGAGCAACAATACCCCTCAGTTAAATCGCAGCTTATCACAAGGCACTCAGTTACCGA
GCCACGTCACGCCAACAACAGGGGTACCAACAATGTCACTTCACACGCCTCCATCTCCAAGCAG
GGGTATTTTGCCTATGAATCCTAGGAATATGATGAACCACTCCCAGGTTGGTCAGGGCATTGGA
ATTCCTAGCAGGACAAATAGCATGAGCAGTTCAGGGTTAGGTAGCCCCAACAGAAGCTCGCCAA
GCATAATATGTATGCCAAAGCAGCAGCCTTCTCGACAGCCTTTTACTGTGAACAGTATGTCTGG
ATTTGGAATGAACAGGAATCAGGCATTTGGAATGAATAACTCCTTATCAAGTAACATTTTTAAT
GGAACAGATGGAAGTGAAAATGTGACAGGATTGGACCTTTCAGATTTTCCAGCATTAGCAGACC
GAAACAGAAGGGAAGGAAGTGGTAACCCAACTCCATTAATAAACCCCTTGGCTGGAAGAGCTCC
ATATGTTGGAATGGTAACAAAACCAGCAAATGAGCAATCCCAGGACTTCTCAATACACAATGAA
GATTTTCCAGCATTACCTGGTTCCAGCTATAAAGATCCAACCTCAAGTAATGATGACAGTAAAT
CTAATTTGAATACATCTGGCAAGCCAACTTCAAGTACAGATGGACCCAAATTCCCTGGAGATAA
AAGTTCAACAACACAAAATAATAATCAGCAGAAAAAAGGGATCCAGGTGTTACCTGATGGTCGG
GTTACTAACATTCCTCAAGGAATGGTGACGGACCAATTTGGAATGATTGGCCTGTTAACATTTA
TCAGGGCAGCAGAGACAGACCCAGGAATGGTACATCTTGCTTTAGGAAGTGACTTAACAACATT
AGGCCTCAATCTGAACTCTCCTGAAAATCTCTACCCCAAATTTGCATCACCCTGGGCATCTTCA
CCTTGTCGACCTCAAGACATAGACTTCCATGTTCCATCTGAGTACTTAACGAACATTCACATTA
GGGATAAGCTGGCTGCAATAAAACTTGGTCGATATGGAGAAGACCTTCTCTTCTATCTCTATTA
CATGAATGGAGGAGACGTATTACAACTTTTAGCTGCAGTAGAGCTTTTTAATCGTGATTGGAGA
TATCACAAAGAAGAACGAGTATGGATTACCAGAGCACCAGGCATGGAACCAACAATGAAAACCA
ATACATATGAGAGGGGAACATATTACTTCTTTGACTGTCTTAACTGGAGGAAAGTAGCTAAGGA
GTTCCATCTGGAATATGATAAATTAGAAGAACGGCCTCATCTGCCATCCACCTTCAACTACAAC
CCTGCTCAACAAGCCTTCTAAAAAGACTTCCCTTTTCTTGGGGTATGGCTGTCTCAGCACAATA
CTCAACATAACTGCAGAACTGATGTGGCTCAGGCACCCTGGTTGTAATTCCTTGAGGATCTGGC
AATTGGCTTACGCAAAGGGTCACCATTTGAGGTCCTGCCTTACTAATTATGTGCTGCCCAACAA
CTAAATTTGTAATTTGTTTTTCTCTAGTTTGAGCAGGGTCTGAATTTTTTCATTTATTTTCATT
TTTGCCAGCAGACAGACTTGGGTCTGTAAAGACAAGCAAGTACACTGACAGAAGTTTACCATTT
AGTTTCTTATATGTAAAAAAGAAAACCCACAAAAGACTCAACAAAATTAGACCACAAAATTTGC
TTTGTTCATTGTAGCACTATTGGTAATAAAATAACAAATGTTTGTGCATTTTTATGTGAAGATC
CTTCTCGTATTTCATTTGGAAAGATGAGCAAGGTCTGCTTCCTTCATTTTACTTCCCCTTCTGT
TTTTGAAAGGCAGTTTCGCCAAGCTTAACGCAAGAATATCTGACTGTTTAAAAGAATGATATTG
CCACAATCTCTGGATGGTCTCCAGGGTTGTGTTATTACTGAGCTTCATCTTTCCAGAATGAGCA
AAACACTGTCCAGTCTTTGTTACGATTTTGTAATAAATGTGTACATTTTTTTTAAATTTTTGGA
CATCACATGAATAAAGGTATGTATGTACGAATGTGTATATATTATATATATGACATCTATTTTG
GAAAATGTTTGCCCTGCTGTACCTCATTTTTAGGAGGTGTGCATGGATGCAATATATGAAAATG
GGACATTCTGGAACTGCTGGTCAGGGGACTTTGTCGCCCTGTGCACTAAAGGGCCAGATTTTCA
GCAGCCAAGGACATCCATACCCAAGTGAATGTGATGGGACTTAAAGAAGTGAACTGAGACAATT
CACTCTGGCTGTTTGAACAGCAGCGTTTCATAGGAAGAGAAAAAAAGATCAATCTTGTATTTTC
TGACCACATAAAGGCTTCTTCTCTTTGTAATAAAGTAGAAAAGCTCTCCTCA

hide sequence

RefSeq Acc Id:

XM_013360126 ⟹ XP_013215580

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404945	46,069,715 - 46,135,923 (-)	NCBI
SpeTri2.0	NW_004936545	7,939,436 - 8,040,409 (+)	NCBI

Sequence:

show sequence

GCAGCCTCCGCGGTGGATACGTCGCCATCTTGGATCCGCGGGACAAGAAAATTCATGCGAGGGA
GAACTGGTGGGCGGTCCTTCCTGTGACACGACCCTTGAGTGACAGTTCTATTTGATTGCCTCCA
GTACTGTGAGGAAAGGACAAGACTCTATGGTGAGGACTGATGGACATACATTATCTGAGAAAAG
AAACTACCAGAAGAATCCCATCGTTTATCATGTTCTGGTTGGACTCCTTTCTTATCGTTTGCTG
GAGTTTGAACTTCAGAGCTATGGTGTCAACCCTGCTGTAATATCTCAGGGGAGCTCCTAGTGTG
GGGCTGGTGCCATGGCTCACCCTCCAACCTTTCCTTCTTCACTTCAGCCTCCAGCTCTGAGCTT
TCCAATCCCCAGAGTAGCAAATGTTGAAAGAAGTTGCACAGGTGACAAACAGCATGTTTGGTGC
TTCAAGAAAGAAGTTTGTAGAGGGGGTCGACAGTGACTACCATGACGAAAACATGTACTACAGC
CAGTCTTCTATGTTCCCACATCGGTCAGAAAAAGATATGCTGGCATCACCATCTACATCAGGTC
AGCTGTCTCAGTTTGGGGCAAGTTTATACGGGCAACAAAGTGCACTAGGCCTTCCAATGAGGGG
AATGAGCAACAATACCCCTCAGTTAAATCGCAGCTTATCACAAGGCACTCAGTTACCGAGCCAC
GTCACGCCAACAACAGGGGTACCAACAATGTCACTTCACACGCCTCCATCTCCAAGCAGGGGTA
TTTTGCCTATGAATCCTAGGAATATGATGAACCACTCCCAGGTTGGTCAGGGCATTGGAATTCC
TAGCAGGACAAATAGCATGAGCAGTTCAGGGTTAGGTAGCCCCAACAGAAGCTCGCCAAGCATA
ATATGTATGCCAAAGCAGCAGCCTTCTCGACAGCCTTTTACTGTGAACAGTATGTCTGGATTTG
GAATGAACAGGAATCAGGCATTTGGAATGAATAACTCCTTATCAAGTAACATTTTTAATGGAAC
AGATGGAAGTGAAAATGTGACAGGATTGGACCTTTCAGATTTTCCAGCATTAGCAGACCGAAAC
AGAAGGGAAGGAAGTGGTAACCCAACTCCATTAATAAACCCCTTGGCTGGAAGAGCTCCATATG
TTGGAATGGTAACAAAACCAGCAAATGAGCAATCCCAGGACTTCTCAATACACAATGAAGATTT
TCCAGCATTACCTGGTTCCAGCTATAAAGATCCAACCTCAAGTAATGATGACAGTAAATCTAAT
TTGAATACATCTGGCAAGCCAACTTCAAGTACAGATGGACCCAAATTCCCTGGAGATAAAAGTT
CAACAACACAAAATAATAATCAGCAGAAAAAAGGGATCCAGGTGTTACCTGATGGTCGGGTTAC
TAACATTCCTCAAGGAATGGTGACGGACCAATTTGGAATGATTGGCCTGTTAACATTTATCAGG
GCAGCAGAGACAGACCCAGGAATGGTACATCTTGCTTTAGGAAGTGACTTAACAACATTAGGCC
TCAATCTGAACTCTCCTGAAAATCTCTACCCCAAATTTGCATCACCCTGGGCATCTTCACCTTG
TCGACCTCAAGACATAGACTTCCATGTTCCATCTGAGTACTTAACGAACATTCACATTAGGGAT
AAGCTGGCTGCAATAAAACTTGGTCGATATGGAGAAGACCTTCTCTTCTATCTCTATTACATGA
ATGGAGGAGACGTATTACAACTTTTAGCTGCAGTAGAGCTTTTTAATCGTGATTGGAGATATCA
CAAAGAAGAACGAGTATGGATTACCAGAGCACCAGGCATGGAACCAACAATGAAAACCAATACA
TATGAGAGGGGAACATATTACTTCTTTGACTGTCTTAACTGGAGGAAAGTAGCTAAGGAGTTCC
ATCTGGAATATGATAAATTAGAAGAACGGCCTCATCTGCCATCCACCTTCAACTACAACCCTGC
TCAACAAGCCTTCTAAAAAGACTTCCCTTTTCTTGGGGTATGGCTGTCTCAGCACAATACTCAA
CATAACTGCAGAACTGATGTGGCTCAGGCACCCTGGTTGTAATTCCTTGAGGATCTGGCAATTG
GCTTACGCAAAGGGTCACCATTTGAGGTCCTGCCTTACTAATTATGTGCTGCCCAACAACTAAA
TTTGTAATTTGTTTTTCTCTAGTTTGAGCAGGGTCTGAATTTTTTCATTTATTTTCATTTTTGC
CAGCAGACAGACTTGGGTCTGTAAAGACAAGCAAGTACACTGACAGAAGTTTACCATTTAGTTT
CTTATATGTAAAAAAGAAAACCCACAAAAGACTCAACAAAATTAGACCACAAAATTTGCTTTGT
TCATTGTAGCACTATTGGTAATAAAATAACAAATGTTTGTGCATTTTTATGTGAAGATCCTTCT
CGTATTTCATTTGGAAAGATGAGCAAGGTCTGCTTCCTTCATTTTACTTCCCCTTCTGTTTTTG
AAAGGCAGTTTCGCCAAGCTTAACGCAAGAATATCTGACTGTTTAAAAGAATGATATTGCCACA
ATCTCTGGATGGTCTCCAGGGTTGTGTTATTACTGAGCTTCATCTTTCCAGAATGAGCAAAACA
CTGTCCAGTCTTTGTTACGATTTTGTAATAAATGTGTACATTTTTTTTAAATTTTTGGACATCA
CATGAATAAAGGTATGTATGTACGAATGTGTATATATTATATATATGACATCTATTTTGGAAAA
TGTTTGCCCTGCTGTACCTCATTTTTAGGAGGTGTGCATGGATGCAATATATGAAAATGGGACA
TTCTGGAACTGCTGGTCAGGGGACTTTGTCGCCCTGTGCACTAAAGGGCCAGATTTTCAGCAGC
CAAGGACATCCATACCCAAGTGAATGTGATGGGACTTAAAGAAGTGAACTGAGACAATTCACTC
TGGCTGTTTGAACAGCAGCGTTTCATAGGAAGAGAAAAAAAGATCAATCTTGTATTTTCTGACC
ACATAAAGGCTTCTTCTCTTTGTAATAAAGTAGAAAAGCTCTCCTCA

hide sequence

RefSeq Acc Id:

XM_013360127 ⟹ XP_013215581

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404945	46,069,715 - 46,135,923 (-)	NCBI
SpeTri2.0	NW_004936545	7,939,436 - 8,040,409 (+)	NCBI

Sequence:

show sequence

GCAGCCTCCGCGGTGGATACGTCGCCATCTTGGATCCGCGGGACAAGAAAATTCATGCGAGGGA
GAACTGGTGGGCGGTCCTTCCTGTGACACGACCCTTGAGTGACAGTTCTATTTGATTGCCTCCA
GTACTGTGAGGAAAGGACAAGACTCTATGGTGAGGACTGATGGACATACATTATCTGAGAAAAG
AAACTACCAGCCTCCAGCTCTGAGCTTTCCAATCCCCAGAGTAGCAAATGTTGAAAGAAGTTGC
ACAGGTGACAAACAGCATGTTTGGTGCTTCAAGAAAGAAGTTTGTAGAGGGGGTCGACAGTGAC
TACCATGACGAAAACATGTACTACAGCCAGTCTTCTATGTTCCCACATCGGTCAGAAAAAGATA
TGCTGGCATCACCATCTACATCAGGTCAGCTGTCTCAGTTTGGGGCAAGTTTATACGGGCAACA
AAGTGCACTAGGCCTTCCAATGAGGGGAATGAGCAACAATACCCCTCAGTTAAATCGCAGCTTA
TCACAAGGCACTCAGTTACCGAGCCACGTCACGCCAACAACAGGGGTACCAACAATGTCACTTC
ACACGCCTCCATCTCCAAGCAGGGGTATTTTGCCTATGAATCCTAGGAATATGATGAACCACTC
CCAGGTTGGTCAGGGCATTGGAATTCCTAGCAGGACAAATAGCATGAGCAGTTCAGGGTTAGGT
AGCCCCAACAGAAGCTCGCCAAGCATAATATGTATGCCAAAGCAGCAGCCTTCTCGACAGCCTT
TTACTGTGAACAGTATGTCTGGATTTGGAATGAACAGGAATCAGGCATTTGGAATGAATAACTC
CTTATCAAGTAACATTTTTAATGGAACAGATGGAAGTGAAAATGTGACAGGATTGGACCTTTCA
GATTTTCCAGCATTAGCAGACCGAAACAGAAGGGAAGGAAGTGGTAACCCAACTCCATTAATAA
ACCCCTTGGCTGGAAGAGCTCCATATGTTGGAATGGTAACAAAACCAGCAAATGAGCAATCCCA
GGACTTCTCAATACACAATGAAGATTTTCCAGCATTACCTGGTTCCAGCTATAAAGATCCAACC
TCAAGTAATGATGACAGTAAATCTAATTTGAATACATCTGGCAAGCCAACTTCAAGTACAGATG
GACCCAAATTCCCTGGAGATAAAAGTTCAACAACACAAAATAATAATCAGCAGAAAAAAGGGAT
CCAGGTGTTACCTGATGGTCGGGTTACTAACATTCCTCAAGGAATGGTGACGGACCAATTTGGA
ATGATTGGCCTGTTAACATTTATCAGGGCAGCAGAGACAGACCCAGGAATGGTACATCTTGCTT
TAGGAAGTGACTTAACAACATTAGGCCTCAATCTGAACTCTCCTGAAAATCTCTACCCCAAATT
TGCATCACCCTGGGCATCTTCACCTTGTCGACCTCAAGACATAGACTTCCATGTTCCATCTGAG
TACTTAACGAACATTCACATTAGGGATAAGCTGGCTGCAATAAAACTTGGTCGATATGGAGAAG
ACCTTCTCTTCTATCTCTATTACATGAATGGAGGAGACGTATTACAACTTTTAGCTGCAGTAGA
GCTTTTTAATCGTGATTGGAGATATCACAAAGAAGAACGAGTATGGATTACCAGAGCACCAGGC
ATGGAACCAACAATGAAAACCAATACATATGAGAGGGGAACATATTACTTCTTTGACTGTCTTA
ACTGGAGGAAAGTAGCTAAGGAGTTCCATCTGGAATATGATAAATTAGAAGAACGGCCTCATCT
GCCATCCACCTTCAACTACAACCCTGCTCAACAAGCCTTCTAAAAAGACTTCCCTTTTCTTGGG
GTATGGCTGTCTCAGCACAATACTCAACATAACTGCAGAACTGATGTGGCTCAGGCACCCTGGT
TGTAATTCCTTGAGGATCTGGCAATTGGCTTACGCAAAGGGTCACCATTTGAGGTCCTGCCTTA
CTAATTATGTGCTGCCCAACAACTAAATTTGTAATTTGTTTTTCTCTAGTTTGAGCAGGGTCTG
AATTTTTTCATTTATTTTCATTTTTGCCAGCAGACAGACTTGGGTCTGTAAAGACAAGCAAGTA
CACTGACAGAAGTTTACCATTTAGTTTCTTATATGTAAAAAAGAAAACCCACAAAAGACTCAAC
AAAATTAGACCACAAAATTTGCTTTGTTCATTGTAGCACTATTGGTAATAAAATAACAAATGTT
TGTGCATTTTTATGTGAAGATCCTTCTCGTATTTCATTTGGAAAGATGAGCAAGGTCTGCTTCC
TTCATTTTACTTCCCCTTCTGTTTTTGAAAGGCAGTTTCGCCAAGCTTAACGCAAGAATATCTG
ACTGTTTAAAAGAATGATATTGCCACAATCTCTGGATGGTCTCCAGGGTTGTGTTATTACTGAG
CTTCATCTTTCCAGAATGAGCAAAACACTGTCCAGTCTTTGTTACGATTTTGTAATAAATGTGT
ACATTTTTTTTAAATTTTTGGACATCACATGAATAAAGGTATGTATGTACGAATGTGTATATAT
TATATATATGACATCTATTTTGGAAAATGTTTGCCCTGCTGTACCTCATTTTTAGGAGGTGTGC
ATGGATGCAATATATGAAAATGGGACATTCTGGAACTGCTGGTCAGGGGACTTTGTCGCCCTGT
GCACTAAAGGGCCAGATTTTCAGCAGCCAAGGACATCCATACCCAAGTGAATGTGATGGGACTT
AAAGAAGTGAACTGAGACAATTCACTCTGGCTGTTTGAACAGCAGCGTTTCATAGGAAGAGAAA
AAAAGATCAATCTTGTATTTTCTGACCACATAAAGGCTTCTTCTCTTTGTAATAAAGTAGAAAA
GCTCTCCTCA

hide sequence

RefSeq Acc Id:

XM_013360130 ⟹ XP_013215584

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404945	46,069,715 - 46,170,754 (-)	NCBI
SpeTri2.0	NW_004936545	7,939,442 - 8,040,409 (+)	NCBI

Sequence:

show sequence

TCCGCGGTGGATACGTCGCCATCTTGGATCCGCGGGACAAGAAAATTCATGCGTACTGTGAGGA
AAGGACAAGACTCTATGGTGAGGACTGATGGACATACATTATCTGAGAAAAGAAACTACCAGGT
GACAAACAGCATGTTTGGTGCTTCAAGAAAGAAGTTTGTAGAGGGGGTCGACAGTGACTACCAT
GACGAAAACATGTACTACAGCCAGTCTTCTATGTTCCCACATCGGTCAGAAAAAGATATGCTGG
CATCACCATCTACATCAGGTCAGCTGTCTCAGTTTGGGGCAAGTTTATACGGGCAACAAAGTGC
ACTAGGCCTTCCAATGAGGGGAATGAGCAACAATACCCCTCAGTTAAATCGCAGCTTATCACAA
GGCACTCAGTTACCGAGCCACGTCACGCCAACAACAGGGGTACCAACAATGTCACTTCACACGC
CTCCATCTCCAAGCAGTATGTCTGGATTTGGAATGAACAGGAATCAGGCATTTGGAATGAATAA
CTCCTTATCAAGTAACATTTTTAATGGAACAGATGGAAGTGAAAATGTGACAGGATTGGACCTT
TCAGATTTTCCAGCATTAGCAGACCGAAACAGAAGGGAAGGAAGTGGTAACCCAACTCCATTAA
TAAACCCCTTGGCTGGAAGAGCTCCATATGTTGGAATGGTAACAAAACCAGCAAATGAGCAATC
CCAGGACTTCTCAATACACAATGAAGATTTTCCAGCATTACCTGGTTCCAGCTATAAAGATCCA
ACCTCAAGTAATGATGACAGTAAATCTAATTTGAATACATCTGGCAAGCCAACTTCAAGTACAG
ATGGACCCAAATTCCCTGGAGATAAAAGTTCAACAACACAAAATAATAATCAGCAGAAAAAAGG
GATCCAGGTGTTACCTGATGGTCGGGTTACTAACATTCCTCAAGGAATGGTGACGGACCAATTT
GGAATGATTGGCCTGTTAACATTTATCAGGGCAGCAGAGACAGACCCAGGAATGGTACATCTTG
CTTTAGGAAGTGACTTAACAACATTAGGCCTCAATCTGAACTCTCCTGAAAATCTCTACCCCAA
ATTTGCATCACCCTGGGCATCTTCACCTTGTCGACCTCAAGACATAGACTTCCATGTTCCATCT
GAGTACTTAACGAACATTCACATTAGGGATAAGCTGGCTGCAATAAAACTTGGTCGATATGGAG
AAGACCTTCTCTTCTATCTCTATTACATGAATGGAGGAGACGTATTACAACTTTTAGCTGCAGT
AGAGCTTTTTAATCGTGATTGGAGATATCACAAAGAAGAACGAGTATGGATTACCAGAGCACCA
GGCATGGAACCAACAATGAAAACCAATACATATGAGAGGGGAACATATTACTTCTTTGACTGTC
TTAACTGGAGGAAAGTAGCTAAGGAGTTCCATCTGGAATATGATAAATTAGAAGAACGGCCTCA
TCTGCCATCCACCTTCAACTACAACCCTGCTCAACAAGCCTTCTAAAAAGACTTCCCTTTTCTT
GGGGTATGGCTGTCTCAGCACAATACTCAACATAACTGCAGAACTGATGTGGCTCAGGCACCCT
GGTTGTAATTCCTTGAGGATCTGGCAATTGGCTTACGCAAAGGGTCACCATTTGAGGTCCTGCC
TTACTAATTATGTGCTGCCCAACAACTAAATTTGTAATTTGTTTTTCTCTAGTTTGAGCAGGGT
CTGAATTTTTTCATTTATTTTCATTTTTGCCAGCAGACAGACTTGGGTCTGTAAAGACAAGCAA
GTACACTGACAGAAGTTTACCATTTAGTTTCTTATATGTAAAAAAGAAAACCCACAAAAGACTC
AACAAAATTAGACCACAAAATTTGCTTTGTTCATTGTAGCACTATTGGTAATAAAATAACAAAT
GTTTGTGCATTTTTATGTGAAGATCCTTCTCGTATTTCATTTGGAAAGATGAGCAAGGTCTGCT
TCCTTCATTTTACTTCCCCTTCTGTTTTTGAAAGGCAGTTTCGCCAAGCTTAACGCAAGAATAT
CTGACTGTTTAAAAGAATGATATTGCCACAATCTCTGGATGGTCTCCAGGGTTGTGTTATTACT
GAGCTTCATCTTTCCAGAATGAGCAAAACACTGTCCAGTCTTTGTTACGATTTTGTAATAAATG
TGTACATTTTTTTTAAATTTTTGGACATCACATGAATAAAGGTATGTATGTACGAATGTGTATA
TATTATATATATGACATCTATTTTGGAAAATGTTTGCCCTGCTGTACCTCATTTTTAGGAGGTG
TGCATGGATGCAATATATGAAAATGGGACATTCTGGAACTGCTGGTCAGGGGACTTTGTCGCCC
TGTGCACTAAAGGGCCAGATTTTCAGCAGCCAAGGACATCCATACCCAAGTGAATGTGATGGGA
CTTAAAGAAGTGAACTGAGACAATTCACTCTGGCTGTTTGAACAGCAGCGTTTCATAGGAAGAG
AAAAAAAGATCAATCTTGTATTTTCTGACCACATAAAGGCTTCTTCTCTTTGTAATAAAGTAGA
AAAGCTCTCCTCA

hide sequence

RefSeq Acc Id:

XM_021728705 ⟹ XP_021584380

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404945	46,069,715 - 46,135,923 (-)	NCBI
SpeTri2.0	NW_004936545	7,939,436 - 8,040,409 (+)	NCBI

Sequence:

show sequence

GCAGCCTCCGCGGTGGATACGTCGCCATCTTGGATCCGCGGGACAAGAAAATTCATGCGAGGGA
GAACTGGTGGGCGGTCCTTCCTGTGACACGACCCTTGAGTGACAGTTCTATTTGATTGCCTCCA
GTACTGTGAGGAAAGGACAAGACTCTATGGTGAGGACTGATGGACATACATTATCTGAGAAAAG
AAACTACCAGAAGAATCCCATCGTTTATCATGTTCTGGTTGGACTCCTTTCTTATCGTTTGCTG
GAGTTTGAACTTCAGAGCTATGGTGTCAACCCTGCTGTAATATCTCAGGGGAGCTCCTAGTGTG
GGGCTGGTGCCATGGCTCACCCTCCAACCTTTCCTTCTTCACTTCAGCCTCCAGCTCTGAGCTT
TCCAATCCCCAGAGTAGCAAATGTTGAAAGAAGTTGCACAGGCCACCGTGTTTTCTTGGATGAG
CCTTCCAGAAATGTATAAAATATTTCTGTAACCCTTGGAGAGGACTCTACCAGGATACTTACCT
ACTCTCCAAAGTGACAAACAGCATGTTTGGTGCTTCAAGAAAGAAGTTTGTAGAGGGGGTCGAC
AGTGACTACCATGACGAAAACATGTACTACAGCCAGTCTTCTATGTTCCCACATCGGTCAGAAA
AAGATATGCTGGCATCACCATCTACATCAGGTCAGCTGTCTCAGTTTGGGGCAAGTTTATACGG
GCAACAAAGTGCACTAGGCCTTCCAATGAGGGGAATGAGCAACAATACCCCTCAGTTAAATCGC
AGCTTATCACAAGGCACTCAGTTACCGAGCCACGTCACGCCAACAACAGGGGTACCAACAATGT
CACTTCACACGCCTCCATCTCCAAGCAGGGGTATTTTGCCTATGAATCCTAGGAATATGATGAA
CCACTCCCAGGTTGGTCAGGGCATTGGAATTCCTAGCAGGACAAATAGCATGAGCAGTTCAGGG
TTAGGTAGCCCCAACAGAAGCTCGCCAAGCATAATATGTATGCCAAAGCAGCAGCCTTCTCGAC
AGCCTTTTACTGTGAACAGTATGTCTGGATTTGGAATGAACAGGAATCAGGCATTTGGAATGAA
TAACTCCTTATCAAGTAACATTTTTAATGGAACAGATGGAAGTGAAAATGTGACAGGATTGGAC
CTTTCAGATTTTCCAGCATTAGCAGACCGAAACAGAAGGGAAGGAAGTGGTAACCCAACTCCAT
TAATAAACCCCTTGGCTGGAAGAGCTCCATATGTTGGAATGGTAACAAAACCAGCAAATGAGCA
ATCCCAGGACTTCTCAATACACAATGAAGATTTTCCAGCATTACCTGGTTCCAGCTATAAAGAT
CCAACCTCAAGTAATGATGACAGTAAATCTAATTTGAATACATCTGGCAAGCCAACTTCAAGTA
CAGATGGACCCAAATTCCCTGGAGATAAAAGTTCAACAACACAAAATAATAATCAGCAGAAAAA
AGGGATCCAGGTGTTACCTGATGGTCGGGTTACTAACATTCCTCAAGGAATGGTGACGGACCAA
TTTGGAATGATTGGCCTGTTAACATTTATCAGGGCAGCAGAGACAGACCCAGGAATGGTACATC
TTGCTTTAGGAAGTGACTTAACAACATTAGGCCTCAATCTGAACTCTCCTGAAAATCTCTACCC
CAAATTTGCATCACCCTGGGCATCTTCACCTTGTCGACCTCAAGACATAGACTTCCATGTTCCA
TCTGAGTACTTAACGAACATTCACATTAGGGATAAGCTGGCTGCAATAAAACTTGGTCGATATG
GAGAAGACCTTCTCTTCTATCTCTATTACATGAATGGAGGAGACGTATTACAACTTTTAGCTGC
AGTAGAGCTTTTTAATCGTGATTGGAGATATCACAAAGAAGAACGAGTATGGATTACCAGAGCA
CCAGGCATGGAACCAACAATGAAAACCAATACATATGAGAGGGGAACATATTACTTCTTTGACT
GTCTTAACTGGAGGAAAGTAGCTAAGGAGTTCCATCTGGAATATGATAAATTAGAAGAACGGCC
TCATCTGCCATCCACCTTCAACTACAACCCTGCTCAACAAGCCTTCTAAAAAGACTTCCCTTTT
CTTGGGGTATGGCTGTCTCAGCACAATACTCAACATAACTGCAGAACTGATGTGGCTCAGGCAC
CCTGGTTGTAATTCCTTGAGGATCTGGCAATTGGCTTACGCAAAGGGTCACCATTTGAGGTCCT
GCCTTACTAATTATGTGCTGCCCAACAACTAAATTTGTAATTTGTTTTTCTCTAGTTTGAGCAG
GGTCTGAATTTTTTCATTTATTTTCATTTTTGCCAGCAGACAGACTTGGGTCTGTAAAGACAAG
CAAGTACACTGACAGAAGTTTACCATTTAGTTTCTTATATGTAAAAAAGAAAACCCACAAAAGA
CTCAACAAAATTAGACCACAAAATTTGCTTTGTTCATTGTAGCACTATTGGTAATAAAATAACA
AATGTTTGTGCATTTTTATGTGAAGATCCTTCTCGTATTTCATTTGGAAAGATGAGCAAGGTCT
GCTTCCTTCATTTTACTTCCCCTTCTGTTTTTGAAAGGCAGTTTCGCCAAGCTTAACGCAAGAA
TATCTGACTGTTTAAAAGAATGATATTGCCACAATCTCTGGATGGTCTCCAGGGTTGTGTTATT
ACTGAGCTTCATCTTTCCAGAATGAGCAAAACACTGTCCAGTCTTTGTTACGATTTTGTAATAA
ATGTGTACATTTTTTTTAAATTTTTGGACATCACATGAATAAAGGTATGTATGTACGAATGTGT
ATATATTATATATATGACATCTATTTTGGAAAATGTTTGCCCTGCTGTACCTCATTTTTAGGAG
GTGTGCATGGATGCAATATATGAAAATGGGACATTCTGGAACTGCTGGTCAGGGGACTTTGTCG
CCCTGTGCACTAAAGGGCCAGATTTTCAGCAGCCAAGGACATCCATACCCAAGTGAATGTGATG
GGACTTAAAGAAGTGAACTGAGACAATTCACTCTGGCTGTTTGAACAGCAGCGTTTCATAGGAA
GAGAAAAAAAGATCAATCTTGTATTTTCTGACCACATAAAGGCTTCTTCTCTTTGTAATAAAGT
AGAAAAGCTCTCCTCA

hide sequence

RefSeq Acc Id:

XM_040280322 ⟹ XP_040136256

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404945	46,069,715 - 46,170,012 (-)	NCBI

RefSeq Acc Id:

XM_040280323 ⟹ XP_040136257

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404945	46,069,715 - 46,135,923 (-)	NCBI

RefSeq Acc Id:

XM_040280324 ⟹ XP_040136258

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404945	46,069,715 - 46,112,680 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_005328797	(Get FASTA)	NCBI Sequence Viewer
	XP_005328798	(Get FASTA)	NCBI Sequence Viewer
	XP_013215579	(Get FASTA)	NCBI Sequence Viewer
	XP_013215580	(Get FASTA)	NCBI Sequence Viewer
	XP_013215581	(Get FASTA)	NCBI Sequence Viewer
	XP_013215584	(Get FASTA)	NCBI Sequence Viewer
	XP_021584380	(Get FASTA)	NCBI Sequence Viewer
	XP_040136256	(Get FASTA)	NCBI Sequence Viewer
	XP_040136257	(Get FASTA)	NCBI Sequence Viewer
	XP_040136258	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000009969.3
	ENSSTOP00000025045.1
	ENSSTOP00000029570.1
GenBank Protein	KAG3291379	(Get FASTA)	NCBI Sequence Viewer
	KAG3291380	(Get FASTA)	NCBI Sequence Viewer
	KAG3291381	(Get FASTA)	NCBI Sequence Viewer
	KAG3291382	(Get FASTA)	NCBI Sequence Viewer
	KAG3291383	(Get FASTA)	NCBI Sequence Viewer
	KAG3291384	(Get FASTA)	NCBI Sequence Viewer
	KAG3291385	(Get FASTA)	NCBI Sequence Viewer
	KAG3291386	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_005328798 ⟸ XM_005328741
- Peptide Label:	isoform X2
- UniProtKB:	A0A287CUN9 (UniProtKB/TrEMBL), I3MGP8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVRTDGHTLSEKRNYQVTNSMFGASRKKFVEGVDSDYHDENMYYSQSSMFPHRSEKDMLASPST SGQLSQFGASLYGQQSALGLPMRGMSNNTPQLNRSLSQGTQLPSHVTPTTGVPTMSLHTPPSPS RGILPMNPRNMMNHSQVGQGIGIPSRTNSMSSSGLGSPNRSSPSIICMPKQQPSRQPFTVNSMS GFGMNRNQAFGMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRNRREGSGNPTPLINPLAGRA PYVGMVTKPANEQSQDFSIHNEDFPALPGSSYKDPTSSNDDSKSNLNTSGKPTSSTDGPKFPGD KSSTTQNNNQQKKGIQVLPDGRVTNIPQGMVTDQFGMIGLLTFIRAAETDPGMVHLALGSDLTT LGLNLNSPENLYPKFASPWASSPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLGRYGEDLLFYLY YMNGGDVLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTMKTNTYERGTYYFFDCLNWRKVAK EFHLEYDKLEERPHLPSTFNYNPAQQAF hide sequence

RefSeq Acc Id:	XP_005328797 ⟸ XM_005328740
- Peptide Label:	isoform X1
- UniProtKB:	I3MGP8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRTVRKGQDSMVRTDGHTLSEKRNYQVTNSMFGASRKKFVEGVDSDYHDENMYYSQSSMFPHRS EKDMLASPSTSGQLSQFGASLYGQQSALGLPMRGMSNNTPQLNRSLSQGTQLPSHVTPTTGVPT MSLHTPPSPSRGILPMNPRNMMNHSQVGQGIGIPSRTNSMSSSGLGSPNRSSPSIICMPKQQPS RQPFTVNSMSGFGMNRNQAFGMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRNRREGSGNPT PLINPLAGRAPYVGMVTKPANEQSQDFSIHNEDFPALPGSSYKDPTSSNDDSKSNLNTSGKPTS STDGPKFPGDKSSTTQNNNQQKKGIQVLPDGRVTNIPQGMVTDQFGMIGLLTFIRAAETDPGMV HLALGSDLTTLGLNLNSPENLYPKFASPWASSPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLGR YGEDLLFYLYYMNGGDVLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTMKTNTYERGTYYFF DCLNWRKVAKEFHLEYDKLEERPHLPSTFNYNPAQQAF hide sequence

RefSeq Acc Id:	XP_013215580 ⟸ XM_013360126
- Peptide Label:	isoform X3
- UniProtKB:	A0A287D7P5 (UniProtKB/TrEMBL), I3MGP8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLKEVAQVTNSMFGASRKKFVEGVDSDYHDENMYYSQSSMFPHRSEKDMLASPSTSGQLSQFGA SLYGQQSALGLPMRGMSNNTPQLNRSLSQGTQLPSHVTPTTGVPTMSLHTPPSPSRGILPMNPR NMMNHSQVGQGIGIPSRTNSMSSSGLGSPNRSSPSIICMPKQQPSRQPFTVNSMSGFGMNRNQA FGMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRNRREGSGNPTPLINPLAGRAPYVGMVTKP ANEQSQDFSIHNEDFPALPGSSYKDPTSSNDDSKSNLNTSGKPTSSTDGPKFPGDKSSTTQNNN QQKKGIQVLPDGRVTNIPQGMVTDQFGMIGLLTFIRAAETDPGMVHLALGSDLTTLGLNLNSPE NLYPKFASPWASSPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLGRYGEDLLFYLYYMNGGDVLQ LLAAVELFNRDWRYHKEERVWITRAPGMEPTMKTNTYERGTYYFFDCLNWRKVAKEFHLEYDKL EERPHLPSTFNYNPAQQAF hide sequence

RefSeq Acc Id:	XP_013215579 ⟸ XM_013360125
- Peptide Label:	isoform X3
- UniProtKB:	A0A287D7P5 (UniProtKB/TrEMBL), I3MGP8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLKEVAQVTNSMFGASRKKFVEGVDSDYHDENMYYSQSSMFPHRSEKDMLASPSTSGQLSQFGA SLYGQQSALGLPMRGMSNNTPQLNRSLSQGTQLPSHVTPTTGVPTMSLHTPPSPSRGILPMNPR NMMNHSQVGQGIGIPSRTNSMSSSGLGSPNRSSPSIICMPKQQPSRQPFTVNSMSGFGMNRNQA FGMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRNRREGSGNPTPLINPLAGRAPYVGMVTKP ANEQSQDFSIHNEDFPALPGSSYKDPTSSNDDSKSNLNTSGKPTSSTDGPKFPGDKSSTTQNNN QQKKGIQVLPDGRVTNIPQGMVTDQFGMIGLLTFIRAAETDPGMVHLALGSDLTTLGLNLNSPE NLYPKFASPWASSPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLGRYGEDLLFYLYYMNGGDVLQ LLAAVELFNRDWRYHKEERVWITRAPGMEPTMKTNTYERGTYYFFDCLNWRKVAKEFHLEYDKL EERPHLPSTFNYNPAQQAF hide sequence

RefSeq Acc Id:	XP_013215581 ⟸ XM_013360127
- Peptide Label:	isoform X3
- UniProtKB:	A0A287D7P5 (UniProtKB/TrEMBL), I3MGP8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLKEVAQVTNSMFGASRKKFVEGVDSDYHDENMYYSQSSMFPHRSEKDMLASPSTSGQLSQFGA SLYGQQSALGLPMRGMSNNTPQLNRSLSQGTQLPSHVTPTTGVPTMSLHTPPSPSRGILPMNPR NMMNHSQVGQGIGIPSRTNSMSSSGLGSPNRSSPSIICMPKQQPSRQPFTVNSMSGFGMNRNQA FGMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRNRREGSGNPTPLINPLAGRAPYVGMVTKP ANEQSQDFSIHNEDFPALPGSSYKDPTSSNDDSKSNLNTSGKPTSSTDGPKFPGDKSSTTQNNN QQKKGIQVLPDGRVTNIPQGMVTDQFGMIGLLTFIRAAETDPGMVHLALGSDLTTLGLNLNSPE NLYPKFASPWASSPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLGRYGEDLLFYLYYMNGGDVLQ LLAAVELFNRDWRYHKEERVWITRAPGMEPTMKTNTYERGTYYFFDCLNWRKVAKEFHLEYDKL EERPHLPSTFNYNPAQQAF hide sequence

RefSeq Acc Id:	XP_013215584 ⟸ XM_013360130
- Peptide Label:	isoform X5
- UniProtKB:	I3MGP8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRTVRKGQDSMVRTDGHTLSEKRNYQVTNSMFGASRKKFVEGVDSDYHDENMYYSQSSMFPHRS EKDMLASPSTSGQLSQFGASLYGQQSALGLPMRGMSNNTPQLNRSLSQGTQLPSHVTPTTGVPT MSLHTPPSPSSMSGFGMNRNQAFGMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRNRREGSG NPTPLINPLAGRAPYVGMVTKPANEQSQDFSIHNEDFPALPGSSYKDPTSSNDDSKSNLNTSGK PTSSTDGPKFPGDKSSTTQNNNQQKKGIQVLPDGRVTNIPQGMVTDQFGMIGLLTFIRAAETDP GMVHLALGSDLTTLGLNLNSPENLYPKFASPWASSPCRPQDIDFHVPSEYLTNIHIRDKLAAIK LGRYGEDLLFYLYYMNGGDVLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTMKTNTYERGTY YFFDCLNWRKVAKEFHLEYDKLEERPHLPSTFNYNPAQQAF hide sequence

RefSeq Acc Id:	XP_021584380 ⟸ XM_021728705
- Peptide Label:	isoform X4
- UniProtKB:	I3MGP8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MFGASRKKFVEGVDSDYHDENMYYSQSSMFPHRSEKDMLASPSTSGQLSQFGASLYGQQSALGL PMRGMSNNTPQLNRSLSQGTQLPSHVTPTTGVPTMSLHTPPSPSRGILPMNPRNMMNHSQVGQG IGIPSRTNSMSSSGLGSPNRSSPSIICMPKQQPSRQPFTVNSMSGFGMNRNQAFGMNNSLSSNI FNGTDGSENVTGLDLSDFPALADRNRREGSGNPTPLINPLAGRAPYVGMVTKPANEQSQDFSIH NEDFPALPGSSYKDPTSSNDDSKSNLNTSGKPTSSTDGPKFPGDKSSTTQNNNQQKKGIQVLPD GRVTNIPQGMVTDQFGMIGLLTFIRAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWA SSPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLGRYGEDLLFYLYYMNGGDVLQLLAAVELFNRD WRYHKEERVWITRAPGMEPTMKTNTYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHLPSTFN YNPAQQAF hide sequence

RefSeq Acc Id:	XP_040136256 ⟸ XM_040280322
- Peptide Label:	isoform X2
- UniProtKB:	A0A287CUN9 (UniProtKB/TrEMBL), I3MGP8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040136257 ⟸ XM_040280323
- Peptide Label:	isoform X4
- UniProtKB:	I3MGP8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040136258 ⟸ XM_040280324
- Peptide Label:	isoform X6

RefSeq Acc Id:

ENSSTOP00000025045 ⟸ ENSSTOT00000042452

RefSeq Acc Id:

ENSSTOP00000009969 ⟸ ENSSTOT00000011114

RefSeq Acc Id:

ENSSTOP00000029570 ⟸ ENSSTOT00000030847

Protein Domains

NOT2/NOT3/NOT5 C-terminal

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000011114	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000011114.3	UniProtKB/TrEMBL
	ENSSTOT00000030847.1	UniProtKB/TrEMBL
	ENSSTOT00000042452.1	UniProtKB/TrEMBL
Gene3D-CATH	2.30.30.1020	UniProtKB/TrEMBL
InterPro	CCR4-NOT_su2/3/5_N_sf	UniProtKB/TrEMBL
	Not2/3/5	UniProtKB/TrEMBL
	NOT2/3/5_C	UniProtKB/TrEMBL
NCBI Gene	Cnot2	ENTREZGENE
PANTHER	CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 2	UniProtKB/TrEMBL
	PTHR23326	UniProtKB/TrEMBL
Pfam	NOT2_3_5	UniProtKB/TrEMBL
UniProt	A0A287CUN9	ENTREZGENE, UniProtKB/TrEMBL
	A0A287D7P5	ENTREZGENE, UniProtKB/TrEMBL
	I3MGP8	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

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