Atp6v0d2 (ATPase, H+ transporting, lysosomal V0 subunit D2) - Rat Genome Database

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Gene: Atp6v0d2 (ATPase, H+ transporting, lysosomal V0 subunit D2) Mus musculus
Analyze
Symbol: Atp6v0d2
Name: ATPase, H+ transporting, lysosomal V0 subunit D2
RGD ID: 1315778
MGI Page MGI
Description: Predicted to enable proton-transporting ATPase activity, rotational mechanism. Predicted to be involved in vacuolar acidification and vacuolar transport. Predicted to act upstream of or within monoatomic ion transport. Located in early endosome. Is expressed in several structures, including alimentary system; genitourinary system; limb; musculoskeletal system; and respiratory system. Orthologous to human ATP6V0D2 (ATPase H+ transporting V0 subunit d2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 1620401A02Rik; AI324824; ATPase, H+ transporting, V0 subunit D, isoform 2; osteoclast-specific vacuolar ATP synthase; V-ATPase; V-ATPase subunit d 2; V-type proton ATPase subunit d 2; vacuolar proton pump subunit d 2; vacuolar proton-translocating ATPase d subunit d2
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39419,876,838 - 19,922,566 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl419,876,841 - 19,922,605 (-)EnsemblGRCm39 Ensembl
GRCm38419,876,838 - 19,922,566 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl419,876,841 - 19,922,605 (-)EnsemblGRCm38mm10GRCm38
MGSCv37419,803,985 - 19,849,713 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36419,803,988 - 19,849,713 (-)NCBIMGSCv36mm8
Celera419,634,311 - 19,678,717 (-)NCBICelera
Cytogenetic Map4A3NCBI
cM Map47.67NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (EXP)
1,1-dichloroethene  (EXP)
1,4-dioxane  (EXP)
1-naphthyl isothiocyanate  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP)
2-aminopurine  (EXP)
3,3',5,5'-tetrabromobisphenol A  (ISO)
3,4-dichloroaniline  (ISO)
acrylamide  (ISO)
aflatoxin B1  (ISO)
Aflatoxin B2 alpha  (ISO)
Aroclor 1254  (EXP)
avobenzone  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[e]pyrene  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
bromobenzene  (ISO)
cadmium atom  (EXP)
cadmium dichloride  (EXP,ISO)
carbon nanotube  (EXP,ISO)
choline  (EXP)
cis-caffeic acid  (ISO)
cisplatin  (ISO)
clothianidin  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
cyclosporin A  (ISO)
desferrioxamine B  (EXP)
dextran sulfate  (EXP)
dimethyl fumarate  (EXP)
dioxygen  (EXP)
diuron  (ISO)
dorsomorphin  (ISO)
endosulfan  (ISO)
fenamidone  (EXP)
folic acid  (EXP)
furan  (EXP,ISO)
GW 4064  (EXP)
indole-3-methanol  (ISO)
L-methionine  (EXP)
lidocaine  (ISO)
lipopolysaccharide  (ISO)
mangiferin  (EXP)
metformin  (ISO)
methapyrilene  (ISO)
methotrexate  (EXP)
methylmercury chloride  (ISO)
N-acetyl-L-cysteine  (EXP,ISO)
N-nitrosodiethylamine  (ISO)
naringin  (EXP)
niclosamide  (ISO)
ozone  (EXP)
panobinostat  (ISO)
perfluorooctane-1-sulfonic acid  (EXP)
permethrin  (EXP)
phenobarbital  (EXP)
pravastatin  (EXP,ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 203580  (EXP)
SB 431542  (ISO)
sclareol  (EXP)
silicon dioxide  (EXP,ISO)
sodium arsenite  (EXP)
sotorasib  (ISO)
styrene  (ISO)
succimer  (EXP)
sulforaphane  (EXP)
tamoxifen  (EXP)
Testosterone propionate  (EXP)
tetrachloroethene  (EXP)
tetrachloromethane  (EXP)
thapsigargin  (ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP,ISO)
trametinib  (ISO)
trans-caffeic acid  (ISO)
tremolite asbestos  (EXP)
trichostatin A  (ISO)
urethane  (ISO)
valproic acid  (ISO)
zaragozic acid A  (EXP,ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
5. Mouse MP Annotation Import Pipeline RGD automated import pipeline
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
8. Diversity of mouse proton-translocating ATPase: presence of multiple isoforms of the C, d and G subunits. Sun-Wada GH, etal., Gene 2003 Jan 2;302(1-2):147-53.
Additional References at PubMed
PMID:9670047   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11498539   PMID:12477932   PMID:12544825   PMID:12963731   PMID:14681479   PMID:15782199   PMID:15800125   PMID:16141072  
PMID:16141073   PMID:16144709   PMID:16717086   PMID:16829211   PMID:17128270   PMID:17885208   PMID:19113919   PMID:19321441   PMID:20127130   PMID:20939024   PMID:21040703   PMID:21873635  
PMID:22806935   PMID:23129004   PMID:23395171   PMID:24362525   PMID:26343857   PMID:26647715   PMID:27085457   PMID:27368196   PMID:28254863   PMID:28395338   PMID:28705898   PMID:28994389  
PMID:30409884   PMID:30431439   PMID:30681394   PMID:31134526   PMID:31199856   PMID:31892731   PMID:32269094   PMID:33860063   PMID:36211967   PMID:36343245   PMID:36689911   PMID:37494443  
PMID:38265287   PMID:38357442   PMID:38422177  


Genomics

Comparative Map Data
Atp6v0d2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39419,876,838 - 19,922,566 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl419,876,841 - 19,922,605 (-)EnsemblGRCm39 Ensembl
GRCm38419,876,838 - 19,922,566 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl419,876,841 - 19,922,605 (-)EnsemblGRCm38mm10GRCm38
MGSCv37419,803,985 - 19,849,713 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36419,803,988 - 19,849,713 (-)NCBIMGSCv36mm8
Celera419,634,311 - 19,678,717 (-)NCBICelera
Cytogenetic Map4A3NCBI
cM Map47.67NCBI
ATP6V0D2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38886,098,910 - 86,154,225 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl885,987,323 - 86,154,225 (+)EnsemblGRCh38hg38GRCh38
GRCh37887,111,139 - 87,166,454 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36887,180,255 - 87,235,570 (+)NCBINCBI36Build 36hg18NCBI36
Build 34887,180,254 - 87,235,570NCBI
Celera883,305,507 - 83,360,717 (+)NCBICelera
Cytogenetic Map8q21.3NCBI
HuRef882,320,757 - 82,376,003 (+)NCBIHuRef
CHM1_1887,152,442 - 87,207,669 (+)NCBICHM1_1
T2T-CHM13v2.0887,216,307 - 87,271,615 (+)NCBIT2T-CHM13v2.0
Atp6v0d2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8538,133,151 - 38,182,245 (-)NCBIGRCr8
mRatBN7.2533,336,257 - 33,385,354 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl533,336,264 - 33,385,354 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx535,456,598 - 35,505,752 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0537,048,803 - 37,097,953 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0536,988,308 - 37,037,462 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0533,843,591 - 33,892,446 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl533,843,519 - 33,892,462 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0538,499,081 - 38,547,691 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4534,476,045 - 34,524,995 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1534,476,226 - 34,525,174 (-)NCBI
Celera532,423,635 - 32,472,662 (-)NCBICelera
Cytogenetic Map5q13NCBI
Atp6v0d2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554173,778,462 - 3,836,672 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554173,778,587 - 3,832,973 (+)NCBIChiLan1.0ChiLan1.0
ATP6V0D2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v27103,507,650 - 103,563,060 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1879,045,991 - 79,101,384 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0882,800,353 - 82,855,741 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1884,771,532 - 84,826,406 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl884,771,427 - 84,826,406 (+)Ensemblpanpan1.1panPan2
ATP6V0D2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12932,336,304 - 32,378,818 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2932,336,467 - 32,378,527 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2932,557,003 - 32,599,242 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02932,491,620 - 32,533,856 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2932,491,605 - 32,533,570 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12932,535,987 - 32,578,019 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02932,560,242 - 32,602,461 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02932,980,580 - 33,022,805 (+)NCBIUU_Cfam_GSD_1.0
Atp6v0d2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530346,973,049 - 47,018,648 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936544774,125 - 819,244 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936544774,154 - 819,189 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ATP6V0D2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl450,694,189 - 50,749,378 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1450,694,188 - 50,749,373 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2455,660,240 - 55,715,444 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ATP6V0D2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1881,280,642 - 81,336,945 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl881,280,888 - 81,337,106 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603959,615,834 - 59,691,705 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Atp6v0d2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247445,617,711 - 5,664,006 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247445,618,144 - 5,663,794 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Atp6v0d2
1966 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:578
Count of miRNA genes:389
Interacting mature miRNAs:455
Transcripts:ENSMUST00000029900, ENSMUST00000128605
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11049579Lmr9b_mleishmaniasis resistance 9b (mouse)4120657234Mouse
11049580Lmr9a_mleishmaniasis resistance 9 (mouse)4120657234Mouse
1301274Lmr9_mleishmaniasis resistance 9 (mouse)Not determined4120657234Mouse
10412079Sm1_msusceptibility to Schistosoma mansoni infection 1 (mouse)Not determined4122955614Mouse
1301510Bbaa13_mB.burgdorferi-associated arthritis 13 (mouse)Not determined4126395649Mouse
11567249Elorr3_methanol induced loss of righting response 3 (mouse)43722677156268235Mouse
1302010Wta1_mweight adult 1 (mouse)Not determined4868324042683429Mouse
1558992Ses8_msalmonella enteritidis susceptibility 8 (mouse)Not determined4868324042683429Mouse
1301473Triglq1_mtriglyceride QTL 1 (mouse)Not determined4868324042683429Mouse
1302125Lxw1_mlupus BXSB x NZW 1 (mouse)Not determined4868324042683429Mouse
4141302Ssrq5_mstress response QTL 5 (mouse)Not determined868324042683430Mouse
10401905Sicd3_mseizure-induced cell death 3 (mouse)Not determined4939552543760862Mouse
10401115Pgia35_mproteoglycan induced arthritis 35 (mouse)Not determined41256237746562509Mouse
12880405Jcdq1_mjoint cartilage degeneration QTL 1 (mouse)41256237746562509Mouse
4142318Lyr2_mlymphoma resistance 2 (mouse)Not determined1401045763283678Mouse
4142047Mvwf3_mmodifier of von Willebrand factor 3 (mouse)Not determined14010457117072206Mouse
1301203Alcp8_malcohol preference locus 8 (mouse)Not determined41739516051395290Mouse
1301237Alcp7_malcohol preference locus 7 (mouse)Not determined41739516051395290Mouse
4141555Nbwa2_mNZB and NZW autoimmunity 2 (mouse)Not determined41789251551892635Mouse
4141911W6q15_mweight 6 weeks QTL 15 (mouse)Not determined1789261688982216Mouse
39128211Lwq22_mliver weight QTL 22 (mouse)41789261688982216Mouse
1357453Kidq4_mkidney weight QTL 4 (mouse)Not determined41789261688982216Mouse
25440481Moaq1_mmodifier of alien QTL 1 (mouse)41950000046000000Mouse

Markers in Region
AI324824  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38419,876,946 - 19,877,069UniSTSGRCm38
MGSCv37419,804,093 - 19,804,216UniSTSGRCm37
Celera419,634,419 - 19,634,542UniSTS
Cytogenetic Map4A3UniSTS
Whitehead/MRC_RH4286.07UniSTS
Atp6v0d2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map4A3UniSTS
cM Map4 UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_175406 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017320194 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB088358 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK075745 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK089507 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK137586 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK170072 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK170405 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK170578 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK170659 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK191007 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL732527 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL773599 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY145896 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY517482 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC087899 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466538 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000029900   ⟹   ENSMUSP00000029900
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl419,876,841 - 19,922,605 (-)Ensembl
GRCm38.p6 Ensembl419,876,841 - 19,922,605 (-)Ensembl
RefSeq Acc Id: ENSMUST00000128605   ⟹   ENSMUSP00000123599
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl419,890,832 - 19,916,940 (-)Ensembl
GRCm38.p6 Ensembl419,890,832 - 19,916,940 (-)Ensembl
RefSeq Acc Id: NM_175406   ⟹   NP_780615
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39419,876,838 - 19,922,566 (-)NCBI
GRCm38419,876,838 - 19,922,566 (-)ENTREZGENE
MGSCv37419,803,985 - 19,849,713 (-)RGD
Celera419,634,311 - 19,678,717 (-)RGD
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_017320194   ⟹   XP_017175683
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39419,876,838 - 19,892,663 (-)NCBI
GRCm38419,876,838 - 19,892,668 (-)NCBI
Sequence:
RefSeq Acc Id: NP_780615   ⟸   NM_175406
- UniProtKB: Q8BTL3 (UniProtKB/Swiss-Prot),   Q5I0V5 (UniProtKB/Swiss-Prot),   Q3TDQ6 (UniProtKB/Swiss-Prot),   Q8BW16 (UniProtKB/Swiss-Prot),   Q80SY3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_017175683   ⟸   XM_017320194
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: ENSMUSP00000029900   ⟸   ENSMUST00000029900
RefSeq Acc Id: ENSMUSP00000123599   ⟸   ENSMUST00000128605

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q80SY3-F1-model_v2 AlphaFold Q80SY3 1-350 view protein structure

Promoters
RGD ID:6834922
Promoter ID:MM_KWN:36809
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lung
Transcripts:OTTMUST00000014512
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36419,849,196 - 19,849,696 (-)MPROMDB
RGD ID:6882904
Promoter ID:EPDNEW_M4903
Type:initiation region
Name:Atp6v0d2_1
Description:Mus musculus ATPase, H+ transporting, lysosomal V0 subunit D2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38419,922,514 - 19,922,574EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1924415 AgrOrtholog
Ensembl Genes ENSMUSG00000028238 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000029900 ENTREZGENE
  ENSMUST00000029900.6 UniProtKB/Swiss-Prot
  ENSMUST00000128605.2 UniProtKB/TrEMBL
Gene3D-CATH 1.10.132.50 UniProtKB/Swiss-Prot
  1.20.1690.10 UniProtKB/Swiss-Prot
InterPro ATPase_su_C-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ATPase_V0-cplx_csu/dsu UniProtKB/Swiss-Prot
  ATPase_V0-cplx_dsu UniProtKB/Swiss-Prot
  V-type_ATPase_su_c/d_dom_3 UniProtKB/Swiss-Prot
  V-type_ATPase_suC UniProtKB/Swiss-Prot
KEGG Report mmu:242341 UniProtKB/Swiss-Prot
MGD MGI:1924415 ENTREZGENE
NCBI Gene 242341 ENTREZGENE
PANTHER PTHR11028 UniProtKB/Swiss-Prot
  V-TYPE PROTON ATPASE SUBUNIT D 2 UniProtKB/Swiss-Prot
Pfam vATP-synt_AC39 UniProtKB/Swiss-Prot
PhenoGen Atp6v0d2 PhenoGen
PIRSF V-ATP_synth_D UniProtKB/Swiss-Prot
Superfamily-SCOP SSF103486 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt B1AWC2_MOUSE UniProtKB/TrEMBL
  Q3TDQ6 ENTREZGENE
  Q5I0V5 ENTREZGENE
  Q80SY3 ENTREZGENE
  Q8BTL3 ENTREZGENE
  Q8BW16 ENTREZGENE
  VA0D2_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary Q3TDQ6 UniProtKB/Swiss-Prot
  Q5I0V5 UniProtKB/Swiss-Prot
  Q8BTL3 UniProtKB/Swiss-Prot
  Q8BW16 UniProtKB/Swiss-Prot