Xpr1 (xenotropic and polytropic retrovirus receptor 1) - Rat Genome Database

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Gene: Xpr1 (xenotropic and polytropic retrovirus receptor 1) Mus musculus
Analyze
Symbol: Xpr1
Name: xenotropic and polytropic retrovirus receptor 1
RGD ID: 1315238
MGI Page MGI
Description: Enables virus receptor activity. Acts upstream of or within response to virus. Predicted to be located in membrane. Predicted to be active in Golgi apparatus and plasma membrane. Is expressed in central nervous system; dorsal root ganglion; lower jaw molar; and neural retina. Human ortholog(s) of this gene implicated in basal ganglia calcification. Orthologous to human XPR1 (xenotropic and polytropic retrovirus receptor 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: phosphate exporter SLC53A1; protein SYG1 homolog; receptor for MCF virus 1; Rmc; Rmc-; Rmc-1; Rmc1; solute carrier family 53 member 1; suppressor of yeast G deletion; susceptibility to xenotropic virus; Sxv; Syg; Syg1; xenotropic and polytropic murine leukemia virus receptor; xenotropic and polytropic retrovirus receptor 1 homolog; XR
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391155,151,403 - 155,293,190 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1155,151,447 - 155,293,161 (-)EnsemblGRCm39 Ensembl
GRCm381155,275,657 - 155,417,444 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1155,275,701 - 155,417,415 (-)EnsemblGRCm38mm10GRCm38
MGSCv371157,122,787 - 157,264,574 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361157,037,875 - 157,179,662 (-)NCBIMGSCv36mm8
Celera1157,707,719 - 157,849,217 (-)NCBICelera
Cytogenetic Map1G3NCBI
cM Map166.49NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IBA)
Golgi apparatus  (IBA)
membrane  (IEA)
plasma membrane  (IBA,ISO)

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. MGD IEA MGD IEA
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. Mouse MP Annotation Import Pipeline RGD automated import pipeline
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:2991590   PMID:6310150   PMID:8551621   PMID:8889548   PMID:9927670   PMID:9988277   PMID:10349636   PMID:10373331   PMID:10516044   PMID:10575084   PMID:10922068   PMID:11042159  
PMID:11076861   PMID:11217851   PMID:12477932   PMID:15033168   PMID:16141072   PMID:16141073   PMID:16354307   PMID:18287559   PMID:20633538   PMID:20844050   PMID:20943975   PMID:21267068  
PMID:21677750   PMID:21873635   PMID:22090134   PMID:23824809   PMID:24374333   PMID:25151060   PMID:26282858   PMID:27799484   PMID:28766044   PMID:28892649   PMID:31498925   PMID:32553155  
PMID:32554809   PMID:32826297   PMID:32932519   PMID:34321999   PMID:34578445   PMID:35112184   PMID:37505935  


Genomics

Comparative Map Data
Xpr1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391155,151,403 - 155,293,190 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1155,151,447 - 155,293,161 (-)EnsemblGRCm39 Ensembl
GRCm381155,275,657 - 155,417,444 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1155,275,701 - 155,417,415 (-)EnsemblGRCm38mm10GRCm38
MGSCv371157,122,787 - 157,264,574 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361157,037,875 - 157,179,662 (-)NCBIMGSCv36mm8
Celera1157,707,719 - 157,849,217 (-)NCBICelera
Cytogenetic Map1G3NCBI
cM Map166.49NCBI
XPR1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381180,632,022 - 180,890,279 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1180,632,022 - 180,890,279 (+)EnsemblGRCh38hg38GRCh38
GRCh371180,601,158 - 180,859,415 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361178,867,796 - 179,122,103 (+)NCBINCBI36Build 36hg18NCBI36
Build 341177,332,829 - 177,587,136NCBI
Celera1153,708,013 - 153,966,433 (+)NCBICelera
Cytogenetic Map1q25.3NCBI
HuRef1151,831,599 - 152,090,309 (+)NCBIHuRef
CHM1_11182,022,943 - 182,282,207 (+)NCBICHM1_1
T2T-CHM13v2.01179,987,035 - 180,245,477 (+)NCBIT2T-CHM13v2.0
Xpr1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81369,991,517 - 70,136,249 (-)NCBIGRCr8
mRatBN7.21367,441,205 - 67,585,950 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1367,446,380 - 67,585,946 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1370,031,420 - 70,170,892 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01371,345,003 - 71,484,322 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01368,606,282 - 68,745,687 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01372,918,552 - 73,056,785 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1372,918,490 - 73,056,875 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01377,853,049 - 77,991,192 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41370,238,356 - 70,379,254 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11370,252,050 - 70,393,440 (-)NCBI
Celera1367,321,277 - 67,459,182 (-)NCBICelera
Cytogenetic Map13q21NCBI
Xpr1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540619,797,245 - 19,974,911 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540619,831,398 - 19,980,994 (+)NCBIChiLan1.0ChiLan1.0
XPR1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2168,880,965 - 69,127,527 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1168,539,233 - 68,785,782 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01156,121,029 - 156,367,565 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11159,789,973 - 160,035,390 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1159,790,170 - 160,029,208 (+)Ensemblpanpan1.1panPan2
XPR1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1714,165,608 - 14,379,822 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl714,165,608 - 14,379,822 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha713,743,229 - 13,957,574 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0713,892,765 - 14,107,009 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl713,892,765 - 14,107,009 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1713,802,993 - 14,017,103 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0713,909,599 - 14,123,996 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0714,033,984 - 14,247,810 (+)NCBIUU_Cfam_GSD_1.0
Xpr1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934490,610,564 - 90,755,079 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364818,462,714 - 8,602,185 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364818,462,714 - 8,601,824 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
XPR1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl9122,237,957 - 122,458,171 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.19122,237,954 - 122,461,669 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.29134,232,141 - 134,329,949 (-)NCBISscrofa10.2Sscrofa10.2susScr3
XPR1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12548,509,854 - 48,756,479 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2548,517,525 - 48,756,458 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605549,895,017 - 50,147,454 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Xpr1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624771942,036 - 1,141,286 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624771941,835 - 1,147,314 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Xpr1
3758 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3469
Count of miRNA genes:874
Interacting mature miRNAs:1213
Transcripts:ENSMUST00000027741, ENSMUST00000111774, ENSMUST00000111775, ENSMUST00000129271, ENSMUST00000139925, ENSMUST00000143529
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13824984Twq5_mtestis weight QTL 5 (mouse)13069992184732197Mouse
11039528Ccc3_mcolitis susceptibility in the Collaborative Cross 3 (mouse)13680142195051546Mouse
1301722Cia9_mcollagen induced arthritis QTL 9 (mouse)Not determined145783900189303617Mouse
4142291Aec2_mautoimmune exocrinopathy 2 (mouse)Not determined52457737182250592Mouse
10412185Hcs9_mhepatocarcinogenesis susceptibility 9 (mouse)Not determined163854690189303617Mouse
26884448Sklq1_mskull length QTL 1, 5 week (mouse)175976637181327565Mouse
27095901Scvln8_msacral vertebrae length 2, 10 week (mouse)194127725172027567Mouse
27226779Tibl1_mtibia length 1, 5 week (mouse)195527725162027569Mouse
10412162Nobq3_mNew Zealand obese QTL 3 (mouse)Not determined1103933405191225397Mouse
1301149Lrnx12_mlearning-contextual 12 (mouse)Not determined1112008822168186402Mouse
1302098Eila1_methanol induced locomotor activity 1 (mouse)Not determined1112008822175468938Mouse
27095915Scvln13_msacral vertebrae length 2, 16 week (mouse)1117527730179827565Mouse
27226767Tibl10_mtibia length 10, 10 week (mouse)1121727729164827569Mouse
27226799Feml5_mfemur length 5, 5 week (mouse)1122027729164827569Mouse
12880408V125Dq3_mvitamin D active form serum level QTL 3 (mouse)1122927738156927738Mouse
27095935Ulnl5_mulna length 5, 10 week (mouse)1128727737181327565Mouse
1301608Emo3_memotionality 3 (mouse)Not determined1129130858163130993Mouse
1302128Ity3_mimmunity to S. typhimurium 3 (mouse)Not determined11131156308165139464Mouse
14746980Manh50_mmandible shape 50 (mouse)1134131564168131564Mouse
1301458Skts8_mskin tumor susceptibility 8 (mouse)Not determined1135794822169795012Mouse
1301408Lore8_mloss of righting induced by ethanol 8 (mouse)Not determined1135877901169878015Mouse
1357434Obsty1_mobesity 1 (mouse)Not determined1136209950170210094Mouse
4141160Cq1_mcholesterol QTL 1 (mouse)Not determined1139452188173452308Mouse
1301523Ccrs1_mcorpus callosum hemisphere surface size 1 (mouse)Not determined1139602037173602216Mouse
1300696Bpq2_mblood pressure QTL 2 (mouse)Not determined1139602037173602216Mouse
1357602Vtbt2_mvertebral trabecular bone trait 2 (mouse)Not determined1139602037173602216Mouse
1301710Bmd5_mbone mineral density 5 (mouse)Not determined1139602037173602216Mouse
11049576Lmr8a_mleishmaniasis resistance 8a (mouse)1139602037173602216Mouse
1301894Skull2_mskull morphology 2 (mouse)Not determined1139602037173602216Mouse
1302193Cpfd1_mcerebellum pattern fissures (mouse)Not determined1139602037173602216Mouse
1300740Tne1_mtotal number errors (mouse)Not determined1139602037173602216Mouse
4142014Wbcq5_mwhite blood cell quantitative locus 5 (mouse)Not determined1141095010175095156Mouse
1301467Pcir1_mperiosteal circumference 1 (mouse)Not determined1141233173175233272Mouse
1301191Stia1_mserum transfer induced arthritis 1 (mouse)Not determined1141233173175233272Mouse
11533913Rd6m1_mretinal degeneration 6 modifier 1 (mouse)1141233173175233272Mouse
4141233Femwf12_mfemur work to failure 12 (mouse)Not determined141233173175233272Mouse
1301151Hdlq14_mHDL QTL 14 (mouse)Not determined1142489543176489734Mouse
1558720Bpq8_mblood pressure QTL 8 (mouse)Not determined1143284665177284803Mouse
11537365Cnes4_mC. neoformans susceptibility locus 4 (mouse)1144449142178449142Mouse
1300571Opfa_mopen field activity (mouse)Not determined1144531347178531592Mouse
12790996Aath2_maortic arch atherosclerosis 2 (mouse)1145077630179077630Mouse
1300934Cfbw1_mcystic fibrosis body weight 1 (mouse)Not determined1145145207179145325Mouse
1301818Ap1q_malcohol preference 1 QTL (mouse)Not determined1146908199167586222Mouse
1301135Pas8_mpulmonary adenoma susceptibility 8 (mouse)Not determined1147125258158233272Mouse
1357567Nidd3k_mNidd3 on KK-A<y> (mouse)Not determined7147125258169038913Mouse
12910522Scgq2_mspontaneous crescentic glomerulonephritis QTL 2 (mouse)1147125258171632257Mouse
1301385Radpf2_mradiation pulmonary fibrosis 2 (mouse)Not determined1147125258182873798Mouse
4141149Hbnr4_mHeligmosomoides bakeri nematode resistance 4 (mouse)Not determined147125258188983224Mouse
12790984Pcho7_mplasma cholesterol 7 (mouse)1147219390181219390Mouse
12791001Aath6_maortic arch atherosclerosis 6 (mouse)1147219390181219390Mouse
1300777Chol10_mcholesterol 10 (mouse)Not determined9147875502181875616Mouse
10043899Hdlq99_mHDL QTL 99 (mouse)Not determined1147875502181875616Mouse
1357618Splq5_mspleen weight QTL 5 (mouse)Not determined1150193673188359312Mouse
1357493Lgaq3_mlate growth adjusted QTL 3 (mouse)Not determined1150193673188359312Mouse
1357485Lgq4_mlate growth QTL 4 (mouse)Not determined1150193673188359312Mouse
12903996Cfq5_mconditioned fear QTL 5 (mouse)1150606337159307464Mouse
4141346Skmw12_mskeletal muscle weight 12 (mouse)Not determined150756737184756922Mouse
1300969Sluc5_msusceptibility to lung cancer 5 (mouse)Not determined1151186243185186402Mouse
4142159Nba2_mNew Zealand Black autoimmunity 2 (mouse)Not determined151835111185835280Mouse
1357889Lprq3_mlipoprotein QTL 3 (mouse)Not determined1152038741186038913Mouse
1301301Sle1_msystemic lupus erythmatosus susceptibility 1 (mouse)Not determined1152038741186038913Mouse
1301025Lbw7_mlupus NZB x NZW 7 (mouse)Not determined1152038741186038913Mouse
1301614Cgnz1_mchronic glomerulonephritis in NZM 1 (mouse)Not determined1152038741186038913Mouse
4141554Cfmq1_mcystic fibrosis modifier QTL 1 (mouse)Not determined1152038741186038913Mouse
13464138Hdlq107_mHDL QTL 107 (mouse)1152132744186132744Mouse
11251722Ewc1_methanol withdrawal and consumption 1 (mouse)1152132744186132744Mouse
10054270Nba10_mNew Zealand Black autoimmunity 10 (mouse)Not determined1152794822186438620Mouse
4142149Ctex_mCtla4 expression QTL (mouse)Not determined1153557406175468938Mouse
10412074Nhdlt1_mnon-HDL cholesterol and triglyceride levels 1 (mouse)Not determined1153675990187676105Mouse
10054490Opefa_mopen field activity (mouse)Not determined1153712853187712853Mouse
10043963Obq25_mobesity QTL 25 (mouse)Not determined1154410512188410512Mouse
12904936Edlmmq1_mextensor digitorum longus muscle mass QTL 1 (mouse)1155002940189002940Mouse
12904944Tammq1_mtibialis anterior muscle mass QTL 1 (mouse)1155002940189002940Mouse
12904957Gmmq1_mgastrocnemius muscle mass QTL 1 (mouse)1155002940189002940Mouse

Markers in Region
D5Mit392.1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map7A3UniSTS
Cytogenetic Map18A1UniSTS
Cytogenetic Map1G3UniSTS
Cytogenetic Map9A3UniSTS
Cytogenetic Map7F1UniSTS
Cytogenetic Map5C1UniSTS
Cytogenetic Map4D2.2UniSTS
Cytogenetic Map16A3UniSTS
Cytogenetic Map11E2UniSTS
Cytogenetic Map16B2UniSTS
Cytogenetic Map6F1UniSTS
Cytogenetic Map4B1UniSTS
Cytogenetic Map17DUniSTS
Cytogenetic Map14C3UniSTS
Cytogenetic Map5C3.3UniSTS
Cytogenetic Map18A2UniSTS
Cytogenetic MapXF5UniSTS
Cytogenetic Map2G3UniSTS
Cytogenetic Map7A2UniSTS
Cytogenetic Map12A1.1UniSTS
Cytogenetic Map1H6UniSTS
Cytogenetic Map7D3UniSTS
Cytogenetic Map1G2UniSTS
Cytogenetic MapXF3UniSTS
Cytogenetic Map4D3UniSTS
Cytogenetic Map2F3UniSTS
Cytogenetic Map2A3UniSTS
Cytogenetic Map4D1UniSTS
Cytogenetic Map15A1UniSTS
Cytogenetic Map1A2UniSTS
Cytogenetic Map13A3.1UniSTS
Cytogenetic Map11B4UniSTS
Cytogenetic Map1D2.3UniSTS
Cytogenetic Map19C1UniSTS
Cytogenetic Map10D3UniSTS
Cytogenetic Map2H2UniSTS
Cytogenetic Map2E1UniSTS
cM Map528.0UniSTS
Whitehead Genetic518.6UniSTS
D1Dcr13  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381155,339,386 - 155,339,486UniSTSGRCm38
MGSCv371157,186,516 - 157,186,616UniSTSGRCm37
Celera1157,771,559 - 157,771,659UniSTS
Cytogenetic Map1G3UniSTS
cM Map1 UniSTS
UniSTS:234242  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381155,279,060 - 155,279,326UniSTSGRCm38
MGSCv371157,126,190 - 157,126,456UniSTSGRCm37
Celera1157,711,122 - 157,711,388UniSTS
Cytogenetic Map1G3UniSTS
cM Map181.6UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_011273 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC110268 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC116712 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF114753 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF131096 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF131098 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF131102 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF198104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK032148 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK033421 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK033610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK043549 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK047436 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK048887 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK050114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK054130 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK082228 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK082643 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK087140 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK141660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK147403 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC017146 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC075721 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC153872 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY122762 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466520 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ022828 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ022840 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ022845 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ022853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ323662 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ323663 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ323664 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ323665 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ323666 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ323667 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ323668 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ323669 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ323670 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ323671 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ323672 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ323673 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ323674 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ323675 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ323676 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ323677 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ323678 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ323679 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ323680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000027741   ⟹   ENSMUSP00000027741
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1155,151,447 - 155,293,075 (-)Ensembl
GRCm38.p6 Ensembl1155,275,701 - 155,417,329 (-)Ensembl
RefSeq Acc Id: ENSMUST00000111774   ⟹   ENSMUSP00000107404
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1155,158,414 - 155,293,161 (-)Ensembl
GRCm38.p6 Ensembl1155,282,668 - 155,417,415 (-)Ensembl
RefSeq Acc Id: ENSMUST00000111775   ⟹   ENSMUSP00000107405
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1155,154,728 - 155,293,153 (-)Ensembl
GRCm38.p6 Ensembl1155,278,982 - 155,417,407 (-)Ensembl
RefSeq Acc Id: ENSMUST00000129271
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1155,198,518 - 155,293,141 (-)Ensembl
GRCm38.p6 Ensembl1155,322,772 - 155,417,395 (-)Ensembl
RefSeq Acc Id: ENSMUST00000139925
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1155,157,929 - 155,185,388 (-)Ensembl
GRCm38.p6 Ensembl1155,282,183 - 155,309,642 (-)Ensembl
RefSeq Acc Id: ENSMUST00000143529
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1155,257,338 - 155,260,408 (-)Ensembl
GRCm38.p6 Ensembl1155,381,592 - 155,384,662 (-)Ensembl
RefSeq Acc Id: ENSMUST00000192359
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1155,165,036 - 155,167,773 (-)Ensembl
GRCm38.p6 Ensembl1155,289,290 - 155,292,027 (-)Ensembl
RefSeq Acc Id: NM_011273   ⟹   NP_035403
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391155,151,403 - 155,293,190 (-)NCBI
GRCm381155,275,657 - 155,417,444 (-)ENTREZGENE
MGSCv371157,122,787 - 157,264,574 (-)RGD
Celera1157,707,719 - 157,849,217 (-)RGD
cM Map1 ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_035403 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAD17206 (Get FASTA)   NCBI Sequence Viewer  
  AAF03482 (Get FASTA)   NCBI Sequence Viewer  
  AAF03484 (Get FASTA)   NCBI Sequence Viewer  
  AAF03488 (Get FASTA)   NCBI Sequence Viewer  
  AAF13256 (Get FASTA)   NCBI Sequence Viewer  
  AAI53873 (Get FASTA)   NCBI Sequence Viewer  
  ADN93334 (Get FASTA)   NCBI Sequence Viewer  
  ADN93335 (Get FASTA)   NCBI Sequence Viewer  
  ADN93349 (Get FASTA)   NCBI Sequence Viewer  
  ADN93354 (Get FASTA)   NCBI Sequence Viewer  
  ADN93362 (Get FASTA)   NCBI Sequence Viewer  
  ADO85653 (Get FASTA)   NCBI Sequence Viewer  
  ADO85654 (Get FASTA)   NCBI Sequence Viewer  
  ADO85655 (Get FASTA)   NCBI Sequence Viewer  
  ADO85657 (Get FASTA)   NCBI Sequence Viewer  
  ADO85658 (Get FASTA)   NCBI Sequence Viewer  
  ADO85659 (Get FASTA)   NCBI Sequence Viewer  
  ADO85660 (Get FASTA)   NCBI Sequence Viewer  
  ADO85661 (Get FASTA)   NCBI Sequence Viewer  
  ADO85662 (Get FASTA)   NCBI Sequence Viewer  
  ADO85663 (Get FASTA)   NCBI Sequence Viewer  
  ADO85664 (Get FASTA)   NCBI Sequence Viewer  
  ADO85665 (Get FASTA)   NCBI Sequence Viewer  
  ADO85666 (Get FASTA)   NCBI Sequence Viewer  
  ADO85667 (Get FASTA)   NCBI Sequence Viewer  
  ADO85668 (Get FASTA)   NCBI Sequence Viewer  
  ADO85669 (Get FASTA)   NCBI Sequence Viewer  
  ADO85670 (Get FASTA)   NCBI Sequence Viewer  
  ADO85671 (Get FASTA)   NCBI Sequence Viewer  
  ADO85672 (Get FASTA)   NCBI Sequence Viewer  
  BAC27724 (Get FASTA)   NCBI Sequence Viewer  
  BAC28279 (Get FASTA)   NCBI Sequence Viewer  
  BAC28389 (Get FASTA)   NCBI Sequence Viewer  
  BAC33059 (Get FASTA)   NCBI Sequence Viewer  
  BAC34074 (Get FASTA)   NCBI Sequence Viewer  
  BAE24789 (Get FASTA)   NCBI Sequence Viewer  
  BAE27891 (Get FASTA)   NCBI Sequence Viewer  
  EDL39365 (Get FASTA)   NCBI Sequence Viewer  
  EDL39405 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000027741
  ENSMUSP00000027741.6
  ENSMUSP00000107404.2
  ENSMUSP00000107405.2
GenBank Protein Q9R031 (Get FASTA)   NCBI Sequence Viewer  
  Q9Z0U0 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_035403   ⟸   NM_011273
- UniProtKB: Q9R034 (UniProtKB/Swiss-Prot),   Q9QZ72 (UniProtKB/Swiss-Prot),   Q8CCT2 (UniProtKB/Swiss-Prot),   Q8CCC8 (UniProtKB/Swiss-Prot),   Q3UR99 (UniProtKB/Swiss-Prot),   Q3UHG6 (UniProtKB/Swiss-Prot),   Q9R036 (UniProtKB/Swiss-Prot),   Q9Z0U0 (UniProtKB/Swiss-Prot),   E3VX20 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000027741   ⟸   ENSMUST00000027741
RefSeq Acc Id: ENSMUSP00000107404   ⟸   ENSMUST00000111774
RefSeq Acc Id: ENSMUSP00000107405   ⟸   ENSMUST00000111775
Protein Domains
EXS   SPX

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9Z0U0-F1-model_v2 AlphaFold Q9Z0U0 1-695 view protein structure

Promoters
RGD ID:6875320
Promoter ID:EPDNEW_M1111
Type:initiation region
Name:Xpr1_1
Description:Mus musculus xenotropic and polytropic retrovirus receptor 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381155,417,403 - 155,417,463EPDNEW
RGD ID:6818720
Promoter ID:MM_KWN:2495
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   Spleen
Transcripts:ENSMUST00000111775,   NM_011273,   OTTMUST00000053874,   UC007DBH.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361157,264,176 - 157,264,676 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:97932 AgrOrtholog
Ensembl Genes ENSMUSG00000026469 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000027741 ENTREZGENE
  ENSMUST00000027741.12 UniProtKB/Swiss-Prot
  ENSMUST00000111774.2 UniProtKB/Swiss-Prot
  ENSMUST00000111775.8 UniProtKB/TrEMBL
InterPro EXS_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SPX_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:19775 UniProtKB/Swiss-Prot
MGD MGI:97932 ENTREZGENE
NCBI Gene 19775 ENTREZGENE
PANTHER XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam EXS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SPX UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Xpr1 PhenoGen
PROSITE EXS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SPX UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt D3Z2B4_MOUSE UniProtKB/TrEMBL
  E2J868_MOUSE UniProtKB/TrEMBL
  E3VX02_MOUSE UniProtKB/TrEMBL
  E3VX03_MOUSE UniProtKB/TrEMBL
  E3VX04_MOUSE UniProtKB/TrEMBL
  E3VX05_MOUSE UniProtKB/TrEMBL
  E3VX06_MOUSE UniProtKB/TrEMBL
  E3VX07_MOUSE UniProtKB/TrEMBL
  E3VX08_MOUSE UniProtKB/TrEMBL
  E3VX09_MOUSE UniProtKB/TrEMBL
  E3VX10_MOUSE UniProtKB/TrEMBL
  E3VX11_MOUSE UniProtKB/TrEMBL
  E3VX14_MOUSE UniProtKB/TrEMBL
  E3VX15_MOUSE UniProtKB/TrEMBL
  E3VX16_MOUSE UniProtKB/TrEMBL
  E3VX17_MOUSE UniProtKB/TrEMBL
  E3VX18_MOUSE UniProtKB/TrEMBL
  E3VX19_MOUSE UniProtKB/TrEMBL
  E3VX20 ENTREZGENE, UniProtKB/TrEMBL
  Q3UHG6 ENTREZGENE
  Q3UR99 ENTREZGENE
  Q8BHF9_MOUSE UniProtKB/TrEMBL
  Q8CCC8 ENTREZGENE
  Q8CCT2 ENTREZGENE
  Q9QZ72 ENTREZGENE
  Q9R031 ENTREZGENE
  Q9R034 ENTREZGENE
  Q9R036 ENTREZGENE
  Q9Z0U0 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q3UHG6 UniProtKB/Swiss-Prot
  Q3UR99 UniProtKB/Swiss-Prot
  Q8CCC8 UniProtKB/Swiss-Prot
  Q8CCT2 UniProtKB/Swiss-Prot
  Q9QZ72 UniProtKB/Swiss-Prot
  Q9R034 UniProtKB/Swiss-Prot
  Q9R036 UniProtKB/Swiss-Prot