Eif4g2 (eukaryotic translation initiation factor 4, gamma 2) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Eif4g2 (eukaryotic translation initiation factor 4, gamma 2) Mus musculus
Analyze
Symbol: Eif4g2
Name: eukaryotic translation initiation factor 4, gamma 2
RGD ID: 1313239
MGI Page MGI
Description: Enables translation initiation factor activity. Involved in regulation of translational initiation. Located in cytoplasm. Is active in postsynaptic density. Is expressed in several structures, including cerebral cortex; genitourinary system; liver; lung; and spleen. Orthologous to human EIF4G2 (eukaryotic translation initiation factor 4 gamma 2).
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: AA589388; apobec-1 target 1; DAP; DAP-5; E130105L11Rik; eIF-4-gamma 2; eIF-4G 2; eIF4G 2; eukaryotic translation initiation factor 4 gamma 2; Na; Nat; Nat1; Natm1; novel APOBEC-1 target 1; p97; translation repressor Nat1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Gm19062  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397110,667,192 - 110,682,237 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7110,666,957 - 110,682,237 (-)EnsemblGRCm39 Ensembl
GRCm387111,067,985 - 111,083,030 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7111,067,750 - 111,083,030 (-)EnsemblGRCm38mm10GRCm38
MGSCv377118,211,499 - 118,226,544 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367110,863,113 - 110,874,211 (-)NCBIMGSCv36mm8
Celera7111,045,469 - 111,060,514 (-)NCBICelera
Cytogenetic Map7E3NCBI
cM Map758.0NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (EXP)
(S)-amphetamine  (ISO)
1,2-dimethylhydrazine  (EXP)
17beta-estradiol  (EXP)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4,6-tribromophenol  (ISO)
2,6-dinitrotoluene  (ISO)
2-methylcholine  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
3,4-Methylenedioxyamphetamine  (ISO)
3,4-methylenedioxymethamphetamine  (EXP,ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
3H-1,2-dithiole-3-thione  (ISO)
4,4'-diaminodiphenylmethane  (EXP)
6-propyl-2-thiouracil  (ISO)
7,12-dimethyltetraphene  (EXP)
acrolein  (ISO)
all-trans-retinoic acid  (ISO)
alpha-pinene  (ISO)
amitrole  (ISO)
arsenous acid  (ISO)
atrazine  (ISO)
belinostat  (ISO)
benzene  (ISO)
benzo[a]pyrene  (EXP)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
cadmium dichloride  (EXP)
calcitriol  (ISO)
CGP 52608  (ISO)
cisplatin  (ISO)
cobalt dichloride  (ISO)
copper atom  (EXP)
copper(0)  (EXP)
cyproconazole  (EXP)
dexamethasone  (ISO)
diarsenic trioxide  (ISO)
dibenzo[a,l]pyrene  (EXP)
diethylstilbestrol  (ISO)
dimethyl sulfoxide  (ISO)
disodium selenite  (ISO)
doxorubicin  (ISO)
epoxiconazole  (EXP)
ethanol  (EXP)
folic acid  (EXP)
FR900359  (ISO)
gentamycin  (ISO)
hydrogen peroxide  (ISO)
indometacin  (ISO)
ivermectin  (ISO)
lead diacetate  (EXP)
LY294002  (ISO)
maneb  (EXP)
melatonin  (EXP)
menadione  (ISO)
methamphetamine  (ISO)
methimazole  (ISO)
methylseleninic acid  (ISO)
ozone  (ISO)
p-menthan-3-ol  (ISO)
paraquat  (EXP)
pentachlorophenol  (EXP)
perfluorooctane-1-sulfonic acid  (EXP,ISO)
phorbol 13-acetate 12-myristate  (ISO)
propiconazole  (EXP)
resveratrol  (ISO)
rimonabant  (EXP)
sirolimus  (ISO)
sodium arsenite  (ISO)
sulfadimethoxine  (ISO)
thioacetamide  (ISO)
titanium dioxide  (ISO)
trichostatin A  (ISO)
triptonide  (EXP)
valproic acid  (EXP,ISO)
vinclozolin  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. The mechanism of eukaryotic translation initiation: new insights and challenges. Hinnebusch AG and Lorsch JR, Cold Spring Harb Perspect Biol. 2012 Oct 1;4(10). pii: a011544. doi: 10.1101/cshperspect.a011544.
2. The scanning mechanism of eukaryotic translation initiation. Hinnebusch AG Annu Rev Biochem. 2014;83:779-812. doi: 10.1146/annurev-biochem-060713-035802. Epub 2014 Jan 29.
3. Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome. Ko MS, etal., Hum Mol Genet 1998 Nov;7(12):1967-78.
4. MGDs mouse GO annotations MGD data from the GO Consortium
5. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
6. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
7. Low expression of the apolipoprotein B mRNA-editing transgene in mice reduces LDL levels but does not cause liver dysplasia or tumors. Qian X, etal., Arterioscler Thromb Vasc Biol. 1998 Jun;18(6):1013-20.
8. Mouse MP Annotation Import Pipeline RGD automated import pipeline
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
10. Expression of the translational repressor NAT1 in experimental models of cardiac hypertrophy. Sangaralingham SJ, etal., Mol Cell Biochem. 2003 Mar;245(1-2):183-90.
Additional References at PubMed
PMID:9027506   PMID:9030685   PMID:9049310   PMID:9916995   PMID:10022874   PMID:10321731   PMID:10349636   PMID:10725249   PMID:10922068   PMID:11032820   PMID:11042159   PMID:11076861  
PMID:11217851   PMID:11544199   PMID:12388085   PMID:12477932   PMID:12482958   PMID:12520002   PMID:12787504   PMID:12904583   PMID:14610273   PMID:14691545   PMID:15102471   PMID:15489334  
PMID:15782199   PMID:16141072   PMID:16141073   PMID:16602821   PMID:18799693   PMID:19114715   PMID:19158098   PMID:20843830   PMID:21267068   PMID:21454508   PMID:21677750   PMID:21689717  
PMID:21873635   PMID:24194600   PMID:24700326   PMID:25211037   PMID:25422881   PMID:25737280   PMID:27626380   PMID:30196744   PMID:30333137   PMID:30718468   PMID:31097699   PMID:31138677  
PMID:32325033   PMID:32554809   PMID:33303185   PMID:34321999   PMID:36417873   PMID:37307456   PMID:37646610   PMID:38355793  


Genomics

Comparative Map Data
Eif4g2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397110,667,192 - 110,682,237 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7110,666,957 - 110,682,237 (-)EnsemblGRCm39 Ensembl
GRCm387111,067,985 - 111,083,030 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7111,067,750 - 111,083,030 (-)EnsemblGRCm38mm10GRCm38
MGSCv377118,211,499 - 118,226,544 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367110,863,113 - 110,874,211 (-)NCBIMGSCv36mm8
Celera7111,045,469 - 111,060,514 (-)NCBICelera
Cytogenetic Map7E3NCBI
cM Map758.0NCBI
EIF4G2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381110,797,046 - 10,808,926 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1110,797,050 - 10,808,940 (-)EnsemblGRCh38hg38GRCh38
GRCh371110,818,593 - 10,830,473 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361110,775,169 - 10,787,158 (-)NCBINCBI36Build 36hg18NCBI36
Build 341110,775,177 - 10,787,047NCBI
Celera1110,940,190 - 10,952,258 (-)NCBICelera
Cytogenetic Map11p15.4NCBI
HuRef1110,491,522 - 10,503,590 (-)NCBIHuRef
CHM1_11110,817,553 - 10,829,619 (-)NCBICHM1_1
T2T-CHM13v2.01110,881,950 - 10,893,905 (-)NCBIT2T-CHM13v2.0
Eif4g2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81174,616,102 - 174,628,252 (-)NCBIGRCr8
mRatBN7.21165,181,433 - 165,193,583 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1165,181,434 - 165,193,588 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1173,518,769 - 173,530,901 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01180,704,798 - 180,716,930 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01173,389,068 - 173,401,193 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01175,883,362 - 175,895,510 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1175,883,363 - 175,895,510 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01182,868,164 - 182,880,312 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41168,829,099 - 168,841,605 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11168,941,728 - 168,951,577 (-)NCBI
Celera1163,069,815 - 163,081,949 (-)NCBICelera
Cytogenetic Map1q33NCBI
Eif4g2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541426,389,125 - 26,399,916 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541426,389,125 - 26,399,916 (-)NCBIChiLan1.0ChiLan1.0
EIF4G2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2913,238,742 - 13,250,500 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11113,201,119 - 13,212,706 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01110,961,216 - 10,973,210 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11110,656,795 - 10,668,956 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1110,656,795 - 10,668,956 (-)Ensemblpanpan1.1panPan2
EIF4G2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12133,967,908 - 33,980,017 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2133,952,793 - 33,977,653 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2133,532,612 - 33,544,671 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02134,844,758 - 34,856,829 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2134,801,406 - 34,855,914 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12134,105,027 - 34,117,074 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02134,276,580 - 34,288,606 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02134,568,057 - 34,580,113 (-)NCBIUU_Cfam_GSD_1.0
Eif4g2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494751,529,803 - 51,540,635 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365287,565,586 - 7,574,594 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365287,563,965 - 7,574,630 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EIF4G2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl248,666,520 - 48,678,950 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1248,666,590 - 48,678,656 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2252,012,917 - 52,025,272 (+)NCBISscrofa10.2Sscrofa10.2susScr3
EIF4G2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1154,017,587 - 54,029,491 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl154,017,696 - 54,028,843 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666038151,670,660 - 151,682,466 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Eif4g2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247662,866,799 - 2,878,384 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Eif4g2
540 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3762
Count of miRNA genes:904
Interacting mature miRNAs:1250
Transcripts:ENSMUST00000106666, ENSMUST00000159305, ENSMUST00000159465, ENSMUST00000160132, ENSMUST00000160552, ENSMUST00000160966, ENSMUST00000161051, ENSMUST00000161079, ENSMUST00000161158, ENSMUST00000161682, ENSMUST00000161736, ENSMUST00000161790, ENSMUST00000162394, ENSMUST00000162415, ENSMUST00000163014
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
12792978Fbmd3_mfemoral bone mineral density 3, females only (mouse)77050288142367832Mouse
10412199Sst2_msusceptibility to tuberculosis 2 (mouse)Not determined718728794119485380Mouse
1301158Eae4_msusceptibility to experimental allergic encephalomyelitis 4 (mouse)Not determined719147398141919804Mouse
1301082Bbaa16_mB.burgdorferi-associated arthritis 16 (mouse)Not determined736280015116416877Mouse
10043926Bw1n_mbody weight 1 in NSY (mouse)Not determined745161966118693530Mouse
13208555Lgth10_mbody length 10 (mouse)751649748125599172Mouse
27226751Femd5_mfemur midshaft diameter 5, 10 week (mouse)753249748143153737Mouse
25823170Hrsq7_mhost response to SARS QTL 7, log titer (mouse)754819589116822815Mouse
27226778Femd11_mfemur midshaft diameter 11, 16 week (mouse)756949748134001729Mouse
26884408Bzwq13_mbi-zygomatic width QTL 13, 16 week (mouse)761749748121399223Mouse
27095916Scvln15_msacral vertebrae length 2, 16 week (mouse)761749748123699223Mouse
26884440Sklq4_mskull length QTL 4, 5 week (mouse)765249748126499172Mouse
27226715Metcl3_mmetatarsal-calcaneal length 3, 5 week (mouse)767849748119499223Mouse
26884444Sklq8_mskull length QTL 8, 10 week (mouse)767849748124199223Mouse
26884451Sklq14_mskull length QTL 14, 16 week (mouse)767849748124999172Mouse
27095907Scvln4_msacral vertebrae length 2, 5 week (mouse)769949748120499223Mouse
27095910Pglq13_mpelvic girdle length QTL 13, 16 week (mouse)773049748125699172Mouse
27095933Ulnl3_mulna length 3, 5 week (mouse)773149748143153737Mouse
27226745Metcl9_mmetatarsal-calcaneal length 9, 10 week (mouse)774849748122199223Mouse
27226781Tibl3_mtibia length 3, 5 week (mouse)774849748122199223Mouse
26884398Humsd6_mhumerus midshaft diameter 6, 16 week (mouse)778649748136901729Mouse
10412110Cctq1_mcentral corneal thickness QTL 1 (mouse)Not determined780551681114551791Mouse
4142500Morq1_mmodifier of Rs1 QTL 1 (mouse)Not determined80551681114551791Mouse
27095930Ulnl10_mulna length 10, 16 week (mouse)780849748126699172Mouse
27095923Pglq3_mpelvic girdle length QTL 3, 5 week (mouse)781249748124199223Mouse
27095903Scvln10_msacral vertebrae length 2, 10 week (mouse)781449748126499172Mouse
27226765Tibl18_mtibia length 18, 16 week (mouse)781849748126499172Mouse
27226763Feml20_mfemur length 20, 16 week (mouse)785049208124199223Mouse
1301997Cia7_mcollagen induced arthritis QTL 7 (mouse)Not determined785365595112533819Mouse
1301647Elpt_melevated leptin (mouse)Not determined786500186120500329Mouse
1301188Heal6_mwound healing/regeneration 6 (mouse)Not determined787043932121044066Mouse
1302062Stheal6_msoft tissue heal 6 (mouse)Not determined787043932121044066Mouse
13463473Hbbcq4_mhemoglobin concentration QTL 4 (mouse)787043932121044066Mouse
1301781Capsq3_mcapsaicin sensitivity related QTL 3 (mouse)Not determined787143137119485380Mouse
27226769Tibl12_mtibia length 12, 10 week (mouse)787249208126499172Mouse
27226790Feml15_mfemur length 15, 10 week (mouse)787249208126499172Mouse
1357664Nba3_mNew Zealand Black autoimmunity 3 (mouse)Not determined791482996125483156Mouse
1301937Skull10_mskull morphology 10 (mouse)Not determined791482996125483156Mouse
1300528Ssial3_msusceptibility to sialadenitis 3 (mouse)Not determined793391848127392041Mouse
1301478Eae26_msusceptibility to experimental allergic encephalomyelitis 26 (mouse)Not determined798164922132165010Mouse
13524850Asrq7_macoustic startle response 7 (mouse)798394974132394974Mouse
10412104Tons2_mtongue size 2 (mouse)Not determined799837716133837716Mouse
11039524Tbbr3_mTrypanosoma brucei brucei response 3 (mouse)7100750722134750843Mouse
1301447Fembm3_mfemoral bone morphometry 3 (mouse)Not determined7100993261134993342Mouse
1357460Vtbt4_mvertebral trabecular bone trait 4 (mouse)Not determined7101693381135693530Mouse
1301105Cfld4_mcystic fibrosis lung disease 4 (mouse)Not determined7101693381135693530Mouse
1300721Cfbw3_mcystic fibrosis body weight 3 (mouse)Not determined7101693381135693530Mouse
4142312Nilac4_mnicotine induced locomotor activity 4 (mouse)Not determined7102485219136485380Mouse
5491192Mobq1_mmultigenic obesity QTL 1 (mouse)Not determined7105250663139250811Mouse
13524852Asrq7a_macoustic startle response 7a (mouse)7105350008139350008Mouse
13524524Bodwtq6_mbody wweight QTL 6 (mouse)7107245693113055693Mouse
4141056Lskcn2_mLSK cell number 2 (mouse)Not determined108482996118693530Mouse
35673311Ari6_mantibody response to influenza 6, day 15, IgG2b (mouse)7108699207115099235Mouse
25394557Skmw64_mskeletal muscle weight 64, soleus (mouse)7108715780114592736Mouse
14700684Civq1_mcerebral infarct volume QTL 1 (mouse)7109707335143707335Mouse
14700687Civq5_mcerebral infarct volume QTL 5 (mouse)7109707335143707335Mouse
14700688Civq6_mcerebral infarct volume QTL 6 (mouse)7109707335143707335Mouse

Markers in Region
Eif4g2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm387111,080,231 - 111,081,571UniSTSGRCm38
MGSCv377118,223,745 - 118,225,085UniSTSGRCm37
Celera7111,057,715 - 111,059,055UniSTS
Cytogenetic Map7F1UniSTS
cM Map751.52UniSTS
RH124947  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm387111,070,958 - 111,071,262UniSTSGRCm38
MGSCv377118,214,472 - 118,214,776UniSTSGRCm37
Celera7111,048,442 - 111,048,746UniSTS
Cytogenetic Map7F1UniSTS
cM Map751.52UniSTS
PMC314019P1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm387111,081,548 - 111,081,722UniSTSGRCm38
MGSCv377118,225,062 - 118,225,236UniSTSGRCm37
Celera7111,059,032 - 111,059,206UniSTS
Cytogenetic Map7F1UniSTS
cM Map751.52UniSTS
D11S3958  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm387111,071,936 - 111,072,114UniSTSGRCm38
MGSCv377118,215,450 - 118,215,628UniSTSGRCm37
Celera7111,049,420 - 111,049,598UniSTS
Cytogenetic Map7F1UniSTS
cM Map751.52UniSTS
MARC_8853-8854:992364778:1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm387111,074,808 - 111,075,621UniSTSGRCm38
MGSCv377118,218,322 - 118,219,135UniSTSGRCm37
Celera7111,052,292 - 111,053,105UniSTS
Cytogenetic Map7F1UniSTS
cM Map751.52UniSTS
MARC_8851-8852:992359168:1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm387111,075,601 - 111,077,029UniSTSGRCm38
MGSCv377118,219,115 - 118,220,543UniSTSGRCm37
Celera7111,053,085 - 111,054,513UniSTS
Cytogenetic Map7F1UniSTS
cM Map751.52UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001040131 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_013507 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC150312 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC159206 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI874618 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK021370 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK037763 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK141512 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK144309 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK150745 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK151637 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK153701 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK195045 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC010654 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC039274 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC040391 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC043034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC056387 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC057673 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC064810 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC092521 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC127064 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU610672 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB247560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF172280 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466531 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CK619644 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN700661 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CV557098 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U63323 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U76112 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000159305   ⟹   ENSMUSP00000125098
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7110,678,545 - 110,681,402 (-)Ensembl
GRCm38.p6 Ensembl7111,079,338 - 111,082,195 (-)Ensembl
RefSeq Acc Id: ENSMUST00000159465
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7110,673,345 - 110,673,906 (-)Ensembl
GRCm38.p6 Ensembl7111,074,138 - 111,074,699 (-)Ensembl
RefSeq Acc Id: ENSMUST00000160132   ⟹   ENSMUSP00000124914
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7110,677,629 - 110,682,226 (-)Ensembl
GRCm38.p6 Ensembl7111,078,422 - 111,083,019 (-)Ensembl
RefSeq Acc Id: ENSMUST00000160552
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7110,674,080 - 110,674,592 (-)Ensembl
GRCm38.p6 Ensembl7111,074,873 - 111,075,385 (-)Ensembl
RefSeq Acc Id: ENSMUST00000160966   ⟹   ENSMUSP00000125301
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7110,680,124 - 110,681,060 (-)Ensembl
GRCm38.p6 Ensembl7111,080,917 - 111,081,853 (-)Ensembl
RefSeq Acc Id: ENSMUST00000161051   ⟹   ENSMUSP00000125375
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7110,671,139 - 110,682,224 (-)Ensembl
GRCm38.p6 Ensembl7111,071,932 - 111,083,017 (-)Ensembl
RefSeq Acc Id: ENSMUST00000161079
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7110,671,576 - 110,672,358 (-)Ensembl
GRCm38.p6 Ensembl7111,072,369 - 111,073,151 (-)Ensembl
RefSeq Acc Id: ENSMUST00000161158
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7110,671,799 - 110,673,468 (-)Ensembl
GRCm38.p6 Ensembl7111,072,592 - 111,074,261 (-)Ensembl
RefSeq Acc Id: ENSMUST00000161682
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7110,677,157 - 110,678,571 (-)Ensembl
GRCm38.p6 Ensembl7111,077,950 - 111,079,364 (-)Ensembl
RefSeq Acc Id: ENSMUST00000161736
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7110,675,730 - 110,676,958 (-)Ensembl
GRCm38.p6 Ensembl7111,076,523 - 111,077,751 (-)Ensembl
RefSeq Acc Id: ENSMUST00000161790
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7110,674,419 - 110,675,416 (-)Ensembl
GRCm38.p6 Ensembl7111,075,212 - 111,076,209 (-)Ensembl
RefSeq Acc Id: ENSMUST00000162394
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7110,679,626 - 110,682,034 (-)Ensembl
GRCm38.p6 Ensembl7111,080,419 - 111,082,827 (-)Ensembl
RefSeq Acc Id: ENSMUST00000162415   ⟹   ENSMUSP00000124551
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7110,666,957 - 110,682,237 (-)Ensembl
GRCm38.p6 Ensembl7111,067,750 - 111,083,030 (-)Ensembl
RefSeq Acc Id: ENSMUST00000163014   ⟹   ENSMUSP00000123811
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7110,672,607 - 110,673,456 (-)Ensembl
GRCm38.p6 Ensembl7111,073,400 - 111,074,249 (-)Ensembl
RefSeq Acc Id: NM_001040131   ⟹   NP_001035221
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397110,667,192 - 110,682,237 (-)NCBI
GRCm387111,067,985 - 111,083,030 (-)ENTREZGENE
MGSCv377118,211,499 - 118,226,544 (-)RGD
Celera7111,045,469 - 111,060,514 (-)RGD
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_013507   ⟹   NP_038535
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397110,667,192 - 110,682,237 (-)NCBI
GRCm387111,067,985 - 111,083,030 (-)ENTREZGENE
MGSCv377118,211,499 - 118,226,544 (-)RGD
Celera7111,045,469 - 111,060,514 (-)RGD
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_038535   ⟸   NM_013507
- Peptide Label: isoform 1
- UniProtKB: Q921U3 (UniProtKB/Swiss-Prot),   Q6P1Z0 (UniProtKB/Swiss-Prot),   Q5XKD8 (UniProtKB/Swiss-Prot),   Q3UNC1 (UniProtKB/Swiss-Prot),   Q0VGZ3 (UniProtKB/Swiss-Prot),   P97867 (UniProtKB/Swiss-Prot),   Q62448 (UniProtKB/Swiss-Prot),   A0JNY7 (UniProtKB/TrEMBL),   G3XA17 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001035221   ⟸   NM_001040131
- Peptide Label: isoform 2
- UniProtKB: F7CBP1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000125098   ⟸   ENSMUST00000159305
RefSeq Acc Id: ENSMUSP00000123811   ⟸   ENSMUST00000163014
RefSeq Acc Id: ENSMUSP00000124914   ⟸   ENSMUST00000160132
RefSeq Acc Id: ENSMUSP00000125301   ⟸   ENSMUST00000160966
RefSeq Acc Id: ENSMUSP00000124551   ⟸   ENSMUST00000162415
RefSeq Acc Id: ENSMUSP00000125375   ⟸   ENSMUST00000161051
Protein Domains
MI   MIF4G   W2

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q62448-F1-model_v2 AlphaFold Q62448 1-906 view protein structure

Promoters
RGD ID:8665243
Promoter ID:EPDNEW_M10653
Type:initiation region
Name:Eif4g2_1
Description:Mus musculus eukaryotic translation initiation factor 4, gamma2 , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm387111,083,006 - 111,083,066EPDNEW
RGD ID:6848126
Promoter ID:MM_ACW:45755
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:EIF4G2.JSEP07,   EIF4G2.NSEP07-UNSPLICED,   EIF4G2.OSEP07,   EIF4G2.QSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv367118,217,416 - 118,218,802 (-)MPROMDB
RGD ID:6848124
Promoter ID:MM_ACW:45757
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_4Hour,   Brain,   Liver,   MEF_B4
Transcripts:EIF4G2.ISEP07,   EIF4G2.KSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv367118,219,966 - 118,220,622 (-)MPROMDB
RGD ID:6848855
Promoter ID:MM_TRO:9128
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   MEF_B6
Transcripts:MTR001269.7.2965.5
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv367118,223,531 - 118,224,757 (-)MPROMDB
RGD ID:6848854
Promoter ID:MM_TRO:9129
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   MEF_B6
Transcripts:MTR001269.7.2965.3,   MTR001269.7.2965.4
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv367118,225,066 - 118,225,737 (-)MPROMDB
RGD ID:6841001
Promoter ID:MM_KWN:52309
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_001040131,   NM_013507
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv367118,226,096 - 118,227,357 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:109207 AgrOrtholog
Ensembl Genes ENSMUSG00000005610 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000159305.2 UniProtKB/TrEMBL
  ENSMUST00000160132.8 UniProtKB/TrEMBL
  ENSMUST00000160966.2 UniProtKB/TrEMBL
  ENSMUST00000161051 ENTREZGENE
  ENSMUST00000161051.8 UniProtKB/TrEMBL
  ENSMUST00000162415 ENTREZGENE
  ENSMUST00000162415.9 UniProtKB/TrEMBL
  ENSMUST00000163014.2 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.180 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro ARM-type_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  IF4G UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Initiation_fac_eIF4g_MI UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MIF4G-like_typ-3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  W2_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:13690 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:109207 ENTREZGENE
NCBI Gene 13690 ENTREZGENE
PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR23253 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam MA3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MIF4G UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PF02020 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Eif4g2 PhenoGen
PROSITE PS51363 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PS51366 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART eIF5C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MA3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MIF4G UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48371 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0JNY7 ENTREZGENE, UniProtKB/TrEMBL
  F6TW20_MOUSE UniProtKB/TrEMBL
  F6UU81_MOUSE UniProtKB/TrEMBL
  F7CBP1 ENTREZGENE, UniProtKB/TrEMBL
  F7CHS2_MOUSE UniProtKB/TrEMBL
  F7DAB1_MOUSE UniProtKB/TrEMBL
  G3XA17 ENTREZGENE, UniProtKB/TrEMBL
  IF4G2_MOUSE UniProtKB/Swiss-Prot
  P97867 ENTREZGENE
  Q0VGZ3 ENTREZGENE
  Q3U9U9_MOUSE UniProtKB/TrEMBL
  Q3UNC1 ENTREZGENE
  Q3URI0_MOUSE UniProtKB/TrEMBL
  Q5XKD8 ENTREZGENE
  Q62448 ENTREZGENE
  Q6P1Z0 ENTREZGENE
  Q921U3 ENTREZGENE
UniProt Secondary P97867 UniProtKB/Swiss-Prot
  Q0VGZ3 UniProtKB/Swiss-Prot
  Q3UNC1 UniProtKB/Swiss-Prot
  Q5XKD8 UniProtKB/Swiss-Prot
  Q6P1Z0 UniProtKB/Swiss-Prot
  Q921U3 UniProtKB/Swiss-Prot