SLC25A28 (solute carrier family 25 member 28)

Gene: SLC25A28 (solute carrier family 25 member 28) Homo sapiens

Analyze

Symbol:

SLC25A28

Name:

solute carrier family 25 member 28

RGD ID:

1312988

HGNC Page

HGNC:23472

Description:

Predicted to enable ferrous iron transmembrane transporter activity. Predicted to be involved in iron import into the mitochondrion. Located in mitochondrion.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

DKFZp547C109; hMRS3/4; MFRN2; mitochondrial iron transporter 2; mitochondrial RNA splicing protein 3/4; mitochondrial RNA-splicing protein 3/4 homolog; mitoferrin 2; mitoferrin-2; MRS3/4; MRS4L; NPD016; putative mitochondrial solute carrier; solute carrier family 25 (mitochondrial iron transporter), member 28; solute carrier family 25, member 28

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Mus musculus (house mouse):	Slc25a28 (solute carrier family 25, member 28)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Slc25a28 (solute carrier family 25 member 28)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoMCL, Panther, PhylomeDB, Treefam
Chinchilla lanigera (long-tailed chinchilla):	Slc25a28 (solute carrier family 25 member 28)	NCBI	Ortholog
Pan paniscus (bonobo/pygmy chimpanzee):	SLC25A28 (solute carrier family 25 member 28)	NCBI	Ortholog
Canis lupus familiaris (dog):	SLC25A28 (solute carrier family 25 member 28)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoMCL, Panther, Treefam
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Slc25a28 (solute carrier family 25 member 28)	NCBI	Ortholog
Sus scrofa (pig):	SLC25A28 (solute carrier family 25 member 28)	HGNC	Ensembl, Inparanoid, NCBI, OrthoDB
Chlorocebus sabaeus (green monkey):	SLC25A28 (solute carrier family 25 member 28)	NCBI	Ortholog
Heterocephalus glaber (naked mole-rat):	Slc25a28 (solute carrier family 25 member 28)	NCBI	Ortholog
Other homologs ²
Rattus norvegicus (Norway rat):	Kif5a (kinesin family member 5A)	HGNC	OMA
Alliance orthologs ³
Mus musculus (house mouse):	Slc25a28 (solute carrier family 25, member 28)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Rattus norvegicus (Norway rat):	Slc25a28 (solute carrier family 25 member 28)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	slc25a28 (solute carrier family 25 member 28)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid\|ZFIN)
Saccharomyces cerevisiae (baker's yeast):	MRS3	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	mfn-1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	mfrn	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	MRS4	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	slc25a28	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus laevis (African clawed frog):	slc25a28.S	Alliance	DIOPT (Xenbase)
Xenopus laevis (African clawed frog):	slc25a28.L	Alliance	DIOPT (Xenbase)

Allele / Splice:

See ClinVar data

Latest Assembly:

GRCh38 - Human Genome Assembly GRCh38

Position:

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	99,610,522 - 99,659,286 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	99,610,519 - 99,622,793 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	10	101,370,279 - 101,380,196 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	101,360,265 - 101,370,211 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	10	101,360,271 - 101,370,090	NCBI
Celera	10	95,107,676 - 95,117,622 (-)	NCBI		Celera
Cytogenetic Map	10	q24.2	NCBI
HuRef	10	94,997,611 - 95,007,554 (-)	NCBI		HuRef
CHM1_1	10	101,652,707 - 101,662,649 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	10	100,493,405 - 100,542,276 (-)	NCBI		T2T-CHM13v2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2,3,7,8-Tetrachlorodibenzofuran (ISO)

4,4'-diaminodiphenylmethane (ISO)

6-propyl-2-thiouracil (ISO)

afimoxifene (EXP)

aflatoxin B1 (EXP,ISO)

antirheumatic drug (EXP)

aristolochic acid A (EXP)

arsenous acid (EXP)

benzo[a]pyrene (EXP)

bisphenol A (EXP,ISO)

cadmium dichloride (ISO)

CGP 52608 (EXP)

clofibrate (ISO)

cyclosporin A (ISO)

dextran sulfate (ISO)

diarsenic trioxide (EXP)

dibutyl phthalate (ISO)

ethanol (EXP)

folic acid (ISO)

gentamycin (ISO)

hexamethylene diisocyanate (EXP)

hypochlorous acid (ISO)

lead diacetate (ISO)

lipopolysaccharide (EXP)

methamphetamine (ISO)

methotrexate (ISO)

nickel atom (EXP)

nitrogen dioxide (EXP)

ozone (ISO)

paracetamol (EXP,ISO)

resveratrol (EXP)

S-(1,2-dichlorovinyl)-L-cysteine (EXP)

sodium arsenite (EXP)

thioacetamide (ISO)

trichloroethene (ISO)

triphenyl phosphate (ISO)

tunicamycin (EXP)

urethane (EXP)

valproic acid (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

iron import into the mitochondrion (IBA)

iron ion transport (IEA)

Cellular Component

membrane (IEA)

mitochondrial inner membrane (IEA)

mitochondrial membrane (IBA)

mitochondrion (IDA,IEA)

Molecular Function

ferrous iron transmembrane transporter activity (IBA)

Molecular Pathway Annotations Click to see Annotation Detail View

iron uptake pathway (TAS)

References

References - curated

#	Reference Title	Reference Citation
1.	GOAs Human GO annotations	GOA_HUMAN data from the GO Consortium
2.	Cellular iron uptake, trafficking and metabolism: Key molecules and mechanisms and their roles in disease.	Lane DJ, etal., Biochim Biophys Acta. 2015 May;1853(5):1130-44. doi: 10.1016/j.bbamcr.2015.01.021. Epub 2015 Feb 4.
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:11297739	PMID:12107412	PMID:12477932	PMID:14702039	PMID:15164054	PMID:15489334	PMID:16385451	PMID:16751776	PMID:20877624	PMID:21873635	PMID:22412388	PMID:23135267
PMID:23266187	PMID:23279374	PMID:24453475	PMID:24737748	PMID:28298427	PMID:28514442	PMID:30833792	PMID:32694731	PMID:33637726	PMID:33961781

Genomics

Comparative Map Data

SLC25A28
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	99,610,522 - 99,659,286 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	99,610,519 - 99,622,793 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	10	101,370,279 - 101,380,196 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	101,360,265 - 101,370,211 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	10	101,360,271 - 101,370,090	NCBI
Celera	10	95,107,676 - 95,117,622 (-)	NCBI		Celera
Cytogenetic Map	10	q24.2	NCBI
HuRef	10	94,997,611 - 95,007,554 (-)	NCBI		HuRef
CHM1_1	10	101,652,707 - 101,662,649 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	10	100,493,405 - 100,542,276 (-)	NCBI		T2T-CHM13v2.0

Slc25a28
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	19	43,652,240 - 43,663,320 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	19	43,652,240 - 43,663,320 (-)	Ensembl		GRCm39 Ensembl
GRCm38	19	43,663,801 - 43,675,006 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	19	43,663,801 - 43,674,881 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	19	43,738,291 - 43,749,371 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	19	43,717,112 - 43,728,192 (-)	NCBI		MGSCv36	mm8
Celera	19	44,450,345 - 44,461,383 (-)	NCBI		Celera
Cytogenetic Map	19	C3	NCBI
cM Map	19	36.67	NCBI

Slc25a28
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	252,480,106 - 252,491,365 (-)	NCBI		GRCr8
mRatBN7.2	1	242,530,877 - 242,542,140 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	242,530,899 - 242,542,115 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	250,680,428 - 250,691,691 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	257,377,462 - 257,388,721 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	250,030,582 - 250,041,843 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	263,420,039 - 263,431,312 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	263,420,061 - 263,431,290 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	270,865,547 - 270,876,806 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	247,159,998 - 247,171,232 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	1	238,351,706 - 238,362,976 (-)	NCBI		Celera
Cytogenetic Map	1	q54	NCBI

Slc25a28
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955507	5,521,255 - 5,530,895 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955507	5,520,915 - 5,530,615 (-)	NCBI	ChiLan1.0	ChiLan1.0

SLC25A28
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	111,519,808 - 111,568,472 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	111,525,128 - 111,573,792 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	96,227,847 - 96,276,246 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	10	99,720,193 - 99,730,276 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	10	99,720,193 - 99,729,881 (-)	Ensembl	panpan1.1		panPan2

SLC25A28
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	28	12,533,639 - 12,543,906 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	28	12,716,990 - 12,727,291 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	28	13,000,989 - 13,011,293 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	28	13,001,322 - 13,010,661 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	28	12,547,952 - 12,558,319 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	28	12,579,154 - 12,589,452 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	28	12,720,569 - 12,730,851 (-)	NCBI		UU_Cfam_GSD_1.0

Slc25a28
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	34,423,107 - 34,433,817 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936636	462,205 - 473,359 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936636	462,303 - 472,937 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLC25A28
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	110,795,307 - 110,805,570 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	110,795,304 - 110,805,631 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	120,241,473 - 120,251,800 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SLC25A28
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	92,669,107 - 92,679,059 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	9	92,668,856 - 92,679,026 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666048	53,665,337 - 53,675,293 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Slc25a28
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624737	11,311,772 - 11,324,821 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624737	11,314,907 - 11,324,823 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in SLC25A28
13 total Variants

Clinical Variants

Name	Type	Condition(s)	Position(s)	Clinical significance
GRCh38/hg38 10q23.33-25.3(chr10:95112607-116776637)x3	copy number gain	See cases [RCV000050747]	Chr10:95112607..116776637 [GRCh38] Chr10:96872364..118383651 [GRCh37] Chr10:96862354..118526138 [NCBI36] Chr10:10q23.33-25.3	pathogenic
GRCh38/hg38 10q24.2-24.31(chr10:99333940-100475567)x3	copy number gain	See cases [RCV000051647]	Chr10:99333940..100475567 [GRCh38] Chr10:101093697..102235324 [GRCh37] Chr10:101083687..102225314 [NCBI36] Chr10:10q24.2-24.31	uncertain significance
GRCh38/hg38 10q23.33-24.32(chr10:93181201-101356779)x1	copy number loss	See cases [RCV000052565]	Chr10:93181201..101356779 [GRCh38] Chr10:94940958..103116536 [GRCh37] Chr10:94930948..103106526 [NCBI36] Chr10:10q23.33-24.32	pathogenic
GRCh38/hg38 10q23.31-26.3(chr10:91048545-133620674)x3	copy number gain	Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053560]\|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053560]\|See cases [RCV000053560]	Chr10:91048545..133620674 [GRCh38] Chr10:92808302..135434178 [GRCh37] Chr10:92798282..135284168 [NCBI36] Chr10:10q23.31-26.3	pathogenic
NM_031212.3(SLC25A28):c.328C>T (p.Arg110Cys)	single nucleotide variant	Malignant melanoma [RCV000068766]	Chr10:99613888 [GRCh38] Chr10:101373645 [GRCh37] Chr10:101363635 [NCBI36] Chr10:10q24.2	not provided
GRCh38/hg38 10q24.2-24.31(chr10:99386632-100648221)x3	copy number gain	See cases [RCV000135650]	Chr10:99386632..100648221 [GRCh38] Chr10:101146389..102407978 [GRCh37] Chr10:101136379..102397968 [NCBI36] Chr10:10q24.2-24.31	uncertain significance
GRCh37/hg19 10p13-q26.3(chr10:12829206-135427143)	copy number loss	Distal 10q deletion syndrome [RCV003319583]	Chr10:12829206..135427143 [GRCh37] Chr10:10p13-q26.3	pathogenic
GRCh37/hg19 10q24.2-26.3(chr10:100780957-135427143)x3	copy number gain	See cases [RCV000446733]	Chr10:100780957..135427143 [GRCh37] Chr10:10q24.2-26.3	pathogenic
GRCh37/hg19 10q23.1-25.1(chr10:85557432-105804295)x1	copy number loss	Poly (ADP-Ribose) polymerase inhibitor response [RCV000431909]	Chr10:85557432..105804295 [GRCh37] Chr10:10q23.1-25.1	pathogenic\|drug response
GRCh37/hg19 10p15.3-q26.3(chr10:93297-135378918)x3	copy number gain	See cases [RCV000448750]	Chr10:93297..135378918 [GRCh37] Chr10:10p15.3-q26.3	pathogenic
GRCh37/hg19 10p15.3-q26.3(chr10:100027-135427143)	copy number gain	See cases [RCV000511389]	Chr10:100027..135427143 [GRCh37] Chr10:10p15.3-q26.3	pathogenic\|uncertain significance
GRCh37/hg19 10q23.32-26.3(chr10:93283493-135427143)x3	copy number gain	See cases [RCV000510972]	Chr10:93283493..135427143 [GRCh37] Chr10:10q23.32-26.3	pathogenic
GRCh37/hg19 10p15.3-q26.3(chr10:100027-135427143)x3	copy number gain	See cases [RCV000510861]	Chr10:100027..135427143 [GRCh37] Chr10:10p15.3-q26.3	pathogenic
GRCh37/hg19 10q11.21-26.3(chr10:42347406-135534747)x1	copy number loss	Poly (ADP-Ribose) polymerase inhibitor response [RCV000626438]	Chr10:42347406..135534747 [GRCh37] Chr10:10q11.21-26.3	drug response
GRCh37/hg19 10q23.32-24.2(chr10:93908171-101809723)x1	copy number loss	See cases [RCV000512315]	Chr10:93908171..101809723 [GRCh37] Chr10:10q23.32-24.2	pathogenic
GRCh37/hg19 10q23.33-26.3(chr10:94346520-135427143)x3	copy number gain	not provided [RCV000683291]	Chr10:94346520..135427143 [GRCh37] Chr10:10q23.33-26.3	pathogenic
GRCh37/hg19 10p15.3-q26.3(chr10:98087-135477883)x3	copy number gain	not provided [RCV000749465]	Chr10:98087..135477883 [GRCh37] Chr10:10p15.3-q26.3	pathogenic
GRCh37/hg19 10p15.3-q26.3(chr10:73232-135524321)x3	copy number gain	not provided [RCV000749464]	Chr10:73232..135524321 [GRCh37] Chr10:10p15.3-q26.3	pathogenic
NM_031212.4(SLC25A28):c.1006A>G (p.Ile336Val)	single nucleotide variant	not specified [RCV004291551]	Chr10:99610938 [GRCh38] Chr10:101370695 [GRCh37] Chr10:10q24.2	uncertain significance
NC_000010.10:g.(?_99344461)_(105992004_?)dup	duplication	not provided [RCV003107322]	Chr10:99344461..105992004 [GRCh37] Chr10:10q24.2-25.1	uncertain significance
NC_000010.10:g.(?_100177321)_(101611388_?)del	deletion	not provided [RCV001983006]	Chr10:100177321..101611388 [GRCh37] Chr10:10q24.2	pathogenic
NM_031212.4(SLC25A28):c.134A>C (p.Glu45Ala)	single nucleotide variant	not specified [RCV004200684]	Chr10:99620202 [GRCh38] Chr10:101379959 [GRCh37] Chr10:10q24.2	uncertain significance
NM_031212.4(SLC25A28):c.952G>A (p.Val318Ile)	single nucleotide variant	not specified [RCV004145944]	Chr10:99610992 [GRCh38] Chr10:101370749 [GRCh37] Chr10:10q24.2	uncertain significance
NM_031212.4(SLC25A28):c.80C>T (p.Ala27Val)	single nucleotide variant	not specified [RCV004180248]	Chr10:99620256 [GRCh38] Chr10:101380013 [GRCh37] Chr10:10q24.2	uncertain significance
NM_031212.4(SLC25A28):c.134A>T (p.Glu45Val)	single nucleotide variant	not specified [RCV004206652]	Chr10:99620202 [GRCh38] Chr10:101379959 [GRCh37] Chr10:10q24.2	uncertain significance
NM_031212.4(SLC25A28):c.178G>A (p.Gly60Ser)	single nucleotide variant	not specified [RCV004184519]	Chr10:99620158 [GRCh38] Chr10:101379915 [GRCh37] Chr10:10q24.2	uncertain significance
NM_031212.4(SLC25A28):c.134A>G (p.Glu45Gly)	single nucleotide variant	not specified [RCV004201141]	Chr10:99620202 [GRCh38] Chr10:101379959 [GRCh37] Chr10:10q24.2	uncertain significance
NM_031212.4(SLC25A28):c.820G>A (p.Val274Ile)	single nucleotide variant	not specified [RCV004134149]	Chr10:99611124 [GRCh38] Chr10:101370881 [GRCh37] Chr10:10q24.2	uncertain significance
NM_031212.4(SLC25A28):c.32T>G (p.Val11Gly)	single nucleotide variant	not specified [RCV004069677]	Chr10:99620304 [GRCh38] Chr10:101380061 [GRCh37] Chr10:10q24.2	uncertain significance
NM_031212.4(SLC25A28):c.110T>G (p.Val37Gly)	single nucleotide variant	not specified [RCV004200659]	Chr10:99620226 [GRCh38] Chr10:101379983 [GRCh37] Chr10:10q24.2	uncertain significance
GRCh37/hg19 10p14-q26.3(chr10:11138692-135427143)	copy number gain	Distal trisomy 10q [RCV003319593]	Chr10:11138692..135427143 [GRCh37] Chr10:10p14-q26.3	pathogenic
GRCh37/hg19 10q23.33-24.2(chr10:94283369-101820913)x1	copy number loss	not specified [RCV003986912]	Chr10:94283369..101820913 [GRCh37] Chr10:10q23.33-24.2	pathogenic
GRCh37/hg19 10q23.33-26.3(chr10:95078198-135427143)x3	copy number gain	not specified [RCV003986893]	Chr10:95078198..135427143 [GRCh37] Chr10:10q23.33-26.3	pathogenic
NM_031212.4(SLC25A28):c.964A>G (p.Thr322Ala)	single nucleotide variant	not specified [RCV004456489]	Chr10:99610980 [GRCh38] Chr10:101370737 [GRCh37] Chr10:10q24.2	uncertain significance
NM_031212.4(SLC25A28):c.1025C>T (p.Ala342Val)	single nucleotide variant	not specified [RCV004456482]	Chr10:99610919 [GRCh38] Chr10:101370676 [GRCh37] Chr10:10q24.2	uncertain significance
NM_031212.4(SLC25A28):c.121G>A (p.Ala41Thr)	single nucleotide variant	not specified [RCV004456484]	Chr10:99620215 [GRCh38] Chr10:101379972 [GRCh37] Chr10:10q24.2	uncertain significance
NM_031212.4(SLC25A28):c.116G>T (p.Arg39Leu)	single nucleotide variant	not specified [RCV004456483]	Chr10:99620220 [GRCh38] Chr10:101379977 [GRCh37] Chr10:10q24.2	uncertain significance
NM_031212.4(SLC25A28):c.122C>G (p.Ala41Gly)	single nucleotide variant	not specified [RCV004456485]	Chr10:99620214 [GRCh38] Chr10:101379971 [GRCh37] Chr10:10q24.2	uncertain significance
NM_031212.4(SLC25A28):c.151C>G (p.Pro51Ala)	single nucleotide variant	not specified [RCV004456486]	Chr10:99620185 [GRCh38] Chr10:101379942 [GRCh37] Chr10:10q24.2	uncertain significance
NM_031212.4(SLC25A28):c.35C>T (p.Ala12Val)	single nucleotide variant	not specified [RCV004456487]	Chr10:99620301 [GRCh38] Chr10:101380058 [GRCh37] Chr10:10q24.2	uncertain significance
NM_031212.4(SLC25A28):c.43C>T (p.Pro15Ser)	single nucleotide variant	not specified [RCV004456488]	Chr10:99620293 [GRCh38] Chr10:101380050 [GRCh37] Chr10:10q24.2	uncertain significance

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	1180
Count of miRNA genes:	559
Interacting mature miRNAs:	640
Transcripts:	ENST00000370495, ENST00000434701, ENST00000479722, ENST00000496035
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region

SLC25A28__6845

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	10	101,370,169 - 101,370,982	UniSTS	GRCh37
Build 36	10	101,360,159 - 101,360,972	RGD	NCBI36
Celera	10	95,107,570 - 95,108,383	RGD
HuRef	10	94,997,505 - 94,998,318	UniSTS

D10S2168

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	10	101,370,368 - 101,370,684	UniSTS	GRCh37
Build 36	10	101,360,358 - 101,360,674	RGD	NCBI36
Celera	10	95,107,769 - 95,108,085	RGD
Cytogenetic Map	10	q24.2	UniSTS
HuRef	10	94,997,704 - 94,998,020	UniSTS
Whitehead-YAC Contig Map	10		UniSTS

MARC_3591-3592:966880954:1

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	10	101,372,312 - 101,373,573	UniSTS	GRCh37
Build 36	10	101,362,302 - 101,363,563	RGD	NCBI36
Celera	10	95,109,713 - 95,110,974	RGD
HuRef	10	94,999,648 - 95,000,909	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system

circulatory system

endocrine system

exocrine system

hemolymphoid system

hepatobiliary system

integumental system

musculoskeletal system

nervous system

renal system

reproductive system

respiratory system

sensory system

adipose tissue

appendage

entire extraembryonic component

High

Medium

2431

2952

1722

622

1933

464

4355

2174

3708

418

1448

1608

171

1204

2788

Low

Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_031212	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005270208	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005270211	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006718005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006718006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_011540239	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_011540244	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_024448221	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_024448222	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_024448223	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_047425809	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_047425810	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_054366869	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_054366870	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_054366871	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_054366872	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_054366873	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_054366874	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_054366875	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AF267854	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF327402	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF327403	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AJ303077	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AJ303078	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK056782	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK094405	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL133353	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL353719	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL831943	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC015951	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC047312	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC058937	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC064541	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC076399	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC094821	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CD672723	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH471066	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CP068268	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENST00000370495 ⟹ ENSP00000359526

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	10	99,610,522 - 99,620,439 (-)	Ensembl

RefSeq Acc Id:

ENST00000434701 ⟹ ENSP00000399102

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	10	99,610,522 - 99,620,147 (-)	Ensembl

RefSeq Acc Id:

ENST00000479722

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	10	99,613,469 - 99,620,169 (-)	Ensembl

RefSeq Acc Id:

ENST00000496035

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	10	99,610,522 - 99,620,609 (-)	Ensembl

RefSeq Acc Id:

ENST00000700247 ⟹ ENSP00000514886

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	10	99,610,519 - 99,620,280 (-)	Ensembl

RefSeq Acc Id:

ENST00000700248 ⟹ ENSP00000514887

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	10	99,610,522 - 99,619,983 (-)	Ensembl

RefSeq Acc Id:

ENST00000700249 ⟹ ENSP00000514888

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	10	99,610,522 - 99,620,308 (-)	Ensembl

RefSeq Acc Id:

ENST00000700250 ⟹ ENSP00000514890

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	10	99,610,522 - 99,620,862 (-)	Ensembl

RefSeq Acc Id:

ENST00000700251 ⟹ ENSP00000514891

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	10	99,610,522 - 99,622,793 (-)	Ensembl

RefSeq Acc Id:

ENST00000700252

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	10	99,610,562 - 99,620,289 (-)	Ensembl

RefSeq Acc Id:

ENST00000700253

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	10	99,610,574 - 99,620,828 (-)	Ensembl

RefSeq Acc Id:

NM_031212 ⟹ NP_112489

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	10	99,610,522 - 99,620,439 (-)	NCBI
GRCh37	10	101,370,275 - 101,419,039 (-)	NCBI
Build 36	10	101,360,265 - 101,370,211 (-)	NCBI Archive
Celera	10	95,107,676 - 95,117,622 (-)	RGD
HuRef	10	94,997,611 - 95,007,554 (-)	ENTREZGENE
CHM1_1	10	101,652,707 - 101,662,649 (-)	NCBI
T2T-CHM13v2.0	10	100,493,405 - 100,503,319 (-)	NCBI

Sequence:

show sequence

GGGCTCTCTGGGCCGCGCCTGAGGCGGACACTACGGGGCCGGGGGGCGGCGGCGGCAGTGGTGG
CAGCGGCGGCGGGGGTGGGCGCCGCAGCTGGCCCGGGTGGATGGAGTTGGAGGGGCGGGGTGCT
GGCGGTGTGGCGGGGGGGCCGGCGGCAGGGCCCGGGCGGAGCCCCGGGGAGTCGGCGCTGCTGG
ACGGGTGGCTGCAGCGGGGCGTGGGCCGGGGGGCCGGCGGCGGGGAGGCCGGGGCCTGCAGGCC
CCCGGTACGACAAGATCCGGACTCCGGCCCGGACTACGAGGCGCTGCCGGCTGGAGCCACTGTC
ACCACGCACATGGTGGCAGGCGCCGTGGCAGGGATCCTGGAGCACTGCGTGATGTACCCCATCG
ACTGCGTCAAGACCCGGATGCAGAGTCTACAGCCTGACCCAGCTGCCCGCTATCGCAATGTGTT
GGAGGCCCTCTGGAGGATTATAAGAACGGAGGGCCTATGGAGGCCCATGAGGGGGCTGAACGTC
ACAGCAACAGGCGCAGGGCCTGCCCACGCCCTTTATTTTGCCTGCTACGAAAAGTTAAAAAAGA
CATTGAGTGATGTAATCCACCCTGGGGGCAATAGCCATATTGCCAATGGTGCGGCCGGGTGTGT
GGCAACATTACTTCATGATGCAGCCATGAACCCTGCGGAAGTGGTCAAGCAGAGGATGCAGATG
TACAACTCACCATACCACCGGGTGACAGACTGTGTACGGGCAGTGTGGCAAAATGAAGGGGCCG
GGGCCTTTTACCGCAGCTACACCACCCAGCTGACCATGAACGTTCCTTTCCAAGCCATTCACTT
CATGACCTATGAATTCCTGCAGGAGCACTTTAACCCCCAGAGACGGTACAACCCAAGCTCCCAC
GTCCTCTCTGGAGCTTGCGCAGGAGCTGTAGCTGCCGCAGCCACAACCCCACTGGACGTTTGCA
AAACACTGCTCAACACCCAGGAGTCCTTGGCTTTGAACTCACACATTACAGGACATATCACAGG
CATGGCTAGTGCCTTCAGGACGGTATATCAAGTAGGTGGGGTGACCGCCTATTTCCGAGGGGTG
CAGGCCAGAGTAATTTACCAGATCCCCTCCACAGCCATCGCATGGTCTGTGTATGAGTTCTTCA
AATACCTAATCACTAAAAGGCAAGAAGAGTGGAGGGCTGGCAAGTGAAGTAGCACTGAACGAAG
CCAGGGGTTCAGATGACACTGCTGCATCCTGGTCACATTCTCTGTCTCCTGGAATGCTCCCACC
TCAAGTGGAGTTAGAAGGAAGGTAGAGGGGCTCTCCCCCAGGATTTTGGTGTTTTGACTAACAC
CAGTTCCTGCCAACCTCTGTTGCCACCACCTTTCCTTCCAGGCCCTAAGCACGTGCAGCAAAGC
ACACCACAGCACCTTTGATAACCTCTCTCCATCCTGGGCCTGATGACCTGCTCTAGACTGTTAT
AGAGGGATAAGCAGCTCATTCCCCTGGTTCCTAATAAAAAGCCTTTAAATTAAA

hide sequence

RefSeq Acc Id:

XM_005270211 ⟹ XP_005270268

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	10	99,610,522 - 99,622,693 (-)	NCBI
GRCh37	10	101,370,275 - 101,419,039 (-)	NCBI

Sequence:

show sequence

CAACTGGTTTGGAATGGCAAAGTTCTCTAAGGTATTAAAGATGACCAAGAAGCATTAAACGTTT
AGGGATGTTCCACTTCAATGGCTAGAGAAGTGTAAGCGACTGAGATGTCTAAAAGACCCGGATG
CAGAGTCTACAGCCTGACCCAGCTGCCCGCTATCGCAATGTGTTGGAGGCCCTCTGGAGGATTA
TAAGAACGGAGGGCCTATGGAGGCCCATGAGGGGGCTGAACGTCACAGCAACAGGCGCAGGGCC
TGCCCACGCCCTTTATTTTGCCTGCTACGAAAAGTTAAAAAAGACATTGAGTGATGTAATCCAC
CCTGGGGGCAATAGCCATATTGCCAATGGTGCGGCCGGGTGTGTGGCAACATTACTTCATGATG
CAGCCATGAACCCTGCGGAAGTGGTCAAGCAGAGGATGCAGATGTACAACTCACCATACCACCG
GGTGACAGACTGTGTACGGGCAGTGTGGCAAAATGAAGGGGCCGGGGCCTTTTACCGCAGCTAC
ACCACCCAGCTGACCATGAACGTTCCTTTCCAAGCCATTCACTTCATGACCTATGAATTCCTGC
AGGAGCACTTTAACCCCCAGAGACGGTACAACCCAAGCTCCCACGTCCTCTCTGGAGCTTGCGC
AGGAGCTGTAGCTGCCGCAGCCACAACCCCACTGGACGTTTGCAAAACACTGCTCAACACCCAG
GAGTCCTTGGCTTTGAACTCACACATTACAGGACATATCACAGGCATGGCTAGTGCCTTCAGGA
CGGTATATCAAGTAGGTGGGGTGACCGCCTATTTCCGAGGGGTGCAGGCCAGAGTAATTTACCA
GATCCCCTCCACAGCCATCGCATGGTCTGTGTATGAGTTCTTCAAATACCTAATCACTAAAAGG
CAAGAAGAGTGGAGGGCTGGCAAGTGAAGTAGCACTGAACGAAGCCAGGGGTTCAGATGACACT
GCTGCATCCTGGTCACATTCTCTGTCTCCTGGAATGCTCCCACCTCAAGTGGAGTTAGAAGGAA
GGTAGAGGGGCTCTCCCCCAGGATTTTGGTGTTTTGACTAACACCAGTTCCTGCCAACCTCTGT
TGCCACCACCTTTCCTTCCAGGCCCTAAGCACGTGCAGCAAAGCACACCACAGCACCTTTGATA
ACCTCTCTCCATCCTGGGCCTGATGACCTGCTCTAGACTGTTATAGAGGGATAAGCAGCTCATT
CCCCTGGTTCCTAATAAAAAGCCTTTAAATTAAA

hide sequence

RefSeq Acc Id:

XM_006718005 ⟹ XP_006718068

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	10	99,610,522 - 99,659,286 (-)	NCBI

Sequence:

show sequence

AGGAGGGCCCGGCCGGCGGCGGCGCCACGTCCCCAAGGAAACCGCAGGGAGCCAATGACTGACA
GAAGACTCACGGAGGGGCCGGCTCTCCACGAGCCGAACCGGGGGCGAACCAGCTCGGTCAGCAG
CACGTCCGTCCGCCAGGGTGGCCAATCCCCTAGAGCGCTCGGCCTCTGATGCCCGCCCCGGGAC
TTTGAGCCGCGCCCAATCGGAAAGGCGTCGTACCGAGGCTCCGCCTGCAGGGCCCGCGGAGAGC
TCACAGACCCGGATGCAGAGTCTACAGCCTGACCCAGCTGCCCGCTATCGCAATGTGTTGGAGG
CCCTCTGGAGGATTATAAGAACGGAGGGCCTATGGAGGCCCATGAGGGGGCTGAACGTCACAGC
AACAGGCGCAGGGCCTGCCCACGCCCTTTATTTTGCCTGCTACGAAAAGTTAAAAAAGACATTG
AGTGATGTAATCCACCCTGGGGGCAATAGCCATATTGCCAATGGTGCGGCCGGGTGTGTGGCAA
CATTACTTCATGATGCAGCCATGAACCCTGCGGAAGTGGTCAAGCAGAGGATGCAGATGTACAA
CTCACCATACCACCGGGTGACAGACTGTGTACGGGCAGTGTGGCAAAATGAAGGGGCCGGGGCC
TTTTACCGCAGCTACACCACCCAGCTGACCATGAACGTTCCTTTCCAAGCCATTCACTTCATGA
CCTATGAATTCCTGCAGGAGCACTTTAACCCCCAGAGACGGTACAACCCAAGCTCCCACGTCCT
CTCTGGAGCTTGCGCAGGAGCTGTAGCTGCCGCAGCCACAACCCCACTGGACGTTTGCAAAACA
CTGCTCAACACCCAGGAGTCCTTGGCTTTGAACTCACACATTACAGGACATATCACAGGCATGG
CTAGTGCCTTCAGGACGGTATATCAAGTAGGTGGGGTGACCGCCTATTTCCGAGGGGTGCAGGC
CAGAGTAATTTACCAGATCCCCTCCACAGCCATCGCATGGTCTGTGTATGAGTTCTTCAAATAC
CTAATCACTAAAAGGCAAGAAGAGTGGAGGGCTGGCAAGTGAAGTAGCACTGAACGAAGCCAGG
GGTTCAGATGACACTGCTGCATCCTGGTCACATTCTCTGTCTCCTGGAATGCTCCCACCTCAAG
TGGAGTTAGAAGGAAGGTAGAGGGGCTCTCCCCCAGGATTTTGGTGTTTTGACTAACACCAGTT
CCTGCCAACCTCTGTTGCCACCACCTTTCCTTCCAGGCCCTAAGCACGTGCAGCAAAGCACACC
ACAGCACCTTTGATAACCTCTCTCCATCCTGGGCCTGATGACCTGCTCTAGACTGTTATAGAGG
GATAAGCAGCTCATTCCCCTGGTTCCTAATAAAAAGCCTTTAAATTAAA

hide sequence

RefSeq Acc Id:

XM_006718006 ⟹ XP_006718069

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	10	99,611,423 - 99,620,439 (-)	NCBI

Sequence:

show sequence

AAGCGGGAGCCGGAGGCCCCGGGCTCTCTGGGCCGCGCCTGAGGCGGACACTACGGGGCCGGGG
GGCGGCGGCGGCAGTGGTGGCAGCGGCGGCGGGGGTGGGCGCCGCAGCTGGCCCGGGTGGATGG
AGTTGGAGGGGCGGGGTGCTGGCGGTGTGGCGGGGGGGCCGGCGGCAGGGCCCGGGCGGAGCCC
CGGGGAGTCGGCGCTGCTGGACGGGTGGCTGCAGCGGGGCGTGGGCCGGGGGGCCGGCGGCGGG
GAGGCCGGGGCCTGCAGGCCCCCGGTACGACAAGATCCGGACTCCGGCCCGGACTACGAGGCGC
TGCCGGCTGGAGCCACTGTCACCACGCACATGGTGGCAGGCGCCGTGGCAGGGATCCTGGAGCA
CTGCGTGATGTACCCCATCGACTGCGTCAAGACCCGGATGCAGAGTCTACAGCCTGACCCAGCT
GCCCGCTATCGCAATGTGTTGGAGGCCCTCTGGAGGATTATAAGAACGGAGGGCCTATGGAGGC
CCATGAGGGGGCTGAACGTCACAGCAACAGGCGCAGGGCCTGCCCACGCCCTTTATTTTGCCTG
CTACGAAAAGTTAAAAAAGACATTGAGTGATGTAATCCACCCTGGGGGCAATAGCCATATTGCC
AATGGTGCGGCCGGGTGTGTGGCAACATTACTTCATGATGCAGCCATGAACCCTGCGGAAGGCT
GATCTGCTGACTTGGGGCTCTGAATCTGGATACT

hide sequence

RefSeq Acc Id:

XM_011540239 ⟹ XP_011538541

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	10	99,610,522 - 99,620,032 (-)	NCBI

Sequence:

show sequence

CCCGGCTTCGAACCCGACCTGGGGCTGACCCGACCCCTGGGTCTTGTCCGGAGCCAGGATCCCG
GCTGAGAGCCGGAGCCGACATGGGTTCCTTCCTGGCTCCTGCCACTACCACATGATTCGAACCG
ACACTCCATTCAAGCAAGGTCCCAGCTGGGAGTTGATCCCAGTCAGGAACCAGGACCTATTTCT
AACCGTCAGTGAAATCTGAATCGGGACTCAGGATCGAAAATCTGTCAGCCAAAGCCCTGGACCC
CACCTGGGACTAAACAGGAATAGGGTGGGATGGGGTATCCCGAAGCTCAGACCCGGATGCAGAG
TCTACAGCCTGACCCAGCTGCCCGCTATCGCAATGTGTTGGAGGCCCTCTGGAGGATTATAAGA
ACGGAGGGCCTATGGAGGCCCATGAGGGGGCTGAACGTCACAGCAACAGGCGCAGGGCCTGCCC
ACGCCCTTTATTTTGCCTGCTACGAAAAGTTAAAAAAGACATTGAGTGATGTAATCCACCCTGG
GGGCAATAGCCATATTGCCAATGGTGCGGCCGGGTGTGTGGCAACATTACTTCATGATGCAGCC
ATGAACCCTGCGGAAGTGGTCAAGCAGAGGATGCAGATGTACAACTCACCATACCACCGGGTGA
CAGACTGTGTACGGGCAGTGTGGCAAAATGAAGGGGCCGGGGCCTTTTACCGCAGCTACACCAC
CCAGCTGACCATGAACGTTCCTTTCCAAGCCATTCACTTCATGACCTATGAATTCCTGCAGGAG
CACTTTAACCCCCAGAGACGGTACAACCCAAGCTCCCACGTCCTCTCTGGAGCTTGCGCAGGAG
CTGTAGCTGCCGCAGCCACAACCCCACTGGACGTTTGCAAAACACTGCTCAACACCCAGGAGTC
CTTGGCTTTGAACTCACACATTACAGGACATATCACAGGCATGGCTAGTGCCTTCAGGACGGTA
TATCAAGTAGGTGGGGTGACCGCCTATTTCCGAGGGGTGCAGGCCAGAGTAATTTACCAGATCC
CCTCCACAGCCATCGCATGGTCTGTGTATGAGTTCTTCAAATACCTAATCACTAAAAGGCAAGA
AGAGTGGAGGGCTGGCAAGTGAAGTAGCACTGAACGAAGCCAGGGGTTCAGATGACACTGCTGC
ATCCTGGTCACATTCTCTGTCTCCTGGAATGCTCCCACCTCAAGTGGAGTTAGAAGGAAGGTAG
AGGGGCTCTCCCCCAGGATTTTGGTGTTTTGACTAACACCAGTTCCTGCCAACCTCTGTTGCCA
CCACCTTTCCTTCCAGGCCCTAAGCACGTGCAGCAAAGCACACCACAGCACCTTTGATAACCTC
TCTCCATCCTGGGCCTGATGACCTGCTCTAGACTGTTATAGAGGGATAAGCAGCTCATTCCCCT
GGTTCCTAATAAAAAGCCTTTAAATTAAA

hide sequence

RefSeq Acc Id:

XM_011540244 ⟹ XP_011538546

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	10	99,611,411 - 99,620,439 (-)	NCBI

Sequence:

show sequence

AAGCGGGAGCCGGAGGCCCCGGGCTCTCTGGGCCGCGCCTGAGGCGGACACTACGGGGCCGGGG
GGCGGCGGCGGCAGTGGTGGCAGCGGCGGCGGGGGTGGGCGCCGCAGCTGGCCCGGGTGGATGG
AGTTGGAGGGGCGGGGTGCTGGCGGTGTGGCGGGGGGGCCGGCGGCAGGGCCCGGGCGGAGCCC
CGGGGAGTCGGCGCTGCTGGACGGGTGGCTGCAGCGGGGCGTGGGCCGGGGGGCCGGCGGCGGG
GAGGCCGGGGCCTGCAGGCCCCCGGTACGACAAGATCCGGACTCCGGCCCGGACTACGAGGCGC
TGCCGGCTGGAGCCACTGTCACCACGCACATGGTGGCAGGCGCCGTGGCAGGGATCCTGGAGCA
CTGCGTGATGTACCCCATCGACTGCGTCAAGACCCGGATGCAGAGTCTACAGCCTGACCCAGCT
GCCCGCTATCGCAATGTGTTGGAGGCCCTCTGGAGGATTATAAGAACGGAGGGCCTATGGAGGC
CCATGAGGGGGCTGAACGTCACAGCAACAGGCGCAGGGCCTGCCCACGCCCTTTATTTTGCCTG
CTACGAAAAGTTAAAAAAGACATTGAGTGATGTAATCCACCCTGGGGGCAATAGCCATATTGCC
AATGGTGCGGCCGGGTGTGTGGCAACATTACTTCATGATGCAGCCATGAACCCTGCGGAAGACT
TGGGGCTCTGAATCTGGATACTCTCCATCACCGGTTGGCTGCTGTCACCATTTCCTTCC

hide sequence

RefSeq Acc Id:

XM_024448222 ⟹ XP_024303990

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	10	99,610,522 - 99,659,286 (-)	NCBI

Sequence:

show sequence

CGGAGAGCTCACAGGTGAGTGGCGCTGGGCGGCCCTGTGCCCGCTTCCCTCCCTGGGGCGCGAA
CTCTCGGCTGGTTGCTTTCTCCACGGCCGCTCCTGGGACAGAGTAGCTCCGGGCAAGCTGGCAG
CTGTCTGACTGGACCTGATGCCACTGGGCCTGGTAGGAAGACAGAATATCTGTTTTGGACCTTA
ACAGACCCGGATGCAGAGTCTACAGCCTGACCCAGCTGCCCGCTATCGCAATGTGTTGGAGGCC
CTCTGGAGGATTATAAGAACGGAGGGCCTATGGAGGCCCATGAGGGGGCTGAACGTCACAGCAA
CAGGCGCAGGGCCTGCCCACGCCCTTTATTTTGCCTGCTACGAAAAGTTAAAAAAGACATTGAG
TGATGTAATCCACCCTGGGGGCAATAGCCATATTGCCAATGGTGCGGCCGGGTGTGTGGCAACA
TTACTTCATGATGCAGCCATGAACCCTGCGGAAGTGGTCAAGCAGAGGATGCAGATGTACAACT
CACCATACCACCGGGTGACAGACTGTGTACGGGCAGTGTGGCAAAATGAAGGGGCCGGGGCCTT
TTACCGCAGCTACACCACCCAGCTGACCATGAACGTTCCTTTCCAAGCCATTCACTTCATGACC
TATGAATTCCTGCAGGAGCACTTTAACCCCCAGAGACGGTACAACCCAAGCTCCCACGTCCTCT
CTGGAGCTTGCGCAGGAGCTGTAGCTGCCGCAGCCACAACCCCACTGGACGTTTGCAAAACACT
GCTCAACACCCAGGAGTCCTTGGCTTTGAACTCACACATTACAGGACATATCACAGGCATGGCT
AGTGCCTTCAGGACGGTATATCAAGTAGGTGGGGTGACCGCCTATTTCCGAGGGGTGCAGGCCA
GAGTAATTTACCAGATCCCCTCCACAGCCATCGCATGGTCTGTGTATGAGTTCTTCAAATACCT
AATCACTAAAAGGCAAGAAGAGTGGAGGGCTGGCAAGTGAAGTAGCACTGAACGAAGCCAGGGG
TTCAGATGACACTGCTGCATCCTGGTCACATTCTCTGTCTCCTGGAATGCTCCCACCTCAAGTG
GAGTTAGAAGGAAGGTAGAGGGGCTCTCCCCCAGGATTTTGGTGTTTTGACTAACACCAGTTCC
TGCCAACCTCTGTTGCCACCACCTTTCCTTCCAGGCCCTAAGCACGTGCAGCAAAGCACACCAC
AGCACCTTTGATAACCTCTCTCCATCCTGGGCCTGATGACCTGCTCTAGACTGTTATAGAGGGA
TAAGCAGCTCATTCCCCTGGTTCCTAATAAAAAGCCTTTAAATTAAA

hide sequence

RefSeq Acc Id:

XM_024448223 ⟹ XP_024303991

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	10	99,610,522 - 99,659,286 (-)	NCBI

Sequence:

show sequence

GAACCGGGGGCGAACCAGCTCGGTCAGCAGCACGTCCGTCCGCCAGGGTGGCCAATCCCCTAGA
GCGCTCGGCCTCTGATGCCCGCCCCGGGACTTTGAGCCGCGCCCAATCGGAAAGGCGTCGTACC
GAGGCTCCGCCTGCAGGGCCCGCGGAGAGCTCACAGGGCAAGCTGGCAGCTGTCTGACTGGACC
TGATGCCACTGGGCCTGGTAGGAAGACAGAATATCTGTTTTGGACCTTAACAGACCCGGATGCA
GAGTCTACAGCCTGACCCAGCTGCCCGCTATCGCAATGTGTTGGAGGCCCTCTGGAGGATTATA
AGAACGGAGGGCCTATGGAGGCCCATGAGGGGGCTGAACGTCACAGCAACAGGCGCAGGGCCTG
CCCACGCCCTTTATTTTGCCTGCTACGAAAAGTTAAAAAAGACATTGAGTGATGTAATCCACCC
TGGGGGCAATAGCCATATTGCCAATGGTGCGGCCGGGTGTGTGGCAACATTACTTCATGATGCA
GCCATGAACCCTGCGGAAGTGGTCAAGCAGAGGATGCAGATGTACAACTCACCATACCACCGGG
TGACAGACTGTGTACGGGCAGTGTGGCAAAATGAAGGGGCCGGGGCCTTTTACCGCAGCTACAC
CACCCAGCTGACCATGAACGTTCCTTTCCAAGCCATTCACTTCATGACCTATGAATTCCTGCAG
GAGCACTTTAACCCCCAGAGACGGTACAACCCAAGCTCCCACGTCCTCTCTGGAGCTTGCGCAG
GAGCTGTAGCTGCCGCAGCCACAACCCCACTGGACGTTTGCAAAACACTGCTCAACACCCAGGA
GTCCTTGGCTTTGAACTCACACATTACAGGACATATCACAGGCATGGCTAGTGCCTTCAGGACG
GTATATCAAGTAGGTGGGGTGACCGCCTATTTCCGAGGGGTGCAGGCCAGAGTAATTTACCAGA
TCCCCTCCACAGCCATCGCATGGTCTGTGTATGAGTTCTTCAAATACCTAATCACTAAAAGGCA
AGAAGAGTGGAGGGCTGGCAAGTGAAGTAGCACTGAACGAAGCCAGGGGTTCAGATGACACTGC
TGCATCCTGGTCACATTCTCTGTCTCCTGGAATGCTCCCACCTCAAGTGGAGTTAGAAGGAAGG
TAGAGGGGCTCTCCCCCAGGATTTTGGTGTTTTGACTAACACCAGTTCCTGCCAACCTCTGTTG
CCACCACCTTTCCTTCCAGGCCCTAAGCACGTGCAGCAAAGCACACCACAGCACCTTTGATAAC
CTCTCTCCATCCTGGGCCTGATGACCTGCTCTAGACTGTTATAGAGGGATAAGCAGCTCATTCC
CCTGGTTCCTAATAAAAAGCCTTTAAATTAAA

hide sequence

RefSeq Acc Id:

XM_047425809 ⟹ XP_047281765

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	10	99,610,522 - 99,620,880 (-)	NCBI

RefSeq Acc Id:

XM_047425810 ⟹ XP_047281766

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	10	99,610,522 - 99,613,870 (-)	NCBI

RefSeq Acc Id:

XM_054366869 ⟹ XP_054222844

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
T2T-CHM13v2.0	10	100,493,405 - 100,502,912 (-)	NCBI

RefSeq Acc Id:

XM_054366870 ⟹ XP_054222845

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
T2T-CHM13v2.0	10	100,493,405 - 100,542,276 (-)	NCBI

RefSeq Acc Id:

XM_054366871 ⟹ XP_054222846

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
T2T-CHM13v2.0	10	100,493,405 - 100,500,755 (-)	NCBI

RefSeq Acc Id:

XM_054366872 ⟹ XP_054222847

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
T2T-CHM13v2.0	10	100,493,405 - 100,505,572 (-)	NCBI

RefSeq Acc Id:

XM_054366873 ⟹ XP_054222848

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
T2T-CHM13v2.0	10	100,493,405 - 100,496,753 (-)	NCBI

RefSeq Acc Id:

XM_054366874 ⟹ XP_054222849

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
T2T-CHM13v2.0	10	100,494,294 - 100,503,319 (-)	NCBI

RefSeq Acc Id:

XM_054366875 ⟹ XP_054222850

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
T2T-CHM13v2.0	10	100,494,306 - 100,503,319 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_112489	(Get FASTA)	NCBI Sequence Viewer
	XP_005270268	(Get FASTA)	NCBI Sequence Viewer
	XP_006718068	(Get FASTA)	NCBI Sequence Viewer
	XP_006718069	(Get FASTA)	NCBI Sequence Viewer
	XP_011538541	(Get FASTA)	NCBI Sequence Viewer
	XP_011538546	(Get FASTA)	NCBI Sequence Viewer
	XP_024303990	(Get FASTA)	NCBI Sequence Viewer
	XP_024303991	(Get FASTA)	NCBI Sequence Viewer
	XP_047281765	(Get FASTA)	NCBI Sequence Viewer
	XP_047281766	(Get FASTA)	NCBI Sequence Viewer
	XP_054222844	(Get FASTA)	NCBI Sequence Viewer
	XP_054222845	(Get FASTA)	NCBI Sequence Viewer
	XP_054222846	(Get FASTA)	NCBI Sequence Viewer
	XP_054222847	(Get FASTA)	NCBI Sequence Viewer
	XP_054222848	(Get FASTA)	NCBI Sequence Viewer
	XP_054222849	(Get FASTA)	NCBI Sequence Viewer
	XP_054222850	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAG44723	(Get FASTA)	NCBI Sequence Viewer
	AAH47312	(Get FASTA)	NCBI Sequence Viewer
	AAH58937	(Get FASTA)	NCBI Sequence Viewer
	AAH76399	(Get FASTA)	NCBI Sequence Viewer
	AAH94821	(Get FASTA)	NCBI Sequence Viewer
	AAK49519	(Get FASTA)	NCBI Sequence Viewer
	AAK49520	(Get FASTA)	NCBI Sequence Viewer
	CAC27996	(Get FASTA)	NCBI Sequence Viewer
	CAC27997	(Get FASTA)	NCBI Sequence Viewer
	CAH10774	(Get FASTA)	NCBI Sequence Viewer
	EAW49863	(Get FASTA)	NCBI Sequence Viewer
	EAW49864	(Get FASTA)	NCBI Sequence Viewer
	EAW49865	(Get FASTA)	NCBI Sequence Viewer
	EAW49866	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSP00000359526
	ENSP00000359526.4
	ENSP00000399102.1
	ENSP00000514886.1
	ENSP00000514887.1
	ENSP00000514888.1
	ENSP00000514889.1
	ENSP00000514890.1
	ENSP00000514891
	ENSP00000514891.1
GenBank Protein	Q96A46	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_112489 ⟸ NM_031212

- UniProtKB:

Q969G8 (UniProtKB/Swiss-Prot), Q86VX5 (UniProtKB/Swiss-Prot), Q5T777 (UniProtKB/Swiss-Prot), Q4VBZ0 (UniProtKB/Swiss-Prot), Q9H2J3 (UniProtKB/Swiss-Prot), Q96A46 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MELEGRGAGGVAGGPAAGPGRSPGESALLDGWLQRGVGRGAGGGEAGACRPPVRQDPDSGPDYE
ALPAGATVTTHMVAGAVAGILEHCVMYPIDCVKTRMQSLQPDPAARYRNVLEALWRIIRTEGLW
RPMRGLNVTATGAGPAHALYFACYEKLKKTLSDVIHPGGNSHIANGAAGCVATLLHDAAMNPAE
VVKQRMQMYNSPYHRVTDCVRAVWQNEGAGAFYRSYTTQLTMNVPFQAIHFMTYEFLQEHFNPQ
RRYNPSSHVLSGACAGAVAAAATTPLDVCKTLLNTQESLALNSHITGHITGMASAFRTVYQVGG
VTAYFRGVQARVIYQIPSTAIAWSVYEFFKYLITKRQEEWRAGK

hide sequence

RefSeq Acc Id:	XP_005270268 ⟸ XM_005270211
- Peptide Label:	isoform X2
- UniProtKB:	A0A8V8TR30 (UniProtKB/TrEMBL), A0A8V8TQS6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MQSLQPDPAARYRNVLEALWRIIRTEGLWRPMRGLNVTATGAGPAHALYFACYEKLKKTLSDVI HPGGNSHIANGAAGCVATLLHDAAMNPAEVVKQRMQMYNSPYHRVTDCVRAVWQNEGAGAFYRS YTTQLTMNVPFQAIHFMTYEFLQEHFNPQRRYNPSSHVLSGACAGAVAAAATTPLDVCKTLLNT QESLALNSHITGHITGMASAFRTVYQVGGVTAYFRGVQARVIYQIPSTAIAWSVYEFFKYLITK RQEEWRAGK hide sequence

RefSeq Acc Id:	XP_006718068 ⟸ XM_006718005
- Peptide Label:	isoform X2
- UniProtKB:	A0A8V8TR30 (UniProtKB/TrEMBL), A0A8V8TQS6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MQSLQPDPAARYRNVLEALWRIIRTEGLWRPMRGLNVTATGAGPAHALYFACYEKLKKTLSDVI HPGGNSHIANGAAGCVATLLHDAAMNPAEVVKQRMQMYNSPYHRVTDCVRAVWQNEGAGAFYRS YTTQLTMNVPFQAIHFMTYEFLQEHFNPQRRYNPSSHVLSGACAGAVAAAATTPLDVCKTLLNT QESLALNSHITGHITGMASAFRTVYQVGGVTAYFRGVQARVIYQIPSTAIAWSVYEFFKYLITK RQEEWRAGK hide sequence

RefSeq Acc Id:	XP_006718069 ⟸ XM_006718006
- Peptide Label:	isoform X5
- Sequence:	show sequence MELEGRGAGGVAGGPAAGPGRSPGESALLDGWLQRGVGRGAGGGEAGACRPPVRQDPDSGPDYE ALPAGATVTTHMVAGAVAGILEHCVMYPIDCVKTRMQSLQPDPAARYRNVLEALWRIIRTEGLW RPMRGLNVTATGAGPAHALYFACYEKLKKTLSDVIHPGGNSHIANGAAGCVATLLHDAAMNPAE G hide sequence

RefSeq Acc Id:	XP_011538541 ⟸ XM_011540239
- Peptide Label:	isoform X1
- UniProtKB:	A0A8V8TQS6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGYPEAQTRMQSLQPDPAARYRNVLEALWRIIRTEGLWRPMRGLNVTATGAGPAHALYFACYEK LKKTLSDVIHPGGNSHIANGAAGCVATLLHDAAMNPAEVVKQRMQMYNSPYHRVTDCVRAVWQN EGAGAFYRSYTTQLTMNVPFQAIHFMTYEFLQEHFNPQRRYNPSSHVLSGACAGAVAAAATTPL DVCKTLLNTQESLALNSHITGHITGMASAFRTVYQVGGVTAYFRGVQARVIYQIPSTAIAWSVY EFFKYLITKRQEEWRAGK hide sequence

RefSeq Acc Id:	XP_011538546 ⟸ XM_011540244
- Peptide Label:	isoform X4
- Sequence:	show sequence MELEGRGAGGVAGGPAAGPGRSPGESALLDGWLQRGVGRGAGGGEAGACRPPVRQDPDSGPDYE ALPAGATVTTHMVAGAVAGILEHCVMYPIDCVKTRMQSLQPDPAARYRNVLEALWRIIRTEGLW RPMRGLNVTATGAGPAHALYFACYEKLKKTLSDVIHPGGNSHIANGAAGCVATLLHDAAMNPAE DLGL hide sequence

RefSeq Acc Id:	XP_024303991 ⟸ XM_024448223
- Peptide Label:	isoform X2
- UniProtKB:	A0A8V8TR30 (UniProtKB/TrEMBL), A0A8V8TQS6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MQSLQPDPAARYRNVLEALWRIIRTEGLWRPMRGLNVTATGAGPAHALYFACYEKLKKTLSDVI HPGGNSHIANGAAGCVATLLHDAAMNPAEVVKQRMQMYNSPYHRVTDCVRAVWQNEGAGAFYRS YTTQLTMNVPFQAIHFMTYEFLQEHFNPQRRYNPSSHVLSGACAGAVAAAATTPLDVCKTLLNT QESLALNSHITGHITGMASAFRTVYQVGGVTAYFRGVQARVIYQIPSTAIAWSVYEFFKYLITK RQEEWRAGK hide sequence

RefSeq Acc Id:	XP_024303990 ⟸ XM_024448222
- Peptide Label:	isoform X2
- UniProtKB:	A0A8V8TR30 (UniProtKB/TrEMBL), A0A8V8TQS6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MQSLQPDPAARYRNVLEALWRIIRTEGLWRPMRGLNVTATGAGPAHALYFACYEKLKKTLSDVI HPGGNSHIANGAAGCVATLLHDAAMNPAEVVKQRMQMYNSPYHRVTDCVRAVWQNEGAGAFYRS YTTQLTMNVPFQAIHFMTYEFLQEHFNPQRRYNPSSHVLSGACAGAVAAAATTPLDVCKTLLNT QESLALNSHITGHITGMASAFRTVYQVGGVTAYFRGVQARVIYQIPSTAIAWSVYEFFKYLITK RQEEWRAGK hide sequence

RefSeq Acc Id:

ENSP00000359526 ⟸ ENST00000370495

RefSeq Acc Id:

ENSP00000399102 ⟸ ENST00000434701

RefSeq Acc Id:	XP_047281765 ⟸ XM_047425809
- Peptide Label:	isoform X2
- UniProtKB:	A0A8V8TR30 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_047281766 ⟸ XM_047425810
- Peptide Label:	isoform X3

RefSeq Acc Id:

ENSP00000514890 ⟸ ENST00000700250

RefSeq Acc Id:

ENSP00000514886 ⟸ ENST00000700247

RefSeq Acc Id:

ENSP00000514888 ⟸ ENST00000700249

RefSeq Acc Id:

ENSP00000514887 ⟸ ENST00000700248

RefSeq Acc Id:

ENSP00000514891 ⟸ ENST00000700251

RefSeq Acc Id:	XP_054222845 ⟸ XM_054366870
- Peptide Label:	isoform X2
- UniProtKB:	A0A8V8TR30 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_054222847 ⟸ XM_054366872
- Peptide Label:	isoform X2
- UniProtKB:	A0A8V8TR30 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_054222844 ⟸ XM_054366869
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_054222846 ⟸ XM_054366871
- Peptide Label:	isoform X2
- UniProtKB:	A0A8V8TR30 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_054222848 ⟸ XM_054366873
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_054222849 ⟸ XM_054366874
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_054222850 ⟸ XM_054366875
- Peptide Label:	isoform X5

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q96A46-F1-model_v2	AlphaFold	Q96A46	1-364	view protein structure

Promoters

RGD ID:

7218373

Promoter ID:

EPDNEW_H14933

Type:

initiation region

Name:

SLC25A28_1

Description:

solute carrier family 25 member 28

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_H14934

Experiment Methods:

Single-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	10	99,620,430 - 99,620,490	EPDNEW

RGD ID:

7218379

Promoter ID:

EPDNEW_H14934

Type:

initiation region

Name:

SLC25A28_2

Description:

solute carrier family 25 member 28

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_H14933

Experiment Methods:

Single-end sequencing.; Paired-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	10	99,659,249 - 99,659,309	EPDNEW

RGD ID:

6788263

Promoter ID:

HG_KWN:10818

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

CD4+TCell, CD4+TCell_12Hour, HeLa_S3, K562, Lymphoblastoid, NB4

Transcripts:

OTTHUMT00000049807

Position:

Human Assembly	Chr	Position (strand)	Source
Build 36	10	101,362,091 - 101,363,292 (-)	MPROMDB

RGD ID:

6788262

Promoter ID:

HG_KWN:10819

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

CD4+TCell, CD4+TCell_12Hour, CD4+TCell_2Hour, HeLa_S3, Jurkat, K562, Lymphoblastoid, NB4

Transcripts:

NM_031212, OTTHUMT00000049802, OTTHUMT00000049803, OTTHUMT00000049804, OTTHUMT00000049806, UC009XWK.1

Position:

Human Assembly	Chr	Position (strand)	Source
Build 36	10	101,370,076 - 101,371,177 (-)	MPROMDB

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	HGNC:23472	AgrOrtholog
COSMIC	SLC25A28	COSMIC
Ensembl Genes	ENSG00000155287	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript	ENST00000370495	ENTREZGENE
	ENST00000370495.6	UniProtKB/Swiss-Prot
	ENST00000434701.5	UniProtKB/TrEMBL
	ENST00000496035.2	UniProtKB/TrEMBL
	ENST00000700247.1	UniProtKB/TrEMBL
	ENST00000700248.1	UniProtKB/TrEMBL
	ENST00000700249.1	UniProtKB/TrEMBL
	ENST00000700250.1	UniProtKB/TrEMBL
	ENST00000700251	ENTREZGENE
	ENST00000700251.1	UniProtKB/TrEMBL
Gene3D-CATH	1.50.40.10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx	ENSG00000155287	GTEx
HGNC ID	HGNC:23472	ENTREZGENE
Human Proteome Map	SLC25A28	Human Proteome Map
InterPro	Mitochondrial_sb/sol_carrier	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Mt_carrier_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	hsa:81894	UniProtKB/Swiss-Prot
NCBI Gene	81894	ENTREZGENE
OMIM	609767	OMIM
PANTHER	MITOFERRIN-1-RELATED	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	MITOFERRIN-2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	Mito_carr	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB	PA134867966	PharmGKB
PROSITE	SOLCAR	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF103506	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A8V8TPH6_HUMAN	UniProtKB/TrEMBL
	A0A8V8TQ16_HUMAN	UniProtKB/TrEMBL
	A0A8V8TQS6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8V8TR30	ENTREZGENE, UniProtKB/TrEMBL
	MFRN2_HUMAN	UniProtKB/Swiss-Prot
	Q4VBZ0	ENTREZGENE
	Q5T777	ENTREZGENE
	Q86VX5	ENTREZGENE
	Q969G8	ENTREZGENE
	Q96A46	ENTREZGENE
	Q9H2J3	ENTREZGENE
	X6RFA8_HUMAN	UniProtKB/TrEMBL
UniProt Secondary	Q4VBZ0	UniProtKB/Swiss-Prot
	Q5T777	UniProtKB/Swiss-Prot
	Q86VX5	UniProtKB/Swiss-Prot
	Q969G8	UniProtKB/Swiss-Prot
	Q9H2J3	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-02-23	SLC25A28	solute carrier family 25 member 28		solute carrier family 25 (mitochondrial iron transporter), member 28	Symbol and/or name change	5135510	APPROVED
2012-04-03	SLC25A28	solute carrier family 25 (mitochondrial iron transporter), member 28	SLC25A28	solute carrier family 25, member 28	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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RGD Manual Annotations