Cdc14a (CDC14 cell division cycle 14A) - Rat Genome Database

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Gene: Cdc14a (CDC14 cell division cycle 14A) Mus musculus
Analyze
Symbol: Cdc14a
Name: CDC14 cell division cycle 14A
RGD ID: 1312212
MGI Page MGI
Description: Predicted to enable protein serine/threonine phosphatase activity and protein tyrosine phosphatase activity. Involved in sensory perception of sound. Located in kinociliary basal body and stereocilium tip. Is expressed in several structures, including alimentary system; brain; cardiovascular system; genitourinary system; and sensory organ. Used to study autosomal recessive nonsyndromic deafness 32. Human ortholog(s) of this gene implicated in autosomal recessive nonsyndromic deafness 32. Orthologous to human CDC14A (cell division cycle 14A).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: A830059A17Rik; Cdc14; CDC14 cell division cycle 14 homolog A; CDC14a1; CDC14A2; dual specificity protein phosphatase CDC14A
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393116,066,202 - 116,222,390 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl3116,066,202 - 116,222,394 (-)EnsemblGRCm39 Ensembl
GRCm383116,272,553 - 116,428,741 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3116,272,553 - 116,428,745 (-)EnsemblGRCm38mm10GRCm38
MGSCv373115,975,471 - 116,126,950 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv363116,608,926 - 116,759,661 (-)NCBIMGSCv36mm8
MGSCv363116,264,557 - 116,416,036 (-)NCBIMGSCv36mm8
Celera3122,716,884 - 122,851,142 (-)NCBICelera
Cytogenetic Map3G1NCBI
cM Map350.24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Updating the RNA polymerase CTD code: adding gene-specific layers. Egloff S, etal., Trends Genet. 2012 Jul;28(7):333-41. doi: 10.1016/j.tig.2012.03.007. Epub 2012 May 21.
2. The writers, readers, and functions of the RNA polymerase II C-terminal domain code. Jeronimo C, etal., Chem Rev. 2013 Nov 13;113(11):8491-522. doi: 10.1021/cr4001397. Epub 2013 Jul 10.
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
8. Database resources of the National Center for Biotechnology Information. Wheeler DL, etal., Nucleic Acids Res 2001 Jan 1;29(1):11-6.
Additional References at PubMed
PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12477932   PMID:14610273   PMID:14681479   PMID:15489334   PMID:16141072   PMID:16141073   PMID:18481975  
PMID:19270517   PMID:20720150   PMID:21873635   PMID:21931791   PMID:23375831   PMID:23676271   PMID:24194600   PMID:26283732   PMID:29293958   PMID:31545409   PMID:32679235   PMID:36326833  
PMID:38355793  


Genomics

Comparative Map Data
Cdc14a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393116,066,202 - 116,222,390 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl3116,066,202 - 116,222,394 (-)EnsemblGRCm39 Ensembl
GRCm383116,272,553 - 116,428,741 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3116,272,553 - 116,428,745 (-)EnsemblGRCm38mm10GRCm38
MGSCv373115,975,471 - 116,126,950 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv363116,608,926 - 116,759,661 (-)NCBIMGSCv36mm8
MGSCv363116,264,557 - 116,416,036 (-)NCBIMGSCv36mm8
Celera3122,716,884 - 122,851,142 (-)NCBICelera
Cytogenetic Map3G1NCBI
cM Map350.24NCBI
CDC14A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381100,345,001 - 100,520,277 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1100,345,001 - 100,520,277 (+)EnsemblGRCh38hg38GRCh38
GRCh371100,810,557 - 100,985,833 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361100,590,611 - 100,758,421 (+)NCBINCBI36Build 36hg18NCBI36
Celera199,079,156 - 99,246,987 (+)NCBICelera
Cytogenetic Map1p21.2NCBI
HuRef198,941,758 - 99,109,581 (+)NCBIHuRef
CHM1_11100,934,209 - 101,101,908 (+)NCBICHM1_1
T2T-CHM13v2.01100,192,980 - 100,368,314 (+)NCBIT2T-CHM13v2.0
Cdc14a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82206,910,475 - 207,070,537 (-)NCBIGRCr8
mRatBN7.22204,225,540 - 204,380,927 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2204,225,540 - 204,380,927 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2211,889,131 - 212,044,352 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02209,783,936 - 209,945,711 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02204,600,985 - 204,762,781 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02219,302,577 - 219,458,345 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2219,302,577 - 219,458,271 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02237,754,786 - 237,915,834 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42212,495,540 - 212,652,895 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12212,459,352 - 212,615,522 (-)NCBI
Celera2196,721,585 - 196,876,703 (-)NCBICelera
Cytogenetic Map2q42NCBI
Cdc14a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554355,099,107 - 5,248,679 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554355,099,576 - 5,230,252 (+)NCBIChiLan1.0ChiLan1.0
CDC14A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21126,507,194 - 126,677,627 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11125,665,337 - 125,835,694 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01103,002,408 - 103,178,622 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11101,716,711 - 101,892,619 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1101,724,213 - 101,892,619 (+)Ensemblpanpan1.1panPan2
CDC14A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1649,429,675 - 49,678,376 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl649,497,939 - 49,693,665 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha652,057,984 - 52,349,812 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0649,861,063 - 50,019,311 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl649,861,010 - 50,042,321 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1649,424,649 - 49,717,496 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0649,404,432 - 49,696,446 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0649,834,388 - 50,126,448 (-)NCBIUU_Cfam_GSD_1.0
LOC101972535
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405058110,673,903 - 110,806,831 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936748479,503 - 623,126 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936748479,026 - 612,554 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CDC14A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl4117,635,861 - 117,805,254 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.14117,635,849 - 117,804,568 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24129,230,515 - 129,319,122 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CDC14A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12032,822,748 - 32,987,739 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2032,822,746 - 32,986,718 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603825,071,050 - 25,235,874 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cdc14a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248573,245,934 - 3,417,199 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248573,246,027 - 3,416,536 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Cdc14a
5603 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2075
Count of miRNA genes:607
Interacting mature miRNAs:795
Transcripts:ENSMUST00000090464, ENSMUST00000106491, ENSMUST00000127704, ENSMUST00000136994, ENSMUST00000148857
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
26884436Zlq3_mzygomatic length QTL 3, 10 week (mouse)33265060142405761Mouse
13207570Tcq12_mtotal cholesterol QTL 12 (mouse)316504164130163649Mouse
26884422Cvht7_mcranial vault height 7, 16 week (mouse)328954149118893649Mouse
1302056Orgwq4_morgan weight QTL 4 (mouse)Not determined330067588147304689Mouse
1301705Sles3_msystemic lupus erythmatosus suppressor 3 (mouse)Not determined337174862143353183Mouse
26884382Bzwq1_mbi-zygomatic width QTL 1, 5 week (mouse)352207421137205761Mouse
25314313Syncl1_msynaptonemal complex length 1 (mouse)367907333128393649Mouse
1301904Iba2_minduction of brown adipocytes 2 (mouse)Not determined382147043116147184Mouse
11041900Lmr11a_mleishmaniasis resistance 11a (mouse)383463991117464137Mouse
11039510Ltpr3d_mLeishmania tropica response 3d (mouse)383463991117464137Mouse
11039511Ltpr3c_mLeishmania tropica response 3c (mouse)383463991117464137Mouse
11039507Ltpr3g_mLeishmania tropica response 3g (mouse)383463991117464137Mouse
11039508Ltpr3f_mLeishmania tropica response 3f (mouse)383463991117464137Mouse
11039509Ltpr3e_mLeishmania tropica response 3e (mouse)383463991117464137Mouse
11039512Ltpr3b_mLeishmania tropica response 3b (mouse)383463991117464137Mouse
1301272Cfsw1_mcystic fibrosis survival to weaning 1 (mouse)Not determined383882912117883044Mouse
4142099Cq3_mcholesterol QTL 3 (mouse)Not determined384888918118889067Mouse
14746984Manh54_mmandible shape 54 (mouse)385289152119289152Mouse
1357583Sle18_msystematic lupus erythematosus susceptibility 18 (mouse)Not determined387208904125316236Mouse
12738440Twq3_mtestis weight QTL 3 (mouse)387228015121228015Mouse
4142178Ctrq2_mC. trachomatis resistance QTL 2 (mouse)Not determined389139967137453008Mouse
10766455Sle22_msystematic lupus erythematosus susceptibility 22 (mouse)390376936124377072Mouse
14747001Mancz4_mmandible centroid size 4 (mouse)390378017124378017Mouse
1302052Etohcta4_methanol conditioned taste aversion 4 (mouse)Not determined391000105125008748Mouse
1301349Pgia26_mproteoglycan induced arthritis 26 (mouse)Not determined392251533126251650Mouse
27226732Tibmd3_mtibia midshaft diameter 3, 10 week (mouse)396607316147805636Mouse
10043955Wt10q4_mbody weight, 10 weeks, QTL 4 (mouse)Not determined398624041132624197Mouse
11533920Mvb3_mmodifier of vibrator 3 (mouse)398635284132635383Mouse
12792984Modn1_mmodifier of Dstn neovascularization 1 (mouse)398635284132635383Mouse
1302114Tbs1_mtuberculosis severity 1 (mouse)Not determined398924105132924250Mouse
1300752Ap6q_malcohol preference 6 QTL (mouse)Not determined3100372912147045722Mouse
26884419Bzwq6_mbi-zygomatic width QTL 6, 10 week (mouse)3100607316137205761Mouse
27226733Tibmd6_mtibia midshaft diameter 6, 16 week (mouse)3101307316149805637Mouse
1301805Mors2_mmodifier of obesity related sterility 2 (mouse)Not determined3103482659137482783Mouse
8655599Cia5c_mcollagen induced arthritis QTL 5c (mouse)Not determined3107376936125316237Mouse
1302093Orgwq5_morgan weight QTL 5 (mouse)Not determined3107376936147304689Mouse
1300619Cdcs1_mcytokine deficiency colitis susceptibility 1 (mouse)Not determined3109834882143835005Mouse
12910793Pwbwq7_mpost-weaning body weight QTL 7 (mouse)3110084357135715812Mouse
12910796Pwbwq6_mpost-weaning body weight QTL 6 (mouse)3110084357135715812Mouse
12910815Ogrq1_moverall growth rate QTL 1 (mouse)3110084357135715812Mouse
1301381Bomb1_mbone marrow pre-B 1 (mouse)Not determined3111133243145133417Mouse
1301100Bdt2_mbone density traits 2 (mouse)Not determined3114736617148736784Mouse

Markers in Region
Cdc14a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm383116,273,336 - 116,274,106UniSTSGRCm38
MGSCv373115,976,254 - 115,977,024UniSTSGRCm37
Cytogenetic Map3G1UniSTS
cM Map3 UniSTS
UniSTS:234810  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm383116,273,743 - 116,273,942UniSTSGRCm38
MGSCv373115,976,661 - 115,976,860UniSTSGRCm37
Cytogenetic Map3G1UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001080818 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001173553 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001355646 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001378993 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001378994 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017319562 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030252597 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036163079 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036163080 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036163081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036163082 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004941316 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004941317 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC165364 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK032515 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK036556 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK043956 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK048250 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK050885 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK052560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK136546 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK142294 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC072644 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CAAA01028638 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CAAA01028650 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CAAA01028653 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CAAA01028659 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CAAA01028671 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CAAA01199151 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CAAA01199417 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CAAA01210733 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CAAA01216758 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000090464   ⟹   ENSMUSP00000087950
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3116,066,202 - 116,217,681 (-)Ensembl
GRCm38.p6 Ensembl3116,272,553 - 116,424,032 (-)Ensembl
RefSeq Acc Id: ENSMUST00000106491   ⟹   ENSMUSP00000102100
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3116,066,202 - 116,217,635 (-)Ensembl
GRCm38.p6 Ensembl3116,272,553 - 116,423,986 (-)Ensembl
RefSeq Acc Id: ENSMUST00000127704
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3116,119,688 - 116,217,681 (-)Ensembl
GRCm38.p6 Ensembl3116,326,039 - 116,424,032 (-)Ensembl
RefSeq Acc Id: ENSMUST00000136994
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3116,197,757 - 116,217,544 (-)Ensembl
GRCm38.p6 Ensembl3116,404,108 - 116,423,895 (-)Ensembl
RefSeq Acc Id: ENSMUST00000148857
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3116,193,835 - 116,216,673 (-)Ensembl
GRCm38.p6 Ensembl3116,400,186 - 116,423,024 (-)Ensembl
RefSeq Acc Id: ENSMUST00000197830   ⟹   ENSMUSP00000142479
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3116,115,859 - 116,216,298 (-)Ensembl
GRCm38.p6 Ensembl3116,322,210 - 116,422,649 (-)Ensembl
RefSeq Acc Id: ENSMUST00000199454
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3116,197,036 - 116,199,137 (-)Ensembl
GRCm38.p6 Ensembl3116,403,387 - 116,405,488 (-)Ensembl
RefSeq Acc Id: ENSMUST00000239145   ⟹   ENSMUSP00000159189
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3116,087,173 - 116,222,394 (-)Ensembl
GRCm38.p6 Ensembl3116,293,524 - 116,428,745 (-)Ensembl
RefSeq Acc Id: NM_001080818   ⟹   NP_001074287
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393116,066,202 - 116,217,681 (-)NCBI
GRCm383116,272,553 - 116,424,032 (-)NCBI
MGSCv373115,975,471 - 116,126,950 (-)RGD
Celera3122,716,884 - 122,851,142 (-)RGD
cM Map3 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001173553   ⟹   NP_001167024
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393116,066,202 - 116,217,681 (-)NCBI
GRCm383116,272,553 - 116,424,032 (-)NCBI
MGSCv373115,975,471 - 116,126,950 (-)RGD
Celera3122,716,884 - 122,851,142 (-)RGD
cM Map3 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001355646   ⟹   NP_001342575
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393116,066,202 - 116,147,893 (-)NCBI
GRCm383116,272,553 - 116,354,244 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001378993   ⟹   NP_001365922
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393116,087,172 - 116,217,721 (-)NCBI
GRCm383116,293,523 - 116,424,072 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001378994   ⟹   NP_001365923
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393116,087,172 - 116,222,390 (-)NCBI
GRCm383116,293,523 - 116,428,741 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017319562   ⟹   XP_017175051
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393116,087,177 - 116,151,442 (-)NCBI
GRCm383116,293,523 - 116,357,794 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030252597   ⟹   XP_030108457
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393116,087,177 - 116,217,714 (-)NCBI
GRCm383116,293,523 - 116,424,068 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036163079   ⟹   XP_036018972
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393116,087,172 - 116,217,719 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036163080   ⟹   XP_036018973
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393116,066,202 - 116,217,719 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036163081   ⟹   XP_036018974
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393116,087,177 - 116,217,714 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036163082   ⟹   XP_036018975
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393116,067,253 - 116,217,605 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004941316
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393116,066,202 - 116,217,724 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004941317
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393116,066,202 - 116,217,723 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_001074287   ⟸   NM_001080818
- Peptide Label: isoform 1
- UniProtKB: Q8BZ66 (UniProtKB/Swiss-Prot),   Q6GQT0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001167024   ⟸   NM_001173553
- Peptide Label: isoform 2
- UniProtKB: Q6GQT0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_017175051   ⟸   XM_017319562
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: NP_001342575   ⟸   NM_001355646
- Peptide Label: isoform 3
RefSeq Acc Id: XP_030108457   ⟸   XM_030252597
- Peptide Label: isoform X3
RefSeq Acc Id: NP_001365923   ⟸   NM_001378994
- Peptide Label: isoform 5
- UniProtKB: A0A5F8MPZ4 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001365922   ⟸   NM_001378993
- Peptide Label: isoform 4
RefSeq Acc Id: ENSMUSP00000087950   ⟸   ENSMUST00000090464
RefSeq Acc Id: ENSMUSP00000142479   ⟸   ENSMUST00000197830
RefSeq Acc Id: ENSMUSP00000159189   ⟸   ENSMUST00000239145
RefSeq Acc Id: ENSMUSP00000102100   ⟸   ENSMUST00000106491
RefSeq Acc Id: XP_036018973   ⟸   XM_036163080
- Peptide Label: isoform X2
RefSeq Acc Id: XP_036018975   ⟸   XM_036163082
- Peptide Label: isoform X4
RefSeq Acc Id: XP_036018972   ⟸   XM_036163079
- Peptide Label: isoform X1
RefSeq Acc Id: XP_036018974   ⟸   XM_036163081
- Peptide Label: isoform X3
Protein Domains
Tyrosine specific protein phosphatases   Tyrosine-protein phosphatase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6GQT0-F1-model_v2 AlphaFold Q6GQT0 1-603 view protein structure

Promoters
RGD ID:6833559
Promoter ID:MM_KWN:35887
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000090464,   ENSMUST00000106491,   OTTMUST00000072811,   OTTMUST00000072812,   OTTMUST00000072813
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv363116,126,741 - 116,127,947 (-)MPROMDB
RGD ID:6882200
Promoter ID:EPDNEW_M4536
Type:initiation region
Name:Cdc14a_1
Description:Mus musculus CDC14 cell division cycle 14A , transcript variant1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm383116,423,974 - 116,424,034EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2442676 AgrOrtholog
Ensembl Genes ENSMUSG00000033502 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000090464 ENTREZGENE
  ENSMUST00000090464.7 UniProtKB/Swiss-Prot
  ENSMUST00000106491 ENTREZGENE
  ENSMUST00000106491.7 UniProtKB/Swiss-Prot
  ENSMUST00000197830.5 UniProtKB/TrEMBL
  ENSMUST00000239145 ENTREZGENE
  ENSMUST00000239145.2 UniProtKB/TrEMBL
Gene3D-CATH 3.90.190.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro CDC14_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DSPn UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Dual-sp_phosphatase_cat-dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Prot-tyrosine_phosphatase-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Tyr_Pase_AS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Tyr_Pase_cat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TYR_PHOSPHATASE_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TYR_PHOSPHATASE_DUAL_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:229776 UniProtKB/Swiss-Prot
MGD MGI:2442676 ENTREZGENE
NCBI Gene 229776 ENTREZGENE
PANTHER PTHR23339:SF77 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam DSPc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DSPn UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Cdc14a PhenoGen
PROSITE TYR_PHOSPHATASE_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TYR_PHOSPHATASE_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TYR_PHOSPHATASE_DUAL UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART DSPc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTPc_motif UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF52799 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0G2JDS3_MOUSE UniProtKB/TrEMBL
  A0A5F8MPZ4 ENTREZGENE, UniProtKB/TrEMBL
  CC14A_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q8BZ66 ENTREZGENE
UniProt Secondary Q8BZ66 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-07-10 Cdc14a  CDC14 cell division cycle 14A  Cdc14a  CDC14 cell division cycle 14 homolog A (S. cerevisiae)  Symbol and/or name change 5135510 APPROVED