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Gene: Abhd16a (abhydrolase domain containing 16A, phospholipase) Rattus norvegicus

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Symbol:

Abhd16a

Name:

abhydrolase domain containing 16A, phospholipase

RGD ID:

1303164

Description:

Predicted to enable monoacylglycerol lipase activity and phospholipase activity. Predicted to be involved in monoacylglycerol catabolic process; phosphatidylserine catabolic process; and prostaglandin catabolic process. Predicted to be located in membrane. Human ortholog(s) of this gene implicated in hereditary spastic paraplegia 86. Orthologous to human ABHD16A (abhydrolase domain containing 16A, phospholipase); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-sulfonyldiphenol; amitrole.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

abhydrolase domain containing 16A; abhydrolase domain-containing protein 16A; alpha/beta hydrolase domain-containing protein 16A; Bat5; HLA-B associated transcript 5; HLA-B-associated transcript 5; HLA-B-associated transcript 5 homolog; monoacylglycerol lipase ABHD16A; NG26; phosphatidylserine lipase ABHD16A

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	20	3,723,756 - 3,738,617 (-)	NCBI		GRCr8
mRatBN7.2	20	3,719,089 - 3,733,952 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	20	3,719,091 - 3,733,927 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	20	4,418,104 - 4,433,262 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	20	3,780,160 - 3,795,318 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	20	4,318,217 - 4,333,175 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	20	5,080,070 - 5,094,935 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	20	5,080,070 - 5,094,935 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	20	7,153,000 - 7,168,193 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	20	3,782,759 - 3,797,620 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	20	3,782,984 - 3,797,821 (-)	NCBI
Celera	20	4,291,911 - 4,306,777 (+)	NCBI		Celera
Cytogenetic Map	20	p12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Abhd16a	Rat	genetic disease		ISO	RGD:1351609	8554872	ClinVar Annotator: match by term: Inborn genetic diseases	ClinVar
Abhd16a	Rat	hereditary spastic paraplegia		ISO	RGD:1351609	8554872	ClinVar Annotator: match by term: Autosomal recessive complex spastic paraplegia \| ClinVar Annotator: match by more ...	ClinVar	PMID:25741868
Abhd16a	Rat	hereditary spastic paraplegia 86		ISO	RGD:1351609	8554872	ClinVar Annotator: match by term: Spastic paraplegia 86, autosomal recessive	ClinVar	PMID:25741868\|PMID:34587489\|PMID:34866177
Abhd16a	Rat	megacolon		ISO	RGD:1351609	8554872	ClinVar Annotator: match by term: Megacolon	ClinVar	PMID:21681106
Abhd16a	Rat	Neurodevelopmental Disorders		ISO	RGD:1351609	8554872	ClinVar Annotator: match by term: Neurodevelopmental disorder	ClinVar	PMID:25741868
Abhd16a	Rat	paraplegia		ISO	RGD:1351609	8554872	ClinVar Annotator: match by term: Spastic paraplegia	ClinVar	PMID:25741868\|PMID:34587489
Abhd16a	Rat	proteasome-associated autoinflammatory syndrome 1		ISO	RGD:1351609	8554872	ClinVar Annotator: match by term: Proteasome-associated autoinflammatory syndrome 1	ClinVar	PMID:28492532

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Abhd16a	Rat	hereditary spastic paraplegia 86		ISO	RGD:1351609	7240710		OMIM

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Abhd16a	Rat	2,3,7,8-tetrachlorodibenzodioxine	decreases expression	ISO	RGD:1623843	6480464	Tetrachlorodibenzodioxin results in decreased expression of ABHD16A mRNA	CTD	PMID:19465110
Abhd16a	Rat	2,3,7,8-tetrachlorodibenzodioxine	increases expression	EXP		6480464	Tetrachlorodibenzodioxin results in increased expression of ABHD16A mRNA	CTD	PMID:32109520
Abhd16a	Rat	2,3,7,8-tetrachlorodibenzodioxine	affects expression	ISO	RGD:1623843	6480464	Tetrachlorodibenzodioxin affects the expression of ABHD16A mRNA	CTD	PMID:21570461
Abhd16a	Rat	4,4'-diaminodiphenylmethane	decreases expression	ISO	RGD:1623843	6480464	4,4'-diaminodiphenylmethane results in decreased expression of ABHD16A mRNA	CTD	PMID:18648102
Abhd16a	Rat	4,4'-sulfonyldiphenol	multiple interactions	EXP		6480464	[bisphenol A co-treated with bisphenol F co-treated with bisphenol S] results in increased expression of more ...	CTD	PMID:36041667
Abhd16a	Rat	acrolein	multiple interactions	ISO	RGD:1351609	6480464	[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in increased oxidation of more ...	CTD	PMID:32699268
Abhd16a	Rat	acrylamide	increases expression	ISO	RGD:1623843	6480464	Acrylamide results in increased expression of ABHD16A mRNA	CTD	PMID:30807115
Abhd16a	Rat	aflatoxin B1	increases methylation	ISO	RGD:1351609	6480464	Aflatoxin B1 results in increased methylation of ABHD16A exon	CTD	PMID:30157460
Abhd16a	Rat	alpha-pinene	multiple interactions	ISO	RGD:1351609	6480464	[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in increased oxidation of more ...	CTD	PMID:32699268
Abhd16a	Rat	amitrole	increases expression	EXP		6480464	Amitrole results in increased expression of ABHD16A mRNA	CTD	PMID:30047161
Abhd16a	Rat	antirheumatic drug	decreases expression	ISO	RGD:1351609	6480464	Antirheumatic Agents results in decreased expression of ABHD16A mRNA	CTD	PMID:24449571
Abhd16a	Rat	arsane	multiple interactions	ISO	RGD:1351609	6480464	[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ...	CTD	PMID:39836092
Abhd16a	Rat	arsenic atom	multiple interactions	ISO	RGD:1351609	6480464	[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ...	CTD	PMID:39836092
Abhd16a	Rat	bisphenol A	affects expression	EXP		6480464	bisphenol A affects the expression of ABHD16A mRNA	CTD	PMID:25181051
Abhd16a	Rat	bisphenol A	multiple interactions	EXP		6480464	[bisphenol A co-treated with bisphenol F co-treated with bisphenol S] results in increased expression of more ...	CTD	PMID:36041667
Abhd16a	Rat	bisphenol A	multiple interactions	ISO	RGD:1351609	6480464	[bisphenol A co-treated with Fulvestrant] results in decreased methylation of ABHD16A gene	CTD	PMID:31601247
Abhd16a	Rat	bisphenol A	decreases methylation	ISO	RGD:1351609	6480464	bisphenol A results in decreased methylation of ABHD16A gene	CTD	PMID:31601247
Abhd16a	Rat	bisphenol A	increases expression	EXP		6480464	bisphenol A results in increased expression of ABHD16A mRNA	CTD	PMID:34947998
Abhd16a	Rat	bisphenol F	multiple interactions	EXP		6480464	[bisphenol A co-treated with bisphenol F co-treated with bisphenol S] results in increased expression of more ...	CTD	PMID:36041667
Abhd16a	Rat	bortezomib	increases expression	ISO	RGD:1351609	6480464	Bortezomib results in increased expression of ABHD16A mRNA	CTD	PMID:20977926
Abhd16a	Rat	caffeine	decreases phosphorylation	ISO	RGD:1351609	6480464	Caffeine results in decreased phosphorylation of ABHD16A protein	CTD	PMID:35688186
Abhd16a	Rat	CGP 52608	multiple interactions	ISO	RGD:1351609	6480464	CGP 52608 promotes the reaction [RORA protein binds to ABHD16A gene]	CTD	PMID:28238834
Abhd16a	Rat	chlorpyrifos	increases expression	ISO	RGD:1623843	6480464	Chlorpyrifos results in increased expression of ABHD16A mRNA	CTD	PMID:37019170
Abhd16a	Rat	cisplatin	increases expression	ISO	RGD:1351609	6480464	Cisplatin results in increased expression of ABHD16A mRNA	CTD	PMID:27594783
Abhd16a	Rat	coumestrol	decreases expression	ISO	RGD:1351609	6480464	Coumestrol results in decreased expression of ABHD16A mRNA	CTD	PMID:19167446
Abhd16a	Rat	Dibutyl phosphate	affects expression	ISO	RGD:1351609	6480464	di-n-butylphosphoric acid affects the expression of ABHD16A mRNA	CTD	PMID:37042841
Abhd16a	Rat	doxorubicin	increases expression	ISO	RGD:1351609	6480464	Doxorubicin results in increased expression of ABHD16A mRNA	CTD	PMID:29803840
Abhd16a	Rat	ethanol	affects expression	ISO	RGD:1623843	6480464	Ethanol affects the expression of ABHD16A mRNA	CTD	PMID:30319688
Abhd16a	Rat	ethanol	affects splicing	ISO	RGD:1623843	6480464	Ethanol affects the splicing of ABHD16A mRNA	CTD	PMID:30319688
Abhd16a	Rat	finasteride	increases expression	EXP		6480464	Finasteride results in increased expression of ABHD16A mRNA	CTD	PMID:24136188
Abhd16a	Rat	fulvestrant	multiple interactions	ISO	RGD:1351609	6480464	[bisphenol A co-treated with Fulvestrant] results in decreased methylation of ABHD16A gene	CTD	PMID:31601247
Abhd16a	Rat	fulvestrant	increases methylation	ISO	RGD:1351609	6480464	Fulvestrant results in increased methylation of ABHD16A gene	CTD	PMID:31601247
Abhd16a	Rat	glyphosate	increases methylation	EXP		6480464	Glyphosate results in increased methylation of ABHD16A gene	CTD	PMID:31011160
Abhd16a	Rat	hypochlorous acid	decreases expression	ISO	RGD:1623843	6480464	Hypochlorous Acid results in decreased expression of ABHD16A mRNA	CTD	PMID:19376150
Abhd16a	Rat	ivermectin	decreases expression	ISO	RGD:1351609	6480464	Ivermectin results in decreased expression of ABHD16A protein	CTD	PMID:32959892
Abhd16a	Rat	ketamine	increases expression	EXP		6480464	Ketamine results in increased expression of ABHD16A mRNA	CTD	PMID:20080153
Abhd16a	Rat	manganese atom	multiple interactions	ISO	RGD:1351609	6480464	[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ...	CTD	PMID:39836092
Abhd16a	Rat	manganese(0)	multiple interactions	ISO	RGD:1351609	6480464	[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ...	CTD	PMID:39836092
Abhd16a	Rat	manganese(II) chloride	multiple interactions	ISO	RGD:1351609	6480464	[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ...	CTD	PMID:39836092
Abhd16a	Rat	methimazole	increases expression	EXP		6480464	Methimazole results in increased expression of ABHD16A mRNA	CTD	PMID:30047161
Abhd16a	Rat	orlistat	decreases activity	ISO	RGD:1351609	6480464	orlistat results in decreased activity of ABHD16A protein	CTD	PMID:18657971
Abhd16a	Rat	ozone	multiple interactions	ISO	RGD:1351609	6480464	[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in increased oxidation of more ...	CTD	PMID:32699268
Abhd16a	Rat	ozone	multiple interactions	ISO	RGD:1623843	6480464	[Air Pollutants results in increased abundance of [Ozone co-treated with Soot]] which results in decreased more ...	CTD	PMID:34911549
Abhd16a	Rat	ozone	decreases expression	EXP		6480464	Ozone results in decreased expression of ABHD16A protein	CTD	PMID:33146391
Abhd16a	Rat	paracetamol	decreases expression	ISO	RGD:1351609	6480464	Acetaminophen results in decreased expression of ABHD16A mRNA	CTD	PMID:21420995
Abhd16a	Rat	perfluorohexanesulfonic acid	decreases expression	ISO	RGD:1623843	6480464	perfluorohexanesulfonic acid results in decreased expression of ABHD16A mRNA	CTD	PMID:37995155
Abhd16a	Rat	pirinixic acid	multiple interactions	ISO	RGD:1623843	6480464	[pirinixic acid binds to and results in increased activity of PPARA protein] which results in more ...	CTD	PMID:19710929
Abhd16a	Rat	pirinixic acid	increases expression	EXP		6480464	pirinixic acid results in increased expression of ABHD16A mRNA	CTD	PMID:22484513
Abhd16a	Rat	propiconazole	increases expression	EXP		6480464	propiconazole results in increased expression of ABHD16A mRNA	CTD	PMID:30047161
Abhd16a	Rat	sodium arsenite	multiple interactions	ISO	RGD:1351609	6480464	[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ...	CTD	PMID:39836092
Abhd16a	Rat	sodium fluoride	decreases expression	ISO	RGD:1623843	6480464	Sodium Fluoride results in decreased expression of ABHD16A protein	CTD	PMID:28918527
Abhd16a	Rat	sulindac	increases expression	EXP		6480464	Sulindac results in increased expression of ABHD16A mRNA	CTD	PMID:24136188
Abhd16a	Rat	temozolomide	increases expression	ISO	RGD:1351609	6480464	Temozolomide results in increased expression of ABHD16A mRNA	CTD	PMID:31758290
Abhd16a	Rat	thapsigargin	increases expression	EXP		6480464	Thapsigargin results in increased expression of ABHD16A protein	CTD	PMID:35544339
Abhd16a	Rat	titanium dioxide	increases expression	ISO	RGD:1623843	6480464	titanium dioxide results in increased expression of ABHD16A mRNA	CTD	PMID:29264374
Abhd16a	Rat	titanium dioxide	increases methylation	ISO	RGD:1623843	6480464	titanium dioxide results in increased methylation of ABHD16A gene	CTD	PMID:35295148
Abhd16a	Rat	triphenyl phosphate	affects expression	ISO	RGD:1351609	6480464	triphenyl phosphate affects the expression of ABHD16A mRNA	CTD	PMID:37042841
Abhd16a	Rat	valproic acid	affects expression	ISO	RGD:1351609	6480464	Valproic Acid affects the expression of ABHD16A mRNA	CTD	PMID:25979313
Abhd16a	Rat	valproic acid	decreases expression	ISO	RGD:1351609	6480464	Valproic Acid results in decreased expression of ABHD16A mRNA	CTD	PMID:29154799
Abhd16a	Rat	vinclozolin	decreases methylation	EXP		6480464	vinclozolin results in decreased methylation of ABHD16A gene	CTD	PMID:31079544

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Abhd16a	Rat	lipid metabolic process	involved_in	IEA	UniProtKB-KW:KW-0443	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Abhd16a	Rat	monoacylglycerol catabolic process	involved_in	IEA	UniProtKB:Q9Z1Q2\|ensembl:ENSMUSP00000007251	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Abhd16a	Rat	monoacylglycerol catabolic process	involved_in	ISO	RGD:1623843	1624291	PMID:25290914	RGD	PMID:25290914
Abhd16a	Rat	monoacylglycerol catabolic process	involved_in	IBA	MGI:99476\|PANTHER:PTN002284502\|UniProtKB:O95870	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Abhd16a	Rat	monoacylglycerol catabolic process	involved_in	ISO	RGD:1351609	1624291	PMID:25290914	RGD	PMID:25290914
Abhd16a	Rat	monoacylglycerol catabolic process	involved_in	IEA	UniProtKB:O95870\|ensembl:ENSP00000379282	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Abhd16a	Rat	monoacylglycerol catabolic process	involved_in	ISS	UniProtKB:O95870	1600115	GO_REF:0000024	UniProt	GO_REF:0000024
Abhd16a	Rat	phosphatidylserine catabolic process	involved_in	ISO	RGD:1623843	1624291	PMID:25580854	RGD	PMID:25580854
Abhd16a	Rat	phosphatidylserine catabolic process	involved_in	IBA	MGI:99476\|PANTHER:PTN002284502	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Abhd16a	Rat	phosphatidylserine catabolic process	involved_in	ISS	UniProtKB:Q9Z1Q2	1600115	GO_REF:0000024	UniProt	GO_REF:0000024
Abhd16a	Rat	phosphatidylserine catabolic process	involved_in	IEA	UniProtKB:Q9Z1Q2\|ensembl:ENSMUSP00000007251	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Abhd16a	Rat	prostaglandin catabolic process	involved_in	IEA	UniProtKB:Q9Z1Q2\|ensembl:ENSMUSP00000007251	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Abhd16a	Rat	prostaglandin catabolic process	involved_in	ISO	RGD:1623843	1624291	PMID:25290914	RGD	PMID:25290914
Abhd16a	Rat	prostaglandin catabolic process	involved_in	IEA	UniProtKB:O95870\|ensembl:ENSP00000379282	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Abhd16a	Rat	prostaglandin catabolic process	involved_in	ISO	RGD:1351609	1624291	PMID:25290914	RGD	PMID:25290914

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Abhd16a	Rat	membrane	located_in	IEA	UniProtKB-SubCell:SL-0162	1600115	GO_REF:0000044	UniProt	GO_REF:0000044
Abhd16a	Rat	membrane	located_in	IEA	UniProtKB-KW:KW-0472	1600115	GO_REF:0000043	UniProt	GO_REF:0000043

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Abhd16a	Rat	hydrolase activity	enables	IEA	UniProtKB-KW:KW-0378	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Abhd16a	Rat	lysophospholipase activity	NOT\|enables	ISO	RGD:1351609	1624291	PMID:25290914	RGD	PMID:25290914
Abhd16a	Rat	monoacylglycerol lipase activity	enables	ISS	UniProtKB:O95870	1600115	GO_REF:0000024	UniProt	GO_REF:0000024
Abhd16a	Rat	monoacylglycerol lipase activity	enables	IEA	UniProtKB:O95870\|ensembl:ENSP00000379282	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Abhd16a	Rat	monoacylglycerol lipase activity	enables	IBA	MGI:99476\|PANTHER:PTN002284502\|UniProtKB:O95870	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Abhd16a	Rat	monoacylglycerol lipase activity	enables	ISO	RGD:1623843	1624291	PMID:25290914	RGD	PMID:25290914
Abhd16a	Rat	monoacylglycerol lipase activity	enables	IEA	UniProtKB:Q9Z1Q2\|ensembl:ENSMUSP00000007251	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Abhd16a	Rat	monoacylglycerol lipase activity	enables	ISO	RGD:1351609	1624291	PMID:25290914	RGD	PMID:25290914
Abhd16a	Rat	monoacylglycerol lipase activity	enables	IEA	EC:3.1.1.23	1600115	GO_REF:0000003	UniProt	GO_REF:0000003
Abhd16a	Rat	phospholipase activity	enables	IEA	UniProtKB:Q9Z1Q2\|ensembl:ENSMUSP00000007251	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Abhd16a	Rat	phospholipase activity	enables	IBA	MGI:99476\|PANTHER:PTN002284502	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Abhd16a	Rat	phospholipase activity	enables	ISO	RGD:1623843	1624291	PMID:25580854	RGD	PMID:25580854
Abhd16a	Rat	phospholipase activity	enables	ISS	UniProtKB:Q9Z1Q2	1600115	GO_REF:0000024	UniProt	GO_REF:0000024
Abhd16a	Rat	protein binding	enables	ISO	RGD:1351609	1624291	UniProtKB:O60636\|UniProtKB:O60831\|UniProtKB:O75396\|UniProtKB:O75783\|UniProtKB:O75920\|UniProtKB:O95183\|UniProtKB:O95415\|UniProtKB:P01374\|UniProtKB:P04921\|UniProtKB:P05177\|UniProtKB:P0DTC6\|UniProtKB:P11215\|UniProtKB:P14324\|UniProtKB:P18859\|UniProtKB:P36382\|UniProtKB:P61266\|UniProtKB:Q01628\|UniProtKB:Q07864\|UniProtKB:Q13520\|UniProtKB:Q14973\|UniProtKB:Q15125\|UniProtKB:Q3ZAQ7\|UniProtKB:Q5T7V8\|UniProtKB:Q6NTF9-3\|UniProtKB:Q6P5T0\|UniProtKB:Q6PI78\|UniProtKB:Q6ZVE7\|UniProtKB:Q7Z5P4\|UniProtKB:Q86UW9\|UniProtKB:Q86VR2\|UniProtKB:Q86WB7-2\|UniProtKB:Q8IV31\|UniProtKB:Q8N350-4\|UniProtKB:Q8TB36\|UniProtKB:Q8TDT2\|UniProtKB:Q96AN5\|UniProtKB:Q96DZ7\|UniProtKB:Q96FX8\|UniProtKB:Q96Q45-2\|UniProtKB:Q99640-2\|UniProtKB:Q99942\|UniProtKB:Q9BRI3\|UniProtKB:Q9BVK8\|UniProtKB:Q9H169-2\|UniProtKB:Q9NPE6\|UniProtKB:Q9NRZ7\|UniProtKB:Q9NUH8\|UniProtKB:Q9NX94\|UniProtKB:Q9UHD4\|UniProtKB:Q9UHI5\|UniProtKB:Q9Y282\|UniProtKB:Q9Y680 PMID:14667819, PMID:25416956, PMID:29892012, PMID:31515488, PMID:32296183, PMID:36217029	RGD	PMID:14667819\|PMID:25416956\|PMID:29892012\|PMID:31515488\|PMID:32296183\|PMID:36217029

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	MHC-linked diabetogenic gene of the NOD mouse: molecular mapping of the 3' boundary of the diabetogenic region.	Ikegami H, etal., Biochem Biophys Res Commun 1993 Apr 30;192(2):677-82.
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

PMID:12477932	PMID:25290914	PMID:25580854

Abhd16a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	20	3,723,756 - 3,738,617 (-)	NCBI		GRCr8
mRatBN7.2	20	3,719,089 - 3,733,952 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	20	3,719,091 - 3,733,927 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	20	4,418,104 - 4,433,262 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	20	3,780,160 - 3,795,318 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	20	4,318,217 - 4,333,175 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	20	5,080,070 - 5,094,935 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	20	5,080,070 - 5,094,935 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	20	7,153,000 - 7,168,193 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	20	3,782,759 - 3,797,620 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	20	3,782,984 - 3,797,821 (-)	NCBI
Celera	20	4,291,911 - 4,306,777 (+)	NCBI		Celera
Cytogenetic Map	20	p12	NCBI

ABHD16A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	31,686,955 - 31,703,324 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	31,686,955 - 31,703,356 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	6	31,654,732 - 31,671,101 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	31,762,715 - 31,779,067 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	6	31,762,714 - 31,779,067	NCBI
Celera	6	33,252,945 - 33,269,362 (-)	NCBI		Celera
Cytogenetic Map	6	p21.33	NCBI
HuRef	6	31,440,951 - 31,457,370 (-)	NCBI		HuRef
CHM1_1	6	31,656,862 - 31,673,273 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	6	31,539,989 - 31,556,359 (-)	NCBI		T2T-CHM13v2.0

Abhd16a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	35,308,210 - 35,321,963 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	35,308,239 - 35,321,963 (+)	Ensembl		GRCm39 Ensembl
GRCm38	17	35,089,234 - 35,102,987 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	35,089,263 - 35,102,987 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	17	35,226,236 - 35,239,932 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	17	34,697,347 - 34,711,043 (+)	NCBI		MGSCv36	mm8
Celera	17	38,185,979 - 38,199,670 (+)	NCBI		Celera
Cytogenetic Map	17	B1	NCBI
cM Map	17	18.59	NCBI

Abhd16a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955437	227,407 - 241,830 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955437	227,407 - 241,702 (-)	NCBI	ChiLan1.0	ChiLan1.0

ABHD16A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	46,164,503 - 46,180,725 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	42,126,016 - 42,142,219 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	31,348,640 - 31,364,777 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	32,238,872 - 32,253,856 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	32,238,872 - 32,253,856 (-)	Ensembl	panpan1.1		panPan2

ABHD16A
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	12	1,167,723 - 1,182,520 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	12	1,167,721 - 1,182,453 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	12	1,304,284 - 1,319,089 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	12	1,313,091 - 1,327,889 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	12	1,313,089 - 1,328,210 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	12	1,172,393 - 1,187,217 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	12	1,239,568 - 1,254,388 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	12	1,306,774 - 1,321,843 (-)	NCBI		UU_Cfam_GSD_1.0

Abhd16a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	35,716,402 - 35,732,375 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936727	1,828,905 - 1,844,967 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936727	1,828,966 - 1,843,334 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ABHD16A
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	23,800,932 - 23,814,947 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	23,800,932 - 23,814,920 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	27,448,853 - 27,451,015 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ABHD16A
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	17	40,320,749 - 40,336,922 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	17	40,320,878 - 40,336,720 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666044	31,598,745 - 31,614,930 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Abhd16a
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624754	24,505,606 - 24,520,092 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624754	24,505,572 - 24,520,092 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in Abhd16a
225 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	28
Count of miRNA genes:	27
Interacting mature miRNAs:	28
Transcripts:	ENSRNOT00000001121
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
61472	Aia1	Adjuvant induced arthritis QTL 1	18	0.001	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	20	2646395	4597031	Rat
2306850	Pia40	Pristane induced arthritis QTL 40		0.0001	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	20	1527959	5304575	Rat
1641915	Colcr9	Colorectal carcinoma resistance QTL 9	2.97	0.0024	intestine integrity trait (VT:0010554)	benign colorectal tumor number (CMO:0001795)	20	1530655	46530655	Rat
2317057	Aia27	Adjuvant induced arthritis QTL 27	2.83		joint integrity trait (VT:0010548)	right rear ankle joint diameter (CMO:0002150)	20	2892597	26381954	Rat
7387283	Uae44	Urinary albumin excretion QTL 44		0.1712	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	20	1	26123605	Rat
7411668	Foco32	Food consumption QTL 32	8	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	20	1	36600972	Rat
2305926	Iddm37	Insulin dependent diabetes mellitus QTL 37	6		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	20	1527842	46527842	Rat
1354642	Despr15	Despair related QTL 15		0.0027	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	20	1	24159021	Rat
1600382	Edcs3	Endometrial carcinoma susceptibility QTL3	3.5	0.003	uterus morphology trait (VT:0001120)	percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)	20	1	25159026	Rat
61448	Ciaa1	CIA Autoantibody QTL 1	30	0.001	blood autoantibody amount (VT:0003725)	calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)	20	2646395	4597031	Rat
1331772	Cdexp2	CD45RC expression in CD8 T cells QTL 2	5.7		CD8-positive T cell quantity (VT:0008077)	blood CD45RC(high) CD8 T cell count to CD45RC(low) CD8 T cell count ratio (CMO:0001990)	20	3621649	10078919	Rat
8694189	Bw153	Body weight QTL 153	3.13	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	20	1	29191651	Rat
1300152	Bp195	Blood pressure QTL 195	3.46		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	20	3621649	9243559	Rat
9590109	Sffal8	Serum free fatty acids level QTL 8	5.32	0.01	blood free fatty acid amount (VT:0001553)	plasma free fatty acids level (CMO:0000546)	20	1	29191651	Rat
9590275	Scort15	Serum corticosterone level QTL 15	3.48	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	20	1	29191651	Rat
9589155	Insul32	Insulin level QTL 32	6.38	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	20	1	29191651	Rat
7411650	Foco23	Food consumption QTL 23	20.7	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	20	1	29191651	Rat
2317851	Alcrsp22	Alcohol response QTL 22	3.2	0.05	response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	20	1	27339237	Rat
1598816	Memor12	Memory QTL 12	2.4		exploratory behavior trait (VT:0010471)	average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)	20	2606836	47606836	Rat
61432	Cia1	Collagen induced arthritis QTL 1			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	20	3621656	14101050	Rat
1641893	Alcrsp7	Alcohol response QTL 7			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	20	1	27339237	Rat
6893685	Bw111	Body weight QTL 111	2.7	0.004	body mass (VT:0001259)	body weight (CMO:0000012)	20	1	32578807	Rat
9590252	Scort12	Serum corticosterone level QTL 12	20.46	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	20	1	36600972	Rat
737973	Pia21	Pristane induced arthritis QTL 21	4.8		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	20	3621656	4606812	Rat

D20Yum51

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	20	3,738,742 - 3,738,964 (+)	Marker Load Pipeline
mRatBN7.2	20	3,734,077 - 3,734,302 (-)	MAPPER	mRatBN7.2
Rnor_6.0	20	5,079,724 - 5,079,944	NCBI	Rnor6.0
Rnor_5.0	20	7,152,654 - 7,152,874	UniSTS	Rnor5.0
RGSC_v3.4	20	3,797,746 - 3,797,966	UniSTS	RGSC3.4
Celera	20	4,291,547 - 4,291,785	UniSTS
Cytogenetic Map	20	p12	UniSTS

AI326074

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	20	3,719,539 - 3,719,746 (-)	MAPPER	mRatBN7.2
Rnor_6.0	20	5,094,278 - 5,094,484	NCBI	Rnor6.0
Rnor_5.0	20	7,167,536 - 7,167,742	UniSTS	Rnor5.0
Celera	20	4,306,120 - 4,306,326	UniSTS
Cytogenetic Map	20	p12	UniSTS

RH138896

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	20	3,727,525 - 3,727,645 (-)	MAPPER	mRatBN7.2
Rnor_6.0	20	5,086,381 - 5,086,500	NCBI	Rnor6.0
Rnor_5.0	20	7,159,639 - 7,159,758	UniSTS	Rnor5.0
RGSC_v3.4	20	3,791,194 - 3,791,313	UniSTS	RGSC3.4
Celera	20	4,298,222 - 4,298,341	UniSTS
RH 3.4 Map	20	52.52	UniSTS
Cytogenetic Map	20	p12	UniSTS

RH133704

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	20	3,723,797 - 3,724,058 (+)	Marker Load Pipeline
mRatBN7.2	20	3,719,130 - 3,719,391 (-)	MAPPER	mRatBN7.2
Rnor_6.0	20	5,094,633 - 5,094,893	NCBI	Rnor6.0
Rnor_5.0	20	7,167,891 - 7,168,151	UniSTS	Rnor5.0
RGSC_v3.4	20	3,782,801 - 3,783,061	UniSTS	RGSC3.4
Celera	20	4,306,475 - 4,306,735	UniSTS
RH 3.4 Map	20	53.02	UniSTS
Cytogenetic Map	20	p12	UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31


RefSeq Transcripts	NM_212531	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039098802	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063279208	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010060714	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010060715	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC094348	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC091227	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BX883045	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474121	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CK653480	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000077082 ⟹ ENSRNOP00000071617

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	20	3,719,091 - 3,733,927 (-)	Ensembl
Rnor_6.0 Ensembl	20	5,080,166 - 5,094,710 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000078576 ⟹ ENSRNOP00000071276

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	20	5,094,468 - 5,094,935 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000079886

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	20	5,093,478 - 5,094,737 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000081760 ⟹ ENSRNOP00000070241

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	20	5,080,139 - 5,082,430 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000083284 ⟹ ENSRNOP00000073114

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	20	3,719,091 - 3,733,879 (-)	Ensembl
Rnor_6.0 Ensembl	20	5,085,712 - 5,094,935 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000083411 ⟹ ENSRNOP00000068595

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	20	5,087,627 - 5,093,810 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000085611 ⟹ ENSRNOP00000069494

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	20	5,090,501 - 5,093,426 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000086950 ⟹ ENSRNOP00000072329

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	20	5,080,070 - 5,082,430 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000089490

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	20	5,090,781 - 5,094,185 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000091738

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	20	5,080,127 - 5,081,691 (+)	Ensembl

RefSeq Acc Id:

NM_212531 ⟹ NP_997696

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	3,723,756 - 3,738,617 (-)	NCBI
mRatBN7.2	20	3,719,089 - 3,733,952 (-)	NCBI
Rnor_6.0	20	5,080,070 - 5,094,935 (+)	NCBI
Rnor_5.0	20	7,153,000 - 7,168,193 (+)	NCBI
RGSC_v3.4	20	3,782,759 - 3,797,620 (-)	RGD
Celera	20	4,291,911 - 4,306,777 (+)	RGD

Sequence:

show sequence

TGCTGACGTCACGCACGCACGCACGCAGCGCCCAGGAGGCTACGGGCGGGGCCGGCGGGGACCTGAGGCCGAGGGACAGCGGCCCGAGCCGGGGCTATGGCGAAGCTGCTGAGCTGCGTCCTAGGCCC
CCGGCTCTACAAGATCTACCGGGAGAGGGACACGGACCGGGCCGCGACCAGCGTCCCCGAGACTCCCACTGCCGTCCCCGCCGCCTCGTCCAGCTCCTGGGATTCGTATTATCAGCCTCGGGCCTTGG
AGAAACATGCCGACAGCATCCTGGCACTGGCCTCAGTCTTCTGGTCCATCTCTTATTACTCCTCTCCCTTCGCCTTCTTCTACCTGTACAGGAAAGGTTACTTGAGTTTGTCCAAAGTGGTGCCGTTT
TCTCACTATGCCGGGACCTTGCTGGTACTCCTGGCAGGGGTGGCCTGCCTCCGAGGCATCGGCCGCTGGACCAACCCCCAGTACCGACAGTTCATCACCATCTTGGAAGCCACACATAGGAACCAGTC
TGCGGAAAACAAGAGACAGCTGGCCAACTATAACTTTGACTTCAGGAGCTGGCCCGTCGACTTCCACTGGGAGGAGCCCAGCAGCCGGAAGGGGTCCCGAGGTGGCCCTTCCCGCAGGGGTGTGGCCC
TGCTTCGCCCAGAGCCTCTGCACCGGGGAACAGCAGACACATTTCTTAACAGAGTCAAGAAGCTGCCCTGTCAAATCACCAGCTATCTGGTGGCACACACCTTGGGGCGCCGGATGCTGTACCCAGGC
TCCGTGTACCTGCTCCAGAAGGCCCTCATGCCTGTGCTGCTACAGGGCCAGGCCCGACTGGTGGAAGAGTGTAATGGGCGCCGTGCAAAACTGCTCGCCTGTGACGGCAATGAGATTGACACCATGTT
TGTGGACCGGCGGGGGACTGCTGAGCCCCAGGGGCAGAAGCTGGTGATCTGCTGTGAGGGGAATGCGGGATTCTACGAAGTGGGCTGTGTCTCCACACCCCTAGAAGCTGGATATTCTGTCCTGGGCT
GGAATCATCCAGGCTTTGCTGGGAGCACGGGGGTACCATTCCCACAGAATGAGGCCAATGCCATGGATGTGGTGGTTCAGTTTGCCATCCACCGCCTGGGCTTCCAGCCCCAGGACATTGTCATCTAC
GCCTGGTCCATTGGAGGCTTCACTGCCACGTGGGCAGCCATGTCCTACCCAGACATTAGTGCTGTTATCCTGGATGCCTCCTTCGACGACTTGGTGCCCTTGGCCTTGAAGGTCATGCCGGATAGCTG
GCGAGCCCTGGTGACCAGGACAGTGAGGCAGCACCTCAACCTCAACAACGCGGAGCAGCTGTGCAGGTTCCAGGGCCCTGTGCTGCTGGTCCGGAGAACCAAGGATGAGATCATCACCACCACGGTTC
CTGAGGACATCATGTCCAACAGAGGCAATGACCTCCTGCTGAAGCTCCTGCAGTTCCGGTACCCTCGAGTGATGACAGAGGAGGGGCTCAGAGCTGTGAGGCAGTGGCTGGAGGCCTCCTCCCAGCTA
GAGGAAGCCTCCATTTATAGTCGCTGGGAGGTGGATGAGGACTGGTGTGTGTCTGTGCTTCGCTCCTACCAGGCAGAGCATGGGCCTGATTTCCCCTGGAGTGTGGGGGAAGACATGAGTGTAGATGG
ACGGAGGCAACTGGCGCTGTTTCTGGCTCGGAAGCATCTGCACAACTTTGAGGCCACACACTGCACTCCACTCCCAGCCCAGCACTTCCAGATGCCCTGGTGCCTCTAGGCACCACATAGACTCCTCT
GGAAGGACAAGATGGGAGGAGACACGAGGGGGCTACTTTGTGACTCTCTTGATGTTGCTGTCTATAGTCTGGACAGTGGGGACATCCCCTCTGGCCACCTTCCTCCTGCACGTTTCCTCATCTACATG
GAAGCTCTCAGCTCCCCATACACACCTGCATTGAATGAGTGATTTATTCCTAATGTTAATAAAAAGGTATTTTTTCTAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_039098802 ⟹ XP_038954730

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	3,723,756 - 3,738,607 (-)	NCBI
mRatBN7.2	20	3,719,089 - 3,733,830 (-)	NCBI

RefSeq Acc Id:

XM_063279208 ⟹ XP_063135278

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	3,725,752 - 3,738,612 (-)	NCBI

RefSeq Acc Id:

XR_010060714

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	3,724,720 - 3,738,612 (-)	NCBI

RefSeq Acc Id:

XR_010060715

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	3,726,050 - 3,738,612 (-)	NCBI


Protein RefSeqs	NP_997696	(Get FASTA)	NCBI Sequence Viewer
	XP_038954730	(Get FASTA)	NCBI Sequence Viewer
	XP_063135278	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH91227	(Get FASTA)	NCBI Sequence Viewer
	CAE83991	(Get FASTA)	NCBI Sequence Viewer
	EDL83511	(Get FASTA)	NCBI Sequence Viewer
	EDL83512	(Get FASTA)	NCBI Sequence Viewer
	EDL83513	(Get FASTA)	NCBI Sequence Viewer
	EDL83514	(Get FASTA)	NCBI Sequence Viewer
	EDL83515	(Get FASTA)	NCBI Sequence Viewer
	EDL83516	(Get FASTA)	NCBI Sequence Viewer
	EDL83517	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000071617
	ENSRNOP00000098134
GenBank Protein	Q6MG55	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_997696 ⟸ NM_212531

- UniProtKB:

Q6MG55 (UniProtKB/Swiss-Prot), A6KTT1 (UniProtKB/TrEMBL), A0A0G2K4N8 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAKLLSCVLGPRLYKIYRERDTDRAATSVPETPTAVPAASSSSWDSYYQPRALEKHADSILALASVFWSISYYSSPFAFFYLYRKGYLSLSKVVPFSHYAGTLLVLLAGVACLRGIGRWTNPQYRQFI
TILEATHRNQSAENKRQLANYNFDFRSWPVDFHWEEPSSRKGSRGGPSRRGVALLRPEPLHRGTADTFLNRVKKLPCQITSYLVAHTLGRRMLYPGSVYLLQKALMPVLLQGQARLVEECNGRRAKLL
ACDGNEIDTMFVDRRGTAEPQGQKLVICCEGNAGFYEVGCVSTPLEAGYSVLGWNHPGFAGSTGVPFPQNEANAMDVVVQFAIHRLGFQPQDIVIYAWSIGGFTATWAAMSYPDISAVILDASFDDLV
PLALKVMPDSWRALVTRTVRQHLNLNNAEQLCRFQGPVLLVRRTKDEIITTTVPEDIMSNRGNDLLLKLLQFRYPRVMTEEGLRAVRQWLEASSQLEEASIYSRWEVDEDWCVSVLRSYQAEHGPDFP
WSVGEDMSVDGRRQLALFLARKHLHNFEATHCTPLPAQHFQMPWCL

hide sequence

Ensembl Acc Id:

ENSRNOP00000071617 ⟸ ENSRNOT00000077082

Ensembl Acc Id:

ENSRNOP00000069494 ⟸ ENSRNOT00000085611

Ensembl Acc Id:

ENSRNOP00000070241 ⟸ ENSRNOT00000081760

Ensembl Acc Id:

ENSRNOP00000071276 ⟸ ENSRNOT00000078576

Protein Domains

AB hydrolase-1 Phosphatidylserine Lipase ABHD16 N-terminal

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q6MG55-F1-model_v2	AlphaFold	Q6MG55	1-558	view protein structure

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

RGD ID:

13701395

Promoter ID:

EPDNEW_R11913

Type:

initiation region

Name:

Abhd16a_1

Description:

abhydrolase domain containing 16A

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	20	5,080,134 - 5,080,194	EPDNEW

Database	Acc Id	Source(s)
BioCyc Gene	G2FUF-4643	BioCyc
Ensembl Genes	ENSRNOG00000056637	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000077082	ENTREZGENE
	ENSRNOT00000120470	ENTREZGENE
Gene3D-CATH	3.40.50.1820	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7317323	IMAGE-MGC_LOAD
InterPro	AB_hydrolase	UniProtKB/Swiss-Prot
	AB_hydrolase_1	UniProtKB/Swiss-Prot
	ABHD16_N	UniProtKB/Swiss-Prot
KEGG Report	rno:361796	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:108968	IMAGE-MGC_LOAD
NCBI Gene	361796	ENTREZGENE
PANTHER	ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN	UniProtKB/Swiss-Prot
	PTHR12277:SF54	UniProtKB/Swiss-Prot
Pfam	ABHD16_N	UniProtKB/Swiss-Prot
	Abhydrolase_1	UniProtKB/Swiss-Prot
PhenoGen	Abhd16a	PhenoGen
RatGTEx	ENSRNOG00000056637	RatGTEx
Superfamily-SCOP	SSF53474	UniProtKB/Swiss-Prot
UniProt	A0A0G2K0X5	ENTREZGENE, UniProtKB/TrEMBL
	A0A0G2K4N8	ENTREZGENE, UniProtKB/TrEMBL
	A6KTT1	ENTREZGENE, UniProtKB/TrEMBL
	A6KTT5	ENTREZGENE, UniProtKB/TrEMBL
	ABHGA_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2020-02-13	Abhd16a	abhydrolase domain containing 16A, phospholipase	Abhd16a	abhydrolase domain containing 16A	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2011-07-28	Abhd16a	abhydrolase domain containing 16A	Bat5	HLA-B associated transcript 5	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-11-17	Bat5	HLA-B associated transcript 5			Symbol and Name status set to approved	1299863	APPROVED
2005-07-14	Bat5	HLA-B associated transcript 5			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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