Sptan1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024404947 | 196,302,505 - 196,374,135 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936487 | 16,070,996 - 16,142,662 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936487 | 16,071,043 - 16,142,662 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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SPTAN1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 9 | 128,552,587 - 128,633,662 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 9 | 128,552,558 - 128,633,662 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 9 | 131,314,866 - 131,395,941 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 9 | 130,354,687 - 130,435,762 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 9 | 128,394,439 - 128,475,426 | NCBI | | | | | Celera | 9 | 101,965,660 - 102,046,740 (+) | NCBI | | Celera | | | Cytogenetic Map | 9 | q34.11 | NCBI | | | | | HuRef | 9 | 100,926,750 - 101,007,765 (+) | NCBI | | HuRef | | | CHM1_1 | 9 | 131,465,810 - 131,546,871 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 9 | 140,759,427 - 140,840,530 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Sptan1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 2 | 29,855,572 - 29,921,463 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 29,855,572 - 29,921,463 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 2 | 29,965,560 - 30,031,451 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 29,965,560 - 30,031,451 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 2 | 29,821,080 - 29,886,971 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 29,787,569 - 29,853,460 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 29,669,500 - 29,735,203 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | B | NCBI | | | | | cM Map | 2 | 20.93 | NCBI | | | | |
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Sptan1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 3 | 33,639,020 - 33,703,890 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 13,241,164 - 13,306,047 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 13,241,217 - 13,306,046 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 3 | 16,315,861 - 16,380,393 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 3 | 24,900,818 - 24,965,352 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 3 | 23,151,547 - 23,216,077 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 3 | 8,534,437 - 8,599,259 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 8,534,440 - 8,599,260 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 13,878,433 - 13,950,970 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 3 | 8,956,380 - 9,021,831 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 3 | 8,956,679 - 9,022,131 (+) | NCBI | | | | | Celera | 3 | 8,018,277 - 8,083,081 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | p12 | NCBI | | | | |
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Sptan1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955570 | 1,016,510 - 1,076,499 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955570 | 1,016,510 - 1,076,499 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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SPTAN1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 11 | 10,718,343 - 10,799,503 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 9 | 10,720,693 - 10,801,863 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 9 | 99,674,819 - 99,755,973 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 9 | 128,341,739 - 128,422,971 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 9 | 128,341,739 - 128,422,971 (+) | Ensembl | panpan1.1 | | panPan2 | |
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SPTAN1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 9 | 54,953,751 - 55,015,475 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 9 | 54,953,747 - 55,015,376 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 9 | 54,149,445 - 54,211,133 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 9 | 55,876,077 - 55,937,766 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 9 | 55,876,080 - 55,937,760 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 9 | 54,635,563 - 54,694,357 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 9 | 54,949,366 - 55,011,369 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 9 | 55,041,985 - 55,103,647 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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SPTAN1 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 1 | 268,936,025 - 269,002,256 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 1 | 268,936,120 - 269,002,261 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 1 | 302,959,613 - 303,025,990 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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SPTAN1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 12 | 9,503,752 - 9,585,297 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 12 | 9,503,367 - 9,585,268 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666079 | 6,662,808 - 6,746,597 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Sptan1 (Heterocephalus glaber - naked mole-rat) |
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