Gene: RWDD2B (RWD domain containing 2B) Pan paniscus |
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Analyze |
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Symbol: |
RWDD2B |
Name: |
RWD domain containing 2B |
RGD ID: |
11975201 |
Description: |
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Type: |
protein-coding
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RefSeq Status: |
MODEL |
Previously known as: |
RWD domain-containing protein 2B |
RGD Orthologs |
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Alliance Orthologs |
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More Info |
more info ...
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More Info |
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Latest Assembly: |
Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly |
Position: |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 22 | 25,187,346 - 25,205,772 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 21 | 20,046,181 - 20,063,361 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 21 | 15,436,922 - 15,451,135 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 21 | 28,825,419 - 28,838,801 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 21 | 28,825,419 - 28,838,801 (-) | Ensembl | panpan1.1 | | panPan2 | |
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JBrowse: |
View Region in Genome Browser (JBrowse)
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Model |
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References
Additional References at PubMed
Genomics
Comparative Map Data
RWDD2B (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 22 | 25,187,346 - 25,205,772 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 21 | 20,046,181 - 20,063,361 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 21 | 15,436,922 - 15,451,135 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 21 | 28,825,419 - 28,838,801 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 21 | 28,825,419 - 28,838,801 (-) | Ensembl | panpan1.1 | | panPan2 | |
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RWDD2B (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 21 | 29,004,384 - 29,019,349 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 21 | 29,004,384 - 29,019,360 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 21 | 30,376,705 - 30,391,670 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 21 | 29,299,951 - 29,313,563 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 21 | 29,299,952 - 29,313,554 | NCBI | | | | | Celera | 21 | 15,560,812 - 15,575,163 (-) | NCBI | | Celera | | | Cytogenetic Map | 21 | q21.3 | NCBI | | | | | HuRef | 21 | 15,782,744 - 15,798,035 (-) | NCBI | | HuRef | | | CHM1_1 | 21 | 29,940,417 - 29,954,042 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 21 | 27,367,085 - 27,382,803 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Rwdd2b (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 16 | 87,230,219 - 87,237,480 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 16 | 87,230,295 - 87,237,461 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 16 | 87,433,331 - 87,440,592 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 16 | 87,433,407 - 87,440,573 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 16 | 87,433,576 - 87,440,837 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 16 | 87,322,605 - 87,329,742 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 16 | 87,625,667 - 87,629,850 (-) | NCBI | | Celera | | | Cytogenetic Map | 16 | C3.3 | NCBI | | | | | cM Map | 16 | 49.53 | NCBI | | | | |
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Rwdd2b (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 11 | 40,152,139 - 40,166,328 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 11 | 26,665,877 - 26,677,986 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 11 | 26,665,877 - 26,674,603 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 11 | 35,363,925 - 35,372,538 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 11 | 28,064,170 - 28,072,783 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 11 | 27,253,104 - 27,261,717 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 11 | 27,085,708 - 27,094,364 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 11 | 27,085,711 - 27,094,364 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 11 | 30,711,156 - 30,719,812 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 11 | 27,189,244 - 27,197,900 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 11 | 27,190,414 - 27,192,840 (-) | NCBI | | | | | Celera | 11 | 26,418,325 - 26,426,990 (-) | NCBI | | Celera | | | Cytogenetic Map | 11 | q11 | NCBI | | | | |
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Rwdd2b (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955407 | 28,359,487 - 28,371,678 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955407 | 28,363,476 - 28,371,491 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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RWDD2B (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 31 | 24,017,573 - 24,034,230 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 31 | 24,018,397 - 24,031,147 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 31 | 24,010,513 - 24,027,355 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 31 | 24,131,144 - 24,148,011 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 31 | 24,131,418 - 24,144,988 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 31 | 24,081,547 - 24,098,464 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 31 | 24,083,221 - 24,100,166 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 31 | 24,554,706 - 24,571,592 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Rwdd2b (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024404971 | 24,466,941 - 24,478,806 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936500 | 12,991,167 - 13,001,053 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936500 | 12,989,064 - 13,000,582 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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LTN1 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 13 | 192,363,970 - 192,373,946 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 13 | 192,359,972 - 192,374,354 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 13 | 202,667,551 - 202,676,583 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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RWDD2B (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 2 | 63,206,863 - 63,213,752 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 2 | 63,206,876 - 63,216,793 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666071 | 5,791,926 - 5,799,949 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Rwdd2b (Heterocephalus glaber - naked mole-rat) |
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Expression
Sequence
RefSeq Acc Id: |
ENSPPAT00000018571 ⟹ ENSPPAP00000003989 |
Type: |
CODING |
Position: |
Bonobo Assembly | Chr | Position (strand) | Source |
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PanPan1.1 Ensembl | 21 | 28,825,419 - 28,838,801 (-) | Ensembl |
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RefSeq Acc Id: |
XM_003813187 ⟹ XP_003813235 |
Type: |
CODING |
Position: |
Bonobo Assembly | Chr | Position (strand) | Source |
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NHGRI_mPanPan1-v2 | 22 | 25,187,346 - 25,205,772 (-) | NCBI | NHGRI_mPanPan1 | 21 | 20,046,181 - 20,063,361 (-) | NCBI | Mhudiblu_PPA_v0 | 21 | 15,436,922 - 15,451,135 (-) | NCBI | PanPan1.1 | 21 | 28,825,419 - 28,838,801 (-) | NCBI |
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Sequence: |
ATGCGCCGCATGTCTTTTTTTTTTTTTTTTTTTTCCGGTTAGGTCGCCAGCTGAGGCGGTTTGT AAGTTTTGGGTCTCAGTATGCTAGAATTTTGAGGCTCCCTTCTGATGAAAATTGAGCTGTCCAT GCAGCCATGGAACCCGGGTTACAGCAGTGAGGGGGCCACGGCTCAAGAAACTTACACATGTCCA AAAATGATTGAGATAGAGCAGGCGGAGGCCCAGCTTGCTGAGTTAGACCTGCTAGCCAGTATGT TCCCTGGTGAGAATGAGCTCATAGTGAATGACCAGCTGGCTGTAGCAGAACTGAAAGATTGTAT TGAAAAGAAGACAATGGAGGGGCGATCTTCAAAAGTCTACTTTACTATCAATATGAACCTGGAT GTATCTGATGAAAAAATGGCGATGTTTTCTCTGGCCTGTATTCTTCCCTTTAAATACCCGGCAG TTCTGCCTGAAATTACTGTCAGATCAGTATTATTGAGTAGATCCCAGCAGACTCAGCTGAACAC AGATCTGACTGCATTCCTGCAAAAACATTGTCATGGAGATGTTTGTATACTGAATGCCACAGAG TGGGTTAGAGAACACGCCTCTGGCTATGTCAGCAGAGATACTTCATCTTCACCCACCACAGGAA GCACAGTCCAGTCAGTTGACCTCATCTTCACGAGACTCTGGATCTACAGCCATCATATCTATAA CAAATGCAAAAGAAAGAATATTCTAGAGTGGTCAAAGGAGCTTTCCCTGTCTGGGTTTAGCATG CCTGGAAAACCTGGTGTTGTTTGTGTGGAAGGCCCACAAAGTGCCTGTGAAGAATTCTGGTCAA GACTCAGAAAATTAAACTGGAAGAGAATTTTAATTCGCCATCGAGAAGACATTCCTTTTGATGG TACAAATGATGAAATGGAAAGACAAAGGAAATTTTCCATTTTTGAAGAAAAAGTGTTCAGTGTT AATGGAGCCAGGGGAAACCACATGGACTTTGGTCAGCTCTATCAGTTCTTAAACACCAAAGGAT GTGGGGATGTTTTCCAGATGTTCCTTGGTGTAGAAGGACAATGACATCAAGAGTAGTTGAAAGT ATCTTGCCACTGTTGGCCTTTTGATTTTTTTTTCCCACTTTTTCTTGAAAGATTAAGTAATTTT ATTTTAGTTCCATTCTAGAATGTTGGGGAGTGGGGCACAAGAAAAAATAGTATAGCTGAAATGC ATCTGTTAAAAATGTCATGATTGAAAGCAGAACTGAGTTACAAATTACAACCTTAAAATTGTTG TTAGATATTTCTTCACATATCAGCTGCCCATTTTGAAAAAGAAATTATCCATAAAGGTAATGTT GGTGCTCCAATTTGCCAGCCATTCCCAACCCCCTTCTCCCTTACCTGCCTTCACTAAAGAACCC AGAAAAGCTAATTGCTCCCCTTTCAGCCTCTGTTGCAACTAACAACTCTCAGTGGCCTCAGGAC ACAGCTTTGGCCTTGGGAATTCTGGGAAAACTTTTACTTCCTGATTAAAGATACATATGCAGCT AGGCCACCTCCTCCCCCCCTTACTGCCATAAACACCAAAGTGATGACTGGAGCTGGAGGAGTTA TTTGAACCATGACAGAAGGAAGGGCCAAGAGAACCACGAAGATGCCAGTTGCCACATTGTTGAG CTGCTGACCCAACACCAGCCATTGCCTGTCTCTAAACGTCTTATGAAATAAAACCAGTTTTGTT TAA
hide sequence
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RefSeq Acc Id: |
XM_063601384 ⟹ XP_063457454 |
Type: |
CODING |
Position: |
Bonobo Assembly | Chr | Position (strand) | Source |
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NHGRI_mPanPan1-v2 | 22 | 25,187,346 - 25,201,264 (-) | NCBI |
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RefSeq Acc Id: |
XM_063601385 ⟹ XP_063457455 |
Type: |
CODING |
Position: |
Bonobo Assembly | Chr | Position (strand) | Source |
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NHGRI_mPanPan1-v2 | 22 | 25,187,346 - 25,201,264 (-) | NCBI |
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RefSeq Acc Id: |
XP_003813235 ⟸ XM_003813187 |
- Peptide Label: |
isoform X1 |
- UniProtKB: |
A0A2R8ZG70 (UniProtKB/TrEMBL) |
- Sequence: |
MKIELSMQPWNPGYSSEGATAQETYTCPKMIEIEQAEAQLAELDLLASMFPGENELIVNDQLAV AELKDCIEKKTMEGRSSKVYFTINMNLDVSDEKMAMFSLACILPFKYPAVLPEITVRSVLLSRS QQTQLNTDLTAFLQKHCHGDVCILNATEWVREHASGYVSRDTSSSPTTGSTVQSVDLIFTRLWI YSHHIYNKCKRKNILEWSKELSLSGFSMPGKPGVVCVEGPQSACEEFWSRLRKLNWKRILIRHR EDIPFDGTNDEMERQRKFSIFEEKVFSVNGARGNHMDFGQLYQFLNTKGCGDVFQMFLGVEGQ
hide sequence
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RefSeq Acc Id: |
ENSPPAP00000003989 ⟸ ENSPPAT00000018571 |
RefSeq Acc Id: |
XP_063457455 ⟸ XM_063601385 |
- Peptide Label: |
isoform X2 |
RefSeq Acc Id: |
XP_063457454 ⟸ XM_063601384 |
- Peptide Label: |
isoform X2 |
Additional Information
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